# terms

id: PBO:0071357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 16","termid":"PBO:0071357"}


id: GO:0008449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate.","definition_xrefs":["EC:3.1.6.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"N-acetylglucosamine-6-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.14-RXN","Reactome:R-HSA-2263495","Reactome:R-HSA-1638032"],"synonyms":[{"name":"2-acetamido-2-deoxy-D-glucose 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetyl-D-glucosamine-6-sulfate 6-sulfohydrolase activity","type":"related"},{"name":"N-acetylglucosamine 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetylglucosamine-6-sulphatase activity","type":"exact"},{"name":"O,N-disulfate O-sulfohydrolase activity","type":"related"},{"name":"acetylglucosamine 6-sulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"glucosamine-6-sulfatase activity","type":"related"}],"termid":"GO:0008449"}


id: PBO:0013469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6","termid":"PBO:0013469"}


id: PBO:0079309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4B","termid":"PBO:0079309"}


id: PBO:0018270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrs1","termid":"PBO:0018270"}


id: MONDO:0016106
data:
  {"annotated_genes":["SJAG_01491","SJAG_04003","SJAG_01939","SJAG_03188","SJAG_04601","SJAG_04316","SJAG_03145","SJAG_04228","SJAG_04053","SJAG_03715","SJAG_02043","SJAG_03470","SJAG_02396","SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[86144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"},{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87019,87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[86236,86237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[86506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"},{"annotations":[87119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[86920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957270"},{"annotations":[86598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011266"},{"annotations":[85977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014800"},{"annotations":[85797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_01939":null,"SJAG_02043":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_03145":null,"SJAG_03188":null,"SJAG_03470":null,"SJAG_03703":null,"SJAG_03715":null,"SJAG_04003":null,"SJAG_04053":null,"SJAG_04228":null,"SJAG_04316":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"progressive muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1633060","Orphanet:206644","GARD:20360","UMLS:C4551827"],"synonyms":[{"name":"progressive muscular dystrophy","type":"exact"}],"termid":"MONDO:0016106","terms_by_termid":{"MONDO:0008030":null,"MONDO:0008409":null,"MONDO:0010684":null,"MONDO:0010912":null,"MONDO:0011266":null,"MONDO:0012034":null,"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null,"MONDO:0014800":null,"MONDO:0021018":null,"MONDO:0957270":null,"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0016106"}}}


id: MONDO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus haemophilus.","definition_xrefs":["MESH:D006192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haemophilus infectious disease","secondary_identifiers":["SCTID:41659003","EFO:1001127","NCIT:C34654"],"synonyms":[{"name":"Haemophilus caused disease or disorder","type":"exact"},{"name":"Haemophilus disease or disorder","type":"exact"},{"name":"Haemophilus infection","type":"related"},{"name":"Haemophilus infectious disease","type":"exact"},{"name":"Hemophilus infection","type":"related"},{"name":"Hemophilus infections","type":"related"},{"name":"haemophilus infectious disease","type":"exact"},{"name":"infection, Haemophilus","type":"related"},{"name":"infection, Hemophilus","type":"related"},{"name":"infections, Haemophilus","type":"related"},{"name":"infections, Hemophilus","type":"related"}],"termid":"MONDO:0006926","xrefs":{"Monarch":{"xref_id":"0006926"}}}


id: PBO:0005683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp1","termid":"PBO:0005683"}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: PBO:0080454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 1","termid":"PBO:0080454"}


id: PBO:0046757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exo/endonuclease G","termid":"PBO:0046757"}


id: PBO:0053168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoid enhancer binding factor 1","termid":"PBO:0053168"}


id: PR:Q9P6K0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1527.03 gene.","definition_xrefs":["UniProtKB:Q9P6K0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized HTH La-type RNA-binding protein C1527.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.03","synonyms":[{"name":"Spom972h-SPAC1527.03","type":"exact"}],"termid":"PR:Q9P6K0"}


id: GO:1905468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of clathrin-coated pit assembly (obsolete GO:1905468)","synonyms":[{"name":"regulation of clathrin-coated pit formation","type":"exact"},{"name":"regulation of coated pit assembly","type":"exact"},{"name":"regulation of coated pit formation","type":"exact"}],"termid":"GO:1905468"}


id: GO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure contributing to an acute inflammatory response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation involved in acute inflammatory response","synonyms":[{"name":"vasodilation during acute inflammatory response","type":"related"}],"termid":"GO:0002527"}


id: GO:0046821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal DNA","secondary_identifiers":["Wikipedia:Extrachromosomal_DNA"],"termid":"GO:0046821"}


id: PBO:0077783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I pseudogene 1","termid":"PBO:0077783"}


id: PBO:0114072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily A member 2, pseudogene","termid":"PBO:0114072"}


id: PBO:0068300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 6","termid":"PBO:0068300"}


id: PBO:0017960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ornithine transmembrane transporter Ort1 (predicted)","termid":"PBO:0017960"}


id: FYPO:0005273
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119432,119410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[119849,119850,119851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a cell cycle phase transition normally.","definition_xrefs":["GO:0044770","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_01330","SJAG_03575"],"single_locus_genotype_uniquenames":["mad2delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005273","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: GO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organofluorine metabolic process","termid":"GO:0090348"},{"relation_name":"is_a","term_name":"negative regulation of organohalogen metabolic process","termid":"GO:0090349"},{"relation_name":"negatively_regulates","term_name":"organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organofluorine metabolic process","termid":"GO:0090350"}


id: PBO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein (fungal and protazoan)","termid":"PBO:0000934"}


id: GO:0099160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intermediate filament cytoskeleton that is part of a postsynapse.","definition_xrefs":["GOC:dos","PMID:25869803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic intermediate filament cytoskeleton","termid":"GO:0099160"}


id: PBO:0112858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_gene","termid":"PBO:0112858"}


id: GO:0044441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:jl","GOC:cilia"],"gene_count":0,"genotype_count":0,"name":"obsolete ciliary part (obsolete GO:0044441)","synonyms":[{"name":"cilial part","type":"exact"},{"name":"cilium part","type":"exact"},{"name":"flagellar part","type":"narrow"},{"name":"flagellum component","type":"narrow"},{"name":"flagellum part","type":"narrow"},{"name":"microtubule-based flagellum part","type":"exact"}],"termid":"GO:0044441"}


id: MONDO:0007168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skeletal dysplasia characterized by short limbs dysmorphic facies and diagnostic radiographic findings.","definition_xrefs":["Orphanet:56305"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis type III","secondary_identifiers":["UMLS:C3668942","MESH:C579928","MEDGEN:777149","GARD:10608","icd11.foundation:1997882528","OMIM:108721","SCTID:725142004"],"synonyms":[{"name":"AO3","type":"exact"},{"name":"AOIII","type":"exact"},{"name":"Aoiii","type":"related"},{"name":"atelosteogenesis type 3","type":"exact"},{"name":"atelosteogenesis, type 3","type":"related"},{"name":"atelosteogenesis, type III","type":"related"}],"termid":"MONDO:0007168","xrefs":{"Monarch":{"xref_id":"0007168"}}}


id: FYPO:0000558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle after pheromone arrest is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal re-entry into mitotic cell cycle after pheromone arrest","termid":"FYPO:0000555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"increased recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: increased","type":"related"}],"termid":"FYPO:0000558"}


id: PBO:0075676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spexin hormone","termid":"PBO:0075676"}


id: GO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral organ are generated and organized.","definition_xrefs":["GOC:go_curators","GOC:PO_curators","PO:0025395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ morphogenesis","secondary_identifiers":["GO:0048434"],"termid":"GO:0048444"}


id: MONDO:0008825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita-whistling face syndrome is an extremely rare type of arthrogryposis multiplex congenita characterized by the combination of multiple joint contractures with movement limitation, microstomia with a whistling appearance of the mouth that may cause feeding, swallowing, and speech difficulties, a distinctive expressionless facies, severe developmental delay, central and autonomous nervous system dysfunction (excessive salivation, temperature instability, myoclonic epileptic fits, bradycardia), occasionally Pierre-Robin sequence, and lethality generally occurring during the first months of life. Arthrogryposis multiplex congenita-whistling face syndrome has been suggested to be a fetal akinesia deformation sequence.","definition_xrefs":["Orphanet:1150"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita-whistling face syndrome","secondary_identifiers":["MESH:C538401","GARD:792","OMIM:208155","SCTID:720514008","MEDGEN:349231","UMLS:C1859711"],"synonyms":[{"name":"ILLUM syndrome","type":"related"},{"name":"Illum syndrome","type":"exact"},{"name":"arthrogryposis multiplex congenita whistling face","type":"related"},{"name":"arthrogryposis, whistling face, and developintellectual disability","type":"related"},{"name":"arthrogryposis, whistling face, and developmental retardation","type":"related"},{"name":"lethal autosomal recessive arthrogryposis multiplex congenita with whistling face and calcifications of the nervous system","type":"related"}],"termid":"MONDO:0008825","xrefs":{"Monarch":{"xref_id":"0008825"}}}


id: MONDO:0003082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"filamentary keratitis","secondary_identifiers":["ICD9:370.23","UMLS:C0155077","DOID:4664","MEDGEN:509773","icd11.foundation:942510664","SCTID:51286002"],"termid":"MONDO:0003082","xrefs":{"Monarch":{"xref_id":"0003082"}}}


id: PBO:0042296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD5 molecule like","termid":"PBO:0042296"}


id: MONDO:0008194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paramolar tubercle of bolk","secondary_identifiers":["SCTID:78305006","UMLS:C0266029","MEDGEN:539640","OMIM:168200"],"synonyms":[{"name":"Paramolar tubercle of bolk","type":"exact"},{"name":"bolk cusp","type":"related"}],"termid":"MONDO:0008194","xrefs":{"Monarch":{"xref_id":"0008194"}}}


id: PBO:0058386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4758","termid":"PBO:0058386"}


id: SO:1001195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_greater_than_1_polypeptide","termid":"SO:1001189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_overlapping_peptides","synonyms":[{"name":"encodes overlapping peptides","type":"exact"}],"termid":"SO:1001195"}


id: PBO:0041466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 126","termid":"PBO:0041466"}


id: GO:1902590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An organelle organization which involves another organism.","definition_xrefs":["GOC:TermGenie","GO_REF:0000089","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism organelle organization (obsolete GO:1902590)","synonyms":[{"name":"multi organism organelle organization","type":"exact"}],"termid":"GO:1902590"}


id: PBO:0062531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily X member 1 pseudogene","termid":"PBO:0062531"}


id: PBO:0053280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin-like receptor pseudogene 1","termid":"PBO:0053280"}


id: FYPO:0004721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0036078","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased rate of microtubule depolymerization at minus end (obsolete FYPO:0004721)","synonyms":[{"name":"decreased microtubule depolymerization rate at minus end","type":"exact"},{"name":"decreased microtubule minus end shrinkage","type":"related"},{"name":"decreased rate of microtubule catastrophe at minus end","type":"related"},{"name":"decreased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"decreased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"decreased rate of minus-end specific microtubule depolymerization","type":"exact"},{"name":"increased microtubule stability","type":"related"},{"name":"reduced rate of microtubule depolymerization at minus end","type":"exact"}],"termid":"FYPO:0004721"}


id: MONDO:0035678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical Timothy syndrome with cutaneous syndactyly.","direct_ancestors":[{"relation_name":"is_a","term_name":"Timothy syndrome, classic type","termid":"MONDO:0021171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Timothy syndrome type 1","secondary_identifiers":["MEDGEN:1802409","UMLS:C5574939","Orphanet:595098","GARD:22380","ICD10CM:I49.8"],"synonyms":[{"name":"LQT8 type 1","type":"exact"},{"name":"TS1","type":"exact"}],"termid":"MONDO:0035678","xrefs":{"Monarch":{"xref_id":"0035678"}}}


id: MONDO:0017384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A widespread acute rash characterized by fever and multiple small pustules on a reddish background.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute generalized exanthematous pustulosis","secondary_identifiers":["MEDGEN:209091","GARD:21164","MedDRA:10048799","Orphanet:293173","UMLS:C0877055","ICD9:709.8","NCIT:C112122","SCTID:702617007","MESH:D056150"],"synonyms":[{"name":"AGEP","type":"exact"},{"name":"pustular drug eruption","type":"exact"},{"name":"toxic pustuloderma","type":"exact"}],"termid":"MONDO:0017384","xrefs":{"Monarch":{"xref_id":"0017384"}}}


id: FYPO:0003924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured at arrested replication forks in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at stalled replication fork","synonyms":[{"name":"increased DNA damage at arrested replication fork","type":"exact"},{"name":"increased DNA damage at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"increased DNA damage at stalled replication fork during vegetative growth","type":"exact"},{"name":"increased number of DNA lesions at stalled replication forks during vegetative growth","type":"related"}],"termid":"FYPO:0003924"}


id: PBO:0036053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere_during_vegetative_growth","termid":"PBO:0036053"}


id: GO:1900654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of demethylkotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of demethylkotanin biosynthetic process","termid":"GO:1900652"},{"relation_name":"positively_regulates","term_name":"demethylkotanin biosynthetic process","termid":"GO:1900599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of demethylkotanin biosynthetic process","synonyms":[{"name":"activation of demethylkotanin anabolism","type":"exact"},{"name":"activation of demethylkotanin biosynthesis","type":"exact"},{"name":"activation of demethylkotanin biosynthetic process","type":"narrow"},{"name":"activation of demethylkotanin formation","type":"exact"},{"name":"activation of demethylkotanin synthesis","type":"exact"},{"name":"positive regulation of demethylkotanin anabolism","type":"exact"},{"name":"positive regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"positive regulation of demethylkotanin formation","type":"exact"},{"name":"positive regulation of demethylkotanin synthesis","type":"exact"},{"name":"up regulation of demethylkotanin anabolism","type":"exact"},{"name":"up regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"up regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"up regulation of demethylkotanin formation","type":"exact"},{"name":"up regulation of demethylkotanin synthesis","type":"exact"},{"name":"up-regulation of demethylkotanin anabolism","type":"exact"},{"name":"up-regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"up-regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"up-regulation of demethylkotanin formation","type":"exact"},{"name":"up-regulation of demethylkotanin synthesis","type":"exact"},{"name":"upregulation of demethylkotanin anabolism","type":"exact"},{"name":"upregulation of demethylkotanin biosynthesis","type":"exact"},{"name":"upregulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"upregulation of demethylkotanin formation","type":"exact"},{"name":"upregulation of demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900654"}


id: GO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-threonine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine modification","termid":"GO:0018210"}


id: PBO:0044242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutA divalent cation tolerance like, pseudogene","termid":"PBO:0044242"}


id: MONDO:0030885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis 26 with or without frontotemporal dementia","secondary_identifiers":["UMLS:C5436882","DOID:0081380","OMIM:619133","GARD:16425","MEDGEN:1771903"],"synonyms":[{"name":"ALS26","type":"exact"}],"termid":"MONDO:0030885","xrefs":{"Monarch":{"xref_id":"0030885"}}}


id: PBO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with possible role in spore wall assembly; predicted to contain an N-terminal transmembrane domain; osw5 null mutant spores exhibit increased spore wall permeability and sensitivity to beta-glucanase digestion","termid":"PBO:0086076"}


id: GO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by a neurotransmitter. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}


id: GO:0090650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.","definition_xrefs":["GOC:sl","PMID:21525936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"},{"relation_name":"is_a","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"},{"relation_name":"is_a","term_name":"response to oxygen-glucose deprivation","termid":"GO:0090649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen-glucose deprivation","synonyms":[{"name":"cellular response to OGD","type":"exact"}],"termid":"GO:0090650"}


id: GO:0009112
data:
  {"annotated_genes":["SJAG_00694","SJAG_01081","SJAG_01814","SJAG_05024","SJAG_02593","SJAG_00964","SJAG_00197","SJAG_00779","SJAG_06634","SJAG_03708","SJAG_01070","SJAG_04299","SJAG_04709","SJAG_04354","SJAG_04297","SJAG_00444","SJAG_04300","SJAG_01673","SJAG_05287","SJAG_01859","SJAG_01997","SJAG_03140","SJAG_03164","SJAG_00392","SJAG_02364","SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70358,57568,70085,74337,71971,73720,72277,88129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[117655,71015,110676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[98134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046083"},{"annotations":[74301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[68408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[75995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046100"},{"annotations":[60146,114809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[73864,92114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[75653,70238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006144"},{"annotations":[89536,74840,115218,87807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006206"},{"annotations":[92310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"},{"annotations":[117659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01673":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01997":null,"SJAG_02364":null,"SJAG_02593":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04300":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_05024":null,"SJAG_05287":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleobase metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase metabolism","type":"exact"}],"termid":"GO:0009112","terms_by_termid":{"GO:0006144":null,"GO:0006145":null,"GO:0006147":null,"GO:0006168":null,"GO:0006206":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0009115":null,"GO:0046083":null,"GO:0046084":null,"GO:0046100":null}}


