# terms

id: GO:1990671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi medial cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion with Golgi medial cisterna membrane","termid":"GO:1990671"}


id: PBO:0042722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein B","termid":"PBO:0042722"}


id: MONDO:0975757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anastomosing haemangioma","secondary_identifiers":["MEDGEN:1385828","Orphanet:675359","UMLS:C4329301"],"termid":"MONDO:0975757","xrefs":{"Monarch":{"xref_id":"0975757"}}}


id: GO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of linking a protein to peptidoglycan via a carboxy terminal threonine carboxyl group through a pentaglycyl peptide to the lysine or diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0345"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan-protein cross-linking via L-threonyl-pentaglycyl-murein (obsolete GO:0042902)","termid":"GO:0042902"}


id: PBO:0026863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abolished_mitotic_sister_chromatid_separation,_with_mononucleate_and_anucleate_compartment_formation","termid":"PBO:0026863"}


id: PBO:0091691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crazy cell surface glycoprotein","termid":"PBO:0091691"}


id: PBO:0063176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and breast cancer overexpressed 1","termid":"PBO:0063176"}


id: GO:0070013
data:
  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id: MONDO:0017024
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id: GO:0046759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A form of viral release in which the nucleocapsid evaginates from the host nuclear membrane system, resulting in envelopment of the virus and cell lysis.","definition_xrefs":["ISBN:0072370319"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic virus budding from plasma membrane (obsolete GO:0046759)","synonyms":[{"name":"lytic plasma membrane viral budding","type":"exact"},{"name":"lytic viral budding from plasma membrane","type":"exact"},{"name":"lytic virus budding from plasma membrane","type":"exact"}],"termid":"GO:0046759"}


id: PBO:0066071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 1","termid":"PBO:0066071"}


id: SO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of a T-cell receptor chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_C_Gene","synonyms":[{"name":"T_cell_receptor_C_gene","type":"exact"}],"termid":"SO:0002134"}


id: FYPO:0000186
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119653],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[119511],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[119503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[119920,119921,119922],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"FYPO:0000671"},{"annotations":[119674,119554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119890,119889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"},{"annotations":[119536],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119905,119504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119654],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[119501,119500],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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id: PBO:0054133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1499","termid":"PBO:0054133"}


id: GO:0016827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-phosphorus bond.","definition_xrefs":["EC:3.11.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-phosphorus bonds","termid":"GO:0016827"}


id: PBO:0030906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_vegetative_growth","termid":"PBO:0030906"}


id: MONDO:0004347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0004347 (obsolete MONDO:0004347)","termid":"MONDO:0004347","xrefs":{"Monarch":{"xref_id":"0004347"}}}


id: MONDO:0021746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"},{"relation_name":"is_a","term_name":"pyelitis","termid":"MONDO:0006938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyelocystitis","secondary_identifiers":["MESH:D053653","UMLS:C0034184","MEDGEN:18778"],"synonyms":[{"name":"Cystopyelitis","type":"related"},{"name":"Pyelocystitis","type":"related"}],"termid":"MONDO:0021746","xrefs":{"Monarch":{"xref_id":"0021746"}}}


id: PBO:0017977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructokinase pfk1","termid":"PBO:0017977"}


id: PBO:0086451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane glycoprotein; has strong similarity to Vth1p and Pep1p/Vps10p; may be involved in vacuolar protein sorting","termid":"PBO:0086451"}


id: MONDO:0009449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia with defective radial spokes","secondary_identifiers":["UMLS:C0340035","SCTID:233664005","ICD9:759.89","MESH:C536286","GARD:2981","MEDGEN:137933","OMIM:242670"],"synonyms":[{"name":"cilia with defective radial spokes","type":"related"},{"name":"ciliary dyskinesia with defective radial spokes","type":"exact"},{"name":"immotile cilia syndrome due to defective radial spokes","type":"related"},{"name":"immotile cilia syndrome, due to defective radial spokes","type":"related"}],"termid":"MONDO:0009449","xrefs":{"Monarch":{"xref_id":"0009449"}}}


id: MONDO:0030013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 66","secondary_identifiers":["DOID:0111998","UMLS:C5394265","MEDGEN:1717128","OMIM:618847"],"synonyms":[{"name":"IMD66","type":"exact"},{"name":"IMMUNODEFICIENCY 66","type":"exact"},{"name":"immunodeficiency 66","type":"exact"}],"termid":"MONDO:0030013","xrefs":{"Monarch":{"xref_id":"0030013"}}}


id: MONDO:0005058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon, aggressive malignant smooth muscle neoplasm, usually occurring in post-menopausal women. It is characterized by a proliferation of neoplastic spindle cells. Morphologic variants include epithelioid, granular cell, inflammatory and myxoid leimyosarcomas.","definition_xrefs":["NCIT:C3158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cancer","termid":"MONDO:0002924"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"leiomyosarcoma","secondary_identifiers":["Orphanet:64720","NANDO:2200064","MedDRA:10024189","GARD:6880","EFO:0000564","ICDO:8890/3","MEDGEN:9711","ICD9:171.9","DOID:1967","ONCOTREE:LMS","SCTID:443719001","MESH:D007890","NORD:1356","UMLS:C0023269"],"synonyms":[{"name":"Leiomyosarcomas","type":"exact"},{"name":"leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma (excluding uterine leiomyosarcoma)","type":"exact"},{"name":"leiomyosarcoma - not uterine","type":"exact"},{"name":"leiomyosarcoma, malignant","type":"exact"}],"termid":"MONDO:0005058","xrefs":{"Monarch":{"xref_id":"0005058"}}}


id: _global:similar_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar_to","termid":"_global:similar_to"}


id: GO:0140922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of thermomorphogenesis.","definition_xrefs":["PMID:27250752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of thermomorphogenesis","termid":"GO:0140920"},{"relation_name":"positively_regulates","term_name":"thermomorphogenesis","termid":"GO:0140919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thermomorphogenesis","termid":"GO:0140922"}


id: MONDO:0700151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain or spinal cord tumor arising from glial cells that occurs in dogs.","definition_xrefs":["NCIT:C129297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine glioma","termid":"MONDO:0700151","xrefs":{"Monarch":{"xref_id":"0700151"}}}


id: GO:0070603
data:
  {"annotated_genes":["SJAG_03944","SJAG_03787","SJAG_02500","SJAG_00735","SJAG_04355","SJAG_04755","SJAG_00045","SJAG_00739","SJAG_02254","SJAG_02466","SJAG_02990","SJAG_05020","SJAG_03982","SJAG_02589","SJAG_02869","SJAG_03758","SJAG_02385","SJAG_02798","SJAG_04097","SJAG_01111","SJAG_02778","SJAG_03033","SJAG_01465","SJAG_04989","SJAG_03145","SJAG_00934","SJAG_03694","SJAG_01622","SJAG_02303","SJAG_02549","SJAG_05192","SJAG_00873","SJAG_05282","SJAG_04213","SJAG_03844","SJAG_01016","SJAG_03576","SJAG_00743","SJAG_02571","SJAG_00746","SJAG_00440","SJAG_02447","SJAG_02872","SJAG_01611","SJAG_04005","SJAG_04596","SJAG_03036","SJAG_03839","SJAG_05313","SJAG_03579"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76652,67070,72126,73028,101879,57880,94344,113449,70264,109367,115701,71836,72590,88143,73153,61288,89211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[88497,87997,73268,74059,92633,94488,94544,96223,79950,113434,90926,80120,94346,70894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016586"},{"annotations":[72001,108471,112412,113597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[87998,71905,72970,76432,70263,96224,107756,77240,94469,78221,113435,115310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016514"},{"annotations":[117751,73152,92710,109375,80370,115018,77218,76651,108193,96979,99287,70505,74013,98560,113452,113625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A protein complex that contains an ortholog of the Saccharomyces ATPase Swi2/Snf2 as one of the catalytic subunit components (ATPase) and mediates assembly of nucleosomes, changes to the spacing or structure of nucleosomes, or some combination of those activities in a manner that requires ATP.","definition_xrefs":["GOC:krc","GOC:mah","GOC:bhm","PMID:16155938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00440":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_00934":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01465":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02990":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03944":null,"SJAG_03982":null,"SJAG_04005":null,"SJAG_04097":null,"SJAG_04213":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04755":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"SWI/SNF superfamily-type complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090544"],"synonyms":[{"name":"BAF-type complex","type":"exact"},{"name":"SWI-SNF global transcription activator complex","type":"related"},{"name":"SWI-SNF-type complex","type":"exact"},{"name":"SWI/SNF-type complex","type":"related"},{"name":"SWI2/SNF2 superfamily ATP-dependent chromatin remodeling complex","type":"related"}],"termid":"GO:0070603","terms_by_termid":{"GO:0000812":null,"GO:0016514":null,"GO:0016586":null,"GO:0031011":null,"GO:0070824":null}}


id: GO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA metabolic process","synonyms":[{"name":"21U-RNA metabolism","type":"exact"}],"termid":"GO:0034585"}


id: GO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the septum transversum from its initial formation to the mature structure. The septum transversum is a portion of the trunk mesenchyme.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum transversum development","termid":"GO:0003343"}


id: PBO:0045673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 light intermediate chain 1","termid":"PBO:0045673"}


id: PBO:0030425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constricted_nucleus","termid":"PBO:0030425"}


id: MONDO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare photodermatosis (obsolete MONDO:0019304)","secondary_identifiers":["Orphanet:79390"],"synonyms":[{"name":"rare skin photosensitivity","type":"exact"}],"termid":"MONDO:0019304","xrefs":{"Monarch":{"xref_id":"0019304"}}}


id: PBO:0028065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone","termid":"PBO:0028065"}


id: PBO:0046342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7","termid":"PBO:0046342"}


id: GO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"kidney rudiment formation","termid":"GO:0072003"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros formation","synonyms":[{"name":"pronephric kidney formation","type":"exact"}],"termid":"GO:0072116"}


id: PR:Q9P3V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.01/SPBC1348.02/SPBPB2B2.19c.","definition_xrefs":["UniProtKB:Q9P3V8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C977.01/C1348.02/PB2B2.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.19c","synonyms":[{"name":"Spom972h-SPBPB2B2.19c","type":"exact"}],"termid":"PR:Q9P3V8"}


id: RO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction).","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_developmental_potential_involving","termid":"RO:0002384"}


id: MONDO:0022993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus caused by excessive intake of water due to psychological factors or damage to the thirst-regulating mechanism.","definition_xrefs":["NCIT:C129735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"primary polydipsia","termid":"MONDO:0040870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"dipsogenic diabetes insipidus","secondary_identifiers":["SCTID:82800008","UMLS:C0268813","DOID:0081058","MESH:C548013","MEDGEN:82829"],"synonyms":[{"name":"Dipsogenic diabetes insipidus","type":"exact"},{"name":"dipsogenic diabetes insipidus","type":"exact"},{"name":"primary polydipsia","type":"broad"}],"termid":"MONDO:0022993","xrefs":{"Monarch":{"xref_id":"0022993"}}}


id: MONDO:0021061
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87664,87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A hereditary neoplastic syndrome in which tumors grow in the nervous system. There are typically 3 main types recognized, but other forms with uncertain etiology exist.","definition_xrefs":["Wikipedia:Neurofibromatosis","NCIT:C6727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200225","SCTID:19133005","EFO:0008514","ICDO:9540/1","NANDO:1200227","MESH:D017253","ICD9:237.7","ICD9:237.71","NANDO:1200226","MEDGEN:58149","GARD:10420","UMLS:C0162678","NANDO:2201003","DOID:8712","ICD9:237.72","ICD9:237.70"],"synonyms":[{"name":"Recklinghausen's neurofibromatosis","type":"exact"},{"name":"acoustic neurofibromatosis","type":"exact"},{"name":"central Neurofibromatosis","type":"exact"},{"name":"neurofibromatosis","type":"exact"},{"name":"neurofibromatosis syndrome","type":"exact"},{"name":"neurofibromatosis type 2","type":"narrow"},{"name":"neurofibromatosis type 4","type":"narrow"},{"name":"neurofibromatosis type IV","type":"narrow"},{"name":"peripheral Neurofibromatosis","type":"exact"},{"name":"type IV neurofibromatosis of riccardi","type":"exact"},{"name":"von Reklinghausen disease","type":"exact"}],"termid":"MONDO:0021061","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021061"}}}


