# terms

id: PBO:0080336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 100 pseudogene","termid":"PBO:0080336"}


id: GO:0004075
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66261],"is_not":false,"summary":null,"term":"GO:0004075"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.","definition_xrefs":["EC:6.3.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"biotin carboxylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:BIOTIN-CARBOXYL-RXN","RHEA:13501"],"synonyms":[{"name":"biotin carboxylase (component of acetyl CoA carboxylase) activity","type":"related"},{"name":"biotin-carboxyl-carrier-protein:carbon-dioxide ligase (ADP-forming) activity","type":"related"}],"termid":"GO:0004075","terms_by_termid":{"GO:0004075":null}}


id: PBO:0030914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_chemical_stimulus_during_vegetative_growth","termid":"PBO:0030914"}


id: GO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors, which occur in the presence of light.","definition_xrefs":["PMID:12242396","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"light-dependent chlorophyll biosynthetic process","synonyms":[{"name":"light dependent chlorophyll biosynthetic process","type":"exact"},{"name":"light-dependent chlorophyll anabolism","type":"exact"},{"name":"light-dependent chlorophyll biosynthesis","type":"exact"},{"name":"light-dependent chlorophyll formation","type":"exact"},{"name":"light-dependent chlorophyll synthesis","type":"exact"}],"termid":"GO:0036067"}


id: GO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"positively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of red or far-red light signaling pathway","synonyms":[{"name":"positive regulation of phytochrome signaling pathway","type":"exact"},{"name":"positive regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090228"}


id: PBO:0053848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1117","termid":"PBO:0053848"}


id: FYPO:0004307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal during metaphase.","definition_xrefs":["PMID:10398680","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0000120","FYPO:0001985"],"is_obsolete":false,"name":"long mitotic spindle during metaphase","synonyms":[{"name":"elongated mitotic spindle during metaphase","type":"exact"},{"name":"increased mitotic spindle length during metaphase","type":"exact"},{"name":"long bipolar mitotic spindle during metaphase","type":"exact"},{"name":"long mitotic spindle during metaphase during vegetative growth","type":"exact"},{"name":"long mitotic spindles during metaphase","type":"exact"},{"name":"long spindle during metaphase of mitosis","type":"exact"},{"name":"long spindle during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004307"}


id: GO:0015923
data:
  {"annotated_genes":["SJAG_05272","SJAG_04850","SJAG_03032","SJAG_02711","SJAG_04851","SJAG_00310","SJAG_01883","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[58127,57889,57526,63173,97264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[79158,67103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_01858":null,"SJAG_01883":null,"SJAG_02711":null,"SJAG_03032":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015923","terms_by_termid":{"GO:0004559":null,"GO:0004571":null,"GO:0008496":null}}


id: GO:0140025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a contractile vacuole membrane and a site of discharge in the plasma membrane. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior to docking and fusion.","definition_xrefs":["PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"contractile vacuole discharge","termid":"GO:0070177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole tethering involved in discharge","synonyms":[{"name":"contractile vacuole tethering to plasma membrane","type":"narrow"}],"termid":"GO:0140025"}


id: PBO:0067453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 577, pseudogene","termid":"PBO:0067453"}


id: MONDO:0019781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, and subependymal giant cell astrocytoma.","definition_xrefs":["NCIT:C60781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrocytoma (excluding glioblastoma)","secondary_identifiers":["ONCOTREE:ASTR","SCTID:147101000119108","UMLS:C0004114","ICDO:9400/3","EFO:0000272","MESH:D001254","MEDGEN:438"],"synonyms":[{"name":"astrocytoma","type":"exact"}],"termid":"MONDO:0019781","xrefs":{"Monarch":{"xref_id":"0019781"}}}


id: PBO:0065964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 antisense RNA 1","termid":"PBO:0065964"}


id: PBO:0074641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 33","termid":"PBO:0074641"}


id: FYPO:0000434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal fermentation","synonyms":[{"name":"fermentative metabolism: normal","type":"related"},{"name":"normal fermentation during mitotic cell cycle","type":"related"},{"name":"normal fermentation during vegetative growth","type":"exact"},{"name":"normal fermentative metabolism","type":"exact"}],"termid":"FYPO:0000434"}


id: PBO:0043932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor required for Sp1 transcriptional activation subunit 5","termid":"PBO:0043932"}


id: MONDO:0009778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar atrophy II, autosomal recessive","secondary_identifiers":["MESH:C564930","OMIM:258300","MEDGEN:376758","UMLS:C1850319"],"synonyms":[{"name":"OPCA II, Fickler-Winkler type","type":"related"},{"name":"olivopontocerebellar atrophy II, autosomal recessive","type":"exact"}],"termid":"MONDO:0009778","xrefs":{"Monarch":{"xref_id":"0009778"}}}


id: PBO:0028405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_medial_cortex_during_vegetative_growth","termid":"PBO:0028405"}


id: GO:0005995
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68269],"is_not":false,"summary":null,"term":"GO:0005995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melibiose metabolic process","termid":"GO:0005994"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"melibiose catabolic process","references_by_uniquename":{"GO_REF:0000117":null},"synonyms":[{"name":"melibiose breakdown","type":"exact"},{"name":"melibiose catabolism","type":"exact"},{"name":"melibiose degradation","type":"exact"}],"termid":"GO:0005995","terms_by_termid":{"GO:0005995":null}}


id: MONDO:0019141
data:
  {"annotated_genes":["SJAG_04865","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87452,87453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"}]},"cv_name":"mondo","definition":"Porokeratosis of Mibelli (PM) is a form of porokeratosis that is characterized by the presence of brown single or multiple annular plaques of varying size, that are sometimes confluent, with a distinctive sharply-defined keratotic border.","definition_xrefs":["Orphanet:735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis of Mibelli","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:80432009","ICD9:757.39","MEDGEN:181842","UMLS:C0949506","GARD:4438"],"termid":"MONDO:0019141","terms_by_termid":{"MONDO:0008293":null},"xrefs":{"Monarch":{"xref_id":"0019141"}}}


id: PBO:0027701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_chromatin_organization_resulting_in_peripheral_chromatin_distribution","termid":"PBO:0027701"}


id: FYPO:0004249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to vacuolar membrane","synonyms":[{"name":"abnormal protein localisation to vacuolar membrane","type":"exact"},{"name":"abnormal protein localization in vacuolar membrane","type":"exact"},{"name":"abnormal protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to vacuole membrane","type":"exact"}],"termid":"FYPO:0004249"}


id: PBO:0053825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1089","termid":"PBO:0053825"}


id: MONDO:0021083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the KIF21A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital fibrosis of extraocular muscles type 1","secondary_identifiers":["DOID:0081015","MEDGEN:376943","UMLS:C1851102","OMIM:135700"],"synonyms":[{"name":"CFEOM1","type":"exact"},{"name":"Feom1 locus","type":"related"},{"name":"KIF21A congenital fibrosis of extraocular muscles","type":"exact"},{"name":"blepharoptosis with absent eye movements","type":"related"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in KIF21A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 1","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3B","type":"related"},{"name":"ophthalmoplegia, congenital","type":"related"}],"termid":"MONDO:0021083","xrefs":{"Monarch":{"xref_id":"0021083"}}}


id: PBO:0005299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WDR89 family WD repeat protein","termid":"PBO:0005299"}


id: MOD:00694
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a halogen atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogen containing residue","synonyms":[{"name":"HalRes","type":"exact"},{"name":"halogenated residue","type":"exact"}],"termid":"MOD:00694"}


id: MONDO:0006359
data:
  {"annotated_genes":["SJAG_00289","SJAG_05346","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87285,87287,87286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"}]},"cv_name":"mondo","definition":"A soft tissue neoplasm composed of perivascular epithelioid cells. Representative examples include angiomyolipoma, clear cell-sugar-tumor of the lung, and lymphangioleiomyomatosis.","definition_xrefs":["NCIT:C38150"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"neoplasm with perivascular epithelioid cell differentiation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:595133","UMLS:C1300127","GARD:22383","EFO:1000464","DOID:2643","MEDGEN:266246","MESH:D054973","ONCOTREE:PECOMA"],"synonyms":[{"name":"PEComa","type":"exact"},{"name":"neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"perivascular epithelioid cell neoplasm","type":"exact"},{"name":"perivascular epithelioid cell tumor","type":"exact"},{"name":"perivascular epithelioid cell tumour","type":"exact"},{"name":"tumor with perivascular epithelioid cell differentiation","type":"exact"},{"name":"tumour with perivascular epithelioid cell differentiation","type":"exact"}],"termid":"MONDO:0006359","terms_by_termid":{"MONDO:0011705":null},"xrefs":{"Monarch":{"xref_id":"0006359"}}}


id: PR:O60068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LYR motif-containing protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13166:SF0","PRO:DNx","OMA:SCHPO03832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein isd11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.06c","secondary_identifiers":["UniProtKB:O60068"],"synonyms":[{"name":"Spom972h-LYRM4","type":"exact"}],"termid":"PR:O60068"}


id: MONDO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexiform neurofibroma","secondary_identifiers":["ICDO:9550/0","DOID:5151","HP:0009732","MEDGEN:64640","SCTID:403818001","ICD9:215.9","MESH:D018318","NCIT:C3797","UMLS:C0206728"],"synonyms":[{"name":"plexiform neurofibroma","type":"exact"},{"name":"plexiform neurofibroma (disease)","type":"exact"}],"termid":"MONDO:0003304","xrefs":{"Monarch":{"xref_id":"0003304"}}}


id: PBO:0047913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q32)","termid":"PBO:0047913"}


id: MONDO:0009837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papilloma of the choroid plexus is a rare benign type of choroid plexus tumor, accounting for 1% of all brain tumors, often occurring in the fourth ventricle (in adults) and the lateral ventricle (in children) but sometimes arising ectopically in the brain parenchyma, and presenting with nausea, vomiting, papilledema, abnormal eye movements, as well as enlarged head circumference, seizures and gait impairment due to an increase in intracranial pressure.","definition_xrefs":["Orphanet:2807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"},{"relation_name":"is_a","term_name":"benign choroid plexus neoplasm","termid":"MONDO:0044764"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus papilloma","secondary_identifiers":["NANDO:2200093","NCIT:C3698","ONCOTREE:CPP","ICDO:9390/0","OMIM:260500","icd11.foundation:1696749652","SCTID:425868004","UMLS:C0205770","DOID:2626","GARD:4214","MedDRA:10008777","MEDGEN:64439","MESH:D020288"],"synonyms":[{"name":"CPP","type":"related"},{"name":"childhood choroid plexus papilloma","type":"narrow"},{"name":"childhood papilloma of choroid plexus","type":"narrow"},{"name":"choroid plexus carcinoma","type":"related"},{"name":"choroid plexus papilloma","type":"exact"},{"name":"choroid plexus papilloma NOS (morphologic abnormality)","type":"narrow"},{"name":"choroid plexus papilloma, no ICD-O subtype","type":"exact"},{"name":"paediatric papilloma of choroid plexus","type":"narrow"},{"name":"papilloma of choroid plexus","type":"related"},{"name":"papilloma of the choroid plexus","type":"exact"},{"name":"papilloma, choroid plexus, benign","type":"related"},{"name":"pediatric papilloma of choroid plexus","type":"narrow"}],"termid":"MONDO:0009837","xrefs":{"Monarch":{"xref_id":"0009837"}}}


id: GO:0007602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons into a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phototransduction","secondary_identifiers":["Wikipedia:Visual_phototransduction"],"synonyms":[{"name":"opsin","type":"related"},{"name":"phototransduction, visible light, light adaptation","type":"narrow"},{"name":"phototrophin mediated phototransduction","type":"narrow"}],"termid":"GO:0007602"}


id: GO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisol stimulus. Cortisol is the major natural glucocorticoid synthesized in the zona fasciculata of the adrenal cortex; it affects the metabolism of glucose, protein, and fats and has appreciable mineralocorticoid activity. It also regulates the immune system and affects many other functions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cortisol","termid":"GO:0051414"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cortisol stimulus","synonyms":[{"name":"cellular response to hydrocortisone stimulus","type":"exact"}],"termid":"GO:0071387"}


id: PBO:0043733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 12","termid":"PBO:0043733"}


id: PBO:0039048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced glycosylation end-product specific receptor","termid":"PBO:0039048"}


id: PBO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 12","termid":"PBO:0048091"}


id: GO:0097611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow that wraps around a dinoflagellate cell; the transverse flagellum lies in it.","definition_xrefs":["PMID:7002229","GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"dinoflagellate cingulum","synonyms":[{"name":"cingulum","type":"broad"},{"name":"girdle","type":"related"},{"name":"transverse groove","type":"related"}],"termid":"GO:0097611"}


id: GO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation without cellular fusion.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in regulation of conjugation with mutual genetic exchange (obsolete GO:0000757)","synonyms":[{"name":"signal transduction involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000757"}


id: PBO:0027801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_JM335","termid":"PBO:0027801"}


id: GO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory tube development","termid":"GO:0030323"}


id: MONDO:0012011
data:
  {"annotated_genes":["SJAG_00210","SJAG_02218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87654,87655],"is_not":false,"summary":null,"term":"MONDO:0012011"}]},"cv_name":"mondo","definition":"Any coronary artery disease in which the cause of the disease is a mutation in the MEF2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_02218":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary artery disease, autosomal dominant, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:330802","MESH:C564258","UMLS:C1842247","OMIM:608320"],"synonyms":[{"name":"ADCAD1","type":"related"},{"name":"MEF2A coronary artery disease","type":"exact"},{"name":"coronary artery disease caused by mutation in MEF2A","type":"exact"},{"name":"coronary artery disease with myocardial infarction","type":"related"},{"name":"coronary artery disease, autosomal dominant, 1","type":"exact"},{"name":"coronary artery disease, autosomal dominant, type 1","type":"exact"}],"termid":"MONDO:0012011","terms_by_termid":{"MONDO:0012011":null},"xrefs":{"Monarch":{"xref_id":"0012011"}}}


id: GO:0035350
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The process in which flavin-adenine dinucleotide (FAD) is transported across a membrane. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD transport","termid":"GO:0015883"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"FAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAD membrane transport","type":"exact"}],"termid":"GO:0035350","terms_by_termid":{"GO:1990548":null}}


id: PBO:0058679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6807","termid":"PBO:0058679"}


id: FYPO:0000994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphatidylinositol-4-phosphate level","termid":"FYPO:0001015"},{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"increased PI-4-P accumulation","type":"related"},{"name":"increased cellular PI(4)P level","type":"exact"},{"name":"increased cellular PI-4-P level","type":"exact"},{"name":"increased cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000994"}


id: PBO:0002585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum resident protein required for packaging into COPII vesicles (predicted)","termid":"PBO:0002585"}


id: PBO:0057460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 579","termid":"PBO:0057460"}


id: GO:0003905
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[101901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[101902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA with alkylated base + H2O = DNA with abasic site + alkylated base. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar to remove an alkylated base, leaving an apyrimidinic or apurinic site.","definition_xrefs":["GOC:elh","EC:3.2.2.21","PMID:10872450","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0140097","GO:0016798"],"is_obsolete":false,"name":"alkylbase DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0004036","MetaCyc:3.2.2.21-RXN"],"synonyms":[{"name":"3-methyladenine DNA glycosylase II","type":"related"},{"name":"AlkA","type":"related"},{"name":"DNA glycosidase II activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase II activity","type":"exact"},{"name":"DNA-3-methyladenine glycosylase II","type":"related"},{"name":"alkylated-DNA glycohydrolase (releasing methyladenine and methylguanine)","type":"broad"},{"name":"alkylbase DNA glycosidase activity","type":"exact"},{"name":"deoxyribonucleate 3-methyladenine glycosidase II","type":"related"}],"termid":"GO:0003905","terms_by_termid":{"GO:0008725":null,"GO:0043916":null,"GO:0052820":null}}


id: PBO:0047072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member A","termid":"PBO:0047072"}


id: PBO:0073366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 1","termid":"PBO:0073366"}


id: MONDO:0006251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inclusion body fibromatosis (obsolete MONDO:0006251)","termid":"MONDO:0006251","xrefs":{"Monarch":{"xref_id":"0006251"}}}


id: PBO:0116639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF guanine nucleotide exchange factor 2","termid":"PBO:0116639"}


id: MONDO:0017359
data:
  {"annotated_genes":["SJAG_02641","SJAG_03258","SJAG_01597","SJAG_00737","SJAG_03560"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009787"},{"annotations":[85704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012435"},{"annotations":[87354,87353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044723"},{"annotations":[85643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044724"}]},"cv_name":"mondo","definition":"A group of five inherited disorders caused by mutations in the AUH, DNAJC19, OPA3, and TAZ genes. The disorders are characterized by impairment in the function of mitochondria, resulting in the accumulation and excretion of 3-methylglutaconic acid, and the presence of 3-methylglutaric acid in the urine.","definition_xrefs":["NCIT:C98678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01597":null,"SJAG_02641":null,"SJAG_03258":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylglutaconic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200496","UMLS:C3696376","OMIMPS:250950","icd11.foundation:1008261602","MEDGEN:777186","MESH:C579867","DOID:0060336","Orphanet:289902","GARD:12966","NANDO:1200989","SCTID:237950009","ICD10CM:E71.111"],"termid":"MONDO:0017359","terms_by_termid":{"MONDO:0009787":null,"MONDO:0012435":null,"MONDO:0044723":null,"MONDO:0044724":null},"xrefs":{"Monarch":{"xref_id":"0017359"}}}


id: PBO:0071017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 19","termid":"PBO:0071017"}


id: PBO:0058359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4732","termid":"PBO:0058359"}


id: PBO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 1","termid":"PBO:0045099"}


id: MOD:01380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tryptophan residue by a thioether bond to form 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide.","definition_xrefs":["RESID:AA0451","PubMed:11805306","PubMed:363352","PubMed:18552824","PubMed:4865716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","synonyms":[{"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","type":"exact"},{"name":"2-((2R)-2-amino-2carboxyethyl)sulfinyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"6'-hydroxy-S-oxo-tryptathionine","type":"exact"},{"name":"CROSSLNK 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys)","type":"exact"}],"termid":"MOD:01380"}


id: GO:0004364
data:
  {"annotated_genes":["SJAG_00238","SJAG_05181","SJAG_00179","SJAG_03863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75068,77530,78970,114175],"is_not":false,"summary":null,"term":"GO:0004364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.","definition_xrefs":["EC:2.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00179":null,"SJAG_00238":null,"SJAG_03863":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"glutathione transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9026911","MetaCyc:GSHTRAN-RXN","Reactome:R-HSA-9026901","Reactome:R-HSA-3301943","Reactome:R-HSA-9026777","Reactome:R-HSA-9011595","Reactome:R-HSA-9748996","Reactome:R-HSA-9753280","Reactome:R-HSA-176054","Reactome:R-HSA-176059","Reactome:R-HSA-9026780","Reactome:R-HSA-5423653"],"synonyms":[{"name":"RX:glutathione R-transferase activity","type":"related"},{"name":"S-(hydroxyalkyl)glutathione lyase activity","type":"related"},{"name":"glutathione S-alkyl transferase activity","type":"related"},{"name":"glutathione S-alkyltransferase activity","type":"related"},{"name":"glutathione S-aralkyltransferase activity","type":"related"},{"name":"glutathione S-aryltransferase activity","type":"related"},{"name":"glutathione S-transferase activity","type":"related"},{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0004364","terms_by_termid":{"GO:0004364":null}}


id: PBO:0046495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERGIC and golgi 2","termid":"PBO:0046495"}


id: GO:0046512
data:
  {"annotated_genes":["SJAG_02429","SJAG_01057","SJAG_02706","SJAG_02305","SJAG_00880","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74054,77214,79246,97234,106312,110023],"is_not":false,"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["GOC:ma","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingosine metabolic process","termid":"GO:0006670"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sphingosine anabolism","type":"exact"},{"name":"sphingosine biosynthesis","type":"exact"},{"name":"sphingosine formation","type":"exact"},{"name":"sphingosine synthesis","type":"exact"}],"termid":"GO:0046512","terms_by_termid":{"GO:0046512":null}}