id: PBO:0117244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl tRNA hydrolase, stalled-ribosome rescue factor srRF1, Pth4","termid":"PBO:0117244"}


id: GO:0034863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-1-pentanol = 2,4,4-trimethylpentanal + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-1-pentanol dehydrogenase activity (obsolete GO:0034863)","termid":"GO:0034863"}


id: MONDO:0012781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 12","secondary_identifiers":["OMIM:612010","MEDGEN:436989","UMLS:C2677602"],"synonyms":[{"name":"CELIAC12","type":"exact"},{"name":"celiac disease, susceptibility to, 12","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 12","type":"related"}],"termid":"MONDO:0012781","xrefs":{"Monarch":{"xref_id":"0012781"}}}


id: GO:2000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA export from nucleus","termid":"GO:0046832"},{"relation_name":"is_a","term_name":"negative regulation of ribonucleoprotein complex localization","termid":"GO:2000198"},{"relation_name":"is_a","term_name":"regulation of tRNA export from nucleus","termid":"GO:2000238"},{"relation_name":"negatively_regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"negative regulation of tRNA export from nucleus","synonyms":[{"name":"negative regulation of tRNA export from cell nucleus","type":"exact"},{"name":"negative regulation of tRNA export out of nucleus","type":"exact"},{"name":"negative regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000239"}


id: GO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycerol ether biosynthetic process","synonyms":[{"name":"glycerol ether anabolism","type":"exact"},{"name":"glycerol ether biosynthesis","type":"exact"},{"name":"glycerol ether formation","type":"exact"},{"name":"glycerol ether synthesis","type":"exact"}],"termid":"GO:0046504"}


id: PR:Q9C0W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial membrane protein C800.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.14c","synonyms":[{"name":"Spom972h-SPBC800.14c","type":"exact"}],"termid":"PR:Q9C0W5"}


id: MONDO:1011728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G2 deficiency, non-human animal","secondary_identifiers":["OMIA:000555"],"termid":"MONDO:1011728","xrefs":{"Monarch":{"xref_id":"1011728"}}}


id: MONDO:0006519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the rectum. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C7418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectal cancer","secondary_identifiers":["ICD9:154.1","MEDGEN:181763","SCTID:363351006","UMLS:C0949022","DOID:1993","EFO:1000657"],"synonyms":[{"name":"cancer of rectum","type":"exact"},{"name":"carcinoma of rectum","type":"broad"},{"name":"carcinoma of the rectum","type":"broad"},{"name":"malignant neoplasm of rectum","type":"exact"},{"name":"malignant neoplasm of the rectum","type":"exact"},{"name":"malignant rectal neoplasm","type":"exact"},{"name":"malignant rectal tumor","type":"exact"},{"name":"malignant rectal tumour","type":"exact"},{"name":"malignant rectum neoplasm","type":"exact"},{"name":"malignant rectum tumor","type":"exact"},{"name":"malignant rectum tumour","type":"exact"},{"name":"malignant tumor of rectum","type":"exact"},{"name":"malignant tumor of the rectum","type":"exact"},{"name":"malignant tumour of rectum","type":"exact"},{"name":"malignant tumour of the rectum","type":"exact"},{"name":"rectal cancer","type":"exact"},{"name":"rectum cancer","type":"exact"}],"termid":"MONDO:0006519","xrefs":{"Monarch":{"xref_id":"0006519"}}}


id: GO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclohexane-1-carboxylate, a alicyclic acid, in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic cyclohexane-1-carboxylate catabolic process","secondary_identifiers":["MetaCyc:PWY-301"],"synonyms":[{"name":"anaerobic cyclohexane-1-carboxylate breakdown","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate catabolism","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0010129"}


id: PBO:0072597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"round spermatid basic protein 1 like","termid":"PBO:0072597"}


id: PBO:0047945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(q22.1)","termid":"PBO:0047945"}


id: GO:0140984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H4 L-lysine (position 12) = S-adenosyl-L-homocysteine + histone H4 N6-methyl-L-lysine (position 12). This reaction is the addition of a methyl group to the lysine residue at position 12 of the histone H4 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016741","GO:0008276","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H4K12 methyltransferase activity","synonyms":[{"name":"histone H4 lysine 12-specific methyltransferase activity","type":"exact"},{"name":"histone H4K12 methylase activity","type":"broad"},{"name":"histone H4K12 methylation","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone methylase activity (H4-K12 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone-H4K12 methyltransferase activity","type":"exact"}],"termid":"GO:0140984"}


id: PBO:0053626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 670","termid":"PBO:0053626"}


id: PBO:0058172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4467","termid":"PBO:0058172"}


id: MONDO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with perivascular epithelioid cell differentiation arising from the uterine corpus wall.","definition_xrefs":["NCIT:C40180"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"mixed endometrial stromal and smooth muscle tumor","termid":"MONDO:0004526"},{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus perivascular epithelioid cell tumor","secondary_identifiers":["DOID:7437","UMLS:C1519862","MEDGEN:276940","ONCOTREE:UPECOMA"],"synonyms":[{"name":"body of uterus neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"uterine corpus PEComa","type":"exact"},{"name":"uterine corpus perivascular epithelioid cell tumor","type":"exact"},{"name":"uterine perivascular epithelioid cell tumor","type":"related"},{"name":"uterine perivascular epithelioid cell tumour","type":"related"},{"name":"uterus perivascular epithelioid cell tumor","type":"related"},{"name":"uterus perivascular epithelioid cell tumour","type":"related"}],"termid":"MONDO:0004221","xrefs":{"Monarch":{"xref_id":"0004221"}}}


id: GO:1902846
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90342,94749],"is_not":false,"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"positively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000070"],"is_obsolete":false,"name":"positive regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic spindle elongation","type":"narrow"},{"name":"activation of spindle elongation during mitosis","type":"narrow"},{"name":"positive regulation of spindle elongation during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle elongation","type":"exact"},{"name":"up regulation of spindle elongation during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle elongation","type":"exact"},{"name":"up-regulation of spindle elongation during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle elongation","type":"exact"},{"name":"upregulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902846","terms_by_termid":{"GO:1902846":null}}


id: FYPO:0009080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of calcofluor and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of calcofluor and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to calcofluor and SDS","type":"exact"},{"name":"hypersensitive to calcofluor and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to calcofluor and SDS","type":"exact"},{"name":"sensitive to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"sensitive to calcofluor and SDS in combination","type":"exact"},{"name":"sensitive to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to calcofluor and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009080"}


id: MONDO:0006346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the pancreas. It is characterized by the presence of relatively uniform malignant cells which form acinar patterns. It usually occurs during adulthood. Signs and symptoms include abdominal pain, weight loss, nausea, and diarrhea. It may metastasize to regional lymph nodes and the liver. A minority of patients develop lipase hypersecretion syndrome. This syndrome may be seen in patients with liver metastases and it is characterized by excessive secretion of lipase in the serum, polyarthralgia, and subcutaneous fat necrosis.","definition_xrefs":["NCIT:C7977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acinar cell carcinoma","termid":"MONDO:0004965"},{"relation_name":"is_a","term_name":"pancreatic adenocarcinoma","termid":"MONDO:0006047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic acinar cell carcinoma","secondary_identifiers":["EFO:1000439","DOID:5742","ONCOTREE:PAAC","UMLS:C0279661","MEDGEN:83540","Orphanet:424046","GARD:21777"],"synonyms":[{"name":"PAAC","type":"related"},{"name":"Pancreatic acinar cell cancer","type":"exact"},{"name":"acinar cell adenocarcinoma of pancreas","type":"exact"},{"name":"acinar cell adenocarcinoma of the pancreas","type":"exact"},{"name":"acinar cell carcinoma of pancreas","type":"exact"},{"name":"acinar cell carcinoma of the pancreas","type":"exact"},{"name":"carcinoma of pancreatic acinar cell","type":"exact"},{"name":"pancreas acinar cell adenocarcinoma","type":"exact"},{"name":"pancreatic acinar cell adenocarcinoma","type":"exact"},{"name":"pancreatic acinar cell carcinoma","type":"exact"}],"termid":"MONDO:0006346","xrefs":{"Monarch":{"xref_id":"0006346"}}}


id: GO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction. For example, some viruses are able to activate host autophagy as a cellular survival mechanism, hence delaying or inhibiting apoptosis.","definition_xrefs":["GOC:sp","VZ:846","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","secondary_identifiers":["GO:0075044"],"synonyms":[{"name":"activation of host autophagy by virus","type":"exact"},{"name":"autophagy of host cells involved in interaction with symbiont","type":"related"},{"name":"induction by virus of host autophagy","type":"narrow"},{"name":"positive regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039520"}


id: MONDO:0015612
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"}]},"cv_name":"mondo","definition":"Dent disease is a rare genetic renal tubular disease characterized by manifestations of proximal tubule dysfunction.","definition_xrefs":["Orphanet:1652"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rickets","termid":"MONDO:0005520"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Dent disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:13105","NCIT:C123260","icd11.foundation:1762998355","MedDRA:10069199","NORD:1040","UMLS:C0878681","MEDGEN:168056","DOID:0050699","MESH:D057973","SCTID:444645005","OMIMPS:300009"],"synonyms":[{"name":"Dent disease 1","type":"narrow"},{"name":"Dent disease 2","type":"narrow"},{"name":"Dent syndrome","type":"exact"},{"name":"Dent's disease","type":"exact"},{"name":"Dents disease","type":"related"},{"name":"X-linked recessive hypercalciuric hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive nephrolithiasis","type":"exact"},{"name":"low-molecular-weight proteinuria with hypercalciuria and nephrocalcinosis","type":"exact"},{"name":"renal Fanconi syndrome with nephrocalcinosis and renal stones","type":"exact"}],"termid":"MONDO:0015612","terms_by_termid":{"MONDO:0010359":null},"xrefs":{"Monarch":{"xref_id":"0015612"}}}


id: PBO:0088840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaculoar proteinase B inhibitor Pbi2","termid":"PBO:0088840"}


id: GO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxoadipate enol-lactone + H2O = 3-oxoadipate.","definition_xrefs":["MetaCyc:3-OXOADIPATE-ENOL-LACTONASE-RXN","EC:3.1.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-oxoadipate enol-lactonase activity","secondary_identifiers":["RHEA:10184"],"synonyms":[{"name":"3-ketoadipate enol-lactonase activity","type":"related"},{"name":"3-oxoadipic enol-lactone hydrolase activity","type":"related"},{"name":"4-carboxymethylbut-3-en-4-olide enol-lactonohydrolase activity","type":"related"},{"name":"beta-ketoadipate enol-lactone hydrolase activity","type":"related"},{"name":"beta-ketoadipic enol-lactone hydrolase activity","type":"related"},{"name":"carboxymethylbutenolide lactonase activity","type":"related"}],"termid":"GO:0047570"}


id: PBO:0081173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 16","termid":"PBO:0081173"}


id: MONDO:1011454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, non-human animal","secondary_identifiers":["OMIA:000754"],"termid":"MONDO:1011454","xrefs":{"Monarch":{"xref_id":"1011454"}}}


id: MONDO:0014338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"IL10-related early-onset inflammatory bowel disease","termid":"MONDO:0016542"},{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"IL21-related infantile inflammatory bowel disease","secondary_identifiers":["DOID:0081153","MEDGEN:1799211","Orphanet:477661","UMLS:C5567788","GARD:17852","NCIT:C176801","OMIM:615767"],"synonyms":[{"name":"CVID11","type":"related"},{"name":"IL21 deficiency","type":"related"},{"name":"IL21-related infantile IBD","type":"exact"},{"name":"immunodeficiency, common variable, 11","type":"related"},{"name":"immunodeficiency, common variable, type 11","type":"exact"}],"termid":"MONDO:0014338","xrefs":{"Monarch":{"xref_id":"0014338"}}}


id: PBO:0057545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 661","termid":"PBO:0057545"}


id: PBO:0045738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 1","termid":"PBO:0045738"}


id: GO:0036094
data:
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id: MONDO:0007199
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharochalasis, superior","secondary_identifiers":["MESH:C566223","UMLS:C1862275","OMIM:110000","MEDGEN:349465"],"synonyms":[{"name":"blepharochalasis, superior","type":"exact"}],"termid":"MONDO:0007199","xrefs":{"Monarch":{"xref_id":"0007199"}}}


id: PBO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (predicted)","termid":"PBO:0001783"}


id: GO:0042249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an embryonic epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:jl","GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity of embryonic epithelium","termid":"GO:0042249"}


id: GO:0047534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetolactate = 3-hydroxy-3-methyl-2-oxobutanoate.","definition_xrefs":["EC:5.4.99.3","MetaCyc:2-ACETOLACTATE-MUTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-acetolactate mutase activity","secondary_identifiers":["RHEA:16361"],"synonyms":[{"name":"2-acetolactate methylmutase activity","type":"related"},{"name":"acetohydroxy acid isomerase activity","type":"broad"},{"name":"acetolactate mutase activity","type":"related"}],"termid":"GO:0047534"}


id: GO:0019423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfur oxidation process that proceeds via the reaction catalyzed by sulfur:ferric ion oxidoreductase, and requires the presence of ferric ion (Fe3+).","definition_xrefs":["MetaCyc:FESULFOX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxidation","termid":"GO:0019417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfur oxidation, ferric ion-dependent","synonyms":[{"name":"sulphur oxidation, ferric ion-dependent","type":"exact"}],"termid":"GO:0019423"}


id: GO:0010795
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006744","GO:0044281"],"is_obsolete":false,"name":"regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010795","terms_by_termid":{"GO:1904775":null}}


id: PBO:0050473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A1","termid":"PBO:0050473"}


id: PBO:0029677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_morphology","termid":"PBO:0029677"}


id: GO:1904941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","GO_REF:0000059","GOC:BHF","PMID:23575307","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904941)","synonyms":[{"name":"activation of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"activation of TdT","type":"related"},{"name":"activation of addase activity","type":"narrow"},{"name":"activation of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of terminal addition enzyme activity","type":"related"},{"name":"activation of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"activation of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal transferase activity","type":"narrow"},{"name":"positive regulation of TdT","type":"related"},{"name":"positive regulation of addase activity","type":"exact"},{"name":"positive regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of terminal addition enzyme activity","type":"related"},{"name":"positive regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"positive regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal transferase activity","type":"exact"},{"name":"up regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of TdT","type":"related"},{"name":"up regulation of addase activity","type":"exact"},{"name":"up regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of terminal addition enzyme activity","type":"related"},{"name":"up regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal transferase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of TdT","type":"related"},{"name":"up-regulation of addase activity","type":"exact"},{"name":"up-regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of terminal addition enzyme activity","type":"related"},{"name":"up-regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up-regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal transferase activity","type":"exact"},{"name":"upregulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of TdT","type":"related"},{"name":"upregulation of addase activity","type":"exact"},{"name":"upregulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of terminal addition enzyme activity","type":"related"},{"name":"upregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"upregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904941"}


id: PBO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA, poly(A)-bearing RNA (predicted)","termid":"PBO:0000401"}


id: PBO:0067228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 299, pseudogene","termid":"PBO:0067228"}


id: MONDO:0021431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the buccal mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cheek mucosa cancer","termid":"MONDO:0004645"},{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of buccal mucosa","secondary_identifiers":["UMLS:C0280299","MEDGEN:83627","SCTID:254437001","NCIT:C4040"],"synonyms":[{"name":"buccal mucosa squamous cell carcinoma","type":"exact"},{"name":"scc of buccal mucosa","type":"exact"},{"name":"scc of the buccal mucosa","type":"exact"},{"name":"squamous cell carcinoma of the buccal mucosa","type":"exact"}],"termid":"MONDO:0021431","xrefs":{"Monarch":{"xref_id":"0021431"}}}


id: GO:0009706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"chloroplast membrane","termid":"GO:0031969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast inner membrane","synonyms":[{"name":"chloroplast inner envelope","type":"exact"}],"termid":"GO:0009706"}


id: PBO:0082929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial alanyl-tRNA synthetase; required for protein synthesis; point mutation (cdc64-1 allele) causes cell cycle arrest at G1; lethality of null mutation is functionally complemented by human homolog AARS; mutations in human homolog AARS are associated with autoimmune disease polymyositis/dermatomyositis and with hereditary peripheral neuropathy, Charcot-Marie-Tooth (CMT) disease","termid":"PBO:0082929"}