id: MONDO:0030841
data:
  {"annotated_genes":["SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86135],"is_not":false,"summary":null,"term":"MONDO:0030841"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair cancer syndrome","termid":"MONDO:0031219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"mismatch repair cancer syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619097","GARD:18363","MEDGEN:1733656","UMLS:C5436807"],"synonyms":[{"name":"MMRCS3","type":"exact"},{"name":"mismatch repair cancer syndrome 3","type":"exact"}],"termid":"MONDO:0030841","terms_by_termid":{"MONDO:0030841":null},"xrefs":{"Monarch":{"xref_id":"0030841"}}}


id: MONDO:0003126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary or cavernous hemangioma arising from the breast.","definition_xrefs":["NCIT:C5353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast hemangioma","secondary_identifiers":["MEDGEN:163122","UMLS:C0853715","DOID:476"],"synonyms":[{"name":"angioma of breast","type":"exact"},{"name":"angioma of the breast","type":"exact"},{"name":"breast angioma","type":"exact"},{"name":"breast hemangioma","type":"exact"},{"name":"hemangioma of breast","type":"exact"},{"name":"hemangioma of the breast","type":"exact"}],"termid":"MONDO:0003126","xrefs":{"Monarch":{"xref_id":"0003126"}}}


id: PR:O74343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridylate synthase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13326:SF0","OMA:SCHPO03082","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase C1A4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.09","secondary_identifiers":["UniProtKB:O74343"],"synonyms":[{"name":"Spom972h-PUS7","type":"exact"}],"termid":"PR:O74343"}


id: MONDO:0000614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete estrogen-receptor negative breast cancer (obsolete MONDO:0000614)","termid":"MONDO:0000614","xrefs":{"Monarch":{"xref_id":"0000614"}}}


id: PBO:0000637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf30","termid":"PBO:0000637"}


id: MONDO:1010634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor X deficiency, non-human animal","termid":"MONDO:1010072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, dog","secondary_identifiers":["OMIA:000362-9615"],"termid":"MONDO:1010634","xrefs":{"Monarch":{"xref_id":"1010634"}}}


id: GO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps3, Hps5, and Hps6 proteins; the mouse complex contains ru2 and ru.","definition_xrefs":["PMID:14718540","PMID:12548288","PMID:15031569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BLOC-2 complex","termid":"GO:0031084"}


id: PATO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented obliquely relative to the long axis of the bearer.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obliquely striated","termid":"PATO:0002479"}


id: GO:0070100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"negatively_regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"negative regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070100"}


id: PBO:0086353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pumilio-homology domain protein; binds the 3' UTR of ASH1 mRNA and represses its translation, resulting in proper asymmetric localization of ASH1 mRNA; required at post-transcriptional step for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; co-sediments with the 60S ribosomal subunit and is required for its biogenesis","termid":"PBO:0086353"}


id: MONDO:0003679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anteroseptal myocardial infarction","secondary_identifiers":["UMLS:C0262565","DOID:5855","MEDGEN:78087","MESH:D056988"],"termid":"MONDO:0003679","xrefs":{"Monarch":{"xref_id":"0003679"}}}


id: GO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the 4,5-ring opening reaction: 3,4-dihydroxyphenylalanine + O2 = 4,5-seco-DOPA. 4,5-seco-DOPA spontaneously recyclizes to form betalamic acid.","definition_xrefs":["PMID:11711071"],"gene_count":0,"genotype_count":0,"name":"obsolete DOPA dioxygenase activity (obsolete GO:0046566)","synonyms":[{"name":"dihydroxyphenylalanine dioxygenase activity","type":"exact"}],"termid":"GO:0046566"}


id: PBO:0084347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1); chromatin assembly by CAF-1 is important for multiple processes including histone H3/H4 tetramerization, silencing at telomeres, mating type loci and rDNA, maintenance of kinetochore structure, deactivation of  DNA damage checkpoint after DNA repair, chromatin dynamics during transcription, and repression of divergent noncoding transcription","termid":"PBO:0084347"}


id: PBO:0074108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC28A3 regulatory antisense RNA 1","termid":"PBO:0074108"}


id: GO:0102339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxyicosanoyl-CoA(4-) + NADP(3-) = 3-oxoicosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-arachidoyl-CoA reductase activity (obsolete GO:0102339)","termid":"GO:0102339"}


id: GO:0030242
data:
  {"annotated_genes":["SJAG_00115","SJAG_03851","SJAG_00114","SJAG_04502","SJAG_01783","SJAG_05017","SJAG_04552","SJAG_04963"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72197,73472,80159,71792,77607,73807,80099,72513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"}]},"cv_name":"biological_process","definition":"The process in which peroxisomes are delivered to a type of vacuole and degraded in response to changing nutrient conditions.","definition_xrefs":["PMID:10547367","PMID:20083110","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00115":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04963":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"autophagy of peroxisome","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peroxisome degradation","type":"broad"},{"name":"peroxisome disassembly","type":"broad"},{"name":"pexophagy","type":"related"}],"termid":"GO:0030242","terms_by_termid":{"GO:0000425":null}}


id: _global:has_effector_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A 'has effector activity' B if A and B are GO molecular functions (GO_0003674),  A 'has component activity' B and B is the effector (output function) of B.  Each compound function has only one effector activity.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_activity","termid":"_global:has_component_activity"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_effector_activity","secondary_identifiers":["RO:0002025"],"termid":"_global:has_effector_activity"}


id: MONDO:0015866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant tumor of fallopian tubes (obsolete MONDO:0015866)","termid":"MONDO:0015866","xrefs":{"Monarch":{"xref_id":"0015866"}}}


id: PBO:0059409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35","termid":"PBO:0059409"}


id: PBO:0082980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic type 2C protein phosphatase (PP2C); identified as a high-copy number suppressor of cnb1 mpk1 synthetic lethality; overexpression decreases high-osmolarity induced Hog1p phosphorylation and kinase activity","termid":"PBO:0082980"}


id: PBO:0086388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cell wall mannoprotein; member of the Srp1p/Tip1p family of serine-alanine-rich proteins; transcription is induced by cold shock and anaerobiosis; TIR2 has a paralog, TIR3, that arose from the whole genome duplication","termid":"PBO:0086388"}


id: PBO:0086265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p","termid":"PBO:0086265"}


id: PBO:0053924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1221","termid":"PBO:0053924"}


id: PR:Q9P7K9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate semialdehyde dehydrogenase [NAD(P)+] Sad that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase-like protein C21C3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.15c","secondary_identifiers":["UniProtKB:Q9P7K9"],"synonyms":[{"name":"Spom972h-sad","type":"exact"}],"termid":"PR:Q9P7K9"}


id: PBO:0081662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 585A","termid":"PBO:0081662"}


id: PR:O74470
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C1739.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.08c","synonyms":[{"name":"Spom972h-SPCC1739.08c","type":"exact"}],"termid":"PR:O74470"}


id: GO:0071806
data:
  {"annotated_genes":["SJAG_00891","SJAG_05950","SJAG_03415","SJAG_04428","SJAG_04218","SJAG_00326","SJAG_00196","SJAG_02619","SJAG_04336","SJAG_01640","SJAG_02208","SJAG_02016","SJAG_00175","SJAG_00959","SJAG_02588","SJAG_03684","SJAG_04014","SJAG_01647","SJAG_02077","SJAG_01560","SJAG_03324","SJAG_05259","SJAG_02330","SJAG_04857","SJAG_04129","SJAG_00064","SJAG_00564","SJAG_01684","SJAG_01597","SJAG_04432","SJAG_03560","SJAG_03502","SJAG_03358","SJAG_01615","SJAG_02354","SJAG_03515","SJAG_00687","SJAG_01442","SJAG_03396","SJAG_03440","SJAG_02797","SJAG_02997","SJAG_02917","SJAG_01120","SJAG_02693","SJAG_04996","SJAG_00373","SJAG_01165","SJAG_02034","SJAG_00702","SJAG_05315","SJAG_01879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57121,61384,66887],"is_not":false,"summary":null,"term":"GO:0071806"},{"annotations":[97463,95385,98816],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[73521,80629,97663,98376,108625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031204"},{"annotations":[77538,77919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[117548,89880,103012,91234,110187,106497,107825,94853,97215,100640,105511,107882,88672,99866,103599,115532,117080,99752,99568,107904,112107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[73722,79903,111699,70378,72300,71075,96804,102582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[62739,74154,70947],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[64250,117608,115603,98898],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[75770,73536,98378,102901,74031,108627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process in which a protein is transported across a membrane.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00196":null,"SJAG_00326":null,"SJAG_00373":null,"SJAG_00564":null,"SJAG_00687":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_00959":null,"SJAG_01120":null,"SJAG_01165":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02917":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03358":null,"SJAG_03396":null,"SJAG_03415":null,"SJAG_03440":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03684":null,"SJAG_04014":null,"SJAG_04129":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04428":null,"SJAG_04432":null,"SJAG_04857":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein membrane transport","type":"exact"}],"termid":"GO:0071806","terms_by_termid":{"GO:0006616":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0030150":null,"GO:0031204":null,"GO:0045041":null,"GO:0071806":null,"GO:0160203":null}}


id: MONDO:0005034
data:
  {"annotated_genes":["SJAG_03453","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86210,87652,87653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterize the thyroid gland papillary carcinoma are absent. Radiation exposure is a risk factor and it comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include thyroid ultrasound and fine needle biopsy.","definition_xrefs":["NCIT:C8054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"thyroid gland adenocarcinoma","termid":"MONDO:0024622"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland follicular carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:255028004","UMLS:C0206682","ICDO:8330/3","NCIT:C27380","EFO:0000501","MESH:D018263","DOID:3962","HP:0006731","MEDGEN:64630","ICDO:8331/3","ONCOTREE:THFO"],"synonyms":[{"name":"carcinoma of thyroid follicle","type":"exact"},{"name":"carcinoma, follicular cell, malignant","type":"exact"},{"name":"follicular adenocarcinoma","type":"narrow"},{"name":"follicular adenocarcinoma (morphologic abnormality)","type":"narrow"},{"name":"follicular adenocarcinoma, well differentiated","type":"narrow"},{"name":"follicular adenocarcinoma, well differentiated (morphologic abnormality)","type":"narrow"},{"name":"follicular cancer of the thyroid","type":"broad"},{"name":"follicular cancer of the thyroid gland","type":"broad"},{"name":"follicular cancer of thyroid","type":"broad"},{"name":"follicular cancer of thyroid gland","type":"broad"},{"name":"follicular carcinoma","type":"exact"},{"name":"follicular carcinoma of the thyroid","type":"exact"},{"name":"follicular carcinoma of the thyroid gland","type":"exact"},{"name":"follicular carcinoma of thyroid","type":"exact"},{"name":"follicular carcinoma of thyroid gland","type":"exact"},{"name":"follicular thyroid cancer","type":"exact"},{"name":"follicular thyroid carcinoma","type":"exact"},{"name":"follicular thyroid gland carcinoma","type":"exact"},{"name":"thyroid follicle carcinoma","type":"exact"},{"name":"thyroid follicular carcinoma","type":"exact"},{"name":"thyroid gland adenocarcinoma","type":"narrow"},{"name":"thyroid gland follicular cancer","type":"broad"},{"name":"thyroid gland follicular carcinoma","type":"exact"},{"name":"well-differentiated follicular adenocarcinoma","type":"exact"},{"name":"well-differentiated follicular carcinoma","type":"broad"}],"termid":"MONDO:0005034","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0005034"}}}


id: GO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + S-adenosyl 3-(methylsulfanyl)propylamine = H+ + N1-(3-aminopropyl)agmatine + S-methyl-5'-thioadenosine.","definition_xrefs":["PMID:15983049","RHEA:36487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"agmatine aminopropyltransferase activity","synonyms":[{"name":"agmatine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043919"}