id: PBO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 3 (pseudogene)","termid":"PBO:0044716"}


id: PBO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035752"}


id: GO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface.","definition_xrefs":["ISBN:0879694971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated virion attachment to host cell","synonyms":[{"name":"virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:0046813"}


id: PR:P08965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.03c","secondary_identifiers":["PR:000027568","UniProtKB:P08965"],"synonyms":[{"name":"SPAC27D7.03C","type":"related"},{"name":"Spom972h-mei2","type":"exact"}],"termid":"PR:P08965"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: GO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-glutamate:ammonia ligase (ADP-forming)] = diphosphate + adenylyl-[L-glutamate:ammonia ligase (ADP-forming)].","definition_xrefs":["EC:2.7.7.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"[glutamate-ammonia-ligase] adenylyltransferase activity","secondary_identifiers":["RHEA:18589","MetaCyc:GSADENYLATION-RXN"],"synonyms":[{"name":"ATP:L-glutamate:ammonia ligase (ADP-forming) adenylyltransferase activity","type":"related"},{"name":"ATP:[glutamate-ammonia-ligase] adenylyltransferase activity","type":"exact"},{"name":"ATP:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"adenosine triphosphate:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"glutamate-ammonia-ligase adenylyltransferase activity","type":"exact"},{"name":"glutamine-synthetase adenylyltransferase activity","type":"related"}],"termid":"GO:0008882"}


id: PBO:0072875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salvador family WW domain containing protein 1","termid":"PBO:0072875"}


id: GO:0006726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment biosynthetic process","synonyms":[{"name":"eye pigment anabolism","type":"exact"},{"name":"eye pigment biosynthesis","type":"exact"},{"name":"eye pigment formation","type":"exact"},{"name":"eye pigment synthesis","type":"exact"}],"termid":"GO:0006726"}


id: PBO:0046193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin","termid":"PBO:0046193"}


id: MONDO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of spindle to ovoid cells which have morphologic and immunophenotypic characteristics of follicular dendritic cells. It affects lymph nodes and other sites including the tonsils, gastrointestinal tract, spleen, liver, soft tissues, skin, and oral cavity. It usually behaves as a low grade sarcoma. Treatment options include complete surgical removal of the tumor with or without adjuvant chemotherapy or radiotherapy. Recurrences have been reported in up to half of the cases.","definition_xrefs":["NCIT:C9281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"follicular dendritic cell sarcoma","secondary_identifiers":["UMLS:C1260325","GARD:19081","ONCOTREE:FDCS","ICDO:9758/1","DOID:6262","EFO:0007276","NANDO:2200034","ICDO:9758/3","Orphanet:86902","MESH:D054740","icd11.foundation:149373156","icd11.foundation:15445528","MEDGEN:220355"],"synonyms":[{"name":"follicular Dendritic cell sarcoma","type":"exact"},{"name":"follicular Dendritic cell sarcoma/tumor","type":"exact"},{"name":"follicular dendritic cell sarcoma","type":"exact"},{"name":"follicular dendritic cell tumor","type":"exact"},{"name":"follicular dendritic cell tumour","type":"exact"},{"name":"sarcoma of follicular dendritic cell","type":"exact"}],"termid":"MONDO:0005764","xrefs":{"Monarch":{"xref_id":"0005764"}}}


id: FYPO:0007097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly takes place in one or more abnormal locations. An actin fusion focus normally forms during mating at the site where the two cells will fuse. Ectopic fusion foci often form near actin cortical patches, and may also have abnormal composition.","definition_xrefs":["PMID:31495586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"ectopic actin fusion focus assembly","synonyms":[{"name":"ectopic actin fusion focus formation","type":"exact"},{"name":"mislocalized actin fusion focus assembly","type":"exact"}],"termid":"FYPO:0007097"}


id: FYPO:0001217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear import is abnormal. Nuclear import is the directed movement of any substance out of the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport during vegetative growth","termid":"FYPO:0000518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear import","synonyms":[{"name":"abnormal nuclear import during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear import during vegetative growth","type":"exact"}],"termid":"FYPO:0001217"}


id: MONDO:1012605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in dogs due to a glycogen branching enzyme (GBE) deficiency.","definition_xrefs":["OMIA:000420-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease IV, dog","termid":"MONDO:1012605","xrefs":{"Monarch":{"xref_id":"1012605"}}}


id: PBO:0110172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Sls1","termid":"PBO:0110172"}


id: GO:0090148
data:
  {"annotated_genes":["SJAG_02848","SJAG_03464","SJAG_02384","SJAG_05261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102823,95304,103081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090149"},{"annotations":[100287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099050"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the separation of a single continuous membrane into two membranes.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null,"SJAG_03464":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane scission","type":"exact"}],"termid":"GO:0090148","terms_by_termid":{"GO:0090149":null,"GO:0099050":null}}


id: GO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"},{"relation_name":"part_of","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"platelet aggregation","synonyms":[{"name":"blood platelet aggregation","type":"exact"},{"name":"thrombocyte aggregation","type":"related"}],"termid":"GO:0070527"}


id: MONDO:0015393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasal ganglioglioma is a rare tumor, presenting in newborns, containing both neuronal and astrocytic components and that can be endonasal, extranasal or both. It is usually identified as a nasal mass that may cause feeding difficulties and nasal obstruction.","definition_xrefs":["Orphanet:141115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"ganglioglioma","termid":"MONDO:0016733"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal ganglioglioma","secondary_identifiers":["GARD:19950","MEDGEN:1786513","icd11.foundation:40917416","UMLS:C5548206"],"termid":"MONDO:0015393","xrefs":{"Monarch":{"xref_id":"0015393"}}}


id: MONDO:0009900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polysyndactyly-cardiac malformation syndrome is characterized by polysyndactyly, hexadactyly (duplication of the first toe) and complex cardiac malformation (including atrial and ventricular septal defect, single ventricle, aortic dextroposition, or dilation of the right heart). It has been described in six patients from three unrelated families. Other manifestations were present in some patients (i.e. facial dysmorphism, hepatic cysts).","definition_xrefs":["Orphanet:2934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysyndactyly-cardiac malformation syndrome","secondary_identifiers":["OMIM:263630","MESH:C564875","SCTID:724066002","UMLS:C1849719","GARD:4428","MEDGEN:337895"],"synonyms":[{"name":"Bonneau syndrome","type":"exact"},{"name":"polysyndactyly cardiac malformation","type":"related"},{"name":"polysyndactyly with CARDIAC malformation","type":"related"}],"termid":"MONDO:0009900","xrefs":{"Monarch":{"xref_id":"0009900"}}}


id: PBO:0003651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random septum position protein Rsp1","termid":"PBO:0003651"}


id: PBO:0055961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 74B","termid":"PBO:0055961"}


id: PBO:0049694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin associated protein 1","termid":"PBO:0049694"}


id: GO:0120255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefinic compound biosynthetic process","synonyms":[{"name":"alkene substituted compound anabolic process","type":"exact"},{"name":"alkene substituted compound anabolism","type":"exact"},{"name":"alkene substituted compound biosynthesis","type":"exact"},{"name":"alkene substituted compound biosynthetic process","type":"exact"},{"name":"alkene substituted compound synthesis","type":"exact"}],"termid":"GO:0120255"}


id: GO:0046745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a capsid acquires another membrane envelope, subsequent to acquiring an initial membrane envelope.","definition_xrefs":["ISBN:0781718325","PMID:11533156","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral capsid secondary envelopment","secondary_identifiers":["GO:0046748","GO:0046769","GO:0046746","GO:0046747","GO:0046770","GO:0046768"],"synonyms":[{"name":"ER membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"Golgi membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"endoplasmic reticulum membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"inner nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"outer nuclear membrane viral budding during viral capsid re-envelopment","type":"exact"},{"name":"plasma membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"viral budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from outer nuclear membrane during viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane during viral capsid re-envelopment","type":"related"},{"name":"viral capsid re-envelopment","type":"related"},{"name":"virus budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from outer nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from plasma membrane during viral capsid re-envelopment","type":"related"}],"termid":"GO:0046745"}


id: PBO:0079147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 9","termid":"PBO:0079147"}


id: RO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities in which the processes executed by the two entities are causally connected.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with","synonyms":[{"name":"in pairwise interaction with","type":"exact"}],"termid":"RO:0002434"}


id: GO:1904707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell proliferation","termid":"GO:0048661"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"activation of VSMC proliferation","type":"narrow"},{"name":"activation of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"positive regulation of VSMC proliferation","type":"exact"},{"name":"positive regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up regulation of VSMC proliferation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up-regulation of VSMC proliferation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"upregulation of VSMC proliferation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904707"}


id: FYPO:0006920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination at replication fork barriers is decreased.","definition_xrefs":["PMID:28586299","PomBase:mah","PMID:31149897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased DNA recombination at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased DNA recombination at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased DNA recombination at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"decreased recombination at mitotic DNA replication fork barriers","type":"exact"},{"name":"reduced DNA recombination at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006920"}


id: GO:0140114
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114047],"is_not":false,"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a fluoride. These may include chemical modification or transport of fluoride away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to fluoride","termid":"GO:1902618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140114","terms_by_termid":{"GO:0140114":null}}


id: PBO:0070618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 2","termid":"PBO:0070618"}


id: PBO:0071337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 1","termid":"PBO:0071337"}


id: PBO:0088920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-mediated transport","termid":"PBO:0088920"}


id: PATO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complexity quality in a bearer by virtue of the bearer's having few parts or being complicated or compound.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complexity","termid":"PATO:0001502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple","termid":"PATO:0001503"}


id: PBO:0063911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase catalytic subunit type 3","termid":"PBO:0063911"}


id: MONDO:0017517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of toes","termid":"MONDO:0017452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of toes, unilateral","secondary_identifiers":["icd11.foundation:714196201","Orphanet:295132"],"synonyms":[{"name":"short toes, unilateral","type":"exact"}],"termid":"MONDO:0017517","xrefs":{"Monarch":{"xref_id":"0017517"}}}


id: PR:Q10356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein DJ-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02092","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase DJ-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.03c","secondary_identifiers":["UniProtKB:Q10356"],"synonyms":[{"name":"Spom972h-PARK7","type":"exact"},{"name":"heat shock protein 31 homolog 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein DJ-1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10356"}


id: PBO:0074996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-7","termid":"PBO:0074996"}


id: PBO:0116292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transcription elongation factor; DEAD-box protein; required for efficient splicing of mitochondrial Group I and II introns; non-polar RNA helicase that also facilities strand annealing; promotes RNA folding by stabilizing an early assembly intermediate; binds G-quadruplex (G4) nucleic acids and destabilizes G4RNA structures","termid":"PBO:0116292"}


id: MONDO:0018009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hypoproteinemic hypertrophic gastropathy is a rare gastroesophageal disease characterized by diffusely enlarged gastric folds, excessive mucus secretion, normal serum protein and gastric TGF-alpha levels. Patients typically present anemia, abdominal pain not related to eating or bowel habits and absence of peripheral edema.","definition_xrefs":["Orphanet:329883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"non-hypoproteinemic hypertrophic gastropathy","secondary_identifiers":["GARD:21495","UMLS:C4750834","MEDGEN:1654450"],"synonyms":[{"name":"hypertrophic gastropathy without hypoproteinemia","type":"exact"}],"termid":"MONDO:0018009","xrefs":{"Monarch":{"xref_id":"0018009"}}}


id: PBO:0064939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyglutamine binding protein 1","termid":"PBO:0064939"}


id: GO:0036118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the aggregation, arrangement and bonding together of a hyaluranon cable, a cable structure, surrounding some cell types (e.g. proximal or bronchial tubular epithelial cells), and composed of hyaluranon (HA), a ubiquitous connective tissue glycosaminoglycan.","definition_xrefs":["GOC:yaf","PMID:16900089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"hyaluranon cable assembly","synonyms":[{"name":"HA cable assembly","type":"exact"}],"termid":"GO:0036118"}


id: GO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NADP+ = oxaloacetate + NADPH + H+.","definition_xrefs":["RHEA:10824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-malate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00343","MetaCyc:MALATE-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.82"],"synonyms":[{"name":"(S)-malate:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP malate dehydrogenase activity","type":"related"},{"name":"NADP-linked malate dehydrogenase activity","type":"related"},{"name":"NADP-malate dehydrogenase activity","type":"related"},{"name":"malate NADP dehydrogenase activity","type":"related"},{"name":"malic dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0046554"}


id: PBO:0034798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin N-acetyltransferase/DNA polymerase eta Eso1 fusion protein","termid":"PBO:0034798"}


id: SO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small noncoding RNA of approximately 22 nucleotides in length which may be involved in regulation of gene expression.","direct_ancestors":[{"relation_name":"has_quality","term_name":"miRNA_encoding","termid":"SO:0000571"},{"relation_name":"has_quality","term_name":"stRNA_encoding","termid":"SO:0000656"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_gene","secondary_identifiers":["SO:0001270"],"synonyms":[{"name":"miRNA gene","type":"exact"},{"name":"stRNA gene","type":"exact"},{"name":"stRNA_gene","type":"exact"}],"termid":"SO:0001265"}


id: PBO:0082760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; increases efficiency of first and second step pre-mRNA splicing; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis","termid":"PBO:0082760"}


id: PBO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, involved in translation initiation Psi1","termid":"PBO:0005792"}


id: GO:0043943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation","termid":"GO:0034305"},{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"}


id: GO:0071977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Bacterial-type flagellum-dependent cell motility that results in the smooth movement of a cell through a liquid medium.","definition_xrefs":["GOC:cilia","PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial-type flagellum-dependent cell motility","termid":"GO:0071973"},{"relation_name":"is_a","term_name":"cell swimming","termid":"GO:0071975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum-dependent swimming motility","synonyms":[{"name":"bacterial-type flagellar swimming motility","type":"related"},{"name":"bacterial-type flagellum-mediated cell swimming","type":"exact"}],"termid":"GO:0071977"}


id: GO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c3 (tetraheme) (obsolete GO:0009472)","synonyms":[{"name":"cytochrome c3 (tetraheme)","type":"exact"}],"termid":"GO:0009472"}


id: FYPO:0002440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable distribution is abnormal. The process normally establishes the spatial arrangement of actin cables within the cell. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cable distribution","synonyms":[{"name":"abnormal actin cable distribution during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable distribution during vegetative growth","type":"exact"},{"name":"abnormal actin cable localization","type":"related"},{"name":"abnormal formin-nucleated actin cable distribution","type":"exact"}],"termid":"FYPO:0002440"}


id: MONDO:0014383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tubular aggregate myopathy in which the cause of the disease is a mutation in the ORAI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubular aggregate myopathy","termid":"MONDO:0008051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, tubular aggregate, 2","secondary_identifiers":["OMIM:615883","DOID:0080686","GARD:16026","UMLS:C4014557","MEDGEN:862994"],"synonyms":[{"name":"ORAI1 tubular aggregate myopathy","type":"exact"},{"name":"TAM2","type":"related"},{"name":"myopathy, tubular aggregate, 2","type":"exact"},{"name":"myopathy, tubular aggregate, type 2","type":"exact"},{"name":"tubular aggregate myopathy caused by mutation in ORAI1","type":"exact"}],"termid":"MONDO:0014383","xrefs":{"Monarch":{"xref_id":"0014383"}}}


id: FYPO:0008271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to a histone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal histone binding","termid":"FYPO:0008271"}


id: GO:0044103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose + NADP+ = L-arabinono-1,4-lactone + NADPH + H+.","definition_xrefs":["GOC:jl","PMID:16326697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-arabinose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.376"],"termid":"GO:0044103"}


id: GO:0047154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + D-methylmalonyl-CoA = oxaloacetic acid + propionyl-CoA.","definition_xrefs":["EC:2.1.3.1","MetaCyc:2.1.3.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"methylmalonyl-CoA carboxytransferase activity","secondary_identifiers":["RHEA:20764","UM-BBD_reactionID:r0923"],"synonyms":[{"name":"(S)-2-methyl-3-oxopropanoyl-CoA:pyruvate","type":"related"},{"name":"(S)-2-methyl-3-oxopropanoyl-CoA:pyruvate carboxyltransferase activity","type":"related"},{"name":"(S)-methylmalonyl-CoA:pyruvate carboxyltransferase activity","type":"related"},{"name":"(S)-methylmalonyl-CoA:pyruvate carboxytransferase activity","type":"related"},{"name":"methylmalonyl coenzyme A carboxyltransferase activity","type":"related"},{"name":"methylmalonyl-CoA carboxyltransferase activity","type":"exact"},{"name":"methylmalonyl-CoA transcarboxylase activity","type":"related"},{"name":"oxalacetic transcarboxylase activity","type":"related"},{"name":"transcarboxylase activity","type":"related"}],"termid":"GO:0047154"}


id: PBO:0038964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 5 (putative)","termid":"PBO:0038964"}


id: PBO:0084522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BCH2 has a paralog, CHS6, that arose from the whole genome duplication","termid":"PBO:0084522"}


id: PBO:0058772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7106","termid":"PBO:0058772"}


id: GO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium ions in the cytosol that occurs as part of a PLC-activating G protein-coupled receptor signaling pathway. G-protein-activated PLC hydrolyses phosphatidylinositol-bisphosphate (PIP2) to release diacylglycerol (DAG) and inositol trisphosphate (IP3). IP3 then binds to calcium release channels in the endoplasmic reticulum (ER) to trigger calcium ion release into the cytosol.","definition_xrefs":["GOC:signaling","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway (obsolete GO:0051482)","synonyms":[{"name":"elevation of calcium ion concentration in cytoplasm during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of calcium ion concentration in cytosol during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytosolic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger","type":"exact"},{"name":"elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"},{"name":"positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"}],"termid":"GO:0051482"}


id: MONDO:0013524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bleeding diathesis due to thromboxane synthesis deficiency (obsolete MONDO:0013524)","termid":"MONDO:0013524","xrefs":{"Monarch":{"xref_id":"0013524"}}}


id: GO:1903224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:23154389","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endodermal cell differentiation","synonyms":[{"name":"regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903224"}


id: GO:0015518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: arabinose(out) + H+(out) = arabinose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"arabinose:proton symporter activity","secondary_identifiers":["GO:0015523"],"synonyms":[{"name":"arabinose efflux permease activity","type":"broad"},{"name":"arabinose efflux transmembrane transporter activity","type":"broad"},{"name":"arabinose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015518"}


id: PBO:0041922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR4 divergent transcript","termid":"PBO:0041922"}


id: MOD:00742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a copper atom or a cluster containing copper for hydrogen atoms, or that coordinates a copper ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper containing modified residue","synonyms":[{"name":"CuRes","type":"exact"}],"termid":"MOD:00742"}


id: GO:1901015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3alpha(S)-strictosidine.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"3alpha(S)-strictosidine biosynthetic process","secondary_identifiers":["GO:1901013"],"synonyms":[{"name":"3alpha(S)-strictosidine anabolism","type":"exact"},{"name":"3alpha(S)-strictosidine biosynthesis","type":"exact"},{"name":"3alpha(S)-strictosidine formation","type":"exact"},{"name":"3alpha(S)-strictosidine metabolic process","type":"broad"},{"name":"3alpha(S)-strictosidine metabolism","type":"exact"},{"name":"3alpha(S)-strictosidine synthesis","type":"exact"}],"termid":"GO:1901015"}


id: GO:0106371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + primary fluorescent chlorophyll catabolite + reduced [NADPH--hemoprotein reductase] = formate + 2 H+ + oxidized [NADPH--hemoprotein reductase] + primary fluorescent dioxobilin-type chlorophyll catabolite.","definition_xrefs":["RHEA:67172","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fluorescent chlorophyll catabolite monooxygenase (deformylase) activity","termid":"GO:0106371"}


id: GO:0051606
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal.","definition_xrefs":["GOC:mah","GOC:add","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of stimulus","type":"related"},{"name":"stimulus detection","type":"exact"},{"name":"stimulus sensing","type":"related"}],"termid":"GO:0051606","terms_by_termid":{"GO:0050982":null}}