id: PBO:0071236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 77","termid":"PBO:0071236"}


id: GO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.","definition_xrefs":["EC:2.7.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ribulokinase activity","secondary_identifiers":["MetaCyc:RIBULOKIN-RXN","RHEA:22072"],"synonyms":[{"name":"ATP:L(or D)-ribulose 5-phosphotransferase activity","type":"related"},{"name":"L-ribulokinase activity","type":"exact"},{"name":"ribulokinase (phosphorylating)","type":"related"}],"termid":"GO:0008741"}


id: PBO:0070064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 21, pseudogene","termid":"PBO:0070064"}


id: GO:0003887
data:
  {"annotated_genes":["SJAG_05197","SJAG_16460","SJAG_02658","SJAG_02818","SJAG_00153","SJAG_00611","SJAG_04791","SJAG_03906","SJAG_04089","SJAG_02908","SJAG_00814","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58218,70785,73622,74534,75209,75356,75380,77248,78061,78330,103146,103197],"is_not":false,"summary":null,"term":"GO:0003887"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time.","definition_xrefs":["EC:2.7.7.7","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"DNA-directed DNA polymerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003888","Reactome:R-HSA-5693593","Reactome:R-HSA-5649723","Reactome:R-HSA-69116","Reactome:R-HSA-5656148","GO:0016450","Reactome:R-HSA-164505","GO:0019984","MetaCyc:DNA-DIRECTED-DNA-POLYMERASE-RXN","Reactome:R-HSA-5653840","GO:0008723","Reactome:R-HSA-5655965","Reactome:R-HSA-5687640","GO:0015999","GO:0016000","Reactome:R-HSA-5358579","Reactome:R-HSA-73932","Reactome:R-HSA-5655892","Reactome:R-HSA-110317","Reactome:R-HSA-6782208","GO:0003891","GO:0016452","Reactome:R-HSA-5687360","Reactome:R-HSA-5649883","Reactome:R-HSA-6786166","Reactome:R-HSA-68950","GO:0016451","Reactome:R-HSA-174444","Reactome:R-HSA-164513","Reactome:R-HSA-174427","GO:0003889","Reactome:R-HSA-111253","GO:0003894","Reactome:R-HSA-5691001","GO:0003890","GO:0003893","GO:0016449","GO:0016448","Reactome:R-HSA-110311","Reactome:R-HSA-110368","Reactome:R-HSA-5656158","GO:0003895","Reactome:R-HSA-110319","Reactome:R-HSA-9710480"],"synonyms":[{"name":"DNA duplicase activity","type":"related"},{"name":"DNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"DNA polymerase I","type":"narrow"},{"name":"DNA polymerase II","type":"narrow"},{"name":"DNA polymerase III","type":"narrow"},{"name":"DNA polymerase V activity","type":"narrow"},{"name":"DNA polymerase alpha","type":"narrow"},{"name":"DNA polymerase beta","type":"narrow"},{"name":"DNA polymerase gamma","type":"narrow"},{"name":"DNA replicase activity","type":"related"},{"name":"DNA-dependent DNA polymerase activity","type":"related"},{"name":"Klenow fragment","type":"narrow"},{"name":"Taq DNA polymerase","type":"narrow"},{"name":"Taq Pol I","type":"narrow"},{"name":"Tca DNA polymerase","type":"narrow"},{"name":"alpha DNA polymerase activity","type":"narrow"},{"name":"beta DNA polymerase activity","type":"narrow"},{"name":"delta DNA polymerase activity","type":"narrow"},{"name":"deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"deoxyribonucleic acid duplicase activity","type":"related"},{"name":"deoxyribonucleic duplicase activity","type":"related"},{"name":"deoxyribonucleic polymerase I","type":"narrow"},{"name":"duplicase","type":"broad"},{"name":"epsilon DNA polymerase activity","type":"narrow"},{"name":"eta DNA polymerase activity","type":"narrow"},{"name":"gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"iota DNA polymerase activity","type":"narrow"},{"name":"kappa DNA polymerase activity","type":"narrow"},{"name":"lambda DNA polymerase activity","type":"narrow"},{"name":"mu DNA polymerase activity","type":"narrow"},{"name":"nu DNA polymerase activity","type":"narrow"},{"name":"sequenase","type":"related"},{"name":"sigma DNA polymerase activity","type":"narrow"},{"name":"theta DNA polymerase activity","type":"narrow"},{"name":"zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:0003887","terms_by_termid":{"GO:0003887":null}}


id: MONDO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculosis that involves the intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal tuberculosis","secondary_identifiers":["SCTID:60136008","DOID:13282","ICD9:014.8","ICD9:014.80","MEDGEN:546943","UMLS:C0275911"],"synonyms":[{"name":"intestine tuberculosis","type":"exact"},{"name":"tuberculosis of intestine","type":"exact"}],"termid":"MONDO:0001678","xrefs":{"Monarch":{"xref_id":"0001678"}}}


id: MONDO:1011591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, domestic cat","secondary_identifiers":["OMIA:000817-9685"],"termid":"MONDO:1011591","xrefs":{"Monarch":{"xref_id":"1011591"}}}


id: GO:1905280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde transport, endosome to Golgi.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of retrograde transport, endosome to Golgi","termid":"GO:1905279"},{"relation_name":"negatively_regulates","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of retrograde transport, endosome to Golgi","synonyms":[{"name":"down regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"down regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"down-regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"down-regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"downregulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"downregulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"inhibition of retrograde (endosome to Golgi) transport","type":"narrow"},{"name":"inhibition of retrograde transport, endosome to Golgi","type":"narrow"},{"name":"negative regulation of retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:1905280"}


id: PBO:0060018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 6","termid":"PBO:0060018"}


id: GO:0007435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"salivary gland development","termid":"GO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland morphogenesis","termid":"GO:0007435"}


id: PBO:0088615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn11","termid":"PBO:0088615"}


id: PBO:0053126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCORL pseudogene 1","termid":"PBO:0053126"}


id: GO:1902854
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94750],"is_not":false,"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear migration during mitotic telophase.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear migration along microtubule","termid":"GO:1902840"},{"relation_name":"is_a","term_name":"regulation of nuclear migration during mitotic telophase","termid":"GO:1902852"},{"relation_name":"positively_regulates","term_name":"nuclear migration during mitotic telophase","termid":"GO:0090561"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear migration during mitotic telophase","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nuclear migration during mitotic telophase","type":"narrow"},{"name":"up regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"up-regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"upregulation of nuclear migration during mitotic telophase","type":"exact"}],"termid":"GO:1902854","terms_by_termid":{"GO:1902854":null}}


id: PBO:0056708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of cell motility 1","termid":"PBO:0056708"}


id: MONDO:0004479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that occurs during childhood.","definition_xrefs":["NCIT:C6541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant childhood germ cell neoplasm","secondary_identifiers":["UMLS:C1334574","DOID:8149","MEDGEN:233150"],"synonyms":[{"name":"malignant childhood germ cell neoplasm","type":"exact"},{"name":"malignant childhood germ cell tumor","type":"related"},{"name":"malignant childhood germ cell tumour","type":"related"},{"name":"malignant paediatric germ cell neoplasm","type":"related"},{"name":"malignant paediatric germ cell tumour","type":"exact"},{"name":"malignant pediatric germ cell neoplasm","type":"related"},{"name":"malignant pediatric germ cell tumor","type":"exact"}],"termid":"MONDO:0004479","xrefs":{"Monarch":{"xref_id":"0004479"}}}


id: MONDO:0007330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudoarthrosis of the clavicle is a rare benign condition, characterized by a painless mass or swelling over the clavicle.","definition_xrefs":["Orphanet:66630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of clavicle","secondary_identifiers":["GARD:16673","OMIM:118980","UMLS:C0265565","SCTID:70794004","icd11.foundation:1844778103","MEDGEN:75577","MESH:C562548"],"synonyms":[{"name":"clavicle, pseudarthrosis of, congenital","type":"related"},{"name":"congenital pseudarthrosis of the clavicle","type":"exact"},{"name":"congenital pseudoarthrosis of the clavicle","type":"related"}],"termid":"MONDO:0007330","xrefs":{"Monarch":{"xref_id":"0007330"}}}


id: MONDO:0009047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The failure of one or both testes of a male fetus to descend from the abdomen into the scrotum during the late part of pregnancy. If not surgically corrected in early childhood, males may be at increased risk for testicular cancer later in life.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism","secondary_identifiers":["ICD9:752.51","DOID:11383","MEDGEN:8192","OMIM:219050","HP:0000028","icd11.foundation:1134950387","ICD9:752.5","SCTID:204878001","NCIT:C12326","EFO:0004562","UMLS:C0010417","MESH:D003456"],"synonyms":[{"name":"cryptorchidism","type":"exact"},{"name":"cryptorchidism (disease)","type":"exact"},{"name":"cryptorchidism, unilateral or bilateral","type":"related"},{"name":"cryptorchism","type":"exact"},{"name":"undescended testes","type":"exact"},{"name":"undescended testicle","type":"exact"},{"name":"undescended testicles","type":"exact"},{"name":"undescended testis","type":"exact"}],"termid":"MONDO:0009047","xrefs":{"Monarch":{"xref_id":"0009047"}}}


id: GO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"apocarotenoid catabolic process","termid":"GO:0043290"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"abscisic acid catabolic process","synonyms":[{"name":"abscisic acid breakdown","type":"exact"},{"name":"abscisic acid catabolism","type":"exact"},{"name":"abscisic acid degradation","type":"exact"}],"termid":"GO:0046345"}


id: MOD:00310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N5-methyl-L-arginine.","definition_xrefs":["PubMed:11875433","PubMed:9792625","PubMed:9873020","RESID:AA0305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N5-methyl-L-arginine","synonyms":[{"name":"N5-carbamimidoyl-N5-methyl-L-ornithine","type":"exact"},{"name":"N5-methyl-L-arginine","type":"exact"},{"name":"N5-methylated L-arginine","type":"exact"},{"name":"N5Me1Arg","type":"exact"},{"name":"delta-N-methylarginine","type":"exact"},{"name":"(2S)-2-amino-5-(N-methylcarbamimidamido)pentanoic acid","type":"exact"},{"name":"MOD_RES N5-methylarginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"}],"termid":"MOD:00310"}


id: MONDO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that involves sudden and rapidly developing attacks of arthritis with a remission period that results in no joint damage or symptoms.","definition_xrefs":["DOID:1166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hydrarthrosis","termid":"MONDO:0003366"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palindromic rheumatism","secondary_identifiers":["ICD9:719.36","ICD9:719.30","ICD9:719.31","ICD9:719.33","ICD9:719.3","ICD10CM:M12.3","ICD9:719.38","MEDGEN:39080","MESH:C538103","icd11.foundation:494875651","ICD9:719.32","SCTID:50442003","UMLS:C0085574"],"synonyms":[{"name":"Hench's syndrome","type":"exact"},{"name":"Hench-Rosenberg syndrome","type":"exact"}],"termid":"MONDO:0001332","xrefs":{"Monarch":{"xref_id":"0001332"}}}


id: GO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"activation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"stimulation of amino acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"up-regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"upregulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051943"}


id: PBO:0086337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YHR212W-A has a paralog, YAR061W, that arose from a segmental duplication","termid":"PBO:0086337"}


id: FYPO:0002207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore with abnormal morphology","termid":"FYPO:0000309"},{"relation_name":"is_a","term_name":"swollen spore","termid":"FYPO:0000347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen spore","secondary_identifiers":["FYPO:0000308"],"synonyms":[{"name":"inviable enlarged spore","type":"related"},{"name":"inviable large spore","type":"related"},{"name":"inviable spore with increased spore size","type":"related"},{"name":"inviable spore with increased spore volume","type":"exact"},{"name":"lethal; swollen spore","type":"exact"},{"name":"spore germination abolished, enlarged spore","type":"related"},{"name":"spore germination abolished, increased spore size","type":"related"},{"name":"spore germination abolished, increased spore volume","type":"related"},{"name":"spore germination abolished, large spore","type":"related"},{"name":"spore germination abolished, swollen spore","type":"related"}],"termid":"FYPO:0002207"}


id: PBO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated PX/BAR domain sorting nexin Atg20","termid":"PBO:0090577"}


id: GO:0036395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of amylase from a cell of the pancreas.","definition_xrefs":["GOC:jc","PMID:19028687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylase secretion","termid":"GO:0036394"},{"relation_name":"part_of","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"pancreatic amylase secretion","termid":"GO:0036395"}


id: GO:0033892
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106269],"is_not":false,"summary":null,"term":"GO:0033892"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage near pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["EC:3.1.25.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific endodeoxyribonuclease activity, specific for altered base","termid":"GO:0016890"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"deoxyribonuclease (pyrimidine dimer) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.25.1-RXN"],"synonyms":[{"name":"T4 endonuclease V activity","type":"related"},{"name":"bacteriophage T4 endodeoxyribonuclease V activity","type":"related"},{"name":"endodeoxyribonuclease (pyrimidine dimer) activity","type":"related"}],"termid":"GO:0033892","terms_by_termid":{"GO:0033892":null}}


id: PBO:0062197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily T member 1 pseudogene","termid":"PBO:0062197"}


id: GO:0032416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transporter activity","termid":"GO:2000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium:proton antiporter activity","synonyms":[{"name":"down regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"down-regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"downregulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"inhibition of sodium:hydrogen antiporter activity","type":"narrow"},{"name":"negative regulation of sodium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0032416"}


id: PBO:0113308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in magnesium homeostasis; required for Mg2+ sequestration in vacuole; required for normal mitochondrial morphology; has similarity to hemolysins","termid":"PBO:0113308"}


id: PBO:0015243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Bcp1","termid":"PBO:0015243"}


id: MONDO:0010664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Snyder-Robinson syndrome (SRS) is an X-linked intellectual disability syndrome, including also hypotonia, an unsteady gait, osteoporosis, kyphoscoliosis and facial asymmetry. Severe generalized psychomotor evolving to moderate to profound global intellectual disability is also observed.","definition_xrefs":["Orphanet:3063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Snyder type","secondary_identifiers":["ICD9:758.89","NORD:1890","MEDGEN:162918","GARD:5615","SCTID:702416008","UMLS:C0796160","OMIM:309583","DOID:0060802","MESH:C536678"],"synonyms":[{"name":"MRXSSR","type":"related"},{"name":"SRS","type":"exact"},{"name":"Snyder-Robinson Syndrome","type":"exact"},{"name":"Snyder-Robinson intellectual disability syndrome","type":"exact"},{"name":"Snyder-Robinson mental retardation syndrome","type":"exact"},{"name":"Snyder-Robinson syndrome","type":"exact"},{"name":"X-linked intellectual disability Snyder-Robinson type","type":"related"},{"name":"X-linked intellectual disability, Snyder type","type":"related"},{"name":"X-linked mental retardation Snyder-Robinson type","type":"related"},{"name":"intellectual developmental disorder, X-linked syndromic, Snyder-Robinson type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, Snyder-Robinson type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Snyder-Robinson type","type":"related"},{"name":"mental retardation, X-linked, Snyder-Robinson type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Snyder-Robinson type","type":"related"},{"name":"spermine synthase deficiency","type":"exact"},{"name":"syndromic X-linked intellectual disability Snyder type","type":"exact"}],"termid":"MONDO:0010664","xrefs":{"Monarch":{"xref_id":"0010664"}}}


id: PBO:0067873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 175","termid":"PBO:0067873"}


id: PBO:0068297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 4","termid":"PBO:0068297"}


id: FYPO:0001469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases to a greater extent than normal following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal steady-state intracellular calcium level following extracellular calcium stimulus","termid":"FYPO:0001468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased steady-state intracellular calcium level following extracellular calcium stimulus","synonyms":[{"name":"greater increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"increased steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001469"}


id: GO:0019764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete high affinity Fc receptor activity (obsolete GO:0019764)","synonyms":[{"name":"high affinity Fc receptor activity","type":"exact"}],"termid":"GO:0019764"}


id: PBO:0074255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1C1","termid":"PBO:0074255"}


id: PBO:0056035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene B4 receptor 2","termid":"PBO:0056035"}


id: MONDO:1010261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, non-human animal","secondary_identifiers":["OMIA:000712"],"termid":"MONDO:1010261","xrefs":{"Monarch":{"xref_id":"1010261"}}}


id: PBO:0092030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tyrosine (gua), mitochondrial","termid":"PBO:0092030"}