id: MONDO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sulfatase deficiency (MSD) is a very rare and fatal lysosomal storage disease characterized by a clinical phenotype that combines the features of different sulfatase deficiencies (whether lysosomal or not) that can have neonatal (most severe), infantile (most common) and juvenile (rare) presentations with manifestations including hypotonia, coarse facial features, mild deafness, skeletal anomalies, ichthyosis, hepatomegaly, developmental delay, progressive neurologic deterioration and hydrocephalus.","definition_xrefs":["Orphanet:585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"mucosulfatidosis","secondary_identifiers":["GARD:5061","MEDGEN:75664","NANDO:1200083","NANDO:2200566","SCTID:54898003","UMLS:C0268263","MESH:D052517","NORD:1471","icd11.foundation:848083807","DOID:0050441","NANDO:1200624","NCIT:C84908","OMIM:272200"],"synonyms":[{"name":"MSD","type":"exact"},{"name":"Multiple Sulfatase Deficiency","type":"exact"},{"name":"juvenile sulfatidosis","type":"related"},{"name":"juvenile sulfatidosis, Austin type","type":"exact"},{"name":"mucosulfatidosis","type":"exact"},{"name":"multiple sulfatase deficiency","type":"related"},{"name":"multiple sulfatase deficiency disease","type":"exact"},{"name":"sulfatidosis juvenile, Austin type","type":"related"},{"name":"sulfatidosis, juvenile, Austin type","type":"exact"}],"termid":"MONDO:0010088","xrefs":{"Monarch":{"xref_id":"0010088"}}}


id: PBO:0058212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4504","termid":"PBO:0058212"}


id: MONDO:0957791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with motor regression, progressive spastic paraplegia, and oromotor dysfunction","secondary_identifiers":["OMIM:620515","MEDGEN:1846192","UMLS:C5882695"],"termid":"MONDO:0957791","xrefs":{"Monarch":{"xref_id":"0957791"}}}


id: MONDO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneal stromal dystrophy (obsolete MONDO:0000765)","termid":"MONDO:0000765","xrefs":{"Monarch":{"xref_id":"0000765"}}}


id: PBO:0066366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 10","termid":"PBO:0066366"}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: MONDO:0032703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, amelogenesis imperfecta, and skeletal dysplasia with scoliosis","secondary_identifiers":["OMIM:618363","UMLS:C5193055","MEDGEN:1676818"],"synonyms":[{"name":"SHORT STATURE, AMELOGENESIS IMPERFECTA, AND SKELETAL DYSPLASIA WITH SCOLIOSIS","type":"related"},{"name":"SSASKS","type":"related"}],"termid":"MONDO:0032703","xrefs":{"Monarch":{"xref_id":"0032703"}}}


id: GO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal programmed cell death","type":"exact"},{"name":"down-regulation of retinal programmed cell death","type":"exact"},{"name":"downregulation of retinal programmed cell death","type":"exact"},{"name":"inhibition of retinal programmed cell death","type":"narrow"},{"name":"negative regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046671"}


id: PBO:0030678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_shape","termid":"PBO:0030678"}


id: MONDO:0023031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis acral with facial and genital abnormalities (obsolete MONDO:0023031)","termid":"MONDO:0023031","xrefs":{"Monarch":{"xref_id":"0023031"}}}


id: FYPO:0000301
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119729,119732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000760"},{"annotations":[119780,119570,119787,119791,119797,119812,119796,119794,119786,119810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000280"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype that affects conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process 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id: PBO:0025521
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae KIN28","termid":"PBO:0025521"}


id: MONDO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parainfluenza virus type 3 is one of a group of common viruses known as human parainfluenza viruses (HPIV) that cause a variety of respiratory illnesses. Symptoms usually develop between 2 and 7 days from the time of exposure and typically resolve in 7-10 days. Symptoms may include fever, runny nose, and cough. HPIV-3 can also cause bronchiolitis, bronchitis, and pneumonia. Infants and young children are particularly susceptible to HPIV-3 infections, though older adults and those with a weakened immune system are also at risk for complications. HPIVs are usually spread from an infected person to others through coughing, sneezing, and/or touching. There is currently no vaccine to protect against parainfluenza virus infections. Most HPIV infections resolve on their own and do not require special treatment, though medical intervention may be necessary for severe breathing problems. Most adults have antibodies against parainfluenza but can get repeat infections.","definition_xrefs":["GARD:0004215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirovirus infectious disease","termid":"MONDO:0005940"},{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 3 infectious disease","secondary_identifiers":["ICD9:079.89","SCTID:30270006","GARD:4215","UMLS:C0276324","MEDGEN:547264"],"synonyms":[{"name":"PIV3","type":"related"},{"name":"human parainfluenza virus type 3","type":"related"},{"name":"human respirovirus 3 caused disease or disorder","type":"exact"},{"name":"human respirovirus 3 disease or disorder","type":"exact"},{"name":"human respirovirus 3 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 3","type":"related"},{"name":"infection caused by parainfluenza virus 3","type":"related"},{"name":"infection due to human parainfluenza virus 3","type":"exact"},{"name":"infection due to parainfluenza virus 3","type":"related"}],"termid":"MONDO:0042974","xrefs":{"Monarch":{"xref_id":"0042974"}}}


id: MONDO:0020481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonia fluctuans (MF) is a form of potassium-aggravated myotonia (PAM) which is cold insensitive, dramatically fluctuating and profoundly worsened by potassium ingestion.","definition_xrefs":["Orphanet:99734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium-aggravated myotonia","termid":"MONDO:0018959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonia fluctuans","secondary_identifiers":["UMLS:C0752355","icd11.foundation:1294270721","MEDGEN:156269","NCIT:C122789","SCTID:715788001","GARD:16904"],"synonyms":[{"name":"Fluctuating myotonia","type":"exact"},{"name":"MF","type":"exact"},{"name":"exercise-induced delayed-onset myotonia","type":"exact"}],"termid":"MONDO:0020481","xrefs":{"Monarch":{"xref_id":"0020481"}}}


id: PR:O94653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BMS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12858:SF2","PRO:DNx","OMA:SCHPO02379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein bms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.06","secondary_identifiers":["UniProtKB:O94653"],"synonyms":[{"name":"Spom972h-BMS1","type":"exact"}],"termid":"PR:O94653"}


id: GO:1990410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular adrenomedullin combining with a dimeric adrenomedullin receptor on the surface of the target cell.","definition_xrefs":["PMID:10882736","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adrenomedullin receptor signaling pathway","synonyms":[{"name":"AM receptor signaling pathway","type":"exact"}],"termid":"GO:1990410"}


id: PBO:0089889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase, anaerobic","termid":"PBO:0089889"}


id: GO:0062196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a lysosome.","definition_xrefs":["PMID:31314175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lysosome size","termid":"GO:0062196"}


id: PBO:0065960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23B pseudogene 2","termid":"PBO:0065960"}


id: MONDO:0020613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--lke (obsolete MONDO:0020613)","secondary_identifiers":["OMIM:111130"],"synonyms":[{"name":"BLOOD GROUP--LKE","type":"related"},{"name":"Blood Group--Luke","type":"related"},{"name":"Blood Group--Luke, Formerly","type":"related"},{"name":"LKE","type":"related"}],"termid":"MONDO:0020613","xrefs":{"Monarch":{"xref_id":"0020613"}}}


id: PBO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt3","termid":"PBO:0005105"}


id: PBO:0011464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase, implicated in ribosome biogenesis (predicted)","termid":"PBO:0011464"}


id: FYPO:0000429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G0 to G1 transition begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G0 to G1 transition","termid":"FYPO:0002955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"delayed G0 to G1 transition","synonyms":[{"name":"delayed G0/G1 transition","type":"exact"},{"name":"delayed exit from G0","type":"exact"},{"name":"delayed exit from cell quiescence","type":"exact"},{"name":"slow cell population growth following nitrogen starvation","type":"related"}],"termid":"FYPO:0000429"}


id: FYPO:0007118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during cellular response to leucine starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"increased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"increased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"increased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during leucine starvation","type":"exact"},{"name":"increased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"increased transcript level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007118"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: PBO:0078281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 14-1","termid":"PBO:0078281"}


id: MONDO:0007865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knuckle pads","secondary_identifiers":["icd11.foundation:1824875472","UMLS:C0264000","ICD10CM:M72.1","MEDGEN:78103","OMIM:149100","ICD9:728.79","SCTID:16687001"],"synonyms":[{"name":"knuckle pads","type":"exact"}],"termid":"MONDO:0007865","xrefs":{"Monarch":{"xref_id":"0007865"}}}


id: FYPO:0008135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during G1/S ofinterphase.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during interphase","termid":"FYPO:0002821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization tomitotic spindle pole body during G1/S","termid":"FYPO:0008135"}


id: PBO:0030624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_maltase_activity","termid":"PBO:0030624"}


id: PBO:0058969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKX antisense RNA 1","termid":"PBO:0058969"}


id: PBO:0081066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DBF-type containing 2","termid":"PBO:0081066"}


id: PBO:0004891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor, nucleoporin Rae1","termid":"PBO:0004891"}


id: MONDO:0014396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the RAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1NN","secondary_identifiers":["OMIM:615916","UMLS:C4014656","DOID:0110432","GARD:16031","MEDGEN:863093"],"synonyms":[{"name":"CMD1NN","type":"exact"},{"name":"RAF1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1NN","type":"related"},{"name":"cardiomyopathy, dilated, type 1Nn","type":"exact"},{"name":"dilated cardiomyopathy type 1NN","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in RAF1","type":"exact"}],"termid":"MONDO:0014396","xrefs":{"Monarch":{"xref_id":"0014396"}}}


id: PBO:0061039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA magnesium transporter 2","termid":"PBO:0061039"}


id: PBO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae VHT1","termid":"PBO:0015668"}


id: MOD:00139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-succinyl-L-tryptophan.","definition_xrefs":["PubMed:11857757","PubMed:8471040","RESID:AA0130","Unimod:64#N-term","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-succinyl-L-tryptophan","synonyms":[{"name":"(2S)-2-(3-carboxypropanoyl)amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"(2S)-2-amino-(6,7-dihydro-6,7-dioxo-1H-indole)-3-propanoic acid","type":"exact"},{"name":"MOD_RES N2-succinyltryptophan","type":"exact"},{"name":"N2-succinyl-L-tryptophan","type":"exact"},{"name":"Succinic anhydride labeling reagent light form (N-term)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:00139"}


id: GO:0031938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that affects the rate, extent or location of chromatin silencing at telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin silencing at telomere (obsolete GO:0031938)","synonyms":[{"name":"regulation of heterochromatic silencing at telomere","type":"exact"}],"termid":"GO:0031938"}


id: PBO:0028896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_maintenance","termid":"PBO:0028896"}


id: PBO:0043821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coproporphyrinogen oxidase","termid":"PBO:0043821"}


id: GO:0019645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors other than oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:mtg_electron_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic electron transport chain","termid":"GO:0019645"}


id: PBO:0004346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein (predicted)","termid":"PBO:0004346"}


id: PBO:0057240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 431","termid":"PBO:0057240"}


id: PR:Q9USI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.15 gene.","definition_xrefs":["UniProtKB:Q9USI0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.15","synonyms":[{"name":"Spom972h-SPCC794.15","type":"exact"}],"termid":"PR:Q9USI0"}


id: MONDO:1011797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy of the diaphragmatic muscles, non-human animal","secondary_identifiers":["OMIA:001319"],"termid":"MONDO:1011797","xrefs":{"Monarch":{"xref_id":"1011797"}}}


id: PBO:0049178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREB1 like retinoic acid receptor coactivator","termid":"PBO:0049178"}


id: PR:O14214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA methyltransferase 10 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13563:SF6","PRO:DNx","OMA:SCHPO01012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(9)-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.09","secondary_identifiers":["UniProtKB:O14214"],"synonyms":[{"name":"Spom972h-TRMT10A","type":"exact"},{"name":"tRNA methyltransferase 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)MTase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14214"}