id: PBO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport_during_vegetative_growth","termid":"PBO:0035867"}


id: PBO:0081158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, FOG family member 2","termid":"PBO:0081158"}


id: MONDO:0019868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 10 is a rare chromosomal anomaly syndrome, with a highly variable phenotype, principally characterized by growth delay, craniofacial dysmorphism (incl. prominent forehead, hypertelorism, upslanting palpebral fissures, blepharophimosis, low-set malformed large ears, high arched palate, cleft lip/palate, retrognathia) and cardiac, renal and skeletal (e.g. radial ray defects, scoliosis) malformations, with death usually occurring neonatally or in early infancy. Other reported features include central nervous system and ear anomalies, as well as facial clefts and anal atresia.","definition_xrefs":["Orphanet:96063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 10 disorder","termid":"MONDO:0700017"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 10","secondary_identifiers":["UMLS:C2931794","MESH:C538292","GARD:19302","MEDGEN:419163","SCTID:764461004"],"synonyms":[{"name":"Mosaic trisomy chromosome 10","type":"exact"},{"name":"Mosaic trisomy type 10","type":"exact"},{"name":"chromosome 10, uniparental disomy","type":"related"},{"name":"mosaic trisomy 10","type":"exact"},{"name":"trisomy 10 mosaicism","type":"exact"},{"name":"uniparental disomy of 10","type":"related"}],"termid":"MONDO:0019868","xrefs":{"Monarch":{"xref_id":"0019868"}}}


id: PBO:0038621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER2 pseudogene 1","termid":"PBO:0038621"}


id: PBO:0072336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 22","termid":"PBO:0072336"}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["Unimod:442#S","RESID:AA0350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: FYPO:0001583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lithium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to lithium","synonyms":[{"name":"resistance to lithium during mitotic cell cycle","type":"related"},{"name":"resistance to lithium during vegetative growth","type":"exact"},{"name":"resistance to lithium ion","type":"exact"},{"name":"resistance to lithium ions","type":"exact"},{"name":"resistant to lithium","type":"exact"}],"termid":"FYPO:0001583"}


id: GO:1901806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucoside.","definition_xrefs":["GOC:TermGenie","PMID:8990303","PMID:16390337","GOC:yaf","Unipathway:UPA00237","PMID:15205427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside biosynthetic process","synonyms":[{"name":"beta-glucoside anabolism","type":"exact"},{"name":"beta-glucoside biosynthesis","type":"exact"},{"name":"beta-glucoside formation","type":"exact"},{"name":"beta-glucoside synthesis","type":"exact"}],"termid":"GO:1901806"}


id: PBO:0039999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 11","termid":"PBO:0039999"}


id: MONDO:0006034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the stomach and is characterized by the presence of malignant cells with glandular and squamous differentiation.","definition_xrefs":["NCIT:C5474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"gastric squamous cell carcinoma","termid":"MONDO:0006230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric adenosquamous carcinoma","secondary_identifiers":["DOID:5635","EFO:1000029","ONCOTREE:STAS","MEDGEN:272661","UMLS:C1333761"],"synonyms":[{"name":"STAS","type":"related"},{"name":"adenosquamous carcinoma of stomach","type":"exact"},{"name":"adenosquamous carcinoma of the stomach","type":"exact"},{"name":"gastric (stomach) adenosquamous cancer","type":"exact"},{"name":"gastric adenosquamous carcinoma","type":"exact"},{"name":"stomach adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006034","xrefs":{"Monarch":{"xref_id":"0006034"}}}


id: PBO:0116745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 related chromatin remodeling ATPase 5","termid":"PBO:0116745"}


id: MONDO:0007226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-nystagmus-cerebellar ataxia syndrome is characterized by brachydactyly, nystagmus and cerebellar ataxia. Intellectual deficit and strabismus are also reported in some patients.","definition_xrefs":["Orphanet:1246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-nystagmus-cerebellar ataxia syndrome","secondary_identifiers":["ICD9:759.89","MESH:C566192","GARD:971","OMIM:113400","SCTID:205828009","UMLS:C1862099","MEDGEN:350589"],"synonyms":[{"name":"Biemond syndrome","type":"exact"},{"name":"Biemond syndrome type 1","type":"related"},{"name":"brachydactyly - nystagmus - cerebellar ataxia","type":"related"},{"name":"brachydactyly, nystagmus and cerebellar ataxia","type":"related"},{"name":"brachydactyly-NYSTAGMUS-cerebellar ataxia","type":"related"}],"termid":"MONDO:0007226","xrefs":{"Monarch":{"xref_id":"0007226"}}}


id: PBO:0091313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC1 kinase family protein, human ADCK5 ortholog, unknown role","termid":"PBO:0091313"}


id: PBO:0060836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-MDP1 readthrough","termid":"PBO:0060836"}


id: PBO:0087698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; phosphorylated by Cdc28p; mutation in the human Orc6p is linked to Meier-Gorlin syndrome","termid":"PBO:0087698"}


id: PBO:0068159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 466","termid":"PBO:0068159"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118414],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"lncRNA catabolic process","termid":"GO:0110064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: PBO:0050147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 3","termid":"PBO:0050147"}


id: PBO:0071554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 19","termid":"PBO:0071554"}


id: PBO:0076624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E like","termid":"PBO:0076624"}


id: PBO:0077817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible nuclear protein 1","termid":"PBO:0077817"}


id: GO:0031258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a lamellipodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"lamellipodium","termid":"GO:0030027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"lamellipodium membrane","termid":"GO:0031258"}


id: FYPO:0000497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitochondrial transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial transport","termid":"FYPO:0000495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased rate of mitochondrial transport","synonyms":[{"name":"decreased rate of mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"decreased rate of mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: decreased rate","type":"related"},{"name":"reduced rate of mitochondrial transport","type":"exact"}],"termid":"FYPO:0000497"}


id: PBO:0089805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal protein Pex11 paralog","termid":"PBO:0089805"}


id: PBO:0080348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 112 pseudogene","termid":"PBO:0080348"}


id: PBO:0028027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis_II","termid":"PBO:0028027"}


id: PBO:0034474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034474"}


id: GO:0103077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-glucoside + UDP-L-rhamnose = quercetin-3-O-glucoside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-glucoside 7-O-rhamnosyltransferase activity (obsolete GO:0103077)","termid":"GO:0103077"}


id: GO:0007566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of the blastocyst to the uterine lining.","definition_xrefs":["PMID:10882512","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo implantation","synonyms":[{"name":"blastocyst implantation","type":"exact"}],"termid":"GO:0007566"}


id: PBO:0030715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glucosyltransferase_activity","termid":"PBO:0030715"}


id: PBO:0041075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRINP3 divergent transcript","termid":"PBO:0041075"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: MONDO:1010623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"situs inversus, non-human animal","termid":"MONDO:1010068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, horse","secondary_identifiers":["OMIA:001102-9796"],"termid":"MONDO:1010623","xrefs":{"Monarch":{"xref_id":"1010623"}}}


id: PBO:0080638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR86 antisense RNA 1","termid":"PBO:0080638"}


id: PBO:0004960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 7","termid":"PBO:0004960"}


id: FYPO:0006668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during G0 phase in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear morphology during G0","synonyms":[{"name":"normal nuclear morphology during cell quiescence","type":"exact"},{"name":"normal nuclear morphology during quiescence","type":"exact"}],"termid":"FYPO:0006668"}


id: PBO:0027286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_UV","termid":"PBO:0027286"}


id: PBO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member C","termid":"PBO:0047070"}


id: GO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which the kinetochore microtubules shorten as chromosomes move toward the spindle poles as part of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic anaphase","termid":"GO:0000090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000087"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000090"}],"interesting_parent_ids":["GO:0000087","GO:0000090","GO:0008150"],"is_obsolete":false,"name":"mitotic anaphase A","termid":"GO:0000091"}


id: PBO:0066127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 6","termid":"PBO:0066127"}


id: GO:0140354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipid import into cell","synonyms":[{"name":"lipid uptake","type":"broad"}],"termid":"GO:0140354"}


id: PBO:0045180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 peudogene 2","termid":"PBO:0045180"}


id: PBO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med1","termid":"PBO:0018224"}


id: MONDO:0020795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silver-Russell syndrome 5","secondary_identifiers":["GARD:18465","MEDGEN:1713787","OMIM:618908","UMLS:C5394456"],"synonyms":[{"name":"SILVER-RUSSELL SYNDROME 5","type":"exact"},{"name":"SRS5","type":"exact"},{"name":"Silver-Russell syndrome 5","type":"exact"}],"termid":"MONDO:0020795","xrefs":{"Monarch":{"xref_id":"0020795"}}}


id: PBO:0047859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p31)","termid":"PBO:0047859"}


id: PBO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 9","termid":"PBO:0071814"}


id: PBO:0068036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 341","termid":"PBO:0068036"}


id: PBO:0042278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 homolog, vacuolar protein trafficking and biogenesis associated","termid":"PBO:0042278"}


id: GO:0140002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 trimethylated at lysine 4.","definition_xrefs":["PMID:23318260","PMID:15647753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0140566","GO:0060090"],"is_obsolete":false,"name":"histone H3K4me3 reader activity","synonyms":[{"name":"H3-K4me3 modified histone binding","type":"narrow"},{"name":"H3K4me3 modified histone binding","type":"narrow"}],"termid":"GO:0140002"}


id: PBO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SLC5A family","termid":"PBO:0011471"}


id: GO:0035426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between the extracellular matrix and a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-cell signaling","synonyms":[{"name":"cell-extracellular matrix signalling","type":"exact"},{"name":"extracellular matrix-cell signalling","type":"exact"}],"termid":"GO:0035426"}


id: GO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["GOC:tb","GOC:jh","PMID:12810699","PMID:15923184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"}


id: PATO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Handedness where the organism exhibits no overall dominance in the use of right or left hand or foot in the performance of tasks that require one hand or foot or a dominant hand or foot.","definition_xrefs":["birnlex:2042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"handedness","termid":"PATO:0002201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ambidextrous handedness","termid":"PATO:0002204"}


id: MONDO:0009566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfanoid habitus B intellectual deficit, autosomal recessive is a very rare multiple congenital anomalies syndrome described in four sibs and characterized by intellectual deficit, flat face and some skeletelal features of Marfan syndrome such as tall stature, dolichostenomelia, arm span larger than height, arachnodactyly of hands and feet, little subcutaneous fat, muscle hypotonia and intellectual deficit.","definition_xrefs":["Orphanet:2463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus-autosomal recessive intellectual disability syndrome","secondary_identifiers":["OMIM:248770","MESH:C565410","MEDGEN:343326","GARD:3388","UMLS:C1855347"],"synonyms":[{"name":"MARFANOID intellectual disability syndrome, autosomal","type":"related"},{"name":"MARFANOID mental retardation syndrome, autosomal","type":"related"},{"name":"Marfanoid intellectual disability syndrome autosomal","type":"related"},{"name":"Marfanoid mental retardation syndrome autosomal","type":"related"}],"termid":"MONDO:0009566","xrefs":{"Monarch":{"xref_id":"0009566"}}}


id: GO:0019283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"he chemical reactions and pathways resulting in the formation of L-methionine from L-homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.","definition_xrefs":["GOC:go_curators","MetaCyc:PWY-702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"'de novo' L-methionine biosynthetic process","termid":"GO:0071266"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine","synonyms":[{"name":"L-methionine formation from O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from O-phospho-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0019283"}


id: FYPO:0002584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is lower than normal. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature tRNA level during vegetative growth","termid":"FYPO:0002583"},{"relation_name":"is_a","term_name":"decreased mitochondrial RNA level","termid":"FYPO:0003423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature mitochondrial tRNA level","synonyms":[{"name":"decreased mature mitochondrial tRNA accumulation","type":"related"},{"name":"decreased mature mitochondrial tRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature mitochondrial tRNA level during vegetative growth","type":"exact"},{"name":"decreased mature mitochondrial tRNA transcript level","type":"exact"},{"name":"decreased mature mitochondrial transfer RNA level","type":"exact"},{"name":"decreased mitochondrial tRNA level","type":"broad"},{"name":"reduced mitochondrial tRNA level","type":"exact"}],"termid":"FYPO:0002584"}


id: GO:0051326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase during M phase of mitosis and meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telophase","secondary_identifiers":["Wikipedia:Telophase"],"termid":"GO:0051326"}


id: PBO:0043993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 divergent transcript","termid":"PBO:0043993"}


id: PBO:0058482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5589","termid":"PBO:0058482"}


id: PBO:0059158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase domain containing 2","termid":"PBO:0059158"}


id: PBO:0055803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 5","termid":"PBO:0055803"}


id: GO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell anergy","synonyms":[{"name":"activation of B cell anergy","type":"narrow"},{"name":"positive regulation of B lymphocyte anergy","type":"exact"},{"name":"positive regulation of B-cell anergy","type":"exact"},{"name":"positive regulation of B-lymphocyte anergy","type":"exact"},{"name":"stimulation of B cell anergy","type":"narrow"},{"name":"up regulation of B cell anergy","type":"exact"},{"name":"up-regulation of B cell anergy","type":"exact"},{"name":"upregulation of B cell anergy","type":"exact"}],"termid":"GO:0002672"}


id: MONDO:0016135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary neurologic disease with peripheral neuropathy (obsolete MONDO:0016135)","secondary_identifiers":["Orphanet:207025"],"termid":"MONDO:0016135","xrefs":{"Monarch":{"xref_id":"0016135"}}}


id: PBO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 24","termid":"PBO:0072093"}


id: GO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that increases the rate or extent of floral organ abscission.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060864)","termid":"GO:0060864"}


id: PBO:0068917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 160, pseudogene","termid":"PBO:0068917"}


id: PBO:0078495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon GAT) 1-2","termid":"PBO:0078495"}


id: PBO:0080633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 1","termid":"PBO:0080633"}


id: PBO:0046455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 3","termid":"PBO:0046455"}


id: SO:1001286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory signal, downstream sequence important for recoding that contains repetitive elements.","definition_xrefs":["PMID:12519954","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_repeat_recoding_signal","synonyms":[{"name":"three prime repeat recoding signal","type":"exact"}],"termid":"SO:1001286"}


id: MONDO:0024479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelial neoplasm that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"epithelial tumor of colon","synonyms":[{"name":"colon epithelial neoplasm","type":"exact"}],"termid":"MONDO:0024479","xrefs":{"Monarch":{"xref_id":"0024479"}}}


id: MONDO:0005233
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A group of at least three distinct histological types of lung cancer, including non-small cell squamous cell carcinoma, adenocarcinoma, and large cell carcinoma. Non-small cell lung carcinomas have a poor response to conventional chemotherapy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-small cell lung carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:NSCLC","DOID:3908","UMLS:C0007131","NCIT:C2926","Orphanet:488201","MESH:D002289","HP:0030358","SCTID:254637007","EFO:0003060","MEDGEN:40104"],"synonyms":[{"name":"NSCLC","type":"exact"},{"name":"NSCLC - non-small cell lung cancer","type":"exact"},{"name":"non-small cell cancer of lung","type":"exact"},{"name":"non-small cell cancer of the lung","type":"exact"},{"name":"non-small cell carcinoma of lung","type":"exact"},{"name":"non-small cell carcinoma of the lung","type":"exact"},{"name":"non-small cell lung cancer","type":"exact"},{"name":"non-small cell lung carcinoma","type":"exact"},{"name":"non-small cell lung carcinoma (disease)","type":"exact"}],"termid":"MONDO:0005233","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005233"}}}


id: GO:0004311
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99924,109795],"is_not":false,"summary":null,"term":"GO:0004311"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + isopentenyl diphosphate = (2E,6E,10E)-geranylgeranyl diphosphate + diphosphate.","definition_xrefs":["RHEA:17653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"geranylgeranyl diphosphate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FARNESYLTRANSTRANSFERASE-RXN","KEGG_REACTION:R02061","EC:2.5.1.29"],"synonyms":[{"name":"farnesyltranstransferase activity","type":"exact"},{"name":"geranylgeranyl pyrophosphate synthase activity","type":"exact"},{"name":"geranylgeranyl pyrophosphate synthetase activity","type":"exact"},{"name":"geranylgeranyl-PP synthetase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate synthase activity","type":"exact"},{"name":"trans,trans-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase activity","type":"related"}],"termid":"GO:0004311","terms_by_termid":{"GO:0004311":null}}


id: MONDO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disuse amblyopia","secondary_identifiers":["SCTID:193638002","ICD9:368.02","UMLS:C0152189","MEDGEN:508918","DOID:10378"],"synonyms":[{"name":"deprivation amblyopia","type":"exact"}],"termid":"MONDO:0001022","xrefs":{"Monarch":{"xref_id":"0001022"}}}


id: PBO:0027672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore_with_abnormal_shape","termid":"PBO:0027672"}


id: MONDO:1010352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia, isolated, with coloboma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"},{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma, non-human animal","secondary_identifiers":["OMIA:002151"],"termid":"MONDO:1010352","xrefs":{"Monarch":{"xref_id":"1010352"}}}


id: PBO:0038520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2 pseudogene 2","termid":"PBO:0038520"}


id: GO:0042712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Male behaviors associated with the care and rearing offspring.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paternal behavior","synonyms":[{"name":"paternal behaviour","type":"exact"}],"termid":"GO:0042712"}


id: MONDO:0018247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CADDS is a rare, genetic, neurometabolic disease characterized by severe intrauterine growth retardation, failure to thrive, profound neonatal hypotonia, severe global development delay, elevated very long chain fatty acids in plasma, and neonatal cholestasis leading to hepatic failure and death. Other features include ocular abnormalities (e.g. blindness and cataracts), sensorineural deafness, seizures, and abnormal brain morphology (notably delayed CNS myelination and ventriculomegaly).","definition_xrefs":["Orphanet:369942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"peroxisomal disease","termid":"MONDO:0019053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"CADDS","secondary_identifiers":["GARD:12472"],"synonyms":[{"name":"CADDS","type":"exact"},{"name":"Zellweger-like contiguous gene deletion syndrome","type":"exact"},{"name":"contiguous ABCD1 DXS1357E deletion syndrome","type":"exact"}],"termid":"MONDO:0018247","xrefs":{"Monarch":{"xref_id":"0018247"}}}


id: MONDO:0012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hunter-Macdonald syndrome","secondary_identifiers":["OMIM:611962","MEDGEN:383181","MESH:C567445","UMLS:C2677745"],"synonyms":[{"name":"Hunter-Macdonald syndrome","type":"exact"}],"termid":"MONDO:0012773","xrefs":{"Monarch":{"xref_id":"0012773"}}}


id: FYPO:0004368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an arsenic-containing substance.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on arsenic","synonyms":[{"name":"normal cell population growth in presence of arsenic","type":"exact"},{"name":"normal cell population growth on arsenic","type":"exact"},{"name":"normal cellular response to arsenic","type":"related"},{"name":"normal growth on arsenic molecular entity","type":"exact"},{"name":"normal growth on arsenic-containing substance","type":"exact"},{"name":"normal vegetative cell population growth on arsenic","type":"exact"}],"termid":"FYPO:0004368"}


id: PBO:0048141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 5","termid":"PBO:0048141"}


id: PBO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 3","termid":"PBO:0043067"}


id: PBO:0079474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 2","termid":"PBO:0079474"}


id: PBO:0062381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 4","termid":"PBO:0062381"}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: PBO:0003626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucan synthesis-associated protein (predicted)","termid":"PBO:0003626"}


id: GO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0000430"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"positive regulation of transcription by glucose","termid":"GO:0046016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"}],"termid":"GO:0000432"}


id: MONDO:1011527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic lipidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic lipidosis, non-human animal","termid":"MONDO:1011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lipidosis, domestic cat","secondary_identifiers":["OMIA:000548-9685","OMIA:000605-9685"],"termid":"MONDO:1011527","xrefs":{"Monarch":{"xref_id":"1011527"}}}