id: MONDO:0007404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 5p, also known as Cri du chat syndrome, is a rare autosomal deletion syndrome characterized by a mewing cry (cri du chat) in infancy, multiple congenital anomalies, intellectual disability, microcephaly, and facial dysmorphism.","definition_xrefs":["Orphanet:281"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 5","termid":"MONDO:0016887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cri-du-chat syndrome","secondary_identifiers":["DOID:12580","OMIM:123450","NCIT:C34518","NORD:1015","MESH:D003410","UMLS:C0010314","icd11.foundation:620584190","SCTID:70173007","ICD9:758.31","MEDGEN:41345","DECIPHER:2","MedDRA:10011385","NANDO:1200684","GARD:6213","ICD9:758.39","NANDO:2200961"],"synonyms":[{"name":"5p deletion syndrome","type":"exact"},{"name":"5p minus syndrome","type":"related"},{"name":"5p partial monosomy syndrome","type":"exact"},{"name":"5p- syndrome","type":"related"},{"name":"Cat Cry syndrome","type":"related"},{"name":"Cat-Cry syndrome","type":"exact"},{"name":"Cri du Chat Syndrome","type":"exact"},{"name":"Cri du chat syndrome","type":"exact"},{"name":"Cri-du-chat syndrome","type":"exact"},{"name":"chromosome 5 short arm deletion syndrome","type":"exact"},{"name":"chromosome 5P deletion syndrome","type":"related"},{"name":"chromosome 5p deletion syndrome","type":"exact"},{"name":"chromosome 5p- syndrome","type":"related"},{"name":"deletion 5p","type":"exact"},{"name":"monosomy 5p","type":"related"},{"name":"monosomy type 5p","type":"exact"}],"termid":"MONDO:0007404","xrefs":{"Monarch":{"xref_id":"0007404"}}}


id: PBO:0069295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 551, pseudogene","termid":"PBO:0069295"}


id: MONDO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the male or female reproductive system. Representative examples include benign prostate phyllodes tumor, benign Sertoli cell tumor, uterine corpus leiomyoma, and benign ovarian serous tumor.","definition_xrefs":["NCIT:C7617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign reproductive system neoplasm","secondary_identifiers":["DOID:0050622","MEDGEN:234034","UMLS:C1332536"],"synonyms":[{"name":"benign reproductive system neoplasm","type":"exact"},{"name":"reproductive organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000383","xrefs":{"Monarch":{"xref_id":"0000383"}}}


id: MONDO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic renal disease (obsolete MONDO:0020030)","secondary_identifiers":["Orphanet:98056"],"termid":"MONDO:0020030","xrefs":{"Monarch":{"xref_id":"0020030"}}}


id: PBO:0078273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-1","termid":"PBO:0078273"}


id: MONDO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroiditis associated with painless enlargement of the thyroid gland. It occurs more frequently in females and is characterized by alterations between hyperthyroidism and hypothyroidism and the eventual return to normal thyroid gland function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute thyroiditis","termid":"MONDO:0001949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute lymphocytic thyroiditis","secondary_identifiers":["MEDGEN:266299","SCTID:361126006","NCIT:C35829","DOID:7187","UMLS:C1306804"],"synonyms":[{"name":"Subacute lymphocytic thyroiditis","type":"exact"},{"name":"Subacute painless thyroiditis","type":"exact"},{"name":"silent thyroiditis","type":"exact"}],"termid":"MONDO:0004135","xrefs":{"Monarch":{"xref_id":"0004135"}}}


id: PBO:0074422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 21","termid":"PBO:0074422"}


id: GO:0046592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative degradation or interconversion of polyamines.","definition_xrefs":["PMID:1567380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"polyamine oxidase activity","synonyms":[{"name":"1-N-acetylspermidine:oxygen oxidoreductase (deaminating)","type":"narrow"},{"name":"N1-acetylspermidine:oxygen oxidoreductase (deaminating)","type":"narrow"}],"termid":"GO:0046592"}


id: PBO:0044157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase 2","termid":"PBO:0044157"}


id: MONDO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder carcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a tubulo-cystic pattern.","definition_xrefs":["NCIT:C39847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder tubulo-cystic clear cell adenocarcinoma","secondary_identifiers":["DOID:8050","MEDGEN:267060","UMLS:C1511203"],"synonyms":[{"name":"bladder tubulo-cystic clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0004444","xrefs":{"Monarch":{"xref_id":"0004444"}}}


id: GO:1900669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of endocrocin biosynthetic process","termid":"GO:1900667"},{"relation_name":"positively_regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of endocrocin biosynthetic process","synonyms":[{"name":"activation of endocrocin anabolism","type":"exact"},{"name":"activation of endocrocin biosynthesis","type":"exact"},{"name":"activation of endocrocin biosynthetic process","type":"narrow"},{"name":"activation of endocrocin formation","type":"exact"},{"name":"activation of endocrocin synthesis","type":"exact"},{"name":"positive regulation of endocrocin anabolism","type":"exact"},{"name":"positive regulation of endocrocin biosynthesis","type":"exact"},{"name":"positive regulation of endocrocin formation","type":"exact"},{"name":"positive regulation of endocrocin synthesis","type":"exact"},{"name":"up regulation of endocrocin anabolism","type":"exact"},{"name":"up regulation of endocrocin biosynthesis","type":"exact"},{"name":"up regulation of endocrocin biosynthetic process","type":"exact"},{"name":"up regulation of endocrocin formation","type":"exact"},{"name":"up regulation of endocrocin synthesis","type":"exact"},{"name":"up-regulation of endocrocin anabolism","type":"exact"},{"name":"up-regulation of endocrocin biosynthesis","type":"exact"},{"name":"up-regulation of endocrocin biosynthetic process","type":"exact"},{"name":"up-regulation of endocrocin formation","type":"exact"},{"name":"up-regulation of endocrocin synthesis","type":"exact"},{"name":"upregulation of endocrocin anabolism","type":"exact"},{"name":"upregulation of endocrocin biosynthesis","type":"exact"},{"name":"upregulation of endocrocin biosynthetic process","type":"exact"},{"name":"upregulation of endocrocin formation","type":"exact"},{"name":"upregulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900669"}


id: PBO:0056478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 1","termid":"PBO:0056478"}


id: GO:0046383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-rhamnose, a substance composed of rhamnose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dTDP-rhamnose metabolic process","synonyms":[{"name":"dTDP-rhamnose metabolism","type":"exact"}],"termid":"GO:0046383"}


id: PATO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conspicuous","synonyms":[{"name":"distinct","type":"related"}],"termid":"PATO:0000463"}


id: PBO:0045522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTNB antisense RNA 1","termid":"PBO:0045522"}


id: MONDO:0015877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformative syndrome with dentinogenesis imperfecta (obsolete MONDO:0015877)","secondary_identifiers":["Orphanet:180766"],"termid":"MONDO:0015877","xrefs":{"Monarch":{"xref_id":"0015877"}}}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: GO:0046687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chromate","synonyms":[{"name":"chromate sensitivity/resistance","type":"related"}],"termid":"GO:0046687"}


id: GO:0070301
data:
  {"annotated_genes":["SJAG_01199","SJAG_02515","SJAG_01216","SJAG_04823","SJAG_00141","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117668,100324,105368,109148,118591,95529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:mah","CHEBI:16240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"},{"relation_name":"is_a","term_name":"response to hydrogen peroxide","termid":"GO:0042542"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070301","terms_by_termid":{"GO:0061692":null}}


id: GO:1903950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AV node cell action potential.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","PMID:25281747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of AV node cell action potential","termid":"GO:0098904"},{"relation_name":"negatively_regulates","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of AV node cell action potential","synonyms":[{"name":"down regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of AV node cell action potential","type":"exact"},{"name":"down regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of AV node cell action potential","type":"exact"},{"name":"down-regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of AV node cell action potential","type":"exact"},{"name":"downregulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of AV node cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of AV node cell action potential","type":"narrow"},{"name":"inhibition of atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903950"}


id: GO:0072484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about spindle assembly is received and converted into a molecular signal, contributing to a spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in spindle assembly checkpoint (obsolete GO:0072484)","synonyms":[{"name":"sensing involved in spindle assembly checkpoint","type":"related"},{"name":"spindle assembly checkpoint sensor mechanism","type":"related"},{"name":"spindle assembly checkpoint sensor process","type":"related"}],"termid":"GO:0072484"}


id: PBO:0065273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR34 antisense RNA 1","termid":"PBO:0065273"}


id: GO:1903900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral life cycle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18005716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral life cycle","synonyms":[{"name":"regulation of lytic viral life cycle","type":"related"},{"name":"regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"regulation of viral infectious cycle","type":"related"},{"name":"regulation of viral replication","type":"related"}],"termid":"GO:1903900"}


id: PBO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC27 antisense RNA 1","termid":"PBO:0045248"}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: FYPO:0005841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cortex of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005828"},{"relation_name":"is_a","term_name":"normal protein localization to cell cortex of cell tip","termid":"FYPO:0006876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein transport along microtubule to cell tip cortex during vegetative growth","secondary_identifiers":["FYPO:0005829"],"synonyms":[{"name":"normal protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005841"}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: GO:0141197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H+ + H2O + oxidized [flavodoxin] = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + reduced [flavodoxin].","definition_xrefs":["RHEA:43604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-enyl-diphosphate synthase activity (flavodoxin)","secondary_identifiers":["KEGG_REACTION:R10859","EC:1.17.7.3","MetaCyc:RXN-15878"],"synonyms":[{"name":"(E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase activity","type":"broad"},{"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity","type":"broad"}],"termid":"GO:0141197"}


id: PBO:0084358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-zipper transcriptional activator; responsible for regulation of sulfur amino acid pathway; requires different combinations of auxiliary factors Cbf1p, Met28p, Met31p and Met32p; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; can be ubiquitinated by ubiquitin ligase SCF-Met30p, is either degraded or maintained in an inactive state; regulates degradation of its own DNA-binding cofactors by targeting them to SCF-Met30p","termid":"PBO:0084358"}


id: PBO:0042516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase","termid":"PBO:0042516"}


id: FYECO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells or samples were exposed to X-rays.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionizing radiation","termid":"FYECO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-rays","synonyms":[{"name":"X rays","type":"exact"}],"termid":"FYECO:0000425"}


id: PBO:0067744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 43","termid":"PBO:0067744"}


id: PR:Q9UTR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.04c","synonyms":[{"name":"Spom972h-mcp3","type":"exact"},{"name":"meiotically up-regulated gene 7 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTR7"}


id: PBO:0083611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious ORF that overlaps YDR520C; mutant increases expression of PIS1 and RPL3 in glycerol","termid":"PBO:0083611"}


id: PBO:0086300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in translation; forms a complex with Gir2p; has similarity to mammalian developmentally regulated GTP-binding protein","termid":"PBO:0086300"}


id: MONDO:0006432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney characterized by the predominance of the mesenchymal component.","definition_xrefs":["NCIT:C9148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"stromal predominant kidney Wilms tumor","secondary_identifiers":["UMLS:C0279610","MEDGEN:83529","DOID:5191"],"synonyms":[{"name":"stromal predominant Wilms tumor","type":"exact"},{"name":"stromal predominant Wilms tumour","type":"exact"},{"name":"stromal predominant kidney Wilms tumor","type":"exact"},{"name":"stromal predominant kidney Wilms' tumor","type":"exact"},{"name":"stromal predominant kidney Wilms' tumour","type":"exact"},{"name":"stromal predominant kidney adenosarcoma","type":"exact"},{"name":"stromal predominant nephroblastoma","type":"exact"},{"name":"stromal predominant renal Wilm's tumor","type":"exact"},{"name":"stromal predominant renal Wilm's tumour","type":"exact"},{"name":"stromal predominant renal Wilms tumor","type":"exact"},{"name":"stromal predominant renal Wilms tumour","type":"exact"},{"name":"stromal predominant renal Wilms' tumor","type":"exact"},{"name":"stromal predominant renal Wilms' tumour","type":"exact"},{"name":"stromal predominant renal adenosarcoma","type":"exact"}],"termid":"MONDO:0006432","xrefs":{"Monarch":{"xref_id":"0006432"}}}


id: GO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + oxamate = oxalurate + phosphate.","definition_xrefs":["RHEA:22984","EC:2.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"oxamate carbamoyltransferase activity","secondary_identifiers":["MetaCyc:OXAMATE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R02937"],"synonyms":[{"name":"carbamoyl-phosphate:oxamate carbamoyltransferase activity","type":"related"},{"name":"oxamic transcarbamylase activity","type":"related"}],"termid":"GO:0050205"}


id: GO:1905418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:cilia","GOC:TermGenie","GOC:krc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amoeboid sperm motility","synonyms":[{"name":"activation of ameboid sperm motility","type":"narrow"},{"name":"activation of ameboid sperm movement","type":"narrow"},{"name":"activation of amoeboid sperm motility","type":"narrow"},{"name":"activation of amoeboid sperm movement","type":"narrow"},{"name":"positive regulation of ameboid sperm motility","type":"exact"},{"name":"positive regulation of ameboid sperm movement","type":"exact"},{"name":"positive regulation of amoeboid sperm movement","type":"exact"},{"name":"up regulation of ameboid sperm motility","type":"exact"},{"name":"up regulation of ameboid sperm movement","type":"exact"},{"name":"up regulation of amoeboid sperm motility","type":"exact"},{"name":"up regulation of amoeboid sperm movement","type":"exact"},{"name":"up-regulation of ameboid sperm motility","type":"exact"},{"name":"up-regulation of ameboid sperm movement","type":"exact"},{"name":"up-regulation of amoeboid sperm motility","type":"exact"},{"name":"up-regulation of amoeboid sperm movement","type":"exact"},{"name":"upregulation of ameboid sperm motility","type":"exact"},{"name":"upregulation of ameboid sperm movement","type":"exact"},{"name":"upregulation of amoeboid sperm motility","type":"exact"},{"name":"upregulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905418"}


id: GO:0042838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucarate, the D-enantiomer of glucarate.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"glucarate catabolic process","termid":"GO:0019394"},{"relation_name":"is_a","term_name":"D-glucarate metabolic process","termid":"GO:0042836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0005975"],"is_obsolete":false,"name":"D-glucarate catabolic process","synonyms":[{"name":"D-glucarate breakdown","type":"exact"},{"name":"D-glucarate catabolism","type":"exact"},{"name":"D-glucarate degradation","type":"exact"},{"name":"saccharate catabolic process","type":"exact"},{"name":"saccharate catabolism","type":"exact"}],"termid":"GO:0042838"}


id: GO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of bilateral symmetry","synonyms":[{"name":"determination of bilateral asymmetry","type":"exact"}],"termid":"GO:0009855"}


id: FYPO:0005051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen deprivation","type":"exact"},{"name":"decreased protein localization to chromatin at polymerase II regulated genes during nitrogen starvation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005051"}


id: PBO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 1","termid":"PBO:0052118"}


id: GO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Arg-Xaa bond in Lys-Arg-Xaa and Arg-Arg-Xaa to process Yeast alpha-factor pheromone and killer toxin precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete kexin activity (obsolete GO:0004290)","synonyms":[{"name":"Kex 2p proteinase","type":"narrow"},{"name":"Kex2 endopeptidase","type":"narrow"},{"name":"Kex2 endoprotease","type":"narrow"},{"name":"Kex2 endoproteinase","type":"narrow"},{"name":"Kex2 protease","type":"narrow"},{"name":"Kex2 proteinase","type":"narrow"},{"name":"Kex2-like endoproteinase","type":"narrow"},{"name":"Kex2-like precursor protein processing endoprotease","type":"narrow"},{"name":"andrenorphin-Gly-generating enzyme","type":"related"},{"name":"endoproteinase Kex2p","type":"related"},{"name":"gene KEX2 dibasic proteinase","type":"narrow"},{"name":"kexin activity","type":"exact"},{"name":"paired-basic endopeptidase activity","type":"related"},{"name":"prohormone-processing KEX2 proteinase","type":"narrow"},{"name":"prohormone-processing endoprotease activity","type":"related"},{"name":"prohormone-processing proteinase activity","type":"related"},{"name":"protease KEX2","type":"related"},{"name":"proteinase Kex2p","type":"related"},{"name":"proteinase yscF activity","type":"narrow"},{"name":"yeast KEX2 protease activity","type":"narrow"},{"name":"yeast cysteine proteinase F","type":"related"}],"termid":"GO:0004290"}


id: PBO:0073867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 3","termid":"PBO:0073867"}


id: GO:0090596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["ISBN:978-0199210893","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ morphogenesis","termid":"GO:0090596"}


id: MONDO:1010002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, non-human animal","secondary_identifiers":["OMIA:000689"],"termid":"MONDO:1010002","xrefs":{"Monarch":{"xref_id":"1010002"}}}