id: PBO:0089554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12/MIND complex Mis13/Dsn1","termid":"PBO:0089554"}


id: FYPO:0006454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle","termid":"FYPO:0007863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to meiotic spindle","synonyms":[{"name":"abnormal protein localisation to meiotic spindle","type":"exact"},{"name":"abnormal protein localization to spindle during meiosis","type":"exact"}],"termid":"FYPO:0006454"}


id: PBO:0049074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89 pseudogene","termid":"PBO:0049074"}


id: PBO:0089338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase subunit Gem1","termid":"PBO:0089338"}


id: PBO:0056046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTO1 pseudogene 1","termid":"PBO:0056046"}


id: GO:0071391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to estrogen","termid":"GO:0043627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estrogen stimulus","synonyms":[{"name":"cellular response to 17alpha-ethynylestradiol","type":"related"},{"name":"cellular response to oestrogen stimulus","type":"exact"}],"termid":"GO:0071391"}


id: PBO:0060030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 18","termid":"PBO:0060030"}


id: PBO:0047790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box E1","termid":"PBO:0047790"}


id: PBO:0078937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 5-1","termid":"PBO:0078937"}


id: FYPO:0000824
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119837,119839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[119840,119838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[119824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[119825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"output_of","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"altered RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: abnormal","type":"related"},{"name":"abnormal RNA level","type":"exact"},{"name":"altered cellular RNA level","type":"exact"},{"name":"altered cellular mRNA level","type":"narrow"},{"name":"altered transcript level","type":"exact"}],"termid":"FYPO:0000824","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: MONDO:0033369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 60","secondary_identifiers":["UMLS:C4693663","MEDGEN:1638894","GARD:16270","OMIM:617929","DOID:0080432"],"synonyms":[{"name":"DEE60","type":"exact"},{"name":"EIEE60","type":"exact"},{"name":"developmental and epileptic encephalopathy 60","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 60","type":"exact"}],"termid":"MONDO:0033369","xrefs":{"Monarch":{"xref_id":"0033369"}}}


id: MONDO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"immunoskeletal dysplasia with neurodevelopmental abnormalities","secondary_identifiers":["UMLS:C4479452","MEDGEN:1381460","OMIM:617425"],"synonyms":[{"name":"IMMUNOSKELETAL dysplasia with neurodevelopmental abnormalities","type":"related"},{"name":"ISDNA","type":"related"}],"termid":"MONDO:0044312","xrefs":{"Monarch":{"xref_id":"0044312"}}}


id: GO:1901386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated calcium channel","type":"broad"},{"name":"downregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"downregulation of voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated calcium channel","type":"broad"},{"name":"inhibition of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"inhibition of voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of voltage-gated calcium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated calcium ion channel activity","type":"exact"},{"name":"inhibition of voltage-sensitive calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated calcium channel","type":"broad"},{"name":"negative regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"negative regulation of voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901386"}


id: PBO:0000648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein","termid":"PBO:0000648"}


id: PBO:0069966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1261, pseudogene","termid":"PBO:0069966"}


id: PBO:0088592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein-associated transcription initiation factor Mot1","termid":"PBO:0088592"}


id: GO:0051232
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101755],"is_not":false,"summary":null,"term":"GO:0051232"}]},"cv_name":"biological_process","definition":"The lengthening of the distance between poles of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle elongation","termid":"GO:0051231"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle elongation during meiosis","type":"exact"}],"termid":"GO:0051232","terms_by_termid":{"GO:0051232":null}}


id: MONDO:0011974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosain which the cause of the disease is a variation in the RDS gene (PRPH2). A digenic form of retinitis pigmentosa, resulting from a mutation in the RDS gene and a null mutation of the ROM1 gene, has also been reported.","definition_xrefs":["OMIM:608133","DOID:0110383","PMID:1749427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PRPH2-related retinopathy","termid":"MONDO:1040055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 7","secondary_identifiers":["MEDGEN:334168","GARD:10386","UMLS:C1842475","ICD10CM:H35.5"],"synonyms":[{"name":"Leber congenital amaurosis 18","type":"related"},{"name":"RP 7","type":"related"},{"name":"RP7","type":"exact"},{"name":"retinitis pigmentosa 7","type":"exact"},{"name":"retinitis pigmentosa 7, digenic","type":"related"},{"name":"retinitis pigmentosa 7, digenic form, autosomal recessive, autosomal dominant, digenic dominant","type":"narrow"},{"name":"retinitis pigmentosa type 7","type":"exact"}],"termid":"MONDO:0011974","xrefs":{"Monarch":{"xref_id":"0011974"}}}


id: GO:0052063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the production of nitric oxide as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host nitric oxide production (obsolete GO:0052063)","synonyms":[{"name":"activation by organism of defense-related host NO production","type":"exact"},{"name":"activation by organism of defense-related host nitric oxide production","type":"exact"},{"name":"activation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"induction by organism of defense-related host NO production","type":"exact"},{"name":"induction by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"related"},{"name":"positive regulation by organism of defense-related host NO production","type":"related"},{"name":"positive regulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"stimulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"up regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"up-regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"upregulation by symbiont of defense-related host nitric oxide production","type":"related"}],"termid":"GO:0052063"}


id: PBO:0070905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 13","termid":"PBO:0070905"}


id: GO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8Z,11Z,14Z)-eicosatrienoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (8Z,11Z,14Z,17Z)-eicosatetraenoyl-CoA) and add a fourth double bond (a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-CoA).","definition_xrefs":["PMID:10601301","PMID:10769175","RHEA:46424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA delta5-desaturase activity","secondary_identifiers":["EC:1.14.19.44"],"synonyms":[{"name":"acyl-CoA (8-3)-desaturase","type":"exact"},{"name":"acyl-CoA D5-desaturase activity","type":"exact"},{"name":"acyl-CoA delta(5)-desaturase activity","type":"exact"}],"termid":"GO:0062076"}


id: MONDO:1012328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous and renal vasculopathy, non-human animal","termid":"MONDO:1011744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous and renal vasculopathy, dog","secondary_identifiers":["OMIA:001220-9615"],"termid":"MONDO:1012328","xrefs":{"Monarch":{"xref_id":"1012328"}}}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: PBO:0091857
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PFDN5","termid":"PBO:0091857"}


id: GO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + UDP-galactose = 6F-alpha-D-galactosylsucrose + UDP.","definition_xrefs":["EC:2.4.1.167","MetaCyc:2.4.1.167-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"sucrose 6F-alpha-galactotransferase activity","secondary_identifiers":["RHEA:10088"],"synonyms":[{"name":"UDP-galactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6fru-alpha-galactosyltransferase activity","type":"related"},{"name":"sucrose 6(F)-alpha-galactosyltransferase activity","type":"exact"},{"name":"sucrose 6F-alpha-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-sucrose 6F-alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047235"}


id: PBO:0057978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3713","termid":"PBO:0057978"}


id: GO:0070534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a protein. K63-linked ubiquitination does not target the substrate protein for degradation, but is involved in several pathways, notably as a signal to promote error-free DNA postreplication repair.","definition_xrefs":["PMID:15556404","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K63-linked ubiquitination","synonyms":[{"name":"protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:0070534"}


id: GO:0070884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-mediated signaling","termid":"GO:0106056"},{"relation_name":"regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051532","GO:0051531"],"synonyms":[{"name":"NFAT protein import into nucleus","type":"narrow"},{"name":"regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"regulation of calcineurin-NFAT signalling cascade","type":"exact"}],"termid":"GO:0070884"}


id: GO:0031936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing (obsolete GO:0031936)","synonyms":[{"name":"down regulation of chromatin silencing","type":"exact"},{"name":"down-regulation of chromatin silencing","type":"exact"},{"name":"downregulation of chromatin silencing","type":"exact"},{"name":"inhibition of chromatin silencing","type":"narrow"},{"name":"loss of chromatin silencing","type":"exact"},{"name":"negative regulation of heterochromatic silencing","type":"exact"}],"termid":"GO:0031936"}


id: SO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_cyano_7_deazaguanosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_cyano_seven_deazaguanosine","secondary_identifiers":["RNAMOD:047"],"synonyms":[{"name":"7-cyano-7-deazaguanosine","type":"exact"},{"name":"preQ0","type":"exact"},{"name":"seven cyano seven deazaguanosine","type":"exact"}],"termid":"SO:0001321"}


id: GO:1901270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipooligosaccharide.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide catabolic process","synonyms":[{"name":"lipooligosaccharide breakdown","type":"exact"},{"name":"lipooligosaccharide catabolism","type":"exact"},{"name":"lipooligosaccharide degradation","type":"exact"}],"termid":"GO:1901270"}


id: FYPO:0007237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency at which two double-strand breaks (DSBs) form close to each other during meiosis I is increased.","definition_xrefs":["PMID:30217891","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased meiotic DNA double-strand break formation near existing double-strand break","synonyms":[{"name":"decreased DSB interference","type":"exact"},{"name":"decreased distance between meiotic DSBs","type":"exact"}],"termid":"FYPO:0007237"}


id: FYPO:0005800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane is abnormal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein movement within plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein movement within plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005800"}


id: GO:2000834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of androgen secretion","termid":"GO:2000834"}


id: PBO:0029690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxygen_consumption_during_vegetative_growth","termid":"PBO:0029690"}


id: MONDO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypotrichosis that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eyelid degenerative disorder","termid":"MONDO:0000941"},{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypotrichosis of eyelid","secondary_identifiers":["ICD9:374.55","SCTID:70738004","DOID:11671","MEDGEN:509854","UMLS:C0155214"],"synonyms":[{"name":"eyelid hypotrichosis","type":"exact"}],"termid":"MONDO:0001335","xrefs":{"Monarch":{"xref_id":"0001335"}}}


id: PBO:0088522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd4","termid":"PBO:0088522"}


id: PR:O42932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit 6, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15336:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.08c","secondary_identifiers":["UniProtKB:O42932"],"synonyms":[{"name":"SPBC16C6.08c","type":"related"},{"name":"Spom972h-UQCRH","type":"exact"},{"name":"complex III subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitochondrial hinge protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42932"}


id: MONDO:0004088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive variant of cervical squamous cell carcinoma characterized by the presence of nests of malignant basaloid squamous cells with scant amount of cytoplasm.","definition_xrefs":["NCIT:C40189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical basaloid carcinoma","secondary_identifiers":["UMLS:C1511063","DOID:7046","MEDGEN:267027"],"synonyms":[{"name":"cervical basaloid carcinoma","type":"exact"},{"name":"cervical basaloid squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004088","xrefs":{"Monarch":{"xref_id":"0004088"}}}


id: GO:0030692
data:
  {"annotated_genes":["SJAG_03654","SJAG_00838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73052,79007],"is_not":false,"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with precursors of the eukaryotic small ribosomal subunit, including the 90S preribosome; involved in small subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"},{"relation_name":"part_of","term_name":"preribosome, small subunit precursor","termid":"GO:0030688"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00838":null,"SJAG_03654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0030684","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Noc4p-Nop14p complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Nop7 complex","type":"exact"},{"name":"Nop7 subcomplex","type":"exact"}],"termid":"GO:0030692","terms_by_termid":{"GO:0030692":null}}


id: PBO:0027598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_division_site","termid":"PBO:0027598"}


id: PBO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr3 (predicted)","termid":"PBO:0000487"}


id: GO:0005902
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microvillus","secondary_identifiers":["NIF_Subcellular:sao671419673","Wikipedia:Microvillus"],"synonyms":[{"name":"microvilli","type":"related"}],"termid":"GO:0005902"}


id: GO:0047201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1-O-galloyl-beta-D-glucose = 1,6-bis-O-galloyl-beta-D-glucose + D-glucose.","definition_xrefs":["RHEA:11416","EC:2.3.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-glucogallin O-galloyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00049","MetaCyc:2.3.1.90-RXN"],"synonyms":[{"name":"1-O-galloyl-beta-D-glucose:1-O-galloyl-beta-D-glucose O-galloyltransferase activity","type":"related"}],"termid":"GO:0047201"}