id: MONDO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from skeletal muscle.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle neoplasm","termid":"MONDO:0002848"},{"relation_name":"is_a","term_name":"muscle cancer","termid":"MONDO:0005864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skeletal muscle cancer","secondary_identifiers":["MEDGEN:233669","NCIT:C6516","DOID:4043","UMLS:C1334619"],"synonyms":[{"name":"cancer of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of skeletal muscle","type":"exact"},{"name":"malignant neoplasm of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of the skeletal muscle","type":"exact"},{"name":"malignant skeletal muscle neoplasm","type":"exact"},{"name":"malignant skeletal muscle tissue neoplasm","type":"exact"},{"name":"malignant skeletal muscle tumor","type":"exact"},{"name":"malignant skeletal muscle tumour","type":"exact"},{"name":"malignant tumor of skeletal muscle","type":"exact"},{"name":"malignant tumor of the skeletal muscle","type":"exact"},{"name":"malignant tumour of skeletal muscle","type":"exact"},{"name":"malignant tumour of the skeletal muscle","type":"exact"},{"name":"skeletal muscle tissue cancer","type":"exact"}],"termid":"MONDO:0002847","xrefs":{"Monarch":{"xref_id":"0002847"}}}


id: GO:0034212
data:
  {"annotated_genes":["SJAG_01826","SJAG_04131","SJAG_02990","SJAG_04791","SJAG_03900","SJAG_02165","SJAG_04631","SJAG_02773","SJAG_02726","SJAG_01204","SJAG_00676","SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[74439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[91096,91752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[91753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[99292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[72936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[91754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[99293,74442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[88770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[88771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[88772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[115650,103898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[77711,74441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[104311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[118292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[89738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008999"},{"annotations":[77712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"}]},"cv_name":"molecular_function","definition":"Catalysis of the acetylation of an amino acid residue of a peptide or protein, according to the reaction: acetyl-CoA + peptide = CoA + N-acetylpeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_01826":null,"SJAG_02165":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_03900":null,"SJAG_04131":null,"SJAG_04631":null,"SJAG_04791":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3371554","Reactome:R-HSA-9760081"],"synonyms":[{"name":"RHEA:45948","type":"broad"},{"name":"peptide N-acetyltransferase activity","type":"exact"}],"termid":"GO:0034212","terms_by_termid":{"GO:0004402":null,"GO:0004596":null,"GO:0008999":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0061733":null,"GO:0120518":null,"GO:1990189":null,"GO:1990190":null}}


id: MONDO:0014537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the DCDC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 19","secondary_identifiers":["MEDGEN:863979","GARD:18081","UMLS:C4015542","DOID:0111126","OMIM:616217"],"synonyms":[{"name":"DCDC2 nephronophthisis (disease)","type":"exact"},{"name":"NPHP19","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in DCDC2","type":"exact"},{"name":"nephronophthisis 19","type":"exact"},{"name":"nephronophthisis type 19","type":"exact"}],"termid":"MONDO:0014537","xrefs":{"Monarch":{"xref_id":"0014537"}}}


id: PBO:0072623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B","termid":"PBO:0072623"}


id: GO:0097628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a distal tip cell.","definition_xrefs":["PMID:24968003","CL:0000661","GOC:mm2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tip cell migration","termid":"GO:0097628"}


id: FYPO:0004474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic cell cycle DNA replication checkpoint is normal (i.e. indistinguishable from wild type). The mitotic DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"normal DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"normal mitotic DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0004474"}


id: SO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence used in experiment.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomaterial_region","termid":"SO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reagent","termid":"SO:0000695"}


id: GO:1901791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:yaf","UniPathway:UPA00836","GOC:TermGenie","MetaCyc:HCAMHPDEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","termid":"GO:1901790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate catabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate breakdown","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate catabolism","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate degradation","type":"exact"}],"termid":"GO:1901791"}


id: FYPO:0008277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate (1,5-IP8) measured in a cell is higher than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular myo-inositol level","termid":"FYPO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 1,5-IP8 level","termid":"FYPO:0008277"}


id: MONDO:0007445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatopathia pigmentosa reticularis","secondary_identifiers":["GARD:8550","Orphanet:86920","MEDGEN:98037","UMLS:C0406778","MESH:C535374","DOID:0111342","OMIM:125595","SCTID:239088003"],"synonyms":[{"name":"DPR","type":"related"},{"name":"dermatopathia pigmentosa reticularis","type":"exact"}],"termid":"MONDO:0007445","xrefs":{"Monarch":{"xref_id":"0007445"}}}


id: PBO:0004279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type","termid":"PBO:0004279"}


id: GO:1903517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single strand break repair.","definition_xrefs":["GOC:rl","PMID:17395247","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"negatively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"negative regulation of single strand break repair","synonyms":[{"name":"down regulation of single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair","type":"narrow"}],"termid":"GO:1903517"}


id: MONDO:0007771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial progressive hyperpigmentation","termid":"MONDO:0013648"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hyperpigmentation with or without hypopigmentation, familial progressive","secondary_identifiers":["MEDGEN:333550","DOID:0111373","GARD:18073","OMIM:145250","UMLS:C1840392"],"synonyms":[{"name":"FPHH","type":"related"},{"name":"hyperpigmentation with or without hypopigmentation","type":"exact"},{"name":"hyperpigmentation with or without hypopigmentation, familial progressive","type":"exact"},{"name":"hyperpigmentation, familial progressive, 2","type":"related"},{"name":"hyperpigmentation, familial progressive, 2, formerly","type":"related"},{"name":"macules, hereditary congenital hypopigmented and hyperpigmented","type":"exact"},{"name":"melanosis universalis hereditaria","type":"related"},{"name":"melanosis, universal","type":"exact"}],"termid":"MONDO:0007771","xrefs":{"Monarch":{"xref_id":"0007771"}}}


id: PBO:0050392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 16","termid":"PBO:0050392"}


id: PBO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 126","termid":"PBO:0044838"}


id: PBO:0036390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human LCHN ortholog","termid":"PBO:0036390"}


id: MONDO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endocarditis (disease) caused by infection with Fungi.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infective endocarditis","termid":"MONDO:0000565"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mycotic endocarditis","secondary_identifiers":["SCTID:86348002","UMLS:C0276648","MEDGEN:547460"],"synonyms":[{"name":"Fungi caused endocarditis (disease)","type":"exact"},{"name":"Fungi endocarditis (disease)","type":"exact"},{"name":"fungal endocarditis","type":"related"},{"name":"mycotic endocarditis","type":"exact"}],"termid":"MONDO:0042433","xrefs":{"Monarch":{"xref_id":"0042433"}}}


id: GO:0033723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoroacetaldehyde + NAD+ + H2O = fluoroacetate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fluoroacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:16677"],"synonyms":[{"name":"fluoroacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033723"}


id: PR:O74548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylornithine aminotransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.09c","synonyms":[{"name":"ACOAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arg1","type":"exact"}],"termid":"PR:O74548"}


id: GO:0018812
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxy-fatty acyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["RHEA:33767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-CoA hydratase activity","termid":"GO:0004300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-5676637","EC:4.2.1.74","Reactome:R-HSA-2066780","Reactome:R-HSA-2066778","Reactome:R-HSA-390252","Reactome:R-HSA-389986","Reactome:R-HSA-6809263","Reactome:R-HSA-8957389"],"termid":"GO:0018812","terms_by_termid":{"GO:0102158":null}}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: GO:0102772
data:
  {"annotated_genes":["SJAG_05311","SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92148,112848],"is_not":false,"summary":null,"term":"GO:0102772"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a phytoceramide + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.5","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingolipid C4-monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14250","RHEA:55808"],"synonyms":[{"name":"sphingolipid long-chain base 4-hydroxylase activity","type":"related"}],"termid":"GO:0102772","terms_by_termid":{"GO:0102772":null}}


id: PBO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit mu 2","termid":"PBO:0039667"}


id: PBO:0053971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1282","termid":"PBO:0053971"}


id: PR:O74537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC74.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C74.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.04","synonyms":[{"name":"Spom972h-SPCC74.04","type":"exact"}],"termid":"PR:O74537"}


id: GO:0048735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a haltere are generated and organized.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"haltere disc morphogenesis","termid":"GO:0007481"},{"relation_name":"part_of","term_name":"haltere development","termid":"GO:0007482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere morphogenesis","termid":"GO:0048735"}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: PBO:0082370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) iron-sensing transcription factor; senses high-iron conditions via two Fe/S clusters bound to its activator domain; involved in diauxic shift; YAP5 has a paralog, YAP7, that arose from the whole genome duplication","termid":"PBO:0082370"}


id: MONDO:0010092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Filippi syndrome is characterized by microcephaly, cutaneous syndactyly of the fingers and toes, intellectual deficit, growth retardation and a characteristic facies (high and broad nasal bridge, thin alae nasi, micrognathia and a high frontal hairline). So far, less than 25 cases have been reported. Cryptorchidism, polydactyly, and teeth and hair anomalies may also be present. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:3255"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Filippi syndrome","secondary_identifiers":["GARD:62","SCTID:720954000","icd11.foundation:1989471300","MESH:C538152","UMLS:C0795940","MEDGEN:163197","OMIM:272440","NORD:1149","DOID:0112194"],"synonyms":[{"name":"FILIPPI syndrome","type":"related"},{"name":"FLPIS","type":"related"},{"name":"Filippi syndrome","type":"exact"},{"name":"Scott craniodigital syndrome with intellectual disability","type":"related"},{"name":"Scott craniodigital syndrome with mental retardation","type":"related"},{"name":"syndactyly type I with microcephaly and intellectual disability","type":"related"},{"name":"syndactyly type I with microcephaly and mental retardation","type":"related"},{"name":"syndactyly, type I, with microcephaly and intellectual disability","type":"related"},{"name":"syndactyly, type I, with microcephaly and mental retardation","type":"related"},{"name":"type 1 syndactyly-microcephaly-intellectual disability syndrome","type":"exact"},{"name":"unusual facial appearance, microcephaly, growth and intellectual disability and syndactyly","type":"related"},{"name":"unusual facial appearance, microcephaly, growth and mental retardation and syndactyly","type":"related"}],"termid":"MONDO:0010092","xrefs":{"Monarch":{"xref_id":"0010092"}}}


id: PBO:0071100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 102","termid":"PBO:0071100"}


id: GO:0045647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"negatively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte differentiation","synonyms":[{"name":"down regulation of erythrocyte differentiation","type":"exact"},{"name":"down-regulation of erythrocyte differentiation","type":"exact"},{"name":"downregulation of erythrocyte differentiation","type":"exact"},{"name":"inhibition of erythrocyte differentiation","type":"narrow"},{"name":"negative regulation of RBC differentiation","type":"exact"},{"name":"negative regulation of red blood cell differentiation","type":"exact"}],"termid":"GO:0045647"}


id: SO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This is used for non-spliced EST clusters that have polyA features. This category has been specifically created for the ENCODE project to highlight regions that could indicate the presence of protein coding genes that require experimental validation, either by 5' RACE or RT-PCR to extend the transcripts, or by confirming expression of the putatively-encoded peptide with specific antibodies.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"predicted_transcript","termid":"SO:0002138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconfirmed_transcript","synonyms":[{"name":"TEC","type":"exact"},{"name":"to_be_experimentally_confirmed_transcript","type":"exact"}],"termid":"SO:0002139"}


id: MONDO:0010380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, ataxia, short stature, and intellectual disability","secondary_identifiers":["MEDGEN:375579","OMIM:300619","UMLS:C1845094","MESH:C535345"],"synonyms":[{"name":"Casm syndrome","type":"related"},{"name":"cataract, ataxia, short stature, and intellectual disability","type":"exact"},{"name":"cataract, ataxia, short stature, and mental retardation","type":"exact"},{"name":"cataracts, ataxia, short stature, and intellectual disability","type":"related"},{"name":"cataracts, ataxia, short stature, and mental retardation","type":"related"}],"termid":"MONDO:0010380","xrefs":{"Monarch":{"xref_id":"0010380"}}}


id: SO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -60 and -45 relative to the TSS. Consensus sequence is MKSYGGCARCGSYSS. Tends to co-occur with DMv3 (SO:0001160). Tends to not occur with DPE motif (SO:0000015) or MTE (SO:0001162).","definition_xrefs":["PMID:12537576:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv2_motif","synonyms":[{"name":"DMv2","type":"exact"},{"name":"DMv2 motif","type":"exact"},{"name":"MKSYGGCARCGSYSS","type":"narrow"},{"name":"directional motif v2","type":"exact"},{"name":"promoter motif 8","type":"exact"}],"termid":"SO:0001161"}


id: PBO:0055343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2771","termid":"PBO:0055343"}


id: GO:0036496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the dephosphorylation of eIF2 alpha.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"},{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha dephosphorylation","termid":"GO:0036496"}


id: GO:0045936
data:
  {"annotated_genes":["SJAG_02380","SJAG_04422","SJAG_01906","SJAG_05314","SJAG_03170","SJAG_00685","SJAG_00053","SJAG_01187","SJAG_03940"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104695,90750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[73410,76379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[115782,111680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[118305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[110038,113054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"negatively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00685":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of phosphate metabolic process","type":"exact"},{"name":"down-regulation of phosphate metabolic process","type":"exact"},{"name":"downregulation of phosphate metabolic process","type":"exact"},{"name":"inhibition of phosphate metabolic process","type":"narrow"},{"name":"negative regulation of phosphate metabolism","type":"exact"}],"termid":"GO:0045936","terms_by_termid":{"GO:0045820":null,"GO:0071072":null,"GO:1902647":null,"GO:1905707":null,"GO:2001211":null}}


id: PBO:0084055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP); contains Rho1p-specific GAP activity, interacting with activated forms of Rho1p; functions along with Sac7p as a negative regulator of the Pkc1p-mediated cell wall integrity signaling pathway; negative regulator of cell wall 1,3-beta-glucan biosynthesis; required for efficient cell fusion; contains a RhoGAP domain and three Lin-11-Isl1-Mec-3 (LIM) domains","termid":"PBO:0084055"}


id: GO:0030697
data:
  {"annotated_genes":["SJAG_04736"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67499],"is_not":false,"summary":null,"term":"GO:0030697"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + uridine54 in tRNA = 5-methyluridine54 in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:42712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016741","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["EC:2.1.1.35","MetaCyc:TRNA-URACIL-5--METHYLTRANSFERASE-RXN","GO:0009021"],"synonyms":[{"name":"M5U-methyltransferase activity","type":"related"},{"name":"RUMT","type":"broad"},{"name":"RUMT activity","type":"related"},{"name":"S-adenosyl methionine-dependent tRNA (m5U54) methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:tRNA (uracil-5-)-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity","type":"exact"},{"name":"ribothymidyl synthase activity","type":"broad"},{"name":"tRNA (uracil(54)-C(5))-methyltransferase activity, S-adenosyl methionine-dependent","type":"exact"},{"name":"tRNA (uracil-5-)-methyltransferase activity","type":"broad"},{"name":"tRNA uracil 5-methyltransferase activity","type":"related"},{"name":"tRNA:m(5)U54-methyltransferase activity","type":"related"},{"name":"tRNA:m5U54-methyltransferase activity","type":"related"},{"name":"transfer RNA uracil 5-methyltransferase activity","type":"related"},{"name":"transfer RNA uracil methylase activity","type":"related"}],"termid":"GO:0030697","terms_by_termid":{"GO:0030697":null}}


id: PBO:0117107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX2 antisense RNA 2","termid":"PBO:0117107"}


id: PBO:0038325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immersed_in","termid":"PBO:0038325"}


id: GO:0071529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited into the initial acellular cementum.","definition_xrefs":["PMID:17043865","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cementum mineralization","synonyms":[{"name":"cementum formation","type":"related"}],"termid":"GO:0071529"}


id: GO:0004357
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77685],"is_not":false,"summary":null,"term":"GO:0004357"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + L-glutamate + ATP = L-gamma-glutamyl-L-cysteine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.2","RHEA:13285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate-cysteine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-174367","Reactome:R-HSA-5602892","KEGG_REACTION:R00894","MetaCyc:GLUTCYSLIG-RXN"],"synonyms":[{"name":"L-glutamate:L-cysteine gamma-ligase (ADP-forming) activity","type":"related"},{"name":"gamma-glutamyl-L-cysteine synthetase activity","type":"related"},{"name":"gamma-glutamylcysteine synthetase activity","type":"related"},{"name":"gamma-glutamylcysteinyl synthetase activity","type":"related"}],"termid":"GO:0004357","terms_by_termid":{"GO:0004357":null}}


id: PBO:0078172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-3","termid":"PBO:0078172"}


id: GO:0102878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate = (+)-alpha-barbatene + diphosphate.","definition_xrefs":["RHEA:29499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-alpha-barbatene synthase activity","secondary_identifiers":["EC:4.2.3.69","MetaCyc:RXN-8417"],"termid":"GO:0102878"}


id: PBO:0046133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5","termid":"PBO:0046133"}


id: PBO:0076241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2 pseudogene 2","termid":"PBO:0076241"}


id: GO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitter receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor metabolic process (obsolete GO:0045213)","synonyms":[{"name":"neurotransmitter receptor metabolism","type":"exact"}],"termid":"GO:0045213"}


id: PBO:0056530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA-acyl carrier protein transacylase","termid":"PBO:0056530"}


id: PBO:0057691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1281","termid":"PBO:0057691"}


id: FYPO:0006929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to silver nanoparticles. Cells stop growing (and may die) at a concentration of silver nanoparticles that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:29294138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to silver nanoparticles","synonyms":[{"name":"hypersensitive to silver nanoparticles","type":"exact"},{"name":"sensitive to AgNP","type":"exact"},{"name":"sensitive to silver nanoparticles during mitotic cell cycle","type":"related"},{"name":"sensitive to silver nanoparticles during vegetative growth","type":"exact"}],"termid":"FYPO:0006929"}


id: GO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume","synonyms":[{"name":"diuresis","type":"broad"},{"name":"elevation of urinary volume","type":"exact"},{"name":"increase in urine flow","type":"exact"}],"termid":"GO:0035810"}


id: MONDO:0011468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary motor and sensory neuropathy, Okinawa type is a rare, genetic, axonal hereditary motor and sensory neuropathy characterized by the adult-onset of slowly progressive, symmetric, proximal dominant muscle weakness and atrophy, painful muscle cramps, fasciculations and distal sensory impairment, mostly (but not exclusively) in individuals (and their descendents) from the Okinawa region in Japan. Absent deep tendon reflexes, elevated creatine kinase levels and autosomal dominant inheritance are also characteristic.","definition_xrefs":["Orphanet:90117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy, Okinawa type","secondary_identifiers":["GARD:10131","MEDGEN:346886","MESH:C535717","OMIM:604484","UMLS:C1858338"],"synonyms":[{"name":"HMSNO","type":"related"},{"name":"HMSNP","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type, formerly","type":"related"},{"name":"neuropathy, hereditary motor and sensory, Okinawa type","type":"related"}],"termid":"MONDO:0011468","xrefs":{"Monarch":{"xref_id":"0011468"}}}


id: PBO:0073480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 1","termid":"PBO:0073480"}


id: GO:1902435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male mating behavior.","definition_xrefs":["PMID:24089208","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male mating behavior","termid":"GO:1902435"}


id: GO:2001113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"negatively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"negative regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001113"}


id: PBO:0026885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026885"}


id: MONDO:0700132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"neurocristopathy, non-human animal","termid":"MONDO:1011337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, non-human animal","secondary_identifiers":["OMIA:002231"],"termid":"MONDO:0700132","xrefs":{"Monarch":{"xref_id":"0700132"}}}


id: PBO:0049842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 5A","termid":"PBO:0049842"}


id: GO:0140510
data:
  {"annotated_genes":["SJAG_04284","SJAG_01745","SJAG_03729","SJAG_01584","SJAG_00680","SJAG_04148","SJAG_04578","SJAG_03200","SJAG_01374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110768,110734,91281,116712,96453,90463,91670,116339],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140599"},{"annotations":[94174],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140511"}]},"cv_name":"cellular_component","definition":"A narrow constricted region of the nucleus that forms around the anaphase spindle during closed mitosis, and connects the main portions of the newly forming daughter nuclei.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear bridge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear bridge","type":"broad"}],"termid":"GO:0140510","terms_by_termid":{"GO:0140511":null,"GO:0140599":null}}