id: PBO:0048652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD2 divergent transcript","termid":"PBO:0048652"}


id: GO:0097064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a non-coding RNA transcript (ncRNA) from the nucleus to the cytoplasm.","definition_xrefs":["PMID:11352936","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA export from nucleus (obsolete GO:0097064)","termid":"GO:0097064"}


id: GO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane involved in mitochondrial fission","synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane involved in mitochondrial fission","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090152"}


id: PBO:0004820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C","termid":"PBO:0004820"}


id: PBO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 4","termid":"PBO:0061346"}


id: GO:0070421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III and XRCC1, and is involved in base excision repair.","definition_xrefs":["PMID:15141024","PMID:7760816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DNA ligase III-XRCC1 complex","termid":"GO:0070421"}


id: MONDO:0018696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticobasal syndrome (CBS) is a rare neurodegenerative disease characterized by multifaceted motor system dysfunctions and cognitive defects such as asymmetric rigidity, bradykinesia, limb apraxia, and visuospatial dysfunction.","definition_xrefs":["Orphanet:454887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"corticobasal syndrome","secondary_identifiers":["MEDGEN:1801322","DOID:0081392","UMLS:C5575119","GARD:13168"],"termid":"MONDO:0018696","xrefs":{"Monarch":{"xref_id":"0018696"}}}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: PBO:0043646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 6","termid":"PBO:0043646"}


id: GO:1900728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cardiac neural crest cell delamination that is involved in outflow tract morphogenesis.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:18539270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac neural crest cell delamination","termid":"GO:0036036"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cardiac neural crest cell delamination involved in outflow tract morphogenesis","termid":"GO:1900728"}


id: GO:0006315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral transfer of a group II intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron; group II introns are self-splicing introns with a conserved secondary structure.","definition_xrefs":["GOC:mcc","ISBN:0716743663","PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron homing","termid":"GO:0006314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"homing of group II introns","termid":"GO:0006315"}


id: GO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Large glycoprotein that is a calcium binding component of connective tissue microfibrils containing 34 six-cysteine (EGF-like) repeats and five eight-cysteine (TGFbeta-1 binding protein-like) repeats. Defects associated with Marfan syndrome.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrillin (obsolete GO:0001511)","synonyms":[{"name":"fibrillin","type":"exact"}],"termid":"GO:0001511"}


id: GO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"positive regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of GABA reuptake","type":"exact"},{"name":"positive regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051950"}


id: PATO:0001413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of the bearer's angular movement about an axis; the angle rotated in a given time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"velocity","termid":"PATO:0002242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular velocity","termid":"PATO:0001413"}


id: GO:1901075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GO:kmv","PMID:19402756","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic cell clearance","termid":"GO:2000426"},{"relation_name":"negatively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of engulfment of apoptotic cell","synonyms":[{"name":"down regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down regulation of engulfment of cell corpse","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down-regulation of engulfment of cell corpse","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"downregulation of engulfment of cell corpse","type":"exact"},{"name":"inhibition of engulfment of apoptotic cell","type":"narrow"},{"name":"inhibition of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"inhibition of engulfment of cell corpse","type":"narrow"},{"name":"negative regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"negative regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901075"}


id: PBO:0046498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERH pseudogene 1","termid":"PBO:0046498"}


id: GO:0140502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of host salicylic acid-mediated innate immune signaling.","definition_xrefs":["PMID:30651637","PMID:25438793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of defense-related host salicylic acid-mediated signal transduction pathway","termid":"GO:0052003"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signaling","synonyms":[{"name":"effector-mediated disruption of host salicylic acid-mediated innate immune signalling","type":"exact"},{"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signalling","type":"exact"}],"termid":"GO:0140502"}


id: GO:0038163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by thrombopoietin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling","PMID:19630807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombopoietin-mediated signaling pathway","synonyms":[{"name":"THPO signaling pathway","type":"exact"},{"name":"THPO/MPL signaling pathway","type":"exact"},{"name":"thrombopoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038163"}


id: PBO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 6","termid":"PBO:0071400"}


id: MONDO:0016508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non surgically correctable form of primary aldosteronism (obsolete MONDO:0016508)","secondary_identifiers":["Orphanet:231641"],"termid":"MONDO:0016508","xrefs":{"Monarch":{"xref_id":"0016508"}}}


id: GO:0015106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"bicarbonate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2752067"],"synonyms":[{"name":"hydrogencarbonate transmembrane transporter activity","type":"exact"}],"termid":"GO:0015106"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0140656","PMID:33836577","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: PBO:0064690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 26","termid":"PBO:0064690"}


id: PBO:0042718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle exit and neuronal differentiation 1","termid":"PBO:0042718"}


id: GO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + phthalate = cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD+.","definition_xrefs":["EC:1.14.12.7","RHEA:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"phthalate 4,5-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03630","MetaCyc:PHTHALATE-45-DIOXYGENASE-RXN","UM-BBD_reactionID:r0102"],"synonyms":[{"name":"PDO activity","type":"related"},{"name":"phthalate dioxygenase activity","type":"broad"},{"name":"phthalate,NADH:oxygen oxidoreductase (4,5-hydroxylating)","type":"related"}],"termid":"GO:0018620"}


id: GO:1903418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a plasma membrane of cell tip.","definition_xrefs":["PMID:27852900","GO_REF:0000087","GOC:TermGenie","PMID:25157670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to plasma membrane of cell tip","synonyms":[{"name":"protein localisation in plasma membrane of cell tip","type":"exact"},{"name":"protein localisation to plasma membrane of cell tip","type":"exact"},{"name":"protein localization in plasma membrane of cell tip","type":"exact"}],"termid":"GO:1903418"}


id: FYPO:0008240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of polyphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular polyphosphate level","termid":"FYPO:0008024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased total cellular polyphosphate level","termid":"FYPO:0008240"}


id: MONDO:0008004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of mitral valve prolapse (disease) that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve prolapse","termid":"MONDO:0004910"},{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"},{"relation_name":"is_a","term_name":"inherited mitral valve disease","termid":"MONDO:0042966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial mitral valve prolapse","secondary_identifiers":["OMIMPS:157700","MEDGEN:573696","GARD:3687","SCTID:233858000","Orphanet:741","UMLS:C0340364"],"synonyms":[{"name":"MVP","type":"related"},{"name":"hereditary mitral valve prolapse (disease)","type":"exact"},{"name":"mitral valve prolapse, familial","type":"related"},{"name":"mitral valve prolapse, familial, autosomal dominant","type":"related"}],"termid":"MONDO:0008004","xrefs":{"Monarch":{"xref_id":"0008004"}}}


id: PBO:0075136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A","termid":"PBO:0075136"}


id: GO:0097257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + NADP+ = 12-oxo-leukotriene B4 + NADPH + H+.","definition_xrefs":["PMID:9461497","PMID:8394361","GOC:mw","KEGG_REACTION:R03864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"leukotriene B4 12-hydroxy dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161567","RHEA:50608"],"synonyms":[{"name":"leukotriene B4 12-hydroxydehydrogenase activity","type":"exact"}],"termid":"GO:0097257"}


id: FYPO:0003608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of dehydrodolichyl diphosphate synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal dehydrodolichyl diphosphate synthase activity","termid":"FYPO:0003608"}


id: PBO:0027558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_alpha-glucan_level","termid":"PBO:0027558"}


id: PBO:0069182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 436, pseudogene","termid":"PBO:0069182"}


id: GO:2000296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide catabolic process","termid":"GO:2000295"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide catabolic process","synonyms":[{"name":"negative regulation of H2O2 catabolic process","type":"exact"},{"name":"negative regulation of H2O2 scavenging","type":"related"},{"name":"negative regulation of detoxification of H2O2","type":"related"},{"name":"negative regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"negative regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"negative regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"negative regulation of hydrogen peroxide degradation","type":"exact"},{"name":"negative regulation of hydrogen peroxide removal","type":"related"},{"name":"negative regulation of hydrogen peroxide scavenging","type":"related"}],"termid":"GO:2000296"}


id: GO:0004058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-amino acid + H+ = R-H + CO2.","definition_xrefs":["EC:4.1.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aromatic-L-amino-acid decarboxylase activity","secondary_identifiers":["Reactome:R-HSA-209924","GO:0016400","MetaCyc:AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN","Reactome:R-HSA-209859"],"synonyms":[{"name":"5-hydroxytryptophan decarboxylase activity","type":"narrow"},{"name":"DOPA decarboxylase activity","type":"narrow"},{"name":"L-DOPA decarboxylase activity","type":"narrow"},{"name":"aromatic amino acid decarboxylase activity","type":"related"},{"name":"aromatic-L-amino-acid carboxy-lyase (tryptamine-forming)","type":"narrow"},{"name":"aromatic-L-amino-acid carboxy-lyase activity","type":"related"},{"name":"hydroxytryptophan decarboxylase activity","type":"narrow"},{"name":"tryptophan decarboxylase activity","type":"narrow"}],"termid":"GO:0004058"}


id: GO:0050101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-mimosine + H2O = 3-hydroxy-4H-pyrid-4-one + L-serine.","definition_xrefs":["RHEA:75355","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"mimosinase activity","secondary_identifiers":["MetaCyc:MIMOSINASE-RXN","EC:4.3.3.8","KEGG_REACTION:R04350"],"synonyms":[{"name":"mimosine amidohydrolase activity","type":"related"}],"termid":"GO:0050101"}


id: PBO:0038581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 1","termid":"PBO:0038581"}


id: GO:0047441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-5-dehydro-2-deoxy-D-gluconate = 3-oxopropanoate + glycerone phosphate.","definition_xrefs":["RHEA:13177","EC:4.1.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"5-dehydro-2-deoxyphosphogluconate aldolase activity","secondary_identifiers":["MetaCyc:4.1.2.29-RXN","KEGG_REACTION:R05378"],"synonyms":[{"name":"5-dehydro-2-deoxy-D-gluconate-6-phosphate malonate-semialdehyde-lyase (pyruvate-forming)","type":"related"},{"name":"5-dehydro-2-deoxy-D-gluconate-6-phosphate malonate-semialdehyde-lyase activity","type":"related"},{"name":"phospho-5-dehydro-2-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-5-keto-2-deoxygluconate aldolase activity","type":"related"}],"termid":"GO:0047441"}


id: GO:0003857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+.","definition_xrefs":["EC:1.1.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-77331","Reactome:R-HSA-390251","Reactome:R-HSA-77254","Reactome:R-HSA-77342","Reactome:R-HSA-77323","Reactome:R-HSA-389995","Reactome:R-HSA-193508","Reactome:R-HSA-6809264","Reactome:R-HSA-508369","RHEA:22432","UM-BBD_reactionID:r1063","MetaCyc:OHACYL-COA-DEHYDROG-RXN","Reactome:R-HSA-77303","Reactome:R-HSA-193455","Reactome:R-HSA-70837","Reactome:R-HSA-77283","Reactome:R-HSA-77312"],"synonyms":[{"name":"3-oxoacyl-thioester reductase activity","type":"related"},{"name":"L-3-hydroxyacyl CoA dehydrogenase activity","type":"related"},{"name":"L-3-hydroxyacyl coenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxyacyl dehydrogenase activity","type":"related"},{"name":"beta-hydroxyacyl-coenzyme A synthetase activity","type":"related"},{"name":"beta-hydroxyacylcoenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyrylcoenzyme A dehydrogenase activity","type":"narrow"},{"name":"beta-keto-reductase activity","type":"related"},{"name":"beta-ketoacyl-CoA reductase","type":"broad"}],"termid":"GO:0003857"}


id: GO:0018822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amide = a nitrile + H2O.","definition_xrefs":["RHEA:12673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"nitrile hydratase activity","secondary_identifiers":["EC:4.2.1.84","MetaCyc:NITRILE-HYDRATASE-RXN"],"synonyms":[{"name":"3-cyanopyridine hydratase activity","type":"narrow"},{"name":"H-NHase activity","type":"related"},{"name":"L-NHase activity","type":"related"},{"name":"NHase activity","type":"related"},{"name":"acrylonitrile hydratase activity","type":"related"},{"name":"aliphatic nitrile hydratase activity","type":"related"},{"name":"aliphatic-amide hydro-lyase (nitrile-forming)","type":"related"},{"name":"nitrile hydro-lyase activity","type":"related"}],"termid":"GO:0018822"}


id: GO:0036099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of female germ-line stem cells.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell population maintenance","termid":"GO:0030718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line stem cell population maintenance","termid":"GO:0036099"}


id: PBO:0050265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 43","termid":"PBO:0050265"}


id: MONDO:0024239
data:
  {"annotated_genes":["SJAG_03703","SJAG_03145","SJAG_02431","SJAG_04781","SJAG_04901","SJAG_03764","SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86321,86320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[85693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[87009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[87008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"},{"annotations":[85698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016581"},{"annotations":[86525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[86527,86526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[85776,85775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014548"},{"annotations":[85774,85773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014550"},{"annotations":[87059,87060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[87710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013367"},{"annotations":[86956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of cardiovascular system development.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null,"SJAG_03764":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of cardiovascular system","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:777113","SCTID:9904008","ICD9:747.9","NCIT:C35729","ICD9:747.89","UMLS:C3665496"],"synonyms":[{"name":"cardiovascular system development disease","type":"exact"},{"name":"congenital Abnormality of the circulatory system","type":"exact"},{"name":"congenital anomaly of cardiovascular system","type":"exact"},{"name":"congenital cardiovascular Abnormality","type":"exact"},{"name":"congenital cardiovascular anomaly","type":"exact"},{"name":"congenital cardiovascular disorder","type":"related"},{"name":"disorder of cardiovascular system development","type":"exact"}],"termid":"MONDO:0024239","terms_by_termid":{"MONDO:0008542":null,"MONDO:0013011":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013367":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0016581":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0024239"}}}


id: PBO:0027698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mRNA_absent_from_cell","termid":"PBO:0027698"}


id: PBO:0116694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 19, oligomeric (gene/pseudogene)","termid":"PBO:0116694"}


id: PATO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly by having or as if having an end or point cut off.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated","synonyms":[{"name":"truncate","type":"exact"}],"termid":"PATO:0000936"}


id: PBO:0068647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 28, pseudogene","termid":"PBO:0068647"}


id: GO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 = NAD+ + OH- + 4-sulfobenzyl alcohol.","definition_xrefs":["RHEA:51024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"toluene-sulfonate methyl-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0290","MetaCyc:TSMOS-RXN"],"synonyms":[{"name":"toluene-sulphonate methyl-monooxygenase activity","type":"exact"}],"termid":"GO:0018652"}


id: PBO:0047643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1B pseudogene 1","termid":"PBO:0047643"}


id: PBO:0061550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IIIA","termid":"PBO:0061550"}


id: PBO:0003157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1776 family protein","termid":"PBO:0003157"}


id: PBO:0062631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 12","termid":"PBO:0062631"}


id: GO:0018313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, an alanine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.","definition_xrefs":["RESID:AA0187"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-alanyl-5-imidazolinone glycine (obsolete GO:0018313)","termid":"GO:0018313"}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: PBO:0048089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 10","termid":"PBO:0048089"}


id: PBO:0043145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 13","termid":"PBO:0043145"}


id: PR:Q09844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.03c gene.","definition_xrefs":["UniProtKB:Q09844","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C23D3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.03c","synonyms":[{"name":"Spom972h-SPAC23D3.03c","type":"exact"}],"termid":"PR:Q09844"}


id: GO:0099401
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a caveola that extends into the cytoplasm, excluding the neck (rim). This region is associated with intracellular caveola proteins.","definition_xrefs":["PMID:17227843","GOC:POD","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"caveola bulb","synonyms":[{"name":"caveola crater","type":"exact"}],"termid":"GO:0099401"}


id: SO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of an operon, which is a set of genes transcribed together as a unit.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"operon_member","synonyms":[{"name":"operon member","type":"exact"}],"termid":"SO:0000080"}


id: GO:0032684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"negatively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of fractalkine production","secondary_identifiers":["GO:0050753"],"synonyms":[{"name":"down regulation of fractalkine production","type":"exact"},{"name":"down-regulation of fractalkine production","type":"exact"},{"name":"downregulation of fractalkine production","type":"exact"},{"name":"inhibition of fractalkine production","type":"narrow"},{"name":"negative regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"negative regulation of CX3CL1 production","type":"exact"},{"name":"negative regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032684"}


id: PBO:0017997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transmembrane transporter Str1","termid":"PBO:0017997"}


id: GO:2000396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin-dependent endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent endocytosis","termid":"GO:2000395"},{"relation_name":"negatively_regulates","term_name":"ubiquitin-dependent endocytosis","termid":"GO:0070086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ubiquitin-dependent endocytosis","synonyms":[{"name":"negative regulation of ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:2000396"}