id: GO:0097656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell-cell recognition process by which a cell distinguishes between self and non self during cooperative behavior, such as early development.","definition_xrefs":["GOC:pf","PMID:23910661","PMID:21700835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell self recognition","synonyms":[{"name":"kin discrimination","type":"related"},{"name":"kin recognition","type":"broad"},{"name":"self recognition","type":"broad"}],"termid":"GO:0097656"}


id: PBO:0088414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF complex, Cul4-RING and CLRC ubiquitin ligase ligase E3 subunit Rbx1","termid":"PBO:0088414"}


id: PBO:0064345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A3","termid":"PBO:0064345"}


id: PBO:0029694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lobate_nuclear_envelope","termid":"PBO:0029694"}


id: PBO:0028828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization_to_chromatin","termid":"PBO:0028828"}


id: PBO:0073160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61G pseudogene 1","termid":"PBO:0073160"}


id: GO:0006856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of eye pigment precursors, the inactive forms of visual pigments, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"eye pigment precursor transport","termid":"GO:0006856"}


id: GO:0047341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-L-fucose 1-phosphate + GTP + H+ = diphosphate + GDP-beta-L-fucose.","definition_xrefs":["RHEA:13549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.30","MetaCyc:2.7.7.30-RXN","KEGG_REACTION:R01951","Reactome:R-HSA-6787533"],"synonyms":[{"name":"GDP fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-L-fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-fucose diphosphorylase activity","type":"related"},{"name":"GDP-fucose pyrophosphorylase activity","type":"related"},{"name":"GTP:L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:beta-L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:fucose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"guanosine diphosphate L-fucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047341"}


id: PBO:0063729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 2 pseudogene 1","termid":"PBO:0063729"}


id: PBO:0084018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylated integral ER membrane protein of unknown function; forms an ER-membrane associated protein complex with Emp65p; member of the SUN-like family of proteins; genetic interactions suggest a role in folding of ER membrane proteins; required for nuclear envelope localization of Mps3p","termid":"PBO:0084018"}


id: MONDO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tetanus (obsolete MONDO:0018012)","termid":"MONDO:0018012","xrefs":{"Monarch":{"xref_id":"0018012"}}}


id: PBO:0031815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_autophagy","termid":"PBO:0031815"}


id: PBO:0057980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3907","termid":"PBO:0057980"}


id: PBO:0090655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase","termid":"PBO:0090655"}


id: MONDO:0100403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly loss of chromosome 17p. (A cytogenetic abnormality that refers to the loss of all or part of the short arm of chromosome 17 (17p).)","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, loss of chromosome 17p","synonyms":[{"name":"AML, del(17p)","type":"exact"},{"name":"AML, loss of chromosome 17p","type":"exact"}],"termid":"MONDO:0100403","xrefs":{"Monarch":{"xref_id":"0100403"}}}


id: MONDO:0007007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus ureaplasma.","definition_xrefs":["MESH:D016869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethritis","termid":"MONDO:0005297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ureaplasma urethritis","secondary_identifiers":["EFO:1001225","MEDGEN:1843394","SCTID:51105006","UMLS:C0854510"],"synonyms":[{"name":"Ureaplasma caused disease or disorder","type":"exact"},{"name":"Ureaplasma disease or disorder","type":"exact"},{"name":"Ureaplasma infection","type":"related"},{"name":"Ureaplasma infectious disease","type":"exact"},{"name":"infection, Ureaplasma","type":"related"},{"name":"infections, Ureaplasma","type":"related"}],"termid":"MONDO:0007007","xrefs":{"Monarch":{"xref_id":"0007007"}}}


id: GO:0070105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-6-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-6-mediated signaling pathway","termid":"GO:0070103"},{"relation_name":"positively_regulates","term_name":"interleukin-6-mediated signaling pathway","termid":"GO:0070102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-6-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-6-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-6-mediated signalling pathway","type":"exact"}],"termid":"GO:0070105"}


id: GO:0032825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell activation","termid":"GO:0032816"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"positively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell differentiation","synonyms":[{"name":"activation of natural killer cell differentiation","type":"narrow"},{"name":"positive regulation of NK cell differentiation","type":"exact"},{"name":"positive regulation of natural killer cell development","type":"related"},{"name":"stimulation of natural killer cell differentiation","type":"narrow"},{"name":"up regulation of natural killer cell differentiation","type":"exact"},{"name":"up-regulation of natural killer cell differentiation","type":"exact"},{"name":"upregulation of natural killer cell differentiation","type":"exact"}],"termid":"GO:0032825"}


id: GO:0018323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfinic acid.","definition_xrefs":["RESID:AA0262"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-cysteine sulfinic acid (obsolete GO:0018323)","synonyms":[{"name":"enzyme active site formation via L-cysteine sulphinic acid","type":"exact"}],"termid":"GO:0018323"}


id: PBO:0078970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 2-1","termid":"PBO:0078970"}


id: PBO:0085222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase; catalyzes the first committed step in the universal biosynthetic pathway for synthesis of coenzyme A (CoA); transcriptionally regulated by Upc2p via a sterol response element","termid":"PBO:0085222"}


id: GO:0034761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of iron ion transport","termid":"GO:0034758"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of iron ion transmembrane transport","synonyms":[{"name":"activation of transmembrane iron ion transport","type":"narrow"},{"name":"positive regulation of iron ion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane iron ion transport","type":"exact"},{"name":"positive regulation of transmembrane iron transport","type":"exact"},{"name":"stimulation of transmembrane iron ion transport","type":"narrow"},{"name":"up regulation of transmembrane iron ion transport","type":"exact"},{"name":"up-regulation of transmembrane iron ion transport","type":"exact"},{"name":"upregulation of transmembrane iron ion transport","type":"exact"}],"termid":"GO:0034761"}


id: MOD:01764
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01764"}


id: PBO:0073149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog B, COPII coat complex component","termid":"PBO:0073149"}


id: GO:1904193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["PMID:24498161","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte apoptotic process","synonyms":[{"name":"down regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"down-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"downregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"downregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"downregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"downregulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"inhibition of cholangiocyte apoptosis","type":"narrow"},{"name":"inhibition of cholangiocyte apoptotic process","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"negative regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904193"}


id: FYPO:0003921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased replication fork arrest at rDNA repeats","synonyms":[{"name":"increased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"increased replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003921"}


id: PBO:0049044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 35","termid":"PBO:0049044"}


id: GO:0019974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to interleukin-14.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 binding (obsolete GO:0019974)","synonyms":[{"name":"IL-14 binding","type":"exact"}],"termid":"GO:0019974"}


id: GO:0034722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a gamma-linked glutamate bond.","definition_xrefs":["MEROPS_fam:C26","EC:3.4.19.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"gamma-glutamyl-peptidase activity","synonyms":[{"name":"gamma-glutamyl hydrolase activity","type":"related"}],"termid":"GO:0034722"}


id: PBO:0066484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFPL1 antisense RNA 1","termid":"PBO:0066484"}


id: PBO:0031913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic26/27 (predicted)","termid":"PBO:0031913"}


id: PBO:0068040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 345","termid":"PBO:0068040"}


id: MONDO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cockayne syndrome A (obsolete MONDO:0008997)","termid":"MONDO:0008997","xrefs":{"Monarch":{"xref_id":"0008997"}}}


id: GO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a monooxygenase reaction in which oxygen is incorporated into limonene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"limonene monooxygenase activity","termid":"GO:0019113"}


id: GO:0018678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NADPH + H+ + O2 = hydroquinone + NADP+ + H2O + CO2.","definition_xrefs":["EC:1.14.13.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxybenzoate 1-hydroxylase activity","secondary_identifiers":["UM-BBD_reactionID:r0752","MetaCyc:1.14.13.64-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 1-monooxygenase activity","type":"exact"},{"name":"4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (1-hydroxylating, decarboxylating)","type":"related"}],"termid":"GO:0018678"}


id: PBO:0090469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit F","termid":"PBO:0090469"}


id: GO:0106070
data:
  {"annotated_genes":["SJAG_01245","SJAG_02481","SJAG_00266","SJAG_02426","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100762,108284,116682,92426,93091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenylate cyclase-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:hjd","PMID:19246489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of adenylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0106070","terms_by_termid":{"GO:0110034":null}}


id: MONDO:0017502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acheiria","termid":"MONDO:0017445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiria, unilateral","secondary_identifiers":["Orphanet:295101","icd11.foundation:1906312110"],"synonyms":[{"name":"congenital absence of hand, unilateral","type":"exact"}],"termid":"MONDO:0017502","xrefs":{"Monarch":{"xref_id":"0017502"}}}


id: PR:O13997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein IMPACT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16301:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein IMPACT homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.02","secondary_identifiers":["UniProtKB:O13997"],"synonyms":[{"name":"SPAC27E2.02","type":"related"},{"name":"Spom972h-IMPACT","type":"exact"}],"termid":"PR:O13997"}


id: PBO:0085449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to bacterial Hsp31 and yeast Hsp31p, Hsp32p, and Hsp33p; DJ-1/ThiJ/PfpI superfamily member; predicted involvement in pyridoxine metabolism; induced by mild heat stress and copper deprivation","termid":"PBO:0085449"}


id: GO:1903862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative phosphorylation.","definition_xrefs":["GOC:TermGenie","PMID:10225962","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative phosphorylation","synonyms":[{"name":"activation of oxidative phosphorylation","type":"narrow"},{"name":"activation of respiratory-chain phosphorylation","type":"narrow"},{"name":"positive regulation of respiratory-chain phosphorylation","type":"exact"},{"name":"up regulation of oxidative phosphorylation","type":"exact"},{"name":"up regulation of respiratory-chain phosphorylation","type":"exact"},{"name":"up-regulation of oxidative phosphorylation","type":"exact"},{"name":"up-regulation of respiratory-chain phosphorylation","type":"exact"},{"name":"upregulation of oxidative phosphorylation","type":"exact"},{"name":"upregulation of respiratory-chain phosphorylation","type":"exact"}],"termid":"GO:1903862"}


id: PBO:0003432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type I","termid":"PBO:0003432"}


id: PBO:0077433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM167B divergent transcript","termid":"PBO:0077433"}


id: GO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: substrate + ATP = substrate-AMP + diphosphate.","definition_xrefs":["PMID:12084835"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate forming enzyme activity (obsolete GO:0009984)","synonyms":[{"name":"adenylate forming enzyme activity","type":"exact"}],"termid":"GO:0009984"}


id: GO:0060791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a sebaceous gland placode forms. A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland placode formation","termid":"GO:0060791"}


id: MONDO:0021455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the neck.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"neoplasm of neck","termid":"MONDO:0021351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of neck","secondary_identifiers":["UMLS:C0684815","NCIT:C4884","SCTID:92246000","MEDGEN:195775","ICD9:229.8"],"synonyms":[{"name":"benign neck neoplasm","type":"exact"},{"name":"benign neck tumor","type":"exact"},{"name":"benign neck tumour","type":"exact"},{"name":"benign neoplasm of the neck","type":"exact"},{"name":"benign tumor of neck","type":"exact"},{"name":"benign tumor of the neck","type":"exact"},{"name":"benign tumour of neck","type":"exact"},{"name":"benign tumour of the neck","type":"exact"},{"name":"neck benign neoplasm","type":"exact"}],"termid":"MONDO:0021455","xrefs":{"Monarch":{"xref_id":"0021455"}}}


id: PBO:0083366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF DIC1/YLR348C","termid":"PBO:0083366"}


id: PBO:0043236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 7","termid":"PBO:0043236"}


id: PBO:0015252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0015252"}


id: GO:1990780
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The leaflet of the plasma membrane that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface surrounding a dendritic spine.","definition_xrefs":["PMID:9275233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"},{"relation_name":"part_of","term_name":"dendritic spine membrane","termid":"GO:0032591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytoplasmic side of dendritic spine plasma membrane","termid":"GO:1990780"}