id: MONDO:0012802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculoauricular syndrome, Schorderet type is a rare, genetic developmental defect during embryogenesis characterized by various ophthalmic anomalies (including congenital microphthalmia, microcornea, cataract, anterior segment dysgenesis, ocular coloboma and early onset rod-cone dystrophy), and abnormal external ears (low-set pinna with crumpled helix, narrow intertragic incisure, abnormal bridge connecting the crus of the helix and the anthelix, narrow external acoustic meatus, and lobule aplasia).","definition_xrefs":["Orphanet:157962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"oculoauricular syndrome","secondary_identifiers":["OMIM:612109","DOID:0060482","MESH:C567416","UMLS:C2677500","GARD:16988","MEDGEN:393758"],"synonyms":[{"name":"OCACS","type":"related"},{"name":"Schorderet-Munier-Franceschetti syndrome","type":"related"},{"name":"microphthalmia, microcornea, anterior segment dysgenesis, cataract, ocular coloboma, retinal pigment epithelium abnormalities, Rod-cone dystrophy, and anomalies of the external Ear","type":"related"},{"name":"oculoauricular syndrome","type":"exact"},{"name":"oculoauricular syndrome, Schorderet type","type":"related"}],"termid":"MONDO:0012802","xrefs":{"Monarch":{"xref_id":"0012802"}}}


id: PBO:0079072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 6-1","termid":"PBO:0079072"}


id: GO:0098886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure of a dendritic spine.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of postsynaptic structure","termid":"GO:0099010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of dendritic spine","termid":"GO:0098886"}


id: MONDO:0010992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ayme-Gripp syndrome","secondary_identifiers":["UMLS:C1832812","OMIM:601088","DOID:0111688","MEDGEN:371416","Orphanet:477668","MESH:C563390"],"synonyms":[{"name":"AYGRP","type":"related"},{"name":"AYME-Gripp syndrome","type":"related"},{"name":"Ayme-Gripp syndrome","type":"exact"},{"name":"Aymé-Gripp syndrome","type":"related"},{"name":"cataracts, congenital, with sensorineural deafness, Down syndrome-like Facial appearance, short stature, and intellectual disability","type":"related"},{"name":"cataracts, congenital, with sensorineural deafness, Down syndrome-like Facial appearance, short stature, and mental retardation","type":"related"}],"termid":"MONDO:0010992","xrefs":{"Monarch":{"xref_id":"0010992"}}}


id: PBO:0082021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member A, cell cycle regulator pseudogene 1","termid":"PBO:0082021"}


id: FYPO:0001177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing trehalose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on trehalose carbon source","synonyms":[{"name":"decreased growth on trehalose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on trehalose carbon source","type":"exact"},{"name":"reduced cell growth on trehalose carbon source","type":"exact"},{"name":"slow cell growth on trehalose carbon source","type":"narrow"}],"termid":"FYPO:0001177"}


id: GO:2000772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular senescence.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular senescence","termid":"GO:2000772"}


id: FYPO:0000371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA modification does not occur. All RNA modification may be abolished, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished RNA modification","synonyms":[{"name":"RNA modification abolished","type":"exact"},{"name":"RNA modification abolished during vegetative growth","type":"exact"},{"name":"RNA modification: absent","type":"related"},{"name":"abolished RNA modification during mitotic cell cycle","type":"related"},{"name":"absent RNA modification","type":"exact"}],"termid":"FYPO:0000371"}


id: PBO:0084229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huge dynein-related AAA-type ATPase (midasin); forms extended pre-60S particle with the Rix1 complex; involved with interaction partners Rsa4p and Ytm1p, in the ATP-dependent remodeling of the pre-60S particle at successive maturation steps during ribosomal biogenesis; involved in the removal of biogenesis factors including GTPase Nog2p prior to nuclear export; contains a hexameric AAA-motor head domain and a long flexible tail with a MIDAS (metal ion-dependent adhesion site) domain","termid":"PBO:0084229"}


id: GO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"negative regulation of second heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0072513"}


id: MONDO:1012213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch, non-human animal","termid":"MONDO:1011644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, domestic cat","secondary_identifiers":["OMIA:000794-9685"],"termid":"MONDO:1012213","xrefs":{"Monarch":{"xref_id":"1012213"}}}


id: PBO:0078991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-1","termid":"PBO:0078991"}


id: MONDO:0020856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"bone marrow failure syndrome 4","secondary_identifiers":["OMIM:618116","UMLS:C4748257","MEDGEN:1648485"],"synonyms":[{"name":"BMFS4","type":"exact"},{"name":"BONE MARROW FAILURE SYNDROME 4","type":"exact"}],"termid":"MONDO:0020856","xrefs":{"Monarch":{"xref_id":"0020856"}}}


id: GO:0060783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein in the mesenchymal cells of the prostate that contribute to the progression of the prostate over time. This process contributes to lung development.","definition_xrefs":["PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"epithelial-mesenchymal signaling involved in prostate gland development","termid":"GO:0060738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal smoothened signaling pathway involved in prostate gland development","synonyms":[{"name":"mesenchymal hedgehog signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal hh signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal smoothened signalling pathway involved in prostate gland development","type":"exact"}],"termid":"GO:0060783"}


id: PBO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0090101"}


id: GO:0033586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-phenylalanine from other compounds, including chorismate, via the intermediate L-arogenate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine biosynthetic process","termid":"GO:0009094"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-phenylalanine biosynthetic process from chorismate via L-arogenate","secondary_identifiers":["MetaCyc:PWY-3462"],"synonyms":[{"name":"L-phenylalanine anabolism from chorismate via L-arogenate","type":"exact"},{"name":"L-phenylalanine biosynthesis from chorismate via L-arogenate","type":"exact"},{"name":"L-phenylalanine formation from chorismate via L-arogenate","type":"exact"},{"name":"L-phenylalanine synthesis from chorismate via L-arogenate","type":"exact"}],"termid":"GO:0033586"}


id: _global:temporally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally_related_to","secondary_identifiers":["RO:0002222"],"termid":"_global:temporally_related_to"}


id: PBO:0114419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIF family member 2","termid":"PBO:0114419"}


id: PBO:0071883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 21","termid":"PBO:0071883"}


id: GO:0032032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin I heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"},{"relation_name":"is_a","term_name":"myosin I heavy chain binding","termid":"GO:0032037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"myosin I tail binding","termid":"GO:0032032"}


id: GO:0070564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"activation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"positive regulation of VDR signaling pathway","type":"exact"},{"name":"positive regulation of vitamin D receptor signalling pathway","type":"exact"},{"name":"stimulation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"up regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"up-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"upregulation of vitamin D receptor signaling pathway","type":"exact"}],"termid":"GO:0070564"}


id: PBO:0060183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3B, cell surface associated","termid":"PBO:0060183"}


id: GO:0018341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-pyruvic acid 2-iminyl-L-lysine.","definition_xrefs":["PSI-MOD:00292"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine modification to peptidyl-N6-pyruvic acid 2-iminyl-L-lysine (obsolete GO:0018341)","synonyms":[{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine anabolism","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine biosynthesis","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine biosynthetic process","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine formation","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine synthesis","type":"exact"}],"termid":"GO:0018341"}


id: GO:0051559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phlobaphene metabolic process","termid":"GO:0051558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene biosynthetic process","termid":"GO:0051559"}


id: PBO:0053227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing G protein-coupled receptor 4","termid":"PBO:0053227"}


id: GO:1990722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A serine/threonine protein kinase complex involved in cell survival, apoptosis and autophagic cell death pathways. DAPK1 is activated by the dephosphorylation of a n-terminal serine and calcium-calmodulin binding.","definition_xrefs":["PMID:20103772","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DAPK1-calmodulin complex","synonyms":[{"name":"death-associated protein kinase 1 - calmodulin complex","type":"exact"}],"termid":"GO:1990722"}


id: GO:0052417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont protein (obsolete GO:0052417)","termid":"GO:0052417"}


id: MONDO:0100266
data:
  {"annotated_genes":["SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013927"},{"annotations":[86657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009959"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0019053","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX12 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX12 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX12 defect","type":"exact"}],"termid":"MONDO:0100266","terms_by_termid":{"MONDO:0009959":null,"MONDO:0013927":null},"xrefs":{"Monarch":{"xref_id":"0100266"}}}


id: PBO:0064237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 1","termid":"PBO:0064237"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: PR:O60062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met6 gene.","definition_xrefs":["UniProtKB:O60062","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.11","synonyms":[{"name":"Spom972h-met6","type":"exact"},{"name":"homoserine O-trans-acetylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60062"}


id: PBO:0033796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fidelity_of_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0033796"}


id: MONDO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy with microcephaly and mental subnormality","secondary_identifiers":["MEDGEN:1856346","OMIM:271110","MESH:C564806","UMLS:C5935682"],"synonyms":[{"name":"spinal muscular atrophy with microcephaly and mental subnormality","type":"exact"}],"termid":"MONDO:0010055","xrefs":{"Monarch":{"xref_id":"0010055"}}}


id: GO:0102208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-(all-trans-polyprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = a 2-methoxy-6-(all-trans-polyprenyl)phenol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:31411","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"2-polyprenyl-6-hydroxyphenol methylase activity","secondary_identifiers":["MetaCyc:RXN-12160","EC:2.1.1.222"],"termid":"GO:0102208"}


id: MONDO:1012325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"premature senesence, non-human animal","termid":"MONDO:1011784"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature senesence, pig","secondary_identifiers":["OMIA:001213-9823"],"termid":"MONDO:1012325","xrefs":{"Monarch":{"xref_id":"1012325"}}}


id: PBO:0050503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 3","termid":"PBO:0050503"}


id: PBO:0038866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADARB2 antisense RNA 1","termid":"PBO:0038866"}


id: MONDO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malaria resulting from infection by Plasmodium malariae.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium malariae malaria","secondary_identifiers":["NCIT:C34799","UMLS:C0024536","SCTID:27618009","ICD9:084.2","MEDGEN:44259","DOID:14324","ICD10CM:B52"],"synonyms":[{"name":"malaria by Plasmodium malariae","type":"exact"},{"name":"quartan malaria","type":"exact"}],"termid":"MONDO:0001943","xrefs":{"Monarch":{"xref_id":"0001943"}}}


id: MONDO:0007720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hernia, double inguinal","secondary_identifiers":["MESH:C563164","MEDGEN:163567","UMLS:C0860251","OMIM:142350"],"synonyms":[{"name":"hernia, double inguinal","type":"exact"}],"termid":"MONDO:0007720","xrefs":{"Monarch":{"xref_id":"0007720"}}}


id: PBO:0055620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3059","termid":"PBO:0055620"}


id: GO:0032461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"positively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein oligomerization","synonyms":[{"name":"activation of protein oligomerization","type":"narrow"},{"name":"induction of protein oligomerization","type":"related"},{"name":"stimulation of protein oligomerization","type":"narrow"},{"name":"up regulation of protein oligomerization","type":"exact"},{"name":"up-regulation of protein oligomerization","type":"exact"},{"name":"upregulation of protein oligomerization","type":"exact"}],"termid":"GO:0032461"}


id: GO:0043490
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96891],"is_not":false,"summary":null,"term":"GO:0043490"}]},"cv_name":"biological_process","definition":"The process of transferring reducing equivalents from NADH in the cytosol to the mitochondria via malate. Cytosolic aspartate aminotransferase converts aspartate to oxaloacetate, and cytosolic malate dehydrogenase uses NADH to convert oxaloacetate to malate in the cytosol; the malate-alpha-ketoglutarate carrier then transports the malate into the mitochondria where mitochondrial malate dehydrogenase uses NAD to convert malate back to oxaloacetate; the electrons on the reduced NADH are then available for use in the electron transport chain; mitochondrial aspartate aminotransferase converts oxaloacetate to aspartate, and the glutamate-aspartate carrier transports the aspartate back to the cytosol to complete the cycle.","definition_xrefs":["PMID:16368075","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH oxidation","termid":"GO:0006116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"malate-aspartate shuttle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9856872","Wikipedia:Malate-aspartate_shuttle","MetaCyc:MALATE-ASPARTATE-SHUTTLE-PWY"],"synonyms":[{"name":"malate aspartate shuttle","type":"exact"},{"name":"malate/aspartate shuttle","type":"exact"},{"name":"malate:aspartate shuttle","type":"exact"}],"termid":"GO:0043490","terms_by_termid":{"GO:0043490":null}}


id: MONDO:0009974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Hemophagocytic lymphohistiocytosis (FHL) is a rare primary immunodeficiency characterized by a macrophage activation syndrome with an onset usually occurring within a few months or less common several years after birth.","definition_xrefs":["Orphanet:540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial hemophagocytic lymphohistiocytosis type 1","secondary_identifiers":["OMIM:267700","UMLS:C4551514","MEDGEN:1642840","DOID:0110921","MedDRA:10070904","NCIT:C61276"],"synonyms":[{"name":"Erythrophagocytic lymphohistiocytosis, familial","type":"related"},{"name":"FHL1","type":"exact"},{"name":"HLH1","type":"exact"},{"name":"HPLH1","type":"exact"},{"name":"Hlh1","type":"related"},{"name":"Hplh1","type":"related"},{"name":"familial HLH","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis","type":"broad"},{"name":"familial hemophagocytic lymphohistiocytosis 1","type":"related"},{"name":"familial hemophagocytic lymphohistiocytosis type 1","type":"exact"},{"name":"hemophagocytic lymphohistiocytosis, familial","type":"related"},{"name":"hemophagocytic lymphohistiocytosis, familial, 1","type":"related"},{"name":"hemophagocytic reticulosis, familial","type":"related"},{"name":"reticulosis, familial histiocytic","type":"related"}],"termid":"MONDO:0009974","xrefs":{"Monarch":{"xref_id":"0009974"}}}


id: FYPO:0000571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of shmoo formation","synonyms":[{"name":"decreased rate of conjugation tube formation","type":"exact"},{"name":"decreased rate of mating projection assembly","type":"exact"},{"name":"decreased rate of mating projection formation","type":"exact"},{"name":"decreased rate of shmoo assembly","type":"exact"},{"name":"reduced rate of shmoo formation","type":"exact"},{"name":"shmoo formation: decreased rate","type":"related"}],"termid":"FYPO:0000571"}


id: PBO:0083600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; identified by fungal homology and RT-PCR","termid":"PBO:0083600"}


id: SO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that specifies the insertions and deletions of bases in the editing of a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"template_region","synonyms":[{"name":"information region","type":"exact"},{"name":"template region","type":"exact"}],"termid":"SO:0000978"}


id: PBO:0089021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk6","termid":"PBO:0089021"}


id: PBO:0049745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit mu","termid":"PBO:0049745"}


id: MONDO:0859314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 108","secondary_identifiers":["DOID:0070394","OMIM:620115","UMLS:C5774253","MEDGEN:1824026"],"termid":"MONDO:0859314","xrefs":{"Monarch":{"xref_id":"0859314"}}}


id: MONDO:0027416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal cone dystrophy 2 (obsolete MONDO:0027416)","secondary_identifiers":["OMIM:601251"],"synonyms":[{"name":"Cone dystrophy progressive","type":"related"},{"name":"Progressive cone degeneration","type":"related"},{"name":"RCD2","type":"related"}],"termid":"MONDO:0027416","xrefs":{"Monarch":{"xref_id":"0027416"}}}


id: MOD:00451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a propanoyl group.","definition_xrefs":["PubMed:11999733","PubMed:12175151","Unimod:58#N-term","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:00451"}


id: MONDO:0019050
data:
  {"annotated_genes":["SJAG_02297","SJAG_00235","SJAG_04217","SJAG_00839","SJAG_03929","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[85893,85894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"},{"annotations":[85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"An inherited disorder characterized by structural alterations of a globin chain within the hemoglobin molecule.","definition_xrefs":["NCIT:C3092"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00839":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_03929":null,"SJAG_04217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"inherited hemoglobinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:427306008","ICD10CM:D58.0","ICD10CM:D58.1","MESH:D006453","DOID:2860","ICD9:282.7","Orphanet:68364","GARD:18883","MedDRA:10060892"],"synonyms":[{"name":"Hemoglobinopathies / iron metabolism","type":"exact"},{"name":"hemoglobinopathies","type":"exact"},{"name":"hemoglobinopathy","type":"related"},{"name":"hereditary hemoglobinopathy","type":"exact"}],"termid":"MONDO:0019050","terms_by_termid":{"MONDO:0009605":null,"MONDO:0009606":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null},"xrefs":{"Monarch":{"xref_id":"0019050"}}}


id: PBO:0039516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 31","termid":"PBO:0039516"}


id: GO:0032651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050706","GO:0050722"],"synonyms":[{"name":"regulation of IL-1 beta production","type":"exact"},{"name":"regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032651"}


id: GO:0032672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-3 production","secondary_identifiers":["GO:0045399"],"synonyms":[{"name":"regulation of IL-3 production","type":"exact"},{"name":"regulation of interleukin-3 biosynthetic process","type":"narrow"}],"termid":"GO:0032672"}


id: GO:0033220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amide(out) = ADP + phosphate + amide(in).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amide-transporter activity (obsolete GO:0033220)","synonyms":[{"name":"ATP-dependent amide-transporter activity","type":"exact"},{"name":"amide-transporting ATPase activity","type":"exact"}],"termid":"GO:0033220"}


id: MONDO:0001475
data:
  {"annotated_genes":["SJAG_03889","SJAG_01732","SJAG_02453","SJAG_01759","SJAG_02208","SJAG_02330","SJAG_01798","SJAG_03684","SJAG_03089"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[86335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[86449,86450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[87043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[87137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[86061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[86982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A decrease in the number of neutrophils found in the blood.","definition_xrefs":["MESH:D009503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agranulocytosis","termid":"MONDO:0001609"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"neutropenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:288.0","ICD9:288.00","HP:0001875","MEDGEN:163121","DOID:1227","SCTID:303011007","UMLS:C0853697"],"synonyms":[{"name":"neutropenia","type":"exact"},{"name":"neutropenic disorder","type":"exact"}],"termid":"MONDO:0001475","terms_by_termid":{"MONDO:0010294":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0001475"}}}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:20711475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: MONDO:0019483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methotrexate-associated lymphoproliferative disorders are rare immunodeficiency-associated lymphoproliferative diseases characterized by lymphoid proliferation or lymphomas (large B-cell lymphoma, T-cell lymphoma, Hodgkin lymphoma, reactive lymphadenitis and a polymorphic post-transplant lymphoproliferative disorder) that develop in patients with different autoimmune diseases treated with methotrexate. Swelling is the predominant manifestation of the disease and regression after methotrexate withdrawal is observed in a significant proportion of patients.","definition_xrefs":["Orphanet:86904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"methotrexate-associated lymphoproliferative disorders","secondary_identifiers":["icd11.foundation:1520483526","MEDGEN:233702","NCIT:C7184","UMLS:C1334749","DOID:5821","GARD:19083"],"synonyms":[{"name":"MTX-LPD","type":"exact"},{"name":"MTX-associated lymphoproliferative disorders","type":"exact"},{"name":"methotrexate-associated lymphoproliferation","type":"exact"},{"name":"methotrexate-associated lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0019483","xrefs":{"Monarch":{"xref_id":"0019483"}}}


id: PBO:0109390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 19","termid":"PBO:0109390"}


id: PBO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 pseudogene 1","termid":"PBO:0043579"}


id: GO:0030589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of furrows in the cytoplasm between nuclei during cell cycles in embryos that contribute to the formation of the syncytial blastoderm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudocleavage involved in syncytial blastoderm formation","synonyms":[{"name":"pseudocleavage during syncytial blastoderm formation","type":"related"}],"termid":"GO:0030589"}


id: PBO:0049356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 14","termid":"PBO:0049356"}