id: PBO:0087659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS endocytic tethering complex; vacuole membrane protein that functions as a Rab GTPase effector, interacting specifically with the GTP-bound conformation of Ypt7p, facilitating tethering, docking and promoting membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; Yck3p-mediated phosphorylation regulates the organization of vacuolar fusion sites","termid":"PBO:0087659"}


id: PBO:0011518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011518"}


id: PBO:0073267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 11","termid":"PBO:0073267"}


id: PBO:0029921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_squalene_level","termid":"PBO:0029921"}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:20118212","SO:ke","PMID:1489142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: GO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine37 in tRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine37 in tRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43332","PMID:22891362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140098","GO:0140101","GO:0016741"],"is_obsolete":false,"name":"tRNA (adenine(37)-C2)-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-7007"],"synonyms":[{"name":"tRNA (adenine(37)-C(2))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(37)-C2-)-methyltransferase activity","type":"exact"}],"termid":"GO:0002935"}


id: FYPO:0007901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal.","definition_xrefs":["PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of R-loops","synonyms":[{"name":"increased level of R-loops","type":"exact"},{"name":"increased level of RNA-DNA hybrids","type":"exact"}],"termid":"FYPO:0007901"}


id: FYPO:0006922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the removal of a sliding clamp such as PCNA from DNA during replication is abnormal.","definition_xrefs":["GO:0090618","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal DNA clamp unloading","synonyms":[{"name":"abnormal DNA clamp unloading during mitotic cell cycle","type":"related"},{"name":"abnormal DNA clamp unloading during vegetative growth","type":"exact"},{"name":"abnormal PCNA unloading","type":"related"}],"termid":"FYPO:0006922"}


id: GO:0048766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protrusion or bulge is formed at the site of plant root hair outgrowth.","definition_xrefs":["PMID:12468740","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"root hair cell differentiation","termid":"GO:0048765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair initiation","termid":"GO:0048766"}


id: PBO:0085419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; exports copper; has broad substrate specificity and can transport many mono- and divalent cations; transports a variety of drugs and is required for resistance to quinidine, barban, cisplatin, and bleomycin; contributes to potassium homeostasis; expression is regulated by copper","termid":"PBO:0085419"}


id: PBO:0032730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Smp3 (predicted)","termid":"PBO:0032730"}


id: PBO:0050762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 24","termid":"PBO:0050762"}


id: PBO:0017560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase Tcd1 (predicted)","termid":"PBO:0017560"}


id: PBO:0064242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D1","termid":"PBO:0064242"}


id: PBO:0070259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 4, pseudogene","termid":"PBO:0070259"}


id: MONDO:0012368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aminoacylase 1 deficiency (ACY1D) is an inborn error of metabolism marked by a characteristic pattern of urinary N-acetyl amino acid excretion and neurologic symptoms.","definition_xrefs":["Orphanet:137754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn aminoacylase deficiency","termid":"MONDO:0017686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"aminoacylase 1 deficiency","secondary_identifiers":["MEDGEN:324393","GARD:9741","ICD9:270.8","OMIM:609924","SCTID:709282004","EFO:1001981","MESH:C538246","UMLS:C1835922"],"synonyms":[{"name":"ACY1 deficiency","type":"related"},{"name":"ACY1D","type":"exact"},{"name":"N-acyl-L-amino acid amidohydrolase deficiency","type":"exact"},{"name":"aminoacylase 1 deficiency","type":"exact"},{"name":"deficiency of the aminoacylase-1 enzyme","type":"related"},{"name":"neurological conditions associated with aminoacylase 1 deficiency","type":"exact"}],"termid":"MONDO:0012368","xrefs":{"Monarch":{"xref_id":"0012368"}}}


id: GO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1-alpha-D-galactosyl-myo-inositol = raffinose + myo-inositol.","definition_xrefs":["MetaCyc:2.4.1.82-RXN","EC:2.4.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactinol-sucrose galactosyltransferase activity","secondary_identifiers":["RHEA:20161"],"synonyms":[{"name":"1-alpha-D-galactosyl-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"alpha-D-galactosyl-(1->3)-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"galactinol:sucrose 6-galactosyl transferase activity","type":"exact"},{"name":"galactosyltransferase, galactinol-sucrose","type":"exact"},{"name":"raffinose synthase activity","type":"exact"}],"termid":"GO:0047274"}


id: GO:1905028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization during AV node cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:BHF_miRNA","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","PMID:19726871","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900826"},{"relation_name":"is_a","term_name":"regulation of membrane depolarization during AV node cell action potential","termid":"GO:1905027"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization during AV node cell action potential","termid":"GO:0086045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization during AV node cell action potential","synonyms":[{"name":"down regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"down regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane depolarization during AV node cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of membrane depolarization during AV node cell action potential","type":"narrow"},{"name":"inhibition of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905028"}


id: FYPO:0007323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah","PMID:32071154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal stress granule assembly during vegetative growth","termid":"FYPO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal stress granule assembly during cellular response to heat","synonyms":[{"name":"normal cytoplasmic stress granule assembly during cellular response to heat","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal stress granule assembly during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat stress","type":"exact"},{"name":"normal stress granule formation during cellular response to heat","type":"exact"}],"termid":"FYPO:0007323"}


id: GO:0090282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle.","definition_xrefs":["PMID:10959837","PMID:10747051","PMID:10894548","GOC:rn","PMID:10899128"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G2/M transition of mitotic cell cycle (obsolete GO:0090282)","synonyms":[{"name":"activation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"activation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"},{"name":"positive regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during G2/M transition of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0090282"}


id: MONDO:0014942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 45","secondary_identifiers":["UMLS:C4310691","OMIM:617153","DOID:0080428","GARD:16203","MEDGEN:934658"],"synonyms":[{"name":"DEE45","type":"exact"},{"name":"EIEE45","type":"exact"},{"name":"GABRB1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 45","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRB1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 45","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 45; EIEE45","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 45","type":"exact"}],"termid":"MONDO:0014942","xrefs":{"Monarch":{"xref_id":"0014942"}}}


id: MONDO:1012282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, cattle","secondary_identifiers":["OMIA:001016-9913"],"termid":"MONDO:1012282","xrefs":{"Monarch":{"xref_id":"1012282"}}}


id: PBO:0060793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S4","termid":"PBO:0060793"}


id: MONDO:0007556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized blistering with mottled or reticulate brown pigmentation.","definition_xrefs":["Orphanet:79397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2F, with mottled pigmentation","secondary_identifiers":["ICD9:757.39","OMIM:131960","GARD:9737","MESH:C535959","MEDGEN:140934","SCTID:254180002","DOID:0111346","UMLS:C0432316"],"synonyms":[{"name":"EBS with mottled pigmentation","type":"related"},{"name":"EBS-MP","type":"exact"},{"name":"EBSMP","type":"related"},{"name":"epidermolysis bullosa simplex 2F, with mottled pigmentation","type":"exact"},{"name":"epidermolysis bullosa simplex with mottled pigmentation","type":"exact"},{"name":"speckled hyperpigmentation with punctate palmoplantar keratoses and childhood blistering","type":"related"},{"name":"speckled hyperpigmentation, palmo-plantar punctate keratoses and childhood blistering","type":"related"}],"termid":"MONDO:0007556","xrefs":{"Monarch":{"xref_id":"0007556"}}}


id: MONDO:0017269
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"X-linked form of inherited ichthyosis syndromic form.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked ichthyosis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:281210","GARD:21109","MedDRA:10048063"],"synonyms":[{"name":"X-linked inherited ichthyosis syndromic form","type":"exact"},{"name":"inherited ichthyosis syndromic form, X-linked","type":"exact"}],"termid":"MONDO:0017269","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0017269"}}}


id: PBO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38 (predicted)","termid":"PBO:0000770"}


id: PBO:0059578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1","termid":"PBO:0059578"}


id: MONDO:0016871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 6","secondary_identifiers":["MEDGEN:1826013","Orphanet:261791","UMLS:C5679654","GARD:20794"],"synonyms":[{"name":"partial deletion of chromosome type 6","type":"exact"},{"name":"partial monosomy of chromosome 6","type":"exact"}],"termid":"MONDO:0016871","xrefs":{"Monarch":{"xref_id":"0016871"}}}


id: MONDO:0005338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic outflow obstruction of the eye's drainage canals that can lead to increased internal eye pressure and optic nerve damage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"open-angle glaucoma","secondary_identifiers":["MEDGEN:6611","MESH:D005902","NCIT:C34641","SCTID:46168003","UMLS:C0017612","ICD9:365.13","DOID:1067","EFO:0004190","SCTID:84494001","ICD9:365.1","ICD9:365.10"],"synonyms":[{"name":"POAG","type":"exact"},{"name":"glaucoma simplex","type":"exact"},{"name":"glaucoma, primary open angle","type":"exact"},{"name":"open angle glaucoma","type":"exact"},{"name":"pigmentary glaucoma","type":"exact"},{"name":"primary open angle glaucoma","type":"exact"},{"name":"wide-angle glaucoma","type":"exact"}],"termid":"MONDO:0005338","xrefs":{"Monarch":{"xref_id":"0005338"}}}


id: PBO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 1","termid":"PBO:0044579"}


id: GO:0098715
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101975],"is_not":false,"summary":null,"term":"GO:0098715"}]},"cv_name":"biological_process","definition":"The directed movement of malonic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"malonic acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097406"],"synonyms":[{"name":"malonate import into cell","type":"exact"},{"name":"malonic acid import into cell","type":"exact"}],"termid":"GO:0098715","terms_by_termid":{"GO:0098715":null}}


id: GO:0051462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cortisol secretion","termid":"GO:0051462"}


id: MONDO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ventricular fibrillation (obsolete MONDO:0005400)","termid":"MONDO:0005400","xrefs":{"Monarch":{"xref_id":"0005400"}}}


id: MONDO:0009570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, multiple congenital anomalies/dysmorphic syndrome characterized by facial dysmorphsim (prominent superciliary arcs, synophrys, strabismus, large, anteverted ears, large nose, malocclusion of teeth), delayed psychomotor development, intellectual disability and congenital heart defects (e.g. pulmonic stenosis, patent ductus arteriosus, atrial septal defect). Additional features include thorax deformation (pectus excavatum/carinatum), kyphoscoliosis, diastasis recti and cryptorchidism.","definition_xrefs":["Orphanet:2471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"McDonough syndrome","secondary_identifiers":["SCTID:715441004","icd11.foundation:1349711155","UMLS:C0796038","GARD:3424","OMIM:248950","MEDGEN:162902","MESH:C538158"],"synonyms":[{"name":"McDonough syndrome","type":"exact"},{"name":"intellectual disability, peculiar facies, kyphoscoliosis, diastasis recti, cryptorchidism, and congenital heart defect","type":"related"},{"name":"mental retardation, peculiar facies, kyphoscoliosis, diastasis recti, cryptorchidism, and congenital heart defect","type":"related"}],"termid":"MONDO:0009570","xrefs":{"Monarch":{"xref_id":"0009570"}}}


id: GO:0044397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of actin cortical patch localization in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cortical patch internalization (obsolete GO:0044397)","termid":"GO:0044397"}


id: GO:0051875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pigment granule localization","synonyms":[{"name":"pigment granule localisation","type":"exact"}],"termid":"GO:0051875"}


id: MONDO:0032794
data:
  {"annotated_genes":["SJAG_00742"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87314],"is_not":false,"summary":null,"term":"MONDO:0032794"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00742":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"leber congenital amaurosis 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16359","MEDGEN:1679297","OMIM:618513","UMLS:C5193139","DOID:0081169"],"synonyms":[{"name":"LCA19","type":"related"},{"name":"LEBER CONGENITAL AMAUROSIS 19","type":"related"}],"termid":"MONDO:0032794","terms_by_termid":{"MONDO:0032794":null},"xrefs":{"Monarch":{"xref_id":"0032794"}}}


id: FYPO:0006986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled up to, but not beyond, the IRL boundary element in the silent mating-type cassette, as in wild type.","definition_xrefs":["PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal spatial extent of heterochromatin assembly to boundary element IRL","synonyms":[{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL at silent mating type locus","type":"exact"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during vegetative growth","type":"exact"}],"termid":"FYPO:0006986"}


id: PBO:0067506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 646, pseudogene","termid":"PBO:0067506"}


id: GO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intermediate cleavage-stage structure of individual or groups of chromosomes that coalesces and fuses with other karyomeres to form a nucleus during interphase. Karyomere formation occurs in blastomeres undergoing rapid cell division.","definition_xrefs":["PMID:22863006","GOC:dph","PMID:12734396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"karyomere","termid":"GO:0061468"}


id: PBO:0061315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS2 stomatin family member, podocin","termid":"PBO:0061315"}


id: MONDO:0015993
data:
  {"annotated_genes":["SJAG_04225","SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014372"},{"annotations":[85443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014669"}]},"cv_name":"mondo","definition":"Inherited retinal dystrophies that belong to the group of pigmentary retinopathies.","definition_xrefs":["Orphanet:1872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01897":null,"SJAG_04225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050572","OMIMPS:120970","GARD:10790","MEDGEN:896366","NANDO:1200937","ICD10CM:H35.5","UMLS:C4085590","MESH:D000071700"],"synonyms":[{"name":"CRD","type":"exact"},{"name":"cone rod dystrophy","type":"related"},{"name":"cone-rod retinal dystrophy","type":"exact"}],"termid":"MONDO:0015993","terms_by_termid":{"MONDO:0014372":null,"MONDO:0014669":null},"xrefs":{"Monarch":{"xref_id":"0015993"}}}


id: PBO:0068227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 534","termid":"PBO:0068227"}


id: PBO:0041938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 6","termid":"PBO:0041938"}


id: GO:0003882
data:
  {"annotated_genes":["SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67425],"is_not":false,"summary":null,"term":"GO:0003882"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + L-serine = CMP + O-sn-phosphatidyl-L-serine.","definition_xrefs":["EC:2.7.8.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"CDP-diacylglycerol-serine O-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:PHOSPHASERSYN-RXN","RHEA:16913"],"synonyms":[{"name":"CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride:serine phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"related"},{"name":"PS synthase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"related"},{"name":"phosphatidylserine synthase activity","type":"related"},{"name":"phosphatidylserine synthetase activity","type":"related"},{"name":"serine exchange enzyme","type":"broad"}],"termid":"GO:0003882","terms_by_termid":{"GO:0003882":null}}


id: GO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell as part of an inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion","termid":"GO:0001820"},{"relation_name":"part_of","term_name":"serotonin production involved in inflammatory response","termid":"GO:0002351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin secretion involved in inflammatory response","synonyms":[{"name":"serotonin release involved in inflammatory response","type":"related"},{"name":"serotonin secretion involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002442"}


id: PBO:0117413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 8","termid":"PBO:0117413"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["EC:4.2.99.20","RHEA:25597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R08166","MetaCyc:RXN-9310"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: MONDO:0009092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inherited leukodystrophy characterized by progressive presenile dementia associated with recurrent bone fractures due to polycystic osseous lesions of the lower and upper extremities.","definition_xrefs":["Orphanet:2770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephaly","secondary_identifiers":["SCTID:702347001","UMLS:C1857316","DOID:0090112","OMIMPS:221770","NANDO:1200658","MEDGEN:387795","ICD9:758.89","GARD:9921"],"synonyms":[{"name":"NHD","type":"exact"},{"name":"Nasu-Hakola disease","type":"exact"},{"name":"PLO-SL","type":"exact"},{"name":"PLOSL","type":"exact"},{"name":"brain-bone-fat disease","type":"related"},{"name":"dementia, prefrontal, with bone cysts","type":"related"},{"name":"dementia, progressive, with lipomembranous polycystic osteodysplasia","type":"related"},{"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy","type":"exact"},{"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephaly","type":"exact"},{"name":"presenile dementia with bone cysts","type":"exact"},{"name":"progressive dementia with lipomembranous polycystic osteodysplasia; brain-bone-fat disease","type":"exact"}],"termid":"MONDO:0009092","xrefs":{"Monarch":{"xref_id":"0009092"}}}


id: PBO:0044004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 3","termid":"PBO:0044004"}


id: GO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid kinase activity","termid":"GO:0043550"}


id: PBO:0040803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE40 antisense RNA 1","termid":"PBO:0040803"}


id: MONDO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 7","secondary_identifiers":["MEDGEN:1780408","GARD:18674","OMIM:619209","UMLS:C5543106"],"synonyms":[{"name":"EKVP7","type":"exact"},{"name":"erythrokeratodermia variabilis et progressiva 7","type":"exact"}],"termid":"MONDO:0030941","xrefs":{"Monarch":{"xref_id":"0030941"}}}