id: MONDO:0024659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Kaposi sarcoma that arises from the colon or rectum.","definition_xrefs":["NCIT:C96510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kaposi's sarcoma","termid":"MONDO:0005055"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal Kaposi sarcoma","secondary_identifiers":["MEDGEN:474466","UMLS:C3272833"],"synonyms":[{"name":"Kaposi's sarcoma (disease) of large intestine","type":"exact"},{"name":"colorectal Kaposi sarcoma","type":"exact"},{"name":"large intestinal Kaposi sarcoma","type":"exact"},{"name":"large intestine Kaposi's sarcoma (disease)","type":"exact"}],"termid":"MONDO:0024659","xrefs":{"Monarch":{"xref_id":"0024659"}}}


id: PBO:0026893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026893"}


id: MONDO:0007764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerozing bone disorder characterized by generalized skeletal densification, particularly of the cranial vault and tubular long bones, which is not associated to an increased risk of fracture.","definition_xrefs":["Orphanet:2790"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant osteosclerosis, Worth type","secondary_identifiers":["OMIM:607636","icd11.foundation:1038854228","SCTID:254131007","OMIM:144750","GARD:390","UMLS:C0432273","DOID:0080037","MEDGEN:140932"],"synonyms":[{"name":"Ostéosclérose autosomique dominante type Worth","type":"exact"},{"name":"VBCH2","type":"related"},{"name":"Van Buchem disease type 2","type":"related"},{"name":"Van Buchem disease, type 2","type":"related"},{"name":"Worth syndrome","type":"exact"},{"name":"Worth's syndrome","type":"exact"},{"name":"autosomal dominant endosteal hyperostosis","type":"exact"},{"name":"autosomal dominant osteosclerosis","type":"exact"},{"name":"benign form of Worth hyperostosis corticalis generalisata with torus platinus","type":"exact"},{"name":"endosteal hyperostosis, Worth type","type":"exact"},{"name":"endosteal hyperostosis, autosomal dominant","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth with torus palatinus","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth, with torus palatinus","type":"related"},{"name":"hyperostosis, endosteal","type":"exact"},{"name":"osteosclerosis of the skull and enlarged mandible","type":"related"},{"name":"osteosclerosis, autosomal dominant","type":"related"},{"name":"osteosclerosis, autosomal dominant, Worth type","type":"related"}],"termid":"MONDO:0007764","xrefs":{"Monarch":{"xref_id":"0007764"}}}


id: GO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete effector caspase activity (obsolete GO:0004207)","synonyms":[{"name":"effector caspase activity","type":"exact"}],"termid":"GO:0004207"}


id: PBO:0011522
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dfp1 half-life 30-45 minutes in S and G2 phases","termid":"PBO:0011522"}


id: GO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of folate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to folate","termid":"GO:0043326"}


id: _global:negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of negatively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulated_by","secondary_identifiers":["RO:0002335"],"termid":"_global:negatively_regulated_by"}


id: MONDO:0013683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 5","secondary_identifiers":["MEDGEN:482070","OMIM:614318","GARD:18422","UMLS:C3280440"],"synonyms":[{"name":"VUR5","type":"exact"},{"name":"vesicoureteral reflux 5","type":"exact"}],"termid":"MONDO:0013683","xrefs":{"Monarch":{"xref_id":"0013683"}}}


id: GO:0003235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sinus venosus over time, from its formation to the mature structure. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinus venosus development","termid":"GO:0003235"}


id: PBO:0087861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of genes involved in glycolysis; DNA-binding protein that interacts and functions with the transcriptional activator Gcr2p; contains a long intron, which allows multiple RNA and protein isoforms with varying expression levels depending on glucose availability","termid":"PBO:0087861"}


id: GO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tellurium ion","termid":"GO:0046690"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tellurium ion","synonyms":[{"name":"cellular response to tellurium","type":"exact"}],"termid":"GO:0071293"}


id: PBO:0046385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelium and lymphocyte associated ASCH domain 2","termid":"PBO:0046385"}


id: GO:1990325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXVII) chains. These trimers form thin, non-striated fibrils. Type XXVII collagen triple helices play a role during the calcification of cartilage and the transition of cartilage to bone.","definition_xrefs":["PMID:21421911","GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXVII trimer","termid":"GO:1990325"}


id: PBO:0090366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GRIP domain protein Grp2","termid":"PBO:0090366"}


id: PR:000028989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sterol regulatory element-binding protein that is a translation product of the Schizosaccharomyces pombe 972h- sre1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sre1-type sterol regulatory element-binding protein 1","synonyms":[{"name":"SRE-1","type":"related"},{"name":"SRE1","type":"related"},{"name":"SREBP1","type":"related"},{"name":"sre1","type":"exact"}],"termid":"PR:000028989"}


id: FYPO:0005365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore sliding, i.e. the movement of a kinetochore along spindle microtubules, during mitotic chromosome recapture does not occur.","definition_xrefs":["PomBase:mah","PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0000631","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished kinetochore sliding during chromosome recapture","synonyms":[{"name":"abolished chromosome migration during chromosome recapture","type":"exact"},{"name":"abolished chromosome movement during chromosome recapture","type":"exact"},{"name":"abolished kinetochore migration during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding along kinetochore microtubule towards spindle pole body during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding during chromosome recapture during mitosis","type":"exact"},{"name":"abolished kinetochore sliding during chromosome recapture during vegetative growth","type":"exact"},{"name":"abolished kinetochore sliding during kinetochore retrieval","type":"exact"},{"name":"abolished kinetochore sliding during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abolished kinetochore sliding during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abolished kinetochore sliding during mitotic metaphase chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding during sister kinetochore recapture","type":"exact"},{"name":"abolished kinetochore sliding towards SPB during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding towards spindle pole body during chromosome recapture","type":"exact"},{"name":"kinetochore sliding during chromosome recapture abolished","type":"exact"}],"termid":"FYPO:0005365"}


id: MONDO:0012590
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86855],"is_not":false,"summary":null,"term":"MONDO:0012590"}]},"cv_name":"mondo","definition":"A syndrome characterized by aged bird-like facies, lack of subcutaneous fat, dwarfism, cachexia and microcephaly. Additional features include sun-sensitivity from birth, learning disabilities, hearing loss, and visual impairment. It has material basis in homozygous mutation in the ERCC4 gene on chromosome 16p13.","definition_xrefs":["DOID:0060590","PMID:17183314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"is_obsolete":false,"name":"XFE progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:610965","MESH:C567043","UMLS:C1970416","MEDGEN:410064","NCIT:C173111"],"synonyms":[{"name":"XFE progeroid syndrome","type":"exact"},{"name":"XFEPS","type":"exact"},{"name":"XPF-ERCC1 progeroid syndrome","type":"exact"}],"termid":"MONDO:0012590","terms_by_termid":{"MONDO:0012590":null},"xrefs":{"Monarch":{"xref_id":"0012590"}}}


id: PBO:0089581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5","termid":"PBO:0089581"}


id: MONDO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder characterized by an intense, irrational fear of venturing out into open places or situations in which help (or escape) might not be available should excessive anxiety or panic symptoms develop.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phobic disorder","termid":"MONDO:0003699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agoraphobia","secondary_identifiers":["EFO:1001872","MEDGEN:175","icd11.foundation:530592394","SCTID:70691001","UMLS:C0001818","DOID:593","ICD10CM:F40.0","NCIT:C34362","MESH:D000379"],"synonyms":[{"name":"fear of open spaces","type":"exact"},{"name":"fear of open spaces (finding)","type":"exact"}],"termid":"MONDO:0003709","xrefs":{"Monarch":{"xref_id":"0003709"}}}


id: GO:0006792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sulfur utilization","synonyms":[{"name":"regulation of sulphur utilization","type":"exact"}],"termid":"GO:0006792"}


id: MONDO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"rubeosis iridis","secondary_identifiers":["SCTID:51995000","UMLS:C0154916","DOID:14000","ICD9:364.42","MEDGEN:488789"],"termid":"MONDO:0001855","xrefs":{"Monarch":{"xref_id":"0001855"}}}


id: MONDO:0015468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis-cataract syndrome","secondary_identifiers":["Orphanet:1530"],"termid":"MONDO:0015468","xrefs":{"Monarch":{"xref_id":"0015468"}}}


id: PBO:0086993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon-interacting protein; ER integral membrane protein involved in the generation of tubular ER morphology; promotes membrane curvature; forms tubules in vitro; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Yip1p to mediate membrane traffic and with Sey1p to maintain ER morphology; facilitates lipid exchange between the ER and mitochondria; forms ER foci upon DNA replication stress","termid":"PBO:0086993"}


id: PBO:0113745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 1","termid":"PBO:0113745"}


id: SO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a two-piece tmRNA that bears the reading frame encoding the proteolysis tag. The tmRNA gene undergoes circular permutation in some groups of bacteria. Processing of the transcripts from such a gene leaves the mature tmRNA in two pieces, base-paired together.","definition_xrefs":["issn:1362-4962","doi:10.1093/nar/gkh795","Indiana:kw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tmRNA_region","termid":"SO:0000847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_coding_piece","synonyms":[{"name":"tmRNA coding piece","type":"exact"}],"termid":"SO:0000769"}


id: PBO:0062498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 2","termid":"PBO:0062498"}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: PBO:0031795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_cell_cycle_progression","termid":"PBO:0031795"}


id: PBO:0070532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 31","termid":"PBO:0070532"}


id: PBO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD101 antisense RNA 1","termid":"PBO:0042359"}


id: GO:0009701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid biosynthetic process","termid":"GO:0009717"},{"relation_name":"is_a","term_name":"isoflavonoid phytoalexin metabolic process","termid":"GO:0046289"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"isoflavonoid phytoalexin biosynthetic process","synonyms":[{"name":"isoflavonoid phytoalexin anabolism","type":"exact"},{"name":"isoflavonoid phytoalexin biosynthesis","type":"exact"},{"name":"isoflavonoid phytoalexin formation","type":"exact"},{"name":"isoflavonoid phytoalexin synthesis","type":"exact"}],"termid":"GO:0009701"}


id: GO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + acetyl-CoA + H2O = L-2-acetamido-6-oxopimelate + CoA.","definition_xrefs":["RHEA:13085","EC:2.3.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tetrahydrodipicolinate N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04364","MetaCyc:2.3.1.89-RXN"],"synonyms":[{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydrodipicolinate-2,6-dicarboxylate N2-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 2-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate acetylase activity","type":"related"},{"name":"tetrahydrodipicolinate:acetyl-CoA acetyltransferase activity","type":"related"}],"termid":"GO:0047200"}


id: GO:0102293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pheophytin b + H2O = H+ + pheophorbide b + phytol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pheophytinase b activity (obsolete GO:0102293)","termid":"GO:0102293"}


id: MONDO:0012373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia, sensorineural hearing loss, and distinctive facial features","secondary_identifiers":["MEDGEN:355878","MESH:C536182","UMLS:C1864966","OMIM:609944"],"synonyms":[{"name":"ectodermal dysplasia, sensorineural hearing loss, and distinctive facial features","type":"exact"}],"termid":"MONDO:0012373","xrefs":{"Monarch":{"xref_id":"0012373"}}}


id: PR:Q9HGQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C212.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.02","synonyms":[{"name":"Spom972h-SPAC212.02","type":"exact"}],"termid":"PR:Q9HGQ0"}


id: PR:O74865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph7 gene.","definition_xrefs":["UniProtKB:O74865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.15","synonyms":[{"name":"Spom972h-dph7","type":"exact"},{"name":"WD repeat-containing protein rrt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diphthamide biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74865"}