id: MONDO:0010164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schinzel phocomelia syndrome, also called limb/pelvis hypoplasia/aplasia syndrome, is characterized by skeletal malformations affecting the ulnae, pelvic bones, fibulae and femora. As the phenotype is similar to that described in the malformation syndrome known as Al-Awadi/Raas-Rothschild syndrome, they are thought to be the same disorder.","definition_xrefs":["Orphanet:2879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"phocomelia, Schinzel type","secondary_identifiers":["UMLS:C1848651","MEDGEN:336388","OMIM:276820","MESH:C535612","GARD:9212","icd11.foundation:1732271544","SCTID:715522000","DOID:0112181"],"synonyms":[{"name":"AARRS","type":"related"},{"name":"Al Awadi Teebi Farag syndrome","type":"related"},{"name":"Al Awadi-Raas-Rothschild syndrome","type":"exact"},{"name":"Al-Awadi-Raas-Rothschild syndrome","type":"related"},{"name":"Al-Awadi/Raas-Rothschild syndrome","type":"related"},{"name":"Al-Awadi/Raas-Rothschild/Schinzel phocomelia syndrome","type":"related"},{"name":"Schinzel phocomelia syndrome","type":"related"},{"name":"Teebi Naguib Al Awadi syndrome","type":"related"},{"name":"absence of ulna and fibula with severe limb deficiency","type":"related"},{"name":"aplasia/hypoplasia of limbs and pelvis","type":"exact"},{"name":"congenital absence of ulna and fibula","type":"exact"},{"name":"limb/pelvis-hypoplasia/aplasia syndrome","type":"related"},{"name":"profound limb deficiency, thoracic dystrophy, unusual facies, and normal intelligence","type":"related"},{"name":"severe limb deficit","type":"exact"},{"name":"ulna and fibula absence of with severe limb deficiency","type":"related"},{"name":"ulna and fibula, absence of, with severe limb deficiency","type":"related"}],"termid":"MONDO:0010164","xrefs":{"Monarch":{"xref_id":"0010164"}}}


id: MONDO:0013217
data:
  {"annotated_genes":["SJAG_01366","SJAG_02894"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86646,86647],"is_not":false,"summary":null,"term":"MONDO:0013217"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS26 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01366":null,"SJAG_02894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2750080","MESH:C567649","GARD:15645","MEDGEN:412873","NCIT:C176919","OMIM:613309","DOID:0111888"],"synonyms":[{"name":"DBA10","type":"related"},{"name":"Diamond-Blackfan Anaemia type 10","type":"exact"},{"name":"Diamond-Blackfan Anemia type 10","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS26","type":"exact"},{"name":"Diamond-Blackfan anemia 10","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS26","type":"exact"},{"name":"RPS26 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS26 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0013217","terms_by_termid":{"MONDO:0013217":null},"xrefs":{"Monarch":{"xref_id":"0013217"}}}


id: PBO:0071221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 62","termid":"PBO:0071221"}


id: MONDO:1011518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen storage disease that occurs in ring-tailed coati.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, ring-tailed coati","secondary_identifiers":["OMIA:001883-9651"],"termid":"MONDO:1011518","xrefs":{"Monarch":{"xref_id":"1011518"}}}


id: PBO:0039047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL5 intronic transcript 1","termid":"PBO:0039047"}


id: MONDO:0025087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, highly contagious disease affecting swine of all ages and caused by the classical swine fever virus. It has a sudden onset with high morbidity and mortality.","definition_xrefs":["MESH:D006691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classical swine fever","synonyms":[{"name":"Hog cholera","type":"related"},{"name":"cholera, Hog","type":"related"},{"name":"swine fever","type":"related"},{"name":"swine fever, classical","type":"related"}],"termid":"MONDO:0025087","xrefs":{"Monarch":{"xref_id":"0025087"}}}


id: GO:1902033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"regulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902033"}


id: GO:0071443
data:
  {"annotated_genes":["SJAG_00585"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107248],"is_not":false,"summary":null,"term":"GO:0071443"}]},"cv_name":"molecular_function","definition":"Binding to DNA sequences encoding transfer RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tDNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071443","terms_by_termid":{"GO:0071443":null}}


id: FYPO:0000386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biofilm formation","termid":"FYPO:0000630"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished biofilm formation","synonyms":[{"name":"absent biofilm formation","type":"exact"},{"name":"biofilm formation abolished","type":"exact"},{"name":"biofilm formation: absent","type":"related"}],"termid":"FYPO:0000386"}


id: GO:0071139
data:
  {"annotated_genes":["SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071140"}]},"cv_name":"biological_process","definition":"The cleavage and rejoining of intermediates, such as Holliday junctions, formed during DNA recombination to produce two intact molecules in which genetic material has been exchanged.","definition_xrefs":["GOC:elh","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"resolution of DNA recombination intermediates","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"resolution of recombination intermediates","type":"exact"}],"termid":"GO:0071139","terms_by_termid":{"GO:0071140":null}}


id: GO:0034523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-formylsalicylic acid + O2 + H2O = 2-hydroxyisophthalic acid + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-formylsalicylate oxidase activity (obsolete GO:0034523)","termid":"GO:0034523"}


id: PBO:0065534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary thyroid carcinoma susceptibility candidate 1","termid":"PBO:0065534"}


id: PBO:0067398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 504, pseudogene","termid":"PBO:0067398"}


id: PBO:0047989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member F, pseudogene","termid":"PBO:0047989"}


id: PBO:0056001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056001"}


id: GO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infolding of the epithelial sheet into the embryo involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invagination involved in gastrulation with mouth forming second","termid":"GO:0055109"}


id: PBO:0053933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1232","termid":"PBO:0053933"}


id: PBO:0034805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex ubiquitin-protein ligase E3 subunit Nse1","termid":"PBO:0034805"}


id: MONDO:0800310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"pregnancy loss, recurrent, 4","secondary_identifiers":["MEDGEN:481067","UMLS:C3279437"],"synonyms":[{"name":"RPRGL4","type":"exact"}],"termid":"MONDO:0800310","xrefs":{"Monarch":{"xref_id":"0800310"}}}


id: MONDO:0008516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly type 5 (SD5) is a very rare congenital limb malformation characterized by postaxial syndactyly of hands and feet, associated with metacarpal and metatarsal fusion of fourth and fifth digits.","definition_xrefs":["Orphanet:93406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 5","secondary_identifiers":["MEDGEN:350010","UMLS:C1861348","MESH:C538155","OMIM:186300","icd11.foundation:283224140","DOID:0111819","SCTID:719159004","GARD:5089"],"synonyms":[{"name":"SD5","type":"exact"},{"name":"SDTY5","type":"related"},{"name":"postaxial syndactyly with metacarpal synostosis","type":"exact"},{"name":"syndactyly with associated metacarpal and metatarsal fusion","type":"related"},{"name":"syndactyly with metacarpal and metatarsal fusion","type":"related"},{"name":"syndactyly, type 5","type":"related"},{"name":"syndactyly, type V","type":"related"}],"termid":"MONDO:0008516","xrefs":{"Monarch":{"xref_id":"0008516"}}}


id: MONDO:0003320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney characterized by the predominance of the blastema component.","definition_xrefs":["NCIT:C9147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"blastema predominant kidney Wilms tumor","secondary_identifiers":["UMLS:C0279609","DOID:5182","MEDGEN:83528"],"synonyms":[{"name":"blastema predominant Wilms tumor","type":"exact"},{"name":"blastema predominant Wilms tumour","type":"exact"},{"name":"blastema predominant kidney Wilms tumor","type":"exact"},{"name":"blastema predominant kidney Wilms' tumor","type":"related"},{"name":"blastema predominant kidney Wilms' tumour","type":"related"},{"name":"blastema predominant kidney adenosarcoma","type":"exact"},{"name":"blastema predominant nephroblastoma","type":"exact"},{"name":"blastema predominant renal Wilm's tumor","type":"exact"},{"name":"blastema predominant renal Wilm's tumour","type":"exact"},{"name":"blastema predominant renal Wilms tumor","type":"exact"},{"name":"blastema predominant renal Wilms tumour","type":"exact"},{"name":"blastema predominant renal Wilms' tumor","type":"exact"},{"name":"blastema predominant renal Wilms' tumour","type":"exact"},{"name":"blastema predominant renal adenosarcoma","type":"exact"}],"termid":"MONDO:0003320","xrefs":{"Monarch":{"xref_id":"0003320"}}}


id: PBO:0061297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptides B and W receptor 2","termid":"PBO:0061297"}


id: FYPO:0009085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to lithium chloride and SDS","type":"exact"},{"name":"resistance to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and SDS in combination","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to lithium chloride and SDS","type":"exact"},{"name":"resistant to lithium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009085"}


id: PBO:0059039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 26","termid":"PBO:0059039"}


id: GO:0070019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A receptor complex that consists of two transforming growth factor beta (TGF-beta) type II receptor monomers. TGF-beta type II receptor dimers form in the presence or absence of ligand, and upon ligand binding can associate with TGF-beta type I receptor dimers.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta type II receptor homodimeric complex (obsolete GO:0070019)","synonyms":[{"name":"TGF-beta type II receptor complex","type":"exact"},{"name":"TGF-beta type II receptor dimer","type":"exact"},{"name":"TGFBR2 homodimer","type":"exact"},{"name":"transforming growth factor beta type II receptor complex","type":"exact"}],"termid":"GO:0070019"}


id: GO:0021722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"pons maturation","termid":"GO:0021586"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus maturation","synonyms":[{"name":"superior olive maturation","type":"related"}],"termid":"GO:0021722"}


id: GO:0015894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acriflavine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acriflavine is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["PubChem_Compound:6842","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transport (obsolete GO:0015894)","synonyms":[{"name":"acriflavin transport","type":"related"}],"termid":"GO:0015894"}


id: PR:Q10274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- teb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telobox protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.10","synonyms":[{"name":"Spom972h-teb1","type":"exact"},{"name":"meiotically up-regulated gene 152 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10274"}


id: MONDO:0014534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microlissencephaly in which the cause of the disease is a mutation in the KATNB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 6 with microcephaly","secondary_identifiers":["UMLS:C4015525","OMIM:616212","DOID:0112236","MEDGEN:863962"],"synonyms":[{"name":"KATNB1 Microlissencephaly","type":"exact"},{"name":"KATNB1 microlissencephaly","type":"exact"},{"name":"LIS6","type":"related"},{"name":"Microlissencephaly caused by mutation in KATNB1","type":"exact"},{"name":"lissencephaly 6 with microcephaly","type":"exact"},{"name":"lissencephaly 6, with microcephaly","type":"exact"},{"name":"microlissencephaly caused by mutation in KATNB1","type":"exact"}],"termid":"MONDO:0014534","xrefs":{"Monarch":{"xref_id":"0014534"}}}


id: MONDO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The turning outward (eversion) of the edge of the eyelid, resulting in the exposure of the palpebral conjunctiva. (Dorland, 27th ed)","definition_xrefs":["MESH:D004483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectropion","secondary_identifiers":["UMLS:C0013592","SCTID:62909004","HP:0000656","MEDGEN:4448","DOID:1570","ICD9:374.1","ICD9:374.10"],"synonyms":[{"name":"ectropion","type":"exact"},{"name":"ectropion (disease)","type":"exact"},{"name":"ectropion of eyelid","type":"exact"},{"name":"everted margin","type":"exact"}],"termid":"MONDO:0002043","xrefs":{"Monarch":{"xref_id":"0002043"}}}


id: GO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host JAK1 (Janus Kinase 1).","definition_xrefs":["PMID:16188985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of JAK1 activity","secondary_identifiers":["VZ:784","GO:0039515"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"inhibition of host JAK activity by virus","type":"narrow"},{"name":"negative regulation by virus of host JAK","type":"narrow"},{"name":"negative regulation by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"suppression by virus of host JAK1 activity","type":"narrow"},{"name":"suppression by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"viral inhibition of tyrosine phosphorylation of host STAT protein","type":"narrow"}],"termid":"GO:0039576"}


id: PBO:0069145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 396, pseudogene","termid":"PBO:0069145"}


id: MONDO:0044718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"alkaline ceramidase 3 deficiency","secondary_identifiers":["Orphanet:502444","UMLS:C4540358","OMIM:617762","GARD:17936","MEDGEN:1622324"],"synonyms":[{"name":"ACER3-related early childhood-onset progressive leukodystrophy","type":"exact"},{"name":"PLDECO","type":"related"},{"name":"leukodystrophy due to alkaline ceramidase 3 deficiency","type":"exact"},{"name":"leukodystrophy, progressive, early childhood-onset","type":"related"}],"termid":"MONDO:0044718","xrefs":{"Monarch":{"xref_id":"0044718"}}}


id: PBO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase (predicted)","termid":"PBO:0002007"}


id: GO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:mah","GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-allose metabolic process","termid":"GO:0019314"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-allose catabolic process","secondary_identifiers":["MetaCyc:PWY0-44"],"synonyms":[{"name":"D-allose breakdown","type":"exact"},{"name":"D-allose catabolism","type":"exact"},{"name":"D-allose degradation","type":"exact"}],"termid":"GO:0019316"}


id: PBO:0030730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitosis","termid":"PBO:0030730"}


id: MONDO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving gluten.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete gluten allergy (obsolete MONDO:0000606)","secondary_identifiers":["DOID:0060057"],"synonyms":[{"name":"allergy of gluten","type":"exact"},{"name":"allergy to gluten","type":"exact"},{"name":"gluten allergic disease","type":"exact"},{"name":"gluten allergic reaction","type":"exact"}],"termid":"MONDO:0000606","xrefs":{"Monarch":{"xref_id":"0000606"}}}


id: MONDO:0018798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other genetic dermis disorder (obsolete MONDO:0018798)","secondary_identifiers":["Orphanet:477808"],"termid":"MONDO:0018798","xrefs":{"Monarch":{"xref_id":"0018798"}}}


id: SO:0001372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methyluridine","secondary_identifiers":["RNAMOD:085"],"synonyms":[{"name":"3-methyluridine","type":"exact"},{"name":"m3U","type":"exact"},{"name":"three methyluridine","type":"exact"}],"termid":"SO:0001372"}


id: PBO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Seh1","termid":"PBO:0001532"}


id: GO:2000935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"positively_regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellotriose metabolic process","synonyms":[{"name":"positive regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000935"}


id: GO:2000241
data:
  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id: GO:0090207
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id: GO:0097716
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper (Cu) ions passing through the blood-brain barrier.","definition_xrefs":["GOC:sl","PMID:24614235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"copper ion transport across blood-brain barrier","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:0097716"}


id: PBO:0047851
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p22)","termid":"PBO:0047851"}


id: GO:0097476
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a spinal cord motor neuron from one site to another. A spinal cord motor neuron is a motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement.","definition_xrefs":["GOC:yaf","PMID:20711475","CL:0011001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron migration","termid":"GO:0097475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron migration","termid":"GO:0097476"}


id: GO:0035717
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 7.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 7 binding","synonyms":[{"name":"CCL7 binding","type":"exact"}],"termid":"GO:0035717"}


id: PBO:0089946
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S33","termid":"PBO:0089946"}


id: PBO:0059831
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal regulatory transcription factor 1","termid":"PBO:0059831"}


id: PR:Q02592
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 6, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal tolerance protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.09c","secondary_identifiers":["UniProtKB:Q02592"],"synonyms":[{"name":"Spom972h-ABCB6","type":"exact"}],"termid":"PR:Q02592"}


id: GO:0052018
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of RNA levels in host (obsolete GO:0052018)","synonyms":[{"name":"modulation by symbiont of host RNA levels","type":"exact"}],"termid":"GO:0052018"}


id: PR:Q10449
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug157 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 157 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.16c","synonyms":[{"name":"Spom972h-mug157","type":"exact"}],"termid":"PR:Q10449"}


id: GO:0047233
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-beta-D-galactosaminyl-1,4-(N-acetyl-alpha-neuraminyl-2,3)-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP.","definition_xrefs":["EC:2.4.1.165","MetaCyc:2.4.1.165-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"N-acetylneuraminylgalactosylglucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:13569"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminyl(alpha2->3)galactosyl(beta1->4)glucosyl beta1->4-acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047233"}


id: GO:0001550
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian cumulus expansion","synonyms":[{"name":"ovarian cumulus growth","type":"related"}],"termid":"GO:0001550"}


id: GO:0000232
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the nucleus during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear interphase chromosome (obsolete GO:0000232)","synonyms":[{"name":"nuclear interphase chromosome","type":"exact"}],"termid":"GO:0000232"}


id: PBO:0077125
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 4","termid":"PBO:0077125"}


id: PBO:0077150
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 1","termid":"PBO:0077150"}


id: MONDO:0017387
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant neoplasm of uncertain differentiation, characterized by the presence of epithelioid cells forming nodular patterns. The nodules often undergo central necrosis, resulting in a pseudogranulomatous growth pattern. It usually occurs in young adults. The most common sites of involvement are the extremities (distal-type epithelioid sarcoma), and less frequently the pelvis, perineum, and genital organs (proximal-type epithelioid sarcoma).","definition_xrefs":["NCIT:C3714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid sarcoma","secondary_identifiers":["Orphanet:293202","ONCOTREE:EPIS","MedDRA:10015099","MEDGEN:104753","ICDO:8804/3","GARD:10181","DOID:6193","UMLS:C0205944"],"synonyms":[{"name":"ES","type":"exact"},{"name":"epithelioid cell sarcoma","type":"exact"},{"name":"epithelioid sarcoma","type":"exact"}],"termid":"MONDO:0017387","xrefs":{"Monarch":{"xref_id":"0017387"}}}


id: GO:0070894
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of regulation of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transposon integration (obsolete GO:0070894)","termid":"GO:0070894"}


id: PR:Q9UST6
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.08","synonyms":[{"name":"Spom972h-spc24","type":"exact"}],"termid":"PR:Q9UST6"}


id: GO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a processed miRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:rph","PMID:15738428","PMID:21554756","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"miRNA transport","termid":"GO:1990428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0006913"],"is_obsolete":false,"name":"miRNA export from nucleus","termid":"GO:0061716"}


id: PBO:0078099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 6B","termid":"PBO:0078099"}


id: PBO:0031806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_at_mitotic_metaphase/anaphase_transition","termid":"PBO:0031806"}


id: GO:0099626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Regulation of presynaptic cytosolic calcium ion concentrations via the action of voltage-gated calcium ion channels.","definition_xrefs":["GOC:dos","PMID:15548655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels","termid":"GO:0099511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels","synonyms":[{"name":"voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099626"}


id: PBO:0086392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the protein phosphatase type 2A complex","termid":"PBO:0086392"}


id: GO:0007085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear membrane vesicle binding to chromatin (obsolete GO:0007085)","synonyms":[{"name":"nuclear membrane vesicle binding to chromatin","type":"exact"}],"termid":"GO:0007085"}


id: GO:1903094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein K48-linked deubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:21097510","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein deubiquitination","termid":"GO:0090086"},{"relation_name":"is_a","term_name":"regulation of protein K48-linked deubiquitination","termid":"GO:1903093"},{"relation_name":"negatively_regulates","term_name":"protein K48-linked deubiquitination","termid":"GO:0071108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein K48-linked deubiquitination","synonyms":[{"name":"down regulation of protein K48-linked deubiquitination","type":"exact"},{"name":"down-regulation of protein K48-linked deubiquitination","type":"exact"},{"name":"downregulation of protein K48-linked deubiquitination","type":"exact"},{"name":"inhibition of protein K48-linked deubiquitination","type":"narrow"}],"termid":"GO:1903094"}


id: PBO:0036011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_vegetative_growth","termid":"PBO:0036011"}


id: MONDO:0011862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary spastic paraplegia that has material basis in variation in the chromosome region 13q14.","definition_xrefs":["PMID:12499481","DOID:0110775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 24","secondary_identifiers":["GARD:9296","Orphanet:101004","MEDGEN:334784","MESH:C564375","OMIM:607584","UMLS:C1843569"],"synonyms":[{"name":"SPG24","type":"exact"},{"name":"autosomal recessive spastic paraplegia 24","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 24","type":"exact"},{"name":"hereditary spastic paraplegia type 24","type":"exact"},{"name":"spastic paraplegia 24","type":"related"},{"name":"spastic paraplegia 24, autosomal recessive","type":"related"}],"termid":"MONDO:0011862","xrefs":{"Monarch":{"xref_id":"0011862"}}}