id: GO:1901116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cephamycin C.","definition_xrefs":["GOC:yaf","UniPathway:UPA00183","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"cephamycin C metabolic process","synonyms":[{"name":"cephamycin C metabolism","type":"exact"}],"termid":"GO:1901116"}


id: PBO:0076333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 2","termid":"PBO:0076333"}


id: PBO:0075838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSTR5 antisense RNA 1","termid":"PBO:0075838"}


id: MONDO:0019407
data:
  {"annotated_genes":["SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86727],"is_not":false,"summary":null,"term":"MONDO:0019407"}]},"cv_name":"mondo","definition":"A bone development disease characterized by early developmental delay primarily involving speech, distinct facial features, short stature, brachydactyly, clubfoot deformities, cataracts, and microcephaly that has material basis in heterozygous mutation in COG4 on chromosome 16q22.1.","definition_xrefs":["PMID:30290151","ECO:0007645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"microcephalic osteodysplastic dysplasia, Saul-Wilson type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618150","UMLS:C1300285","DOID:0111673","icd11.foundation:738688839","GARD:16736","MEDGEN:722057","Orphanet:85172"],"synonyms":[{"name":"SWILS","type":"exact"},{"name":"Saul-Wilson syndrome","type":"exact"},{"name":"microcephalic osteodysplastic dysplasia","type":"exact"},{"name":"microcephalic osteodysplastic dysplasia, Saul-Wilson type","type":"exact"}],"termid":"MONDO:0019407","terms_by_termid":{"MONDO:0019407":null},"xrefs":{"Monarch":{"xref_id":"0019407"}}}


id: PBO:0058228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4518","termid":"PBO:0058228"}


id: PBO:0059628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 2","termid":"PBO:0059628"}


id: PBO:0089940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random septum position protein, DNAJ domain protein Rsp1","termid":"PBO:0089940"}


id: PBO:0059523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6","termid":"PBO:0059523"}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: PBO:0030179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_3'-5'-exoribonuclease_activity","termid":"PBO:0030179"}


id: PATO:0000648
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being blocked or filled with obstacles or an obstacle.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstructed","termid":"PATO:0000648"}


id: MONDO:0015299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asherman syndrome","secondary_identifiers":["GARD:5853","MEDGEN:57629","SCTID:48236007","UMLS:C0156372","NORD:811","Orphanet:137686","icd11.foundation:2022431339","MedDRA:10053868","MedDRA:10022821"],"synonyms":[{"name":"Asherman syndrome","type":"exact"},{"name":"Asherman's Syndrome","type":"exact"},{"name":"Asherman's syndrome","type":"related"},{"name":"intrauterine adhesions","type":"exact"},{"name":"intrauterine synechiae","type":"exact"},{"name":"uterine synechiae","type":"related"}],"termid":"MONDO:0015299","xrefs":{"Monarch":{"xref_id":"0015299"}}}


id: GO:0032153
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id: GO:0014009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of glial cells by cell division, resulting in the expansion of their population. Glial cells exist throughout the nervous system, and include Schwann cells, astrocytes, and oligodendrocytes among others.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell proliferation","synonyms":[{"name":"glia proliferation","type":"exact"}],"termid":"GO:0014009"}


id: GO:2000345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte proliferation","termid":"GO:2000345"}


id: PBO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine 5'-nucleotidase","termid":"PBO:0089703"}


id: MONDO:0015514
data:
  {"annotated_genes":["SJAG_00301","SJAG_04738","SJAG_03051","SJAG_02294","SJAG_03698","SJAG_04398","SJAG_04270","SJAG_03418","SJAG_02690","SJAG_04285","SJAG_03597","SJAG_04950","SJAG_04703","SJAG_03720","SJAG_04110","SJAG_04148","SJAG_00103","SJAG_00377","SJAG_04114","SJAG_02339","SJAG_02954","SJAG_02829","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[85760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[87215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014455"},{"annotations":[86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[86248,86247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[87345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"},{"annotations":[85852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[86362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"},{"annotations":[85979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86768,86769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[86064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[86465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[87360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86953,86954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00301":null,"SJAG_00321":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02829":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04110":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04270":null,"SJAG_04285":null,"SJAG_04398":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary endocrine growth disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842942","GARD:20012","Orphanet:156643","MESH:D006130","UMLS:C5680637"],"synonyms":[{"name":"genetic endocrine growth disease","type":"exact"},{"name":"growth disorder","type":"exact"}],"termid":"MONDO:0015514","terms_by_termid":{"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009258":null,"MONDO:0009514":null,"MONDO:0010350":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013310":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014455":null,"MONDO:0014497":null,"MONDO:0014843":null,"MONDO:0026763":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0030886":null,"MONDO:0032787":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0015514"}}}


id: PBO:0066158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 pseudogene 1","termid":"PBO:0066158"}


id: GO:0015857
data:
  {"annotated_genes":["SJAG_04714","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88433],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[95869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of uracil, 2,4-dioxopyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"uracil transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015857","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PBO:0046421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPHA5 antisense RNA 1","termid":"PBO:0046421"}


id: MONDO:0006944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inherited kidney disorders characterized by the abnormally elevated levels of amino acids in urine. Genetic mutations of transport proteins result in the defective reabsorption of free amino acids at the proximal renal tubules. Renal aminoaciduria are classified by the specific amino acid or acids involved.","definition_xrefs":["MESH:D000608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal aminoaciduria","secondary_identifiers":["MEDGEN:254","SCTID:35912001","MedDRA:10001939","UMLS:C0002534"],"termid":"MONDO:0006944","xrefs":{"Monarch":{"xref_id":"0006944"}}}


id: MONDO:0800111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent tachypnoe of infancy that presents with with no other airway or parenchymal abnormalities upon scanning (N=80; 63%).","definition_xrefs":["PMID:26474448","PMID:32761949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent tachypnoe of infancy","termid":"MONDO:0800109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent tachypnoe of infancy, usual","synonyms":[{"name":"PTI, usual","type":"exact"}],"termid":"MONDO:0800111","xrefs":{"Monarch":{"xref_id":"0800111"}}}


id: GO:0005034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sensing extracellular osmolarity to initiate a change in cell activity, and spanning the membrane of the cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0038023","GO:0140299"],"is_obsolete":false,"name":"osmosensor activity","termid":"GO:0005034"}


id: GO:1902594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nuclear import which involves another organism.","definition_xrefs":["GOC:jl","GOC:TermGenie","GO_REF:0000089"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism nuclear import (obsolete GO:1902594)","synonyms":[{"name":"multi organism nuclear import","type":"exact"}],"termid":"GO:1902594"}


id: MONDO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are identified.","definition_xrefs":["NCIT:C40354"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"mucinous cystadenocarcinoma","termid":"MONDO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast mucinous cystadenocarcinoma","secondary_identifiers":["DOID:3609","MEDGEN:267769","UMLS:C1511318"],"synonyms":[{"name":"breast mucinous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002705","xrefs":{"Monarch":{"xref_id":"0002705"}}}


id: PBO:0075933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of tumorigenicity 20","termid":"PBO:0075933"}


id: GO:0098780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) in response to the depolarization of one or more mitochondria.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitochondrial depolarisation","secondary_identifiers":["Reactome:R-HSA-9840373"],"termid":"GO:0098780"}


id: GO:0010977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"negatively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection development","synonyms":[{"name":"growth cone collapse","type":"related"},{"name":"negative regulation of neurite biosynthesis","type":"narrow"},{"name":"negative regulation of neurite development","type":"narrow"},{"name":"negative regulation of neurite formation","type":"narrow"},{"name":"negative regulation of neurite growth","type":"narrow"}],"termid":"GO:0010977"}


id: PBO:0076395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 2B","termid":"PBO:0076395"}


id: GO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ITP, inosine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate catabolic process","termid":"GO:0009207"},{"relation_name":"is_a","term_name":"ITP metabolic process","termid":"GO:0046041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ITP catabolic process","synonyms":[{"name":"ITP breakdown","type":"exact"},{"name":"ITP catabolism","type":"exact"},{"name":"ITP degradation","type":"exact"},{"name":"ITP hydrolysis","type":"exact"}],"termid":"GO:0006193"}


id: MONDO:0800486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders that affect the bones secondary to increased levels of minerals or deficient levels of minerals such as calcium, magnesium, phosphorus, and vitamin D. Representative examples are osteomalacia, osteoporosis, and Paget disease.","definition_xrefs":["NCIT:C97045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic bone disorder","secondary_identifiers":["MEDGEN:2699","UMLS:C0005944"],"termid":"MONDO:0800486","xrefs":{"Monarch":{"xref_id":"0800486"}}}


id: MOD:00437
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a farnesyl group.","definition_xrefs":["DeltaMass:0","PubMed:15609361","Unimod:44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"farnesylated residue","synonyms":[{"name":"FarnRes","type":"exact"},{"name":"Farnesyl","type":"related"},{"name":"Farnesylation","type":"exact"}],"termid":"MOD:00437"}


id: PBO:0012304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 4 (predicted)","termid":"PBO:0012304"}


id: PBO:0087285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain","termid":"PBO:0087285"}


id: PBO:0048620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 1","termid":"PBO:0048620"}


id: MONDO:0800370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"ACD-related short telomere syndrome","termid":"MONDO:0100569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 7","secondary_identifiers":["UMLS:C4225283","MEDGEN:903803"],"synonyms":[{"name":"DKCB7","type":"exact"}],"termid":"MONDO:0800370","xrefs":{"Monarch":{"xref_id":"0800370"}}}


id: MONDO:0016960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of chromosome 9","termid":"MONDO:0016930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 9","secondary_identifiers":["UMLS:C5679702","MEDGEN:1826034","GARD:20880","Orphanet:262905"],"synonyms":[{"name":"partial duplication of chromosome 9q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 9","type":"exact"},{"name":"partial trisomy of chromosome 9q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 9","type":"exact"}],"termid":"MONDO:0016960","xrefs":{"Monarch":{"xref_id":"0016960"}}}


id: GO:0141164
data:
  {"annotated_genes":["SJAG_01816","SJAG_00354","SJAG_04154","SJAG_00984","SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93615,101421,102412,111306,119033],"is_not":false,"summary":null,"term":"GO:0141164"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the mitochondrion, which are targeted for degradation.","definition_xrefs":["PMID:38280230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null,"SJAG_04154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mitochondrial protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141164","terms_by_termid":{"GO:0141164":null}}


id: GO:0030010
data:
  {"annotated_genes":["SJAG_02536","SJAG_02737","SJAG_03581","SJAG_03705","SJAG_03596","SJAG_00140","SJAG_04653","SJAG_00216","SJAG_01901","SJAG_03453","SJAG_00030","SJAG_00845","SJAG_02651","SJAG_03754","SJAG_04724","SJAG_04624","SJAG_01456","SJAG_04509","SJAG_04322","SJAG_00594","SJAG_04522","SJAG_02695","SJAG_03486","SJAG_01794","SJAG_00514","SJAG_03126","SJAG_01373","SJAG_00317","SJAG_03625","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71143,78771,80548,91183,92609,93820,97530,115105],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[107172,111072,118204,103806,116780,88397,100065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[104969,119663,92930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[76700,97308,105190,104861,117243],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[91300],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[112781,104017,107927],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[107928,116884],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[94918,112274],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"}]},"cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00140":null,"SJAG_00216":null,"SJAG_00317":null,"SJAG_00514":null,"SJAG_00594":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01456":null,"SJAG_01794":null,"SJAG_01901":null,"SJAG_02536":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03705":null,"SJAG_03754":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04624":null,"SJAG_04653":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0000283","GO:0030468"],"synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"narrow"},{"name":"cell polarization","type":"exact"}],"termid":"GO:0030010","terms_by_termid":{"GO:0000132":null,"GO:0030010":null,"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: GO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: synephrine = (4-hydroxyphenyl)acetaldehyde + methylammonium.","definition_xrefs":["EC:4.2.1.88","RHEA:32203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"synephrine dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03359","MetaCyc:SYNEPHRINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"1-(4-hydroxyphenyl)-2-(methylamino)ethanol hydro-lyase (methylamine-forming)","type":"related"}],"termid":"GO:0050315"}


id: GO:0014845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the body of stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined.","definition_xrefs":["GOC:mtg_muscle","MA:0002559","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal stomach smooth muscle contraction","termid":"GO:0014828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach body smooth muscle contraction","termid":"GO:0014845"}


id: MOD:00506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(5) HexNAc(2)","definition_xrefs":["Unimod:137#N","RESID:AA0151#var","PubMed:1694179","PubMed:5490222","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-linked glycan core N4-glycosylated asparagine","synonyms":[{"name":"Hex(5)HexNAc(2)","type":"related"},{"name":"N-linked glycan core","type":"related"}],"termid":"MOD:00506"}


id: PBO:0013805
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HUT1","termid":"PBO:0013805"}


id: PBO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_fasciculating_neuron_projection","termid":"PBO:0034172"}


id: PBO:0059997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 17","termid":"PBO:0059997"}


id: PR:Q9P7H2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rex3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.08c","synonyms":[{"name":"Spom972h-rex3","type":"exact"}],"termid":"PR:Q9P7H2"}


id: GO:0032223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, cholinergic","synonyms":[{"name":"down regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"down-regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"downregulation of synaptic transmission, cholinergic","type":"exact"},{"name":"inhibition of synaptic transmission, cholinergic","type":"narrow"}],"termid":"GO:0032223"}


id: GO:0009626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rapid, localized death of plant cells in response to invasion by a pathogen.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"symbiont-induced defense-related programmed cell death","termid":"GO:0034050"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant-type hypersensitive response","synonyms":[{"name":"HR","type":"broad"},{"name":"HR-PCD","type":"exact"},{"name":"plant hypersensitive response","type":"exact"}],"termid":"GO:0009626"}


id: PBO:0067999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 301","termid":"PBO:0067999"}


id: GO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds, acting as an aminopeptidase (notably, cleaving Arg-Xaa bonds) as well as an endopeptidase.","definition_xrefs":["EC:3.4.22.16"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin H activity (obsolete GO:0004215)","synonyms":[{"name":"N-benzoylarginine-beta-naphthylamide hydrolase activity","type":"related"},{"name":"aleurain activity","type":"related"},{"name":"benzoylarginine-naphthylamide (BANA) hydrolase activity","type":"related"},{"name":"cathepsin B3 activity","type":"related"},{"name":"cathepsin BA activity","type":"related"},{"name":"cathepsin Ba","type":"related"},{"name":"cathepsin H activity","type":"exact"}],"termid":"GO:0004215"}


id: PBO:0030028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_adenylyl_cyclase_activity","termid":"PBO:0030028"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: PBO:0066877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 177","termid":"PBO:0066877"}


id: PBO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase D pseudogene 1","termid":"PBO:0043786"}


id: FYPO:0002805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sodium ion import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal sodium import","synonyms":[{"name":"normal sodium import across plasma membrane","type":"exact"},{"name":"normal sodium import during mitotic cell cycle","type":"related"},{"name":"normal sodium import during vegetative growth","type":"exact"},{"name":"normal sodium import into cell","type":"exact"},{"name":"normal sodium ion import into cell","type":"exact"},{"name":"normal sodium uptake","type":"exact"}],"termid":"FYPO:0002805"}


id: MONDO:0019826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete abnormal origin or aberrant course of coronary artery (obsolete MONDO:0019826)","secondary_identifiers":["Orphanet:95493"],"termid":"MONDO:0019826","xrefs":{"Monarch":{"xref_id":"0019826"}}}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: PBO:0027716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy","termid":"PBO:0027716"}


id: GO:0160056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a macropinosome.","definition_xrefs":["PMID:19690049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"macropinosome","termid":"GO:0044354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"macropinosome membrane","termid":"GO:0160056"}


id: MOD:01433
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanone.","definition_xrefs":["PubMed:12715872","PubMed:19196969","ChEBI:17906","RESID:AA0486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanone","synonyms":[{"name":"1-amino-2-propanone","type":"exact"},{"name":"1-aminopropan-2-one","type":"exact"},{"name":"1-aminopropanone","type":"exact"},{"name":"MOD_RES 1-amino-2-propanone","type":"exact"},{"name":"aminoacetone","type":"exact"}],"termid":"MOD:01433"}