id: MONDO:0010501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrocephaly-intellectual disability-left ventricular non compaction syndrome is a rare, genetic, syndromic intellectual disability characterized by motor and cognitive developmental delay with language impairment, macrocephaly, hypotonia, dysmorphic facial features (including long face, slanting palpebral fissures and prominent, flattened nose) and left ventricular noncompaction cardiomyopathy. Patients also present skeletal abnormalities (e.g. scoliosis, finger clinodactyly, pes planus), slender build and shy behavior. Strabismus and various neurological signs (including ataxia, tremor and hyperreflexia) may be associated, as well as epilepsy, autism and MRI findings showing a small cerebellum and abnormalities of the corpus callosum. A phenotypic variant with no cardiac involvement has been reported.","definition_xrefs":["Orphanet:466791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability 34","secondary_identifiers":["OMIM:300967","GARD:17832","MEDGEN:902184","DOID:0060817","UMLS:C4225417"],"synonyms":[{"name":"MRXS34","type":"exact"},{"name":"MRXSML","type":"exact"},{"name":"NONO X-linked syndromic intellectual disability","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in NONO","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Mircsof-Langouet type","type":"related"},{"name":"macrocephaly-intellectual disability-left ventricular non compaction syndrome","type":"exact"},{"name":"mental retardation, X-linked, syndromic 34","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 34","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Mircsof-Langouet type","type":"related"},{"name":"syndromic X-linked intellectual disability Mircsof-Langouet type","type":"exact"},{"name":"syndromic X-linked intellectual disability type 34","type":"exact"},{"name":"syndromic X-linked mental retardation Mircsof-Langouet type","type":"exact"}],"termid":"MONDO:0010501","xrefs":{"Monarch":{"xref_id":"0010501"}}}


id: GO:1900446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of tRNA transcription from RNA polymerase III promoter.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of tRNA transcription from RNA polymerase III promoter (obsolete GO:1900446)","synonyms":[{"name":"down regulation of tRNA transcription from Pol III promoter","type":"exact"},{"name":"down regulation of tRNA transcription from RNA polymerase III promoter","type":"exact"},{"name":"down-regulation of tRNA transcription from Pol III promoter","type":"exact"},{"name":"down-regulation of tRNA transcription from RNA polymerase III promoter","type":"exact"},{"name":"downregulation of tRNA transcription from Pol III promoter","type":"exact"},{"name":"downregulation of tRNA transcription from RNA polymerase III promoter","type":"exact"},{"name":"inhibition of tRNA transcription from Pol III promoter","type":"exact"},{"name":"inhibition of tRNA transcription from RNA polymerase III promoter","type":"narrow"},{"name":"negative regulation of tRNA transcription from Pol III promoter","type":"exact"}],"termid":"GO:1900446"}


id: FYECO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at sub lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ micafungin","termid":"FYECO:0000395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin SLD","termid":"FYECO:0000396"}


id: MONDO:0013044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with thrombomodulin anomaly","secondary_identifiers":["UMLS:C2752036","GARD:18556","Orphanet:217023","MEDGEN:414541","OMIM:612926"],"synonyms":[{"name":"AHUS6","type":"related"},{"name":"Ahus, susceptibility to, 6","type":"related"},{"name":"D-HUS with thrombomodulin anomaly","type":"exact"},{"name":"aHUS with thrombomodulin anomaly","type":"exact"},{"name":"atypical HUS with thrombomodulin anomaly","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 6","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 6","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with thrombomodulin anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with thrombomodulin anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 6","type":"related"}],"termid":"MONDO:0013044","xrefs":{"Monarch":{"xref_id":"0013044"}}}


id: FYPO:0004616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, does not occur at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["GO:0070462","PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"abolished cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"abolished microtubule catastrophe at cell tip","type":"related"},{"name":"abolished microtubule plus end shrinkage at cell tip","type":"related"},{"name":"abolished plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"cytoplasmic microtubule depolymerization at plus end at cell tip abolished","type":"exact"}],"termid":"FYPO:0004616"}


id: FYPO:0001077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal polysaccharide level","synonyms":[{"name":"normal polysaccharide accumulation","type":"related"},{"name":"normal polysaccharide level during mitotic cell cycle","type":"related"},{"name":"normal polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001077"}


id: GO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, in response to an external chemical gradient, usually toward or away from it.","definition_xrefs":["GOC:jl","PMID:10087613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotropism","secondary_identifiers":["Wikipedia:Chemotropism"],"termid":"GO:0043577"}


id: FYPO:0006032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:28481910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin during mitotic DNA replication","synonyms":[{"name":"decreased protein localisation to chromatin during mitotic DNA replication","type":"exact"},{"name":"decreased protein localization to chromatin during DNA replication during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin during DNA replication during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin during mitotic DNA replication","type":"exact"}],"termid":"FYPO:0006032"}


id: SO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' most coding exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon","synonyms":[{"name":"5' coding exon","type":"exact"},{"name":"five prime coding exon","type":"exact"}],"termid":"SO:0000200"}


id: PBO:0089577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex RNA helicase subunit Mtl1","termid":"PBO:0089577"}


id: PBO:0039448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and LEM domain containing 1","termid":"PBO:0039448"}


id: PR:000050595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A microtubule protein alp7 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-50, Ser-51, Thr-100, Thr-116, and Thr-131 of the amino acid sequence represented by UniProtKB:Q9URY2. Example: UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047.","definition_xrefs":["PMID:24790093","PomBase:MLR","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule protein alp7 (Schizosaccharomyces pombe)","termid":"PR:000050514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alp7/Phos:(S50,S51,T100,T116,T131)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: microtubule protein alp7 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-alp7/Phos:2","type":"exact"},{"name":"UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047","type":"narrow"},{"name":"alp7/Phos:(S50,S51,T100,T116,T131)","type":"exact"}],"termid":"PR:000050595"}


id: PBO:0041638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 E","termid":"PBO:0041638"}


id: MONDO:0011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any left ventricular noncompaction in which the cause of the disease is a mutation in the DTNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 1","secondary_identifiers":["OMIM:604169","UMLS:C1858725","MEDGEN:349005"],"synonyms":[{"name":"DTNA left ventricular noncompaction","type":"exact"},{"name":"LVNC1","type":"related"},{"name":"left ventricular noncompaction 1","type":"exact"},{"name":"left ventricular noncompaction 1 with or without congenital heart defects","type":"related"},{"name":"left ventricular noncompaction 1, with or without congenital heart defects","type":"exact"},{"name":"left ventricular noncompaction caused by mutation in DTNA","type":"exact"},{"name":"left ventricular noncompaction type 1","type":"exact"}],"termid":"MONDO:0011403","xrefs":{"Monarch":{"xref_id":"0011403"}}}


id: GO:0103059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol oxoanion + UDP-L-rhamnose = H+ + kaempferol-3-rhamnoside + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-L-rhamnose:kaempferol 3-O-rhamnosyltransferase activity (obsolete GO:0103059)","termid":"GO:0103059"}


id: MONDO:0017579
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013812"}]},"cv_name":"mondo","definition":"Baraitser-Winter syndrome (BWS) is a malformation syndrome, characterized by facial dysmorphism (hypertelorism with ptosis, broad bulbous nose, ridged metopic suture, arched eyebrows, progressive coarsening of the face), ocular coloboma, pachygyria and/or band heterotopias with antero-posterior gradient, progressive joint stiffening, and intellectual deficit of variable severity, often with severe epilepsy. Pachygyria - epilepsy - intellectual disability - dysmorphism (Fryns-Aftimos syndrome (FA)) corresponds to the appearance of BWS in elderly patients.","definition_xrefs":["Orphanet:2995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Baraitser-Winter cerebrofrontofacial syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060229","ICD9:759.89","OMIMPS:243310","GARD:5279","MEDGEN:340016","SCTID:702410002","UMLS:C1853623"],"synonyms":[{"name":"BRWS","type":"related"},{"name":"Baraitser-Winter syndrome","type":"exact"},{"name":"Fryns-Aftimos syndrome","type":"related"},{"name":"cerebro-frontofacial syndrome, type 3","type":"related"},{"name":"iris coloboma with ptosis hypertelorism and intellectual disability","type":"related"},{"name":"iris coloboma with ptosis hypertelorism and mental retardation","type":"related"},{"name":"trigonocephaly ptosis coloboma","type":"related"},{"name":"trigonocephaly ptosis intellectual disability","type":"related"},{"name":"trigonocephaly ptosis mental retardation","type":"related"}],"termid":"MONDO:0017579","terms_by_termid":{"MONDO:0013812":null},"xrefs":{"Monarch":{"xref_id":"0017579"}}}


id: FYPO:0004072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during a cellular response to a pheromone. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to pheromone","synonyms":[{"name":"transcripts absent from cell during cellular response to pheromone","type":"exact"},{"name":"undetectable RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0004072"}


id: GO:1990019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a protein storage vacuole, a storage vacuole that contains a lytic vacuole.","definition_xrefs":["GOC:tb","PMID:21670741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein storage vacuole organization","termid":"GO:1990019"}


id: PR:O14033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.12 gene.","definition_xrefs":["UniProtKB:O14033","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.12","synonyms":[{"name":"Spom972h-SPAC29B12.12","type":"exact"}],"termid":"PR:O14033"}


id: MONDO:0005796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by chronic, well-established diarrhea (greater than one month in duration) without an identified infectious cause after thorough evaluation, in an hiv-positive individual. It is thought to be due to direct or indirect effects of hiv on the enteric mucosa. hiv enteropathy is a diagnosis of exclusion and can be made only after other forms of diarrheal illness have been ruled out. (Harrison's Principles of Internal Medicine, 13th ed, pp1607-8; Haubrich et al., Bockus Gastroenterology, 5th ed, p1155)","definition_xrefs":["MESH:D019053"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"excluded_subClassOf","term_name":"HIV infectious disease","termid":"MONDO:0005109"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"HIV enteropathy","secondary_identifiers":["UMLS:C0282616","EFO:0007311","MEDGEN:79492"],"termid":"MONDO:0005796","xrefs":{"Monarch":{"xref_id":"0005796"}}}


id: PBO:0073146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 interacting protein","termid":"PBO:0073146"}


id: PBO:0069355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 615, pseudogene","termid":"PBO:0069355"}


id: GO:2000956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"positively_regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclodextrin metabolic process","synonyms":[{"name":"positive regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000956"}


id: PATO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000466 none (obsolete PATO:0000466)","termid":"PATO:0000466"}


id: MOD:01270
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","PubMed:14670044","Unimod:271#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site S","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01270"}


id: PBO:0016075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp3 (predicted)","termid":"PBO:0016075"}


id: PBO:0051901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 9","termid":"PBO:0051901"}


id: PBO:0026759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026759"}


id: PBO:0085216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase for Vac8p; required for vacuolar membrane fusion; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; autoacylates; required for vacuolar integrity under stress conditions","termid":"PBO:0085216"}


id: GO:2001186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"}


id: PBO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nibrin","termid":"PBO:0060564"}


id: MONDO:0012961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 4q27.","definition_xrefs":["DOID:0110760","PMID:8072542","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 23","secondary_identifiers":["MESH:C567233","OMIM:612622","MEDGEN:382610","UMLS:C2675472"],"synonyms":[{"name":"IDDM23","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 23","type":"related"},{"name":"insulin-dependent diabetes mellitus 23","type":"exact"}],"termid":"MONDO:0012961","xrefs":{"Monarch":{"xref_id":"0012961"}}}


id: GO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte proliferation","termid":"GO:0050672"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"negatively_regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell proliferation","synonyms":[{"name":"down regulation of T cell proliferation","type":"exact"},{"name":"down-regulation of T cell proliferation","type":"exact"},{"name":"downregulation of T cell proliferation","type":"exact"},{"name":"inhibition of T cell proliferation","type":"narrow"},{"name":"negative regulation of T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of T-cell proliferation","type":"exact"},{"name":"negative regulation of T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042130"}


id: GO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: triethanolamine = diethanolamine + acetaldehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine lyase activity (obsolete GO:0018825)","termid":"GO:0018825"}


id: PBO:0084157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity sulfate permease of the SulP anion transporter family; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates","termid":"PBO:0084157"}


id: MONDO:1010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, non-human animal","secondary_identifiers":["OMIA:000807"],"termid":"MONDO:1010262","xrefs":{"Monarch":{"xref_id":"1010262"}}}


id: PATO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that is almost an ellipse.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subelliptical","termid":"PATO:0005004"}


id: PBO:0108966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1C","termid":"PBO:0108966"}


id: GO:0032547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a purine deoxyribonucleoside, a compound consisting of a purine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"purine deoxyribonucleoside binding","termid":"GO:0032547"}