id: GO:0010774
data:
  {"annotated_genes":["SJAG_04950","SJAG_02267","SJAG_03751"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79259,88824,100872],"is_not":false,"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0008150","GO:0140013","GO:0006259"],"is_obsolete":false,"name":"meiotic strand invasion involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010774","terms_by_termid":{"GO:0010774":null}}


id: PR:Q10325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.13c","synonyms":[{"name":"Spom972h-mst2","type":"exact"}],"termid":"PR:Q10325"}


id: PBO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine hydroxylase (predicted)","termid":"PBO:0002610"}


id: PBO:0049578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3-3A divergent transcript","termid":"PBO:0049578"}


id: PBO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit Rnh201 (predicted)","termid":"PBO:0001448"}


id: PBO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotetrameric","termid":"PBO:0001751"}


id: GO:0034245
data:
  {"annotated_genes":["SJAG_03014","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77797,87755],"is_not":false,"summary":null,"term":"GO:0034245"}]},"cv_name":"cellular_component","definition":"A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form.","definition_xrefs":["PMID:7929382","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03014":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial DNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial RNA polymerase complex","type":"broad"},{"name":"mitochondrial RNA polymerase holoenzyme complex","type":"exact"}],"termid":"GO:0034245","terms_by_termid":{"GO:0034245":null}}


id: PBO:0084593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein;YGR272C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGR271C-A","termid":"PBO:0084593"}


id: MONDO:0021012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"visceral leishmaniasis","termid":"MONDO:0005445"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to visceral leishmaniasis, 1","secondary_identifiers":["MEDGEN:370034","OMIM:608207","UMLS:C1969520"],"synonyms":[{"name":"KAZA1","type":"exact"},{"name":"kala-Azar, susceptibility to, 1","type":"exact"},{"name":"leishmaniasis, visceral, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0021012","xrefs":{"Monarch":{"xref_id":"0021012"}}}


id: GO:1990379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipid molecules passing through the blood-brain barrier.","definition_xrefs":["PMID:24345162","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lipid transport across blood-brain barrier","synonyms":[{"name":"lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1990379"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: MONDO:0024541
data:
  {"annotated_genes":["SJAG_03805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86784],"is_not":false,"summary":null,"term":"MONDO:0024541"}]},"cv_name":"mondo","definition":"Any tricho-hepato-enteric syndrome in which the cause of the disease is a mutation in the TTC37 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichohepatoenteric syndrome","termid":"MONDO:0009105"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"trichohepatoenteric syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111415","MEDGEN:1644087","UMLS:C4551982","OMIM:222470"],"synonyms":[{"name":"THES1","type":"related"},{"name":"TRICHOHEPATOENTERIC syndrome 1","type":"exact"},{"name":"TTC37 tricho-hepato-enteric syndrome","type":"exact"},{"name":"The syndrome","type":"related"},{"name":"diarrhea, fatal infantile, with trichorrhexis nodosa","type":"related"},{"name":"diarrhea, syndromic","type":"related"},{"name":"tricho-hepato-enteric syndrome caused by mutation in TTC37","type":"exact"},{"name":"trichohepatoenteric syndrome 1","type":"exact"}],"termid":"MONDO:0024541","terms_by_termid":{"MONDO:0024541":null},"xrefs":{"Monarch":{"xref_id":"0024541"}}}


id: PBO:0028731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylselenocysteine_level_during_vegetative_growth","termid":"PBO:0028731"}


id: PR:Q09782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI ethanolamine phosphate transferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23072:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI ethanolamine phosphate transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.03","secondary_identifiers":["UniProtKB:Q09782"],"synonyms":[{"name":"SPAC13G6.03","type":"related"},{"name":"Spom972h-PIGG","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gpi7","type":"related"}],"termid":"PR:Q09782"}


id: MONDO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease, multisystem, infantile-onset","secondary_identifiers":["OMIMPS:615952"],"termid":"MONDO:0000213","xrefs":{"Monarch":{"xref_id":"0000213"}}}


id: MONDO:0004567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decrease in peristalsis in the absence of a mechanical bowel obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ileus","secondary_identifiers":["UMLS:C1258215","MESH:D045823","DOID:8440","MEDGEN:219874","NCIT:C37979","SCTID:710572000"],"synonyms":[{"name":"ileus of intestine","type":"exact"}],"termid":"MONDO:0004567","xrefs":{"Monarch":{"xref_id":"0004567"}}}


id: PBO:0053829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1094","termid":"PBO:0053829"}


id: FYPO:0008180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the RNA polymerase II CTD domain is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II CTD binding","termid":"FYPO:0008180"}


id: PBO:0043501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein 2","termid":"PBO:0043501"}


id: PBO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major vault protein","termid":"PBO:0060215"}


id: PR:Q9HGL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Ts, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11741:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Ts, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.07c","secondary_identifiers":["UniProtKB:Q9HGL5"],"synonyms":[{"name":"EF-Ts (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"EF-TsMt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC800.07c","type":"related"},{"name":"Spom972h-TSFM","type":"exact"}],"termid":"PR:Q9HGL5"}


id: PBO:0059085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON2 homolog, regulator of endosome-to-Golgi trafficking","termid":"PBO:0059085"}


id: MONDO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the hypoglossal nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglossal nerve disorder","secondary_identifiers":["DOID:13814","MESH:D020437","ICD9:352.5","MEDGEN:57513","NCIT:C26954","SCTID:24777009","UMLS:C0152181"],"synonyms":[{"name":"disease of hypoglossal nerve","type":"exact"},{"name":"disease or disorder of hypoglossal nerve","type":"exact"},{"name":"disorder of 12th nerve","type":"exact"},{"name":"disorder of XII nerve","type":"exact"},{"name":"disorder of hypoglossal [12th] nerve","type":"exact"},{"name":"disorder of hypoglossal nerve","type":"exact"},{"name":"disorder of the XII nerve","type":"exact"},{"name":"hypoglossal nerve disease","type":"exact"},{"name":"hypoglossal nerve disease or disorder","type":"exact"},{"name":"hypoglossal nerve disorder","type":"exact"},{"name":"twelfth nerve disorder","type":"exact"}],"termid":"MONDO:0001810","xrefs":{"Monarch":{"xref_id":"0001810"}}}


id: MONDO:0011590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anisomastia","secondary_identifiers":["MEDGEN:381317","MESH:C565299","OMIM:605746","UMLS:C1854013"],"synonyms":[{"name":"anisomastia","type":"exact"}],"termid":"MONDO:0011590","xrefs":{"Monarch":{"xref_id":"0011590"}}}


id: MONDO:0015071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that involves the middle ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"neoplasm of middle ear","termid":"MONDO:0021366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear neuroendocrine tumor","secondary_identifiers":["MEDGEN:931137","Orphanet:100084","UMLS:C4305468","GARD:19759","SCTID:717918002","icd11.foundation:1437498002"],"synonyms":[{"name":"middle ear NET","type":"exact"},{"name":"middle ear neuroendocrine neoplasm","type":"exact"},{"name":"middle ear neuroendocrine tumor","type":"exact"},{"name":"middle ear neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"neuroendocrine neoplasm of middle ear","type":"exact"},{"name":"neuroendocrine tumor of middle ear","type":"exact"},{"name":"neuroendocrine tumour of middle ear","type":"exact"}],"termid":"MONDO:0015071","xrefs":{"Monarch":{"xref_id":"0015071"}}}


id: MONDO:0015127
data:
  {"annotated_genes":["SJAG_04110","SJAG_00301","SJAG_03418","SJAG_03698","SJAG_02829","SJAG_04398","SJAG_03597","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[86247,86248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[87345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"},{"annotations":[85852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic hypothalamic or pituitary disease (obsolete MONDO:0015968)","termid":"MONDO:0015968"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_00321":null,"SJAG_02829":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"pituitary deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:292840069","Orphanet:101957","GARD:19801","ICD10CM:E23.0"],"termid":"MONDO:0015127","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null,"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0015127"}}}


id: GO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-lysine 5,6-aminomutase activity (obsolete GO:0047702)","synonyms":[{"name":"b-lysine 5,6-aminomutase activity","type":"exact"}],"termid":"GO:0047702"}


id: GO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a calcium or calmodulin-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction (obsolete GO:0075133)","synonyms":[{"name":"modulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"perturbation of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075133"}


id: MONDO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital microgastria is a rare malformation where the embryological development of the stomach is interrupted, leading to an abnormally small foregut in newborns and characterized by extreme feeding intolerance and malnutrition along with growth retardation and death if untreated. It is usually associated with multiple congenital anomalies.","definition_xrefs":["Orphanet:199293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital microgastria","secondary_identifiers":["GARD:20330","icd11.foundation:1695007532","UMLS:C0266150","SCTID:83714006","MEDGEN:82732","ICD9:750.7"],"termid":"MONDO:0016041","xrefs":{"Monarch":{"xref_id":"0016041"}}}


id: PBO:0117185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOT1L antisense RNA 1","termid":"PBO:0117185"}


id: GO:0018240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the sulfur atom of peptidyl-cysteine, forming S-glycosyl-L-cysteine.","definition_xrefs":["RESID:AA0152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein S-linked glycosylation","termid":"GO:0018280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein S-linked glycosylation via cysteine","synonyms":[{"name":"protein amino acid S-linked glycosylation via cysteine","type":"exact"}],"termid":"GO:0018240"}


id: PBO:0071010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 12","termid":"PBO:0071010"}


id: GO:1902410
data:
  {"annotated_genes":["SJAG_02215","SJAG_01665","SJAG_03379","SJAG_04358","SJAG_04498","SJAG_05179","SJAG_01114","SJAG_03936","SJAG_00082","SJAG_00442","SJAG_04887","SJAG_04077","SJAG_04666","SJAG_03915","SJAG_03045","SJAG_03342","SJAG_02592","SJAG_01143","SJAG_01732","SJAG_00700","SJAG_04982","SJAG_01787","SJAG_02838","SJAG_02700","SJAG_03048","SJAG_01188","SJAG_04690","SJAG_01215","SJAG_02392","SJAG_04776","SJAG_00845","SJAG_01805","SJAG_02380","SJAG_05290","SJAG_02916","SJAG_03596","SJAG_01453","SJAG_03704","SJAG_03309","SJAG_02222","SJAG_04703","SJAG_03631","SJAG_04930","SJAG_01943","SJAG_01894","SJAG_05285","SJAG_00228","SJAG_02431","SJAG_03581","SJAG_00514","SJAG_00268","SJAG_01889","SJAG_00256","SJAG_00279","SJAG_04597","SJAG_00807","SJAG_03123","SJAG_03703","SJAG_03025","SJAG_04468"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91632,100089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"},{"annotations":[119906,76705,88601,75291,102882,92881,102739,72901,112613,98248,95621,112178,92931,118764,97977,75942,98052,118179,99225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77785],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[101252,95622,101023,112614,102740,99226,88602,97978,98358,118180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[88614,119519,96655,109169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[80780,99614,102961,106447,108929,113383,104984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[102684],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[104015],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[102689],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[90339,94747],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[94916,113671,94748,87878,110835],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[104020,91107,119520,111077],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[115773,90209,106704,107366,94143,105504,118192,113672,92757,78276],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[92758,87879,94751],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[106431,114688],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[94149,119676],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[88195,111684,101710],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[116122],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"Any cytokinetic process that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00256":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00442":null,"SJAG_00514":null,"SJAG_00700":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01453":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01889":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02838":null,"SJAG_02916":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03123":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03379":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03915":null,"SJAG_03936":null,"SJAG_04077":null,"SJAG_04358":null,"SJAG_04468":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04776":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null,"SJAG_05179":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:1902410","terms_by_termid":{"GO:0031671":null,"GO:0061796":null,"GO:0120306":null,"GO:0140278":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PBO:0063388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5 pseudogene 2","termid":"PBO:0063388"}


id: MONDO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofrontofacionasal dysostosis (obsolete MONDO:0000717)","termid":"MONDO:0000717","xrefs":{"Monarch":{"xref_id":"0000717"}}}


id: PBO:0018116
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukarotes only","termid":"PBO:0018116"}


id: SO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a selenocysteine anticodon, and a 3' selenocysteine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"selenocysteine_tRNA_primary_transcript","termid":"SO:0005856"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteinyl_tRNA","synonyms":[{"name":"selenocysteinyl tRNA","type":"exact"},{"name":"selenocysteinyl-transfer RNA","type":"exact"},{"name":"selenocysteinyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0005857"}


id: MONDO:0003649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the esophagus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal neuroendocrine tumor","secondary_identifiers":["Orphanet:506136","GARD:22058","MEDGEN:459486","UMLS:C2987260","DOID:5784","NCIT:C95616"],"synonyms":[{"name":"NEN of esophagus","type":"exact"},{"name":"NEN of oesophagus","type":"exact"},{"name":"esophageal NEN","type":"exact"},{"name":"esophageal NET","type":"exact"},{"name":"esophageal neuroendocrine neoplasm","type":"exact"},{"name":"esophageal neuroendocrine tumor","type":"exact"},{"name":"esophageal well differentiated endocrine tumor","type":"exact"},{"name":"esophageal well differentiated endocrine tumor/carcinoma","type":"exact"},{"name":"esophageal well differentiated endocrine tumour","type":"exact"},{"name":"esophagus NET","type":"exact"},{"name":"esophagus neuroendocrine neoplasm","type":"exact"},{"name":"esophagus neuroendocrine tumor","type":"exact"},{"name":"esophagus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"neuroendocrine neoplasm of esophagus","type":"exact"},{"name":"neuroendocrine neoplasm of oesophagus","type":"exact"},{"name":"neuroendocrine tumor of esophagus","type":"exact"},{"name":"neuroendocrine tumour of oesophagus","type":"exact"},{"name":"oesophagus NET","type":"exact"},{"name":"oesophagus neuroendocrine neoplasm","type":"exact"},{"name":"oesophagus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"oesophagus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003649","xrefs":{"Monarch":{"xref_id":"0003649"}}}


id: GO:0047771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-5-carboxymethylhydantoin + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["EC:3.5.2.4","RHEA:12028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"carboxymethylhydantoinase activity","secondary_identifiers":["MetaCyc:CARBOXYMETHYLHYDANTOINASE-RXN","KEGG_REACTION:R02284"],"synonyms":[{"name":"L-5-carboxymethylhydantoin amidohydrolase activity","type":"related"},{"name":"hydantoin hydrolase activity","type":"related"}],"termid":"GO:0047771"}


id: MONDO:0016262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the uterine corpus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C6340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed endometrial stromal and smooth muscle tumor","termid":"MONDO:0004526"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"uterine corpus sarcoma","termid":"MONDO:0005210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"leiomyosarcoma of the corpus uteri","secondary_identifiers":["DOID:5289","EFO:1001974","Orphanet:213625","NORD:1817","SCTID:447389009","ONCOTREE:ULMS","GARD:20477","UMLS:C0280631","MEDGEN:83679"],"synonyms":[{"name":"Uterine Leiomyosarcoma","type":"exact"},{"name":"body of uterus leiomyosarcoma","type":"exact"},{"name":"corpus uteri leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma - uterus","type":"exact"},{"name":"leiomyosarcoma of body of uterus","type":"exact"},{"name":"leiomyosarcoma of corpus uteri","type":"exact"},{"name":"leiomyosarcoma of the body of uterus","type":"exact"},{"name":"leiomyosarcoma of the corpus uteri","type":"exact"},{"name":"leiomyosarcoma of the uterine body","type":"exact"},{"name":"leiomyosarcoma of the uterine corpus","type":"exact"},{"name":"leiomyosarcoma of the uterus","type":"exact"},{"name":"leiomyosarcoma of uterine body","type":"exact"},{"name":"leiomyosarcoma of uterine corpus","type":"exact"},{"name":"leiomyosarcoma of uterus","type":"exact"},{"name":"uterine body leiomyosarcoma","type":"exact"},{"name":"uterine corpus leiomyosarcoma","type":"exact"},{"name":"uterine leiomyosarcoma","type":"related"},{"name":"uterus leiomyosarcoma","type":"related"}],"termid":"MONDO:0016262","xrefs":{"Monarch":{"xref_id":"0016262"}}}


id: MONDO:0009086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-small bowel diverticulosis-neuropathy syndrome is characterized by progressive sensorineural deafness, progressive sensory neuropathy and gastrointestinal abnormalities (progressive loss of gastric motility, small bowel diverticulosis).","definition_xrefs":["Orphanet:3217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-small bowel diverticulosis-neuropathy syndrome","secondary_identifiers":["MESH:C537305","MEDGEN:347426","OMIM:221400","SCTID:733071009","GARD:2568","UMLS:C1857338"],"synonyms":[{"name":"Groll Hirschowitz syndrome","type":"related"},{"name":"Groll-Hirschowitz syndrome","type":"exact"},{"name":"deafness, nerve type, with mesenteric diverticula of small bowel and progressive sensory neuropathy","type":"related"},{"name":"nerve type deafness with mesenteric diverticula of small bowel and progressive sensory neuropathy","type":"related"}],"termid":"MONDO:0009086","xrefs":{"Monarch":{"xref_id":"0009086"}}}


id: PBO:0064806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1B","termid":"PBO:0064806"}


id: PBO:0035807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_hydroxyurea","termid":"PBO:0035807"}


id: MONDO:0015106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare urogenital disease (obsolete MONDO:0015106)","secondary_identifiers":["Orphanet:101433"],"termid":"MONDO:0015106","xrefs":{"Monarch":{"xref_id":"0015106"}}}


id: GO:0042710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["PMID:11932229","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggregation of unicellular organisms","termid":"GO:0098630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm formation","termid":"GO:0042710"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: PBO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 38","termid":"PBO:0044351"}


id: MONDO:0014736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the MORC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2Z","secondary_identifiers":["MEDGEN:1800448","DOID:0110181","GARD:17829","OMIM:616688","Orphanet:466768","UMLS:C5569025"],"synonyms":[{"name":"CMT2Z","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in MORC2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2Z","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2Z","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2z","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2Z","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2Z","type":"related"},{"name":"MORC2 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to MORC2 mutation","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2Z","type":"related"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2Z","type":"exact"}],"termid":"MONDO:0014736","xrefs":{"Monarch":{"xref_id":"0014736"}}}


id: PBO:0055607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3046","termid":"PBO:0055607"}


id: PBO:0060756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4","termid":"PBO:0060756"}


id: PBO:0113372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with structural similarity to lipid transport protein Vps13p; localizes to multiple membrane contact sites between organelles; role in phospholipid homeostasis and lipidomic adaptation to cold; required for fermentation at low temperature; plays a role in phosphatidylethanolamine metabolism and secretory protein maturation; non-tagged protein is detected in highly purified mitochondria in HTP studies","termid":"PBO:0113372"}


id: PBO:0055966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and coiled-coil centrosomal protein 1","termid":"PBO:0055966"}


id: MONDO:1012421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy with cerebellar abiotrophy, non-human animal","termid":"MONDO:1011886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy with cerebellar abiotrophy, domestic cat","secondary_identifiers":["OMIA:001606-9685"],"termid":"MONDO:1012421","xrefs":{"Monarch":{"xref_id":"1012421"}}}


id: GO:0070772
data:
  {"annotated_genes":["SJAG_02289","SJAG_00638","SJAG_02665","SJAG_01236"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80610,88073,110299,113864],"is_not":false,"summary":null,"term":"GO:0070772"}]},"cv_name":"cellular_component","definition":"A phosphatidylinositol kinase complex that contains a phosphatidylinositol-3-phosphate 5-kinase subunit (Fab1p in yeast; PIKFYVE in mammals), a kinase activator, and a phosphatase, and may also contain additional proteins; it is involved in regulating the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate. In mammals the complex is composed of PIKFYVE, FIG4 and VAC14. In yeast it is composed of Atg18p, Fig4p, Fab1p, Vac14p and Vac7p.","definition_xrefs":["PMID:19037259","PMID:19158662","PMID:18950639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00638":null,"SJAG_01236":null,"SJAG_02289":null,"SJAG_02665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0032991","GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"PAS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"autophagy-specific phosphatidylinositol 3-kinase complex","type":"related"}],"termid":"GO:0070772","terms_by_termid":{"GO:0070772":null}}