id: MONDO:0004220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary endometrioid adenocarcinoma of the endometrium characterized by the presence of spindled malignant epithelial cells.","definition_xrefs":["NCIT:C27850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrium adenocarcinoma","termid":"MONDO:0005461"},{"relation_name":"is_a","term_name":"endometrial endometrioid adenocarcinoma","termid":"MONDO:0006192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial endometrioid adenocarcinoma with spindled epithelial cells","secondary_identifiers":["UMLS:C1336913","MEDGEN:234979","DOID:7436"],"synonyms":[{"name":"endometrial endometrioid adenocarcinoma with spindled epithelial cells","type":"exact"},{"name":"sarcomatoid uterine corpus endometrioid adenocarcinoma","type":"exact"}],"termid":"MONDO:0004220","xrefs":{"Monarch":{"xref_id":"0004220"}}}


id: GO:0043294
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, found in the mitochondria, that in yeast consists of a large and a small subunit. Possesses glutamate synthase (NADH) activity.","definition_xrefs":["PMID:7047525","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex (NADH)","termid":"GO:0031027"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial glutamate synthase complex (NADH)","termid":"GO:0043294"}


id: PBO:0048393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1","termid":"PBO:0048393"}


id: SO:0002171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomeric D-loop is a three-stranded DNA displacement loop that forms at the site where the telomeric 3' single-stranded DNA overhang (formed of the repeat sequence TTAGGG in mammals) is tucked back inside the double-stranded component of telomeric DNA molecule, thus forming a t-loop or telomeric-loop and protecting the chromosome terminus.","definition_xrefs":["PMID:10338204","PMID:24012755","PMID:15071557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_D_loop","synonyms":[{"name":"telomeric D loop","type":"exact"}],"termid":"SO:0002171"}


id: PBO:0059364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A pseudogene 1","termid":"PBO:0059364"}


id: GO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"positive regulation of TLR6 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034153"}


id: MONDO:1010838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactosialidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosialidosis, non-human animal","termid":"MONDO:1010166"},{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis, dog","secondary_identifiers":["OMIA:000400-9615"],"termid":"MONDO:1010838","xrefs":{"Monarch":{"xref_id":"1010838"}}}


id: MONDO:0035117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PUM1-associated developmental disability-ataxia-seizure syndrome (obsolete MONDO:0035117)","secondary_identifiers":["GARD:22351"],"termid":"MONDO:0035117","xrefs":{"Monarch":{"xref_id":"0035117"}}}


id: GO:0009299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular synthesis of messenger RNA (mRNA) from a DNA template.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA transcription","secondary_identifiers":["GO:0061023"],"synonyms":[{"name":"cellular mRNA transcription","type":"exact"},{"name":"mRNA biosynthesis","type":"broad"},{"name":"mRNA biosynthetic process","type":"broad"},{"name":"mRNA synthesis","type":"broad"}],"termid":"GO:0009299"}


id: GO:0019545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including succinate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate metabolic process","termid":"GO:0006105"},{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"arginine catabolic process to succinate","synonyms":[{"name":"arginine breakdown to succinate","type":"exact"},{"name":"arginine degradation to succinate","type":"exact"}],"termid":"GO:0019545"}


id: PBO:0054712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2121","termid":"PBO:0054712"}


id: GO:0010952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidase activity","termid":"GO:0010952"}


id: PBO:0076830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 1","termid":"PBO:0076830"}


id: _global:results_in_determination_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","secondary_identifiers":["GOREL:0001018","RO:0002349"],"termid":"_global:results_in_determination_of"}


id: GO:1901699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen compound","synonyms":[{"name":"cellular response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901699"}


id: PBO:0050391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 15","termid":"PBO:0050391"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: GO:0007309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of an axis in the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"oocyte construction","termid":"GO:0007308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte axis specification","secondary_identifiers":["GO:0048111"],"synonyms":[{"name":"oocyte axis determination","type":"related"}],"termid":"GO:0007309"}


id: PBO:0060980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGF antisense RNA 1","termid":"PBO:0060980"}


id: MONDO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma that arises from the epididymis. It usually presents as a scrotal mass and may be associated with testicular pain.","definition_xrefs":["NCIT:C39957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epididymis cancer","termid":"MONDO:0001016"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epididymal adenocarcinoma","secondary_identifiers":["DOID:10368","MEDGEN:307180","UMLS:C1510784"],"synonyms":[{"name":"adenocarcinoma of the epididymis","type":"exact"},{"name":"epididymal adenocarcinoma","type":"exact"},{"name":"epididymis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001017","xrefs":{"Monarch":{"xref_id":"0001017"}}}


id: GO:0002184
data:
  {"annotated_genes":["SJAG_00338","SJAG_01696","SJAG_04283","SJAG_02189","SJAG_02812","SJAG_02601","SJAG_05265","SJAG_03949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74173,95140,96813,107491,109474,109475,116330,117797],"is_not":false,"summary":null,"term":"GO:0002184"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in the cytoplasm, usually in response to a termination codon.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00338":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02812":null,"SJAG_03949":null,"SJAG_04283":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"cytoplasmic translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0002184","terms_by_termid":{"GO:0002184":null}}


id: FYPO:0003656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to vanadate ions (VO4(3-)). Cells stop growing (and may die) at a concentration of vanadate ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to vanadate","secondary_identifiers":["FYPO:0000718"],"synonyms":[{"name":"hypersensitive to trisodium vanadate","type":"narrow"},{"name":"hypersensitive to vanadate","type":"exact"},{"name":"sensitive to sodium orthovanadate","type":"narrow"},{"name":"sensitive to trisodium vanadate","type":"narrow"},{"name":"sensitive to trisodium vanadate during mitotic cell cycle","type":"related"},{"name":"sensitive to trisodium vanadate during vegetative growth","type":"narrow"},{"name":"sensitive to vanadate during mitotic cell cycle","type":"related"},{"name":"sensitive to vanadate during vegetative growth","type":"exact"},{"name":"sensitive to vanadate ions","type":"exact"},{"name":"sensitive to vanadate(3-)","type":"exact"},{"name":"sensitive to vanadium oxoanion","type":"broad"}],"termid":"FYPO:0003656"}


id: PATO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated","termid":"PATO:0001154"}


id: MONDO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that involves a brain ventricle. It may be a primary neoplasm arising from a brain ventricle, a metastasis from a distant anatomic site, or an extension of an invasive neoplasm from an adjacent brain structure.","definition_xrefs":["NCIT:C2937"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cerebral ventricle cancer","secondary_identifiers":["SCTID:126958000","ICD9:191.5","MESH:D002551","UMLS:C0007798","DOID:3541","MEDGEN:3325"],"synonyms":[{"name":"brain neoplasms, intraventricular","type":"exact"},{"name":"brain ventricle cancer","type":"exact"},{"name":"cancer of brain ventricle","type":"exact"},{"name":"cerebral ventricle neoplasm","type":"exact"},{"name":"intraventricular brain neoplasm","type":"exact"},{"name":"intraventricular brain neoplasms","type":"exact"},{"name":"intraventricular brain tumor","type":"exact"},{"name":"intraventricular brain tumour","type":"exact"},{"name":"intraventricular neoplasm of brain","type":"exact"},{"name":"intraventricular neoplasm of the brain","type":"exact"},{"name":"intraventricular neoplasms","type":"exact"},{"name":"intraventricular tumor of brain","type":"exact"},{"name":"intraventricular tumor of the brain","type":"exact"},{"name":"intraventricular tumour of brain","type":"exact"},{"name":"intraventricular tumour of the brain","type":"exact"},{"name":"malignant brain ventricle neoplasm","type":"exact"},{"name":"malignant neoplasm of brain ventricle","type":"exact"}],"termid":"MONDO:0002682","xrefs":{"Monarch":{"xref_id":"0002682"}}}


id: PBO:0066008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGPS2 antisense RNA 1","termid":"PBO:0066008"}


id: GO:0035842
data:
  {"annotated_genes":["SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111071],"is_not":false,"summary":null,"term":"GO:0035842"}]},"cv_name":"cellular_component","definition":"A cell tip which has existed for at least one complete cell cycle, and at which polarized growth occurs, which is part of a cell that has activated bipolar cell growth (i.e. in which new end take-off, NETO, has taken place). For example, in fission yeast the cell end that existed prior to cell division grows immediately after division, and contains a distinctive complement of proteins including actin cytoskeletal structures.","definition_xrefs":["GOC:expert_jd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"old growing cell tip","termid":"GO:0035840"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"old cell tip after activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"post-NETO old cell end","type":"exact"},{"name":"post-NETO old cell tip","type":"exact"},{"name":"post-new end take-off old cell tip","type":"exact"}],"termid":"GO:0035842","terms_by_termid":{"GO:0035842":null}}


id: PBO:0054034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1365","termid":"PBO:0054034"}


id: PATO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteromedially.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteromedial orientation","synonyms":[{"name":"medioanterior orientation","type":"exact"}],"termid":"PATO:0002514"}


id: GO:0086005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}


id: PATO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitate","termid":"PATO:0001980"}


id: PBO:0004705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like (predicted)","termid":"PBO:0004705"}


id: PBO:0048387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARS1 divergent transcript","termid":"PBO:0048387"}


id: PBO:0079190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 19, pseudogene","termid":"PBO:0079190"}


id: GO:0032442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the NADPH-dependent 7-O-4' reduction of phenylcoumaran lignans to the corresponding diphenols; for example, catalysis of the reaction: dehydrodiconiferyl alcohol + NADPH + H+ = isodihydrodehydrodiconiferyl alcohol + NADP+.","definition_xrefs":["PMID:13129921","PMID:11030549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenylcoumaran benzylic ether reductase activity","synonyms":[{"name":"PCBER activity","type":"exact"}],"termid":"GO:0032442"}


id: GO:1990455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phospholipid phosphatase complex that catalyses the hydrolysis of the second messenger PtdIns (3,4,5)P3. Will also dephosphorylate PtdIns(3,4)P2, PtdIns3P, and Ins(1,3,4,5)P4. Dimerization is critical for its lipid phosphatase function.","definition_xrefs":["GOC:bhm","PMID:24766807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase complex","termid":"GO:1904144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PTEN phosphatase complex","synonyms":[{"name":"phosphatase and tensin homolog","type":"exact"},{"name":"phosphatase and tensin homolog deleted on chromosome ten homodimer","type":"exact"},{"name":"phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN homodimer","type":"exact"}],"termid":"GO:1990455"}


id: PBO:0057974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689f","termid":"PBO:0057974"}


id: GO:0060579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a ventral spinal cord interneuron. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron differentiation","termid":"GO:0021514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron fate commitment","termid":"GO:0060579"}


id: MONDO:0009226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fibrochondrogenesis in which the cause of the disease is a mutation in the COL11A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrochondrogenesis","termid":"MONDO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibrochondrogenesis 1","secondary_identifiers":["DOID:0080672","MEDGEN:479768","OMIM:228520","UMLS:C3278138"],"synonyms":[{"name":"COL11A1 fibrochondrogenesis","type":"exact"},{"name":"FBCG1","type":"related"},{"name":"fibrochondrogenesis 1","type":"exact"},{"name":"fibrochondrogenesis caused by mutation in COL11A1","type":"exact"},{"name":"fibrochondrogenesis type 1","type":"exact"}],"termid":"MONDO:0009226","xrefs":{"Monarch":{"xref_id":"0009226"}}}


id: MONDO:0859176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with motor and speech delay and behavioral abnormalities","secondary_identifiers":["MEDGEN:1794164","OMIM:619470","UMLS:C5561954"],"termid":"MONDO:0859176","xrefs":{"Monarch":{"xref_id":"0859176"}}}


id: PBO:0053267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A1","termid":"PBO:0053267"}


id: PBO:0071681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 13","termid":"PBO:0071681"}


id: GO:0035973
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77319],"is_not":false,"summary":null,"term":"GO:0035973"}]},"cv_name":"biological_process","definition":"The selective degradation of protein aggregates by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:18508269","PMID:25062811","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"aggrephagy","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9646399","GO:0035972"],"termid":"GO:0035973","terms_by_termid":{"GO:0035973":null}}


id: GO:0015606
data:
  {"annotated_genes":["SJAG_02060","SJAG_02125","SJAG_02059"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70982,111247,117650],"is_not":false,"summary":null,"term":"GO:0015606"}]},"cv_name":"molecular_function","definition":"Enables the transfer of spermidine, N-(3-aminopropyl)-1,4-diaminobutane, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"spermidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015606","terms_by_termid":{"GO:0015606":null}}


id: RO:HOM0000020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes that did not experience any duplication after the speciation event that created them.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_1_to_1_homology_relationship_with","termid":"RO:HOM0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_1_orthology_relationship_with","synonyms":[{"name":"1 to 1 orthologous to","type":"exact"},{"name":"1:1 orthology","type":"exact"},{"name":"one-to-one orthology","type":"exact"}],"termid":"RO:HOM0000020"}


id: PBO:0056125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 2","termid":"PBO:0056125"}


id: GO:0015834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycan peptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"peptidoglycan-associated peptide transport","synonyms":[{"name":"murein peptide transport","type":"exact"},{"name":"muropeptide transport","type":"exact"},{"name":"peptidoglycan peptide transport","type":"exact"}],"termid":"GO:0015834"}


id: MONDO:0016947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 10","termid":"MONDO:0016931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 10","secondary_identifiers":["icd11.foundation:1720386511","UMLS:C5679712","GARD:20867","Orphanet:262776","MEDGEN:1826038"],"synonyms":[{"name":"partial duplication of chromosome 10p","type":"exact"},{"name":"partial trisomy of chromosome 10p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 10","type":"exact"}],"termid":"MONDO:0016947","xrefs":{"Monarch":{"xref_id":"0016947"}}}


id: MONDO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy with hyperlaxity is a rare, genetic neuromuscular disease characterized by congenital hypotonia, generalized, slowly progressive muscular weakness, and proximal joint contractures with distal joint hypermobility and hyperlaxity. Scoliosis or rigidity of the spine and delayed motor milestones are also frequently reported. Other manifestations include a long myopathic face and, in rare cases, respiratory failure, mild to moderate intellectual deficiency and short stature. Ambulation may be impaired with time.","definition_xrefs":["Orphanet:371007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy with hyperlaxity","secondary_identifiers":["SCTID:763314009","GARD:21600","UMLS:C4706389","MEDGEN:1633415"],"synonyms":[{"name":"CMDH","type":"exact"}],"termid":"MONDO:0018281","xrefs":{"Monarch":{"xref_id":"0018281"}}}


id: PBO:0054533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1933","termid":"PBO:0054533"}


id: PBO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.17","termid":"PBO:0005652"}


id: GO:0045281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind or react with quinones.","definition_xrefs":["InterPro:IPR000701","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (obsolete GO:0045281)","termid":"GO:0045281"}


id: PBO:0055920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A8, pseudogene","termid":"PBO:0055920"}


id: MONDO:0013864
data:
  {"annotated_genes":["SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86499],"is_not":false,"summary":null,"term":"MONDO:0013864"}]},"cv_name":"mondo","definition":"Any Cornelia de Lange syndrome in which the cause of the disease is a mutation in the RAD21 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01067":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553517","DOID:0080508","OMIM:614701","MEDGEN:766431","GARD:15837"],"synonyms":[{"name":"CDLS4","type":"related"},{"name":"Cornelia DE Lange syndrome 4","type":"related"},{"name":"Cornelia De Lange syndrome type 4","type":"exact"},{"name":"Cornelia de Lange syndrome 4","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in RAD21","type":"exact"},{"name":"RAD21 Cornelia de Lange syndrome","type":"exact"}],"termid":"MONDO:0013864","terms_by_termid":{"MONDO:0013864":null},"xrefs":{"Monarch":{"xref_id":"0013864"}}}


id: PBO:0070110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 24 pseudogene","termid":"PBO:0070110"}


id: FYPO:0008052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitosis in which the dimethylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0005225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during mitosis","termid":"FYPO:0008052"}


id: GO:0001173
data:
  {"annotated_genes":["SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of a DNA-dependent RNA polymerase promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["PMID:18846104","GOC:txnOH","PMID:16826228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"DNA-templated transcriptional start site selection","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001176"],"synonyms":[{"name":"DNA-dependent transcriptional start site selection","type":"exact"},{"name":"transcriptional start site selection at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001173","terms_by_termid":{"GO:0001174":null}}


id: PBO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 5","termid":"PBO:0044663"}


id: PBO:0045097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 2","termid":"PBO:0045097"}


id: GO:0052121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in host environment (obsolete GO:0052121)","synonyms":[{"name":"positive chemotaxis in response to host environment","type":"exact"}],"termid":"GO:0052121"}


id: FYPO:0008258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell surface","termid":"FYPO:0002814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}


id: GO:0015499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of formate from one side of a membrane to the other. Formate is also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"formate transmembrane transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-1","GO:0015659"],"synonyms":[{"name":"formate uptake permease activity","type":"exact"},{"name":"formate uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015499"}