id: GO:0021861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the forebrain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","PMID:16226447","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial glial cell differentiation","termid":"GO:0060019"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain radial glial cell differentiation","synonyms":[{"name":"radial glial cell differentiation in forebrain","type":"exact"}],"termid":"GO:0021861"}


id: GO:0042491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized inner cell acquires specialized features of an auditory hair cell.","definition_xrefs":["GOC:jl","CL:0000201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear auditory receptor cell differentiation","synonyms":[{"name":"auditory hair cell differentiation","type":"exact"},{"name":"auditory receptor cell differentiation","type":"related"}],"termid":"GO:0042491"}


id: GO:1901768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbapenem.","definition_xrefs":["PMID:9402024","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"carbapenem metabolic process","termid":"GO:1901767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem catabolic process","synonyms":[{"name":"carbapenem breakdown","type":"exact"},{"name":"carbapenem catabolism","type":"exact"},{"name":"carbapenem degradation","type":"exact"}],"termid":"GO:1901768"}


id: MOD:01876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(12)C labeled succinyl group.","definition_xrefs":["PubMed:12175151","PubMed:12716131","Unimod:64","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, light form (+4amu, 4H2) site N-term","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01876"}


id: PBO:0086100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 20S pre-rRNA processing; involved in processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086100"}


id: PBO:0058507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5697","termid":"PBO:0058507"}


id: PBO:0038421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC1 complementation factor","termid":"PBO:0038421"}


id: GO:0045320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the chloroplast thylakoid membrane; it catalyzes the phosphorylation of ADP to ATP during photo-phosphorylation.","definition_xrefs":["ISBN:0716743663","GOC:mtg_sensu","GOC:pj"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast proton-transporting ATP synthase complex (obsolete GO:0045320)","synonyms":[{"name":"chloroplast hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"broad"}],"termid":"GO:0045320"}


id: GO:0051219
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78429,72881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphoprotein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphorylated protein binding","type":"exact"}],"termid":"GO:0051219","terms_by_termid":{"GO:1990269":null}}


id: PBO:0071878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 16","termid":"PBO:0071878"}


id: SO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element bound by the MADS family of transcription factors with consensus 5'-(C/T)TA(T/A)4TA(G/A)-3'.","definition_xrefs":["PMID:1748287","PMID:7623803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CArG_box","synonyms":[{"name":"CArG box","type":"exact"}],"termid":"SO:0002156"}


id: PBO:0064129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKIA antisense RNA 1","termid":"PBO:0064129"}


id: GO:1990751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a Schwann cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["PMID:16203995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schwann cell migration","termid":"GO:0036135"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell chemotaxis","termid":"GO:1990751"}


id: PBO:0003296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent microtubule severing protein (predicted)","termid":"PBO:0003296"}


id: PBO:0052178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 9","termid":"PBO:0052178"}


id: GO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of killing of cells of another organism","termid":"GO:0051712"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated cytotoxicity","termid":"GO:0070960"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of symbiont cell","synonyms":[{"name":"activation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"upregulation of neutrophil mediated killing of symbiont cell","type":"exact"}],"termid":"GO:0070961"}


id: GO:1905478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:10377385"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glutamate-ammonia ligase activity (obsolete GO:1905478)","synonyms":[{"name":"regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"regulation of L-glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905478"}


id: PBO:0041092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 1","termid":"PBO:0041092"}


id: MONDO:0016003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Ehrlichia.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ehrlichiosis","secondary_identifiers":["MEDGEN:39039","icd11.foundation:1116297863","Orphanet:1902","DOID:10242","GARD:2092","MESH:D016873","SCTID:240626005","ICD9:082.40","UMLS:C0085399","ICD9:082.4"],"synonyms":[{"name":"human ehrlichiosis","type":"exact"}],"termid":"MONDO:0016003","xrefs":{"Monarch":{"xref_id":"0016003"}}}


id: FYPO:0004170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"abolished centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at centromeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0004170"}


id: PATO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A adhesivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"adhesive","termid":"PATO:0002331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased adhesivity","termid":"PATO:0002334"}


id: GO:0047904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + keto-D-fructose = 5-dehydro-D-fructose + a ubiquinol.","definition_xrefs":["RHEA:22304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fructose 5-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00873","EC:1.1.5.14","MetaCyc:FRUCTOSE-5-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-fructose dehydrogenase activity","type":"related"}],"termid":"GO:0047904"}


id: GO:0014887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle adaptation","synonyms":[{"name":"cardiac muscle plasticity","type":"related"}],"termid":"GO:0014887"}


id: PATO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000478 poor value (obsolete PATO:0000478)","termid":"PATO:0000478"}


id: CHEBI:48775
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadmium(2+)","termid":"CHEBI:48775"}


id: FYPO:0007330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to formaldehyde. Cells stop growing (and may die) at a concentration of formaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to formaldehyde","synonyms":[{"name":"hypersensitive to formaldehyde","type":"exact"},{"name":"sensitive to formaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to formaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0007330"}


id: PBO:0080834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 2","termid":"PBO:0080834"}


id: PBO:0038391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_transcript","termid":"PBO:0038391"}


id: PBO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 6","termid":"PBO:0048161"}


id: PBO:0059841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 1","termid":"PBO:0059841"}


id: PBO:0063215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionyl-CoA carboxylase subunit beta","termid":"PBO:0063215"}


id: GO:0036341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of hardening of a chitin-based cuticle by protein cross-linking, and the incorporation of phenolic precursors. This mechanism of cuticle hardening occurs in insects and is usually accompanied by darkening of the cuticle.","definition_xrefs":["GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle sclerotization by protein cross-linking","synonyms":[{"name":"chitin-based cuticle sclerotization by protein cross-linking and cuticle tanning","type":"narrow"}],"termid":"GO:0036341"}


id: GO:0098615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl selenide => S-adenosyl-L-homocysteine + trimethylselenonium.","definition_xrefs":["PMID:3350800","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"dimethyl selenide methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408554"],"termid":"GO:0098615"}


id: SO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The stem of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_stem","synonyms":[{"name":"miRNA stem","type":"exact"}],"termid":"SO:0001245"}


id: PR:000050398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:23333317","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/UnPhos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/UnPhos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, PR:000026291","type":"narrow"},{"name":"cut12/UnPhos(T75,T78)","type":"exact"}],"termid":"PR:000050398"}


id: FYPO:0003358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to miconazole. Cells stop growing (and may die) at a concentration of miconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to miconazole","synonyms":[{"name":"hypersensitive to miconazole","type":"exact"},{"name":"sensitive to miconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to miconazole during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003358"}


id: PBO:0063716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 4","termid":"PBO:0063716"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: GO:0047021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prostaglandin E(1) = 15-dehydro-prostaglandin E1 + H+ + NADPH.","definition_xrefs":["RHEA:11636","EC:1.1.1.197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R04552","MetaCyc:1.1.1.197-RXN"],"synonyms":[{"name":"(13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NADP+ 15-oxidoreductase activity","type":"related"},{"name":"NADP-dependent 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"NADP-linked 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"NADP-specific 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"type II 15-hydroxyprostaglandin dehydrogenase activity","type":"related"}],"termid":"GO:0047021"}


id: FYPO:0006695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-methionine (SAM) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-methionine level during vegetative growth","synonyms":[{"name":"decreased S-adenosyl-L-methionine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-methionine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylmethionine level during vegetative growth","type":"exact"},{"name":"decreased cellular SAM level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-methionine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006695"}


id: PBO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter A, lysophospholipid","termid":"PBO:0056804"}


id: PBO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase","termid":"PBO:0000143"}


id: PBO:0067497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 633, pseudogene","termid":"PBO:0067497"}


id: PBO:0110393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEFH pseudogene 1","termid":"PBO:0110393"}


id: MOD:01562
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01562"}


id: PBO:0013023
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial acrofacial dysostosis syndrome","termid":"PBO:0013023"}


id: MONDO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microscopic colitis characterized by the accumulation of lymphocytes in the colonic epithelium and lamina propria. Patients present with chronic watery diarrhea. Colonoscopy reveals normal colonic mucosa. The diagnosis is made with the microscopic examination of the colonic biopsy samples.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microscopic colitis","termid":"MONDO:0000702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"lymphocytic colitis","secondary_identifiers":["MESH:D046730","Orphanet:65279","ICD9:558.9","SCTID:31437008","icd11.foundation:1629251056","DOID:0060184","MEDGEN:98006","MedDRA:10025268","ICD10CM:K52.832","EFO:1001294","NCIT:C27147","UMLS:C0400822"],"termid":"MONDO:0000704","xrefs":{"Monarch":{"xref_id":"0000704"}}}


id: MONDO:0006270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive adenocarcinoma of the breast characterized by a proliferation of monomorphic cells completely filling the lumina. The overall lobular architecture is preserved. It is frequently multifocal (90% in some series) and bilateral. It seldom becomes invasive; however there is an increased risk of infiltrating ductal adenocarcinoma.","definition_xrefs":["NCIT:C4018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobular neoplasia","termid":"MONDO:0002486"},{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lobular breast carcinoma in situ","secondary_identifiers":["ONCOTREE:LCIS","UMLS:C0279563","EFO:1000326","ICDO:8520/2","SCTID:109888004","MEDGEN:79007"],"synonyms":[{"name":"LCIS","type":"exact"},{"name":"breast lobular carcinoma in situ","type":"related"},{"name":"lobular Ca in situ of breast","type":"exact"},{"name":"lobular Ca in situ of the breast","type":"exact"},{"name":"lobular breast carcinoma in situ","type":"exact"},{"name":"lobular carcinoma in situ","type":"exact"},{"name":"lobular carcinoma in situ (LCIS)","type":"exact"},{"name":"lobular carcinoma in situ of breast","type":"exact"},{"name":"lobular carcinoma in situ of the breast","type":"exact"},{"name":"lobular carcinoma in situ of the breast (LCIS)","type":"exact"},{"name":"non-infiltrating lobular breast carcinoma","type":"exact"},{"name":"non-infiltrating lobular carcinoma","type":"exact"},{"name":"non-infiltrating lobular carcinoma of breast","type":"exact"},{"name":"non-infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"non-invasive lobular breast carcinoma","type":"exact"},{"name":"non-invasive lobular carcinoma of breast","type":"exact"},{"name":"non-invasive lobular carcinoma of the breast","type":"exact"}],"termid":"MONDO:0006270","xrefs":{"Monarch":{"xref_id":"0006270"}}}


id: PATO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/falciform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"falciform","synonyms":[{"name":"falcate","type":"exact"},{"name":"hooked","type":"exact"},{"name":"scythe-shaped","type":"exact"},{"name":"sickle-shaped","type":"exact"},{"name":"unciform","type":"exact"},{"name":"uncinate","type":"exact"}],"termid":"PATO:0002215"}


id: PBO:0046856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 6","termid":"PBO:0046856"}


id: PBO:0005087
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C promoter element Binding Factor","termid":"PBO:0005087"}


id: MONDO:0020363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"honey-droplet corneal dystrophy","secondary_identifiers":["UMLS:C0339300","GARD:19609","icd11.foundation:896313309","Orphanet:98958","MEDGEN:573075"],"termid":"MONDO:0020363","xrefs":{"Monarch":{"xref_id":"0020363"}}}


id: MONDO:0971006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I deficiency","termid":"MONDO:0011476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class I deficiency 1","secondary_identifiers":["OMIM:604571"],"termid":"MONDO:0971006","xrefs":{"Monarch":{"xref_id":"0971006"}}}


id: PBO:0058028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3977","termid":"PBO:0058028"}


id: PBO:0048947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT1 divergent transcript","termid":"PBO:0048947"}


id: MONDO:0002887
data:
  {"annotated_genes":["SJAG_03363","SJAG_03011","SJAG_00938","SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[87326,87327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"},{"annotations":[87265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"A disease involving the bile duct.","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:4138","MEDGEN:2240","SCTID:118926004","NCIT:C96716","MESH:D001649","UMLS:C0005395"],"synonyms":[{"name":"bile duct disease","type":"exact"},{"name":"bile duct disease or disorder","type":"exact"},{"name":"bile duct disorder","type":"exact"},{"name":"disease of bile duct","type":"exact"},{"name":"disease or disorder of bile duct","type":"exact"},{"name":"disorder of bile duct","type":"exact"}],"termid":"MONDO:0002887","terms_by_termid":{"MONDO:0010939":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0002887"}}}


id: PBO:0057361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-1","termid":"PBO:0057361"}


id: GO:0019991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a septate junction, an intercellular junction found in invertebrate epithelia that is characterized by a ladder like appearance in electron micrographs and thought to provide structural strength and to provide a barrier to diffusion of solutes through the intercellular space.","definition_xrefs":["PMID:5272312","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"septate junction assembly","termid":"GO:0019991"}


id: GO:0045835
data:
  {"annotated_genes":["SJAG_00364","SJAG_03327","SJAG_04259","SJAG_01082","SJAG_04287","SJAG_01330","SJAG_01680","SJAG_00266","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106637,114800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[114564,89400,116361,106934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[108286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[114092],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101659],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of nuclear division","termid":"GO:0051784"},{"relation_name":"negatively_regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiosis","type":"exact"},{"name":"down-regulation of meiosis","type":"exact"},{"name":"downregulation of meiosis","type":"exact"},{"name":"inhibition of meiosis","type":"narrow"},{"name":"negative regulation of meiosis","type":"exact"}],"termid":"GO:0045835","terms_by_termid":{"GO:0045128":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0038087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to an alpha-type platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"VEGF-A/PDGFRalpha signaling","type":"narrow"},{"name":"VEGF-activated PDGFRalpha signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"},{"name":"VEGF/PDGFRalpha signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor-alpha signaling pathway","type":"exact"}],"termid":"GO:0038087"}


id: MONDO:0010122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital thrombotic thrombocytopenic purpura is the hereditary form of thrombotic thrombocytopenic purpura (TTP) characterized by profound peripheral thrombocytopenia, microangiopathic hemolytic anemia (MAHA) and single or multiple organ failure of variable severity.","definition_xrefs":["Orphanet:93583"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"thrombotic thrombocytopenic purpura","termid":"MONDO:0018896"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"},{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"congenital thrombotic thrombocytopenic purpura","secondary_identifiers":["NANDO:1200317","NCIT:C131657","MEDGEN:224783","SCTID:373420004","ICD10CM:M31.3","OMIM:274150","GARD:9430","ICD9:287.33","UMLS:C1268935"],"synonyms":[{"name":"Microangiopathic hemolytic Anaemia","type":"related"},{"name":"Microangiopathic hemolytic Anemia","type":"related"},{"name":"Microangiopathic hemolytic Anemia, congenital","type":"related"},{"name":"Schulman-Upshaw syndrome","type":"related"},{"name":"TTP","type":"related"},{"name":"TTP, congenital","type":"related"},{"name":"USS","type":"related"},{"name":"Upshaw Factor, deficiency of","type":"related"},{"name":"Upshaw-Schulman syndrome","type":"exact"},{"name":"congenital ADAMTS-13 deficiency","type":"exact"},{"name":"congenital ADAMTS13 deficiency","type":"exact"},{"name":"congenital TTP","type":"exact"},{"name":"congenital thrombotic thrombocytopenic purpura","type":"exact"},{"name":"familial TTP","type":"exact"},{"name":"hereditary thrombotic thrombocytopenic purpura","type":"exact"},{"name":"thrombotic microangiopathy, familial","type":"related"},{"name":"thrombotic thrombocytopenic purpura, congenital","type":"related"},{"name":"thrombotic thrombocytopenic purpura, familial","type":"related"},{"name":"thrombotic thrombocytopenic purpura, hereditary","type":"exact"}],"termid":"MONDO:0010122","xrefs":{"Monarch":{"xref_id":"0010122"}}}


id: GO:0046032
data:
  {"annotated_genes":["SJAG_04334","SJAG_06621","SJAG_02945","SJAG_00839","SJAG_06622","SJAG_03373","SJAG_00027","SJAG_02369","SJAG_04495","SJAG_01310","SJAG_00685","SJAG_03828","SJAG_02009","SJAG_03903","SJAG_00461","SJAG_03660","SJAG_02135","SJAG_05314","SJAG_02785","SJAG_04192","SJAG_00605","SJAG_02107","SJAG_04048","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105779,109704,105780,109701,95349,105781,109705,103701,109706,109707,116652,98592,98321,106150,106149,109703,109702,103957,78212,94860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[73410,76379],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70422],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ADP catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP breakdown","type":"exact"},{"name":"ADP catabolism","type":"exact"},{"name":"ADP degradation","type":"exact"}],"termid":"GO:0046032","terms_by_termid":{"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0073719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src like adaptor","termid":"PBO:0073719"}


id: PBO:0076111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX17 divergent transcript","termid":"PBO:0076111"}


id: FYPO:0002776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sumoylated protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal level of sumoylated protein in cell","synonyms":[{"name":"normal level of sumoylated protein during vegetative growth","type":"exact"},{"name":"normal level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"normal sumoylated protein accumulation","type":"related"},{"name":"normal sumoylated protein level","type":"exact"}],"termid":"FYPO:0002776"}


id: GO:0003813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ser bond in complement component C3 alpha-chain to form C3a and C3b, and Arg bond in complement component C5 alpha-chain to form C5a and C5b.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete classical-complement-pathway C3/C5 convertase activity (obsolete GO:0003813)","synonyms":[{"name":"C3 convertase activity","type":"broad"},{"name":"C42","type":"related"},{"name":"C423","type":"related"},{"name":"C4b,2a","type":"related"},{"name":"C4b,2a,3b","type":"related"},{"name":"C5 convertase activity","type":"broad"},{"name":"classical-complement-pathway C3/C5 convertase activity","type":"exact"},{"name":"complement C2 activity","type":"broad"},{"name":"complement C3 convertase activity","type":"related"},{"name":"complement C42","type":"related"}],"termid":"GO:0003813"}


id: GO:0035211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a spermathecum, a sperm storage organ, are generated and organized. Paired spermathecae lie at the anterior end of the insect uterus on the dorsal side. Each spermatheca consists of an oval shaped capsule, connected to the uterus by a spermathecal stalk.","definition_xrefs":["PMID:12679097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermathecum morphogenesis","termid":"GO:0035211"}


id: PBO:0043455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 1","termid":"PBO:0043455"}


id: FYPO:0005372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which circular minichromosomes are lost at a higher frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah","PMID:11226171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during vegetative growth","termid":"FYPO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased circular minichromosome loss during vegetative growth","synonyms":[{"name":"increased circular minichromosome loss during mitotic cell cycle","type":"related"},{"name":"mitotic circular minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0005372"}


id: PATO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subulate","synonyms":[{"name":"awl-shaped","type":"exact"},{"name":"needle-like","type":"exact"}],"termid":"PATO:0001954"}


id: GO:0030276
data:
  {"annotated_genes":["SJAG_04565","SJAG_05296","SJAG_01748","SJAG_00104","SJAG_02177","SJAG_00152","SJAG_04644","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60634,68625,74072,80086,80114],"is_not":false,"summary":null,"term":"GO:0030276"},{"annotations":[74032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032050"},{"annotations":[78097,77219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032051"}]},"cv_name":"molecular_function","definition":"Binding to a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00152":null,"SJAG_01748":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_04565":null,"SJAG_04644":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"clathrin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0030276","terms_by_termid":{"GO:0030276":null,"GO:0032050":null,"GO:0032051":null}}


id: MONDO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Good syndrome (obsolete MONDO:0000585)","termid":"MONDO:0000585","xrefs":{"Monarch":{"xref_id":"0000585"}}}


id: MONDO:1011600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 diabetes mellitus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, domestic cat","termid":"MONDO:1010575"},{"relation_name":"is_a","term_name":"type 1 diabetes mellitus, non-human animal","termid":"MONDO:1011401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus, domestic cat","secondary_identifiers":["OMIA:000283-9685"],"termid":"MONDO:1011600","xrefs":{"Monarch":{"xref_id":"1011600"}}}