id: PBO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase ecto","termid":"PBO:0061563"}


id: MONDO:0010926
data:
  {"annotated_genes":["SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85832],"is_not":false,"summary":null,"term":"MONDO:0010926"}]},"cv_name":"mondo","definition":"Any familial hypocalciuric hypercalcemia in which the cause of the disease is a mutation in the AP2S1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypocalciuric hypercalcemia","termid":"MONDO:0018458"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial hypocalciuric hypercalcemia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:322173","DOID:0060702","Orphanet:101050","MESH:C537147","OMIM:600740","GARD:2878","UMLS:C1833372"],"synonyms":[{"name":"AP2S1 familial hypocalciuric hypercalcemia","type":"exact"},{"name":"FBH3","type":"related"},{"name":"FBHOk","type":"related"},{"name":"FHH type 3","type":"exact"},{"name":"HHC3","type":"exact"},{"name":"familial benign hypercalcemia, Oklahoma variant","type":"related"},{"name":"familial benign hypercalcemia, type 3","type":"related"},{"name":"familial hypocalciuric hypercalcemia caused by mutation in AP2S1","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type 3","type":"exact"},{"name":"hpocalciuric hypercalcemia, type III","type":"exact"},{"name":"hypercalcemia, familial benign, Oklahoma type","type":"related"},{"name":"hypercalcemia, familial benign, type 3","type":"related"},{"name":"hypocalciuric hypercalcemia type III","type":"exact"},{"name":"hypocalciuric hypercalcemia, familial, type 3","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type III","type":"related"}],"termid":"MONDO:0010926","terms_by_termid":{"MONDO:0010926":null},"xrefs":{"Monarch":{"xref_id":"0010926"}}}


id: MONDO:0010075
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87092],"is_not":false,"summary":null,"term":"MONDO:0010075"}]},"cv_name":"mondo","definition":"Any spondyloepimetaphyseal dysplasia with joint laxity in which the cause of the disease is a mutation in the B3GALT6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"},{"relation_name":"is_a","term_name":"B3GALT6-congenital disorder of glycosylation","termid":"MONDO:0100586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112198","OMIM:271640","UMLS:C4017377","Orphanet:642099","MEDGEN:865814"],"synonyms":[{"name":"B3GALT6 spondyloepimetaphyseal dysplasia with joint laxity","type":"exact"},{"name":"SEMDJL","type":"broad"},{"name":"SEMDJL1","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity, type 1, with or without fractures","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity caused by mutation in B3GALT6","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, Beighton type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","type":"exact"}],"termid":"MONDO:0010075","terms_by_termid":{"MONDO:0010075":null},"xrefs":{"Monarch":{"xref_id":"0010075"}}}


id: PBO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 1","termid":"PBO:0039638"}


id: FYPO:0005161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression resumes after a longer time than normal after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:16849602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"delayed cell cycle progression following HU exposure","type":"exact"},{"name":"delayed cell cycle progression following cellular response to HU","type":"exact"},{"name":"delayed cell cycle progression following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005161"}


id: MOD:00939
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"hydrolyzed N-methylmaleimide cysteine adduct","synonyms":[{"name":"Nmethylmaleimide+water","type":"related"},{"name":"Nmethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:00939"}


id: PBO:0065776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamylated RFamide peptide","termid":"PBO:0065776"}


id: FYPO:0003433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000661","FYPO:0005447","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}


id: MONDO:0006218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic, non-invasive lesion that affects the gallbladder epithelium. It is characterized by the presence of atypical epithelial cells with an increased nuclear/cytoplasmic ratio, nuclear hyperchromasia, and loss of nuclear polarity.","definition_xrefs":["NCIT:C43606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder neoplasm","termid":"MONDO:0021253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder biliary intraepithelial neoplasia","secondary_identifiers":["MEDGEN:317714","EFO:1000265","UMLS:C1708174"],"synonyms":[{"name":"gallbladder BilIN","type":"exact"},{"name":"gallbladder biliary intraepithelial neoplasia","type":"exact"},{"name":"gallbladder dysplasia","type":"exact"},{"name":"gallbladder intraepithelial neoplasia","type":"exact"},{"name":"intracystic BilIN","type":"exact"},{"name":"intracystic biliary intraepithelial neoplasia","type":"exact"}],"termid":"MONDO:0006218","xrefs":{"Monarch":{"xref_id":"0006218"}}}


id: GO:0005758
data:
  {"annotated_genes":["SJAG_05398","SJAG_01560","SJAG_00449","SJAG_01949","SJAG_00687","SJAG_00480","SJAG_01996","SJAG_00668","SJAG_04008","SJAG_02038","SJAG_00576","SJAG_04116","SJAG_03574","SJAG_05199","SJAG_03199","SJAG_01647","SJAG_02744","SJAG_00196","SJAG_00564","SJAG_02360","SJAG_05261","SJAG_02917","SJAG_00230","SJAG_00455","SJAG_01140","SJAG_04533","SJAG_06440","SJAG_02656","SJAG_02229","SJAG_02887","SJAG_04208","SJAG_02524","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59486,61079,61597,62066,62900,67108,69642,70537,76631,77091,77539,78292,78637,79067,88664,94699,94774,95302,97462,100394,100479,102532,104334,105226,107180,107487,107792,113424,117353],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[116568,90728,93127,88997],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the mitochondrial envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"mitochondrial envelope","termid":"GO:0005740"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00230":null,"SJAG_00449":null,"SJAG_00455":null,"SJAG_00480":null,"SJAG_00564":null,"SJAG_00576":null,"SJAG_00668":null,"SJAG_00687":null,"SJAG_01140":null,"SJAG_01560":null,"SJAG_01647":null,"SJAG_01949":null,"SJAG_01996":null,"SJAG_02038":null,"SJAG_02229":null,"SJAG_02360":null,"SJAG_02524":null,"SJAG_02592":null,"SJAG_02656":null,"SJAG_02744":null,"SJAG_02887":null,"SJAG_02917":null,"SJAG_03199":null,"SJAG_03574":null,"SJAG_04008":null,"SJAG_04116":null,"SJAG_04208":null,"SJAG_04533":null,"SJAG_05199":null,"SJAG_05261":null,"SJAG_05398":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial intermembrane space","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao118944228","GO:0031971"],"synonyms":[{"name":"mitochondrial envelope lumen","type":"exact"},{"name":"mitochondrial membrane lumen","type":"related"}],"termid":"GO:0005758","terms_by_termid":{"GO:0005758":null,"GO:0042719":null}}


id: GO:0072499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of a photoreceptor cell axon growth cone to its target in the optic lobe in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:sart","PMID:20826677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell axon guidance","synonyms":[{"name":"photoreceptor cell axon pathfinding","type":"exact"}],"termid":"GO:0072499"}


id: PBO:0055842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRIG2 divergent transcript","termid":"PBO:0055842"}


id: PBO:0059346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S11 pseudogene 1","termid":"PBO:0059346"}


id: GO:1901706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of bone as it progresses from its formation to the mature state.","definition_xrefs":["GOC:hjd","PMID:21571217","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in bone development","termid":"GO:1901706"}


id: PBO:0043503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3","termid":"PBO:0043503"}


id: GO:2001013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any epithelial cell proliferation that is involved in renal tubule morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"renal tubule morphogenesis","termid":"GO:0061333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in renal tubule morphogenesis","termid":"GO:2001013"}


id: GO:0098859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bundle of cross-linked actin filaments that is part of an actin-based cell protrusion, in which filaments are oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex which stabilizes the filaments.","definition_xrefs":["PMID:15661519","PMID:12566431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle","termid":"GO:0097518"},{"relation_name":"part_of","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"}


id: PBO:0072470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA","termid":"PBO:0072470"}


id: PBO:0062791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 5","termid":"PBO:0062791"}


id: MONDO:0007907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign conjunctival neoplasm","termid":"MONDO:0006105"},{"relation_name":"is_a","term_name":"lipoma of face","termid":"MONDO:0021630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lipoma of the conjunctiva","secondary_identifiers":["OMIM:151700","MEDGEN:372030","MESH:C563620","UMLS:C1835373"],"synonyms":[{"name":"lipoma of the conjunctiva","type":"exact"}],"termid":"MONDO:0007907","xrefs":{"Monarch":{"xref_id":"0007907"}}}


id: PBO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Pmk1 MAP kinase","termid":"PBO:0016518"}


id: FYPO:0003403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0005447","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}


id: FYPO:0003768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to mitochondrion","synonyms":[{"name":"normal protein localisation to mitochondrion","type":"exact"},{"name":"normal protein localization to mitochondria","type":"exact"},{"name":"normal protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal protein localization to mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0003768"}


id: MONDO:0012531
data:
  {"annotated_genes":["SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86212],"is_not":false,"summary":null,"term":"MONDO:0012531"}]},"cv_name":"mondo","definition":"Any xeroderma pigmentosum in which the cause of the disease is a mutation in the ERCC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum-Cockayne syndrome complex","termid":"MONDO:0016354"},{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190","MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum group B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110850","MESH:C562590","GARD:5625","OMIM:610651","MEDGEN:78643","Orphanet:276252","SCTID:1073003","NCIT:C3966","UMLS:C0268136"],"synonyms":[{"name":"ERCC3 xeroderma pigmentosum","type":"exact"},{"name":"XP group B","type":"exact"},{"name":"XP, Group B","type":"exact"},{"name":"XP-B","type":"exact"},{"name":"XPB","type":"exact"},{"name":"XPB/CS","type":"related"},{"name":"XPBC","type":"exact"},{"name":"xeroderma pigmentosum B/Cockayne syndrome","type":"related"},{"name":"xeroderma pigmentosum caused by mutation in ERCC3","type":"exact"},{"name":"xeroderma pigmentosum group B","type":"exact"},{"name":"xeroderma pigmentosum group type B","type":"exact"},{"name":"xeroderma pigmentosum, complementation group B","type":"related"},{"name":"xeroderma pigmentosum, complementation group type B","type":"exact"},{"name":"xeroderma pigmentosum, group B","type":"exact"},{"name":"xeroderma pigmentosum, type 2","type":"related"}],"termid":"MONDO:0012531","terms_by_termid":{"MONDO:0012531":null},"xrefs":{"Monarch":{"xref_id":"0012531"}}}


id: GO:0043418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"homocysteine metabolic process","termid":"GO:0050667"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"homocysteine catabolic process","synonyms":[{"name":"homocysteine breakdown","type":"exact"},{"name":"homocysteine catabolism","type":"exact"},{"name":"homocysteine degradation","type":"exact"}],"termid":"GO:0043418"}


id: MONDO:1012673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of progressive retinal atrophy that occurs in dogs due to a mutation in the RHO gene.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant progressive retinal atrophy, RHO-related, dog","secondary_identifiers":["OMIA:001346-9615"],"synonyms":[{"name":"ADPRA","type":"exact"}],"termid":"MONDO:1012673","xrefs":{"Monarch":{"xref_id":"1012673"}}}


id: MONDO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth hard tissue disease","secondary_identifiers":["ICD9:521.8","ICD9:521.89","MEDGEN:510140","SCTID:46557008","UMLS:C0155926","DOID:214","ICD10CM:K03"],"synonyms":[{"name":"disorder of hard tissues of teeth","type":"exact"},{"name":"teeth hard tissue disease","type":"related"},{"name":"teeth hard tissue diseases","type":"related"}],"termid":"MONDO:0002220","xrefs":{"Monarch":{"xref_id":"0002220"}}}


id: PBO:0091959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase","termid":"PBO:0091959"}


id: PBO:0046482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6 like, spindle assembly checkpoint helicase","termid":"PBO:0046482"}


id: MONDO:0100402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly del(13q14-q21). (A cytogenetic abnormality that refers to deletion of chromosome bands 14-21 on the long arm of chromosome 13.)","definition_xrefs":["NCIT:C168770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, del(13q14-q21)","synonyms":[{"name":"AML, 13q14-q21 Deletion","type":"exact"},{"name":"AML, del(13)(q14-q21)","type":"exact"},{"name":"AML, del(13)(q14q21)","type":"exact"},{"name":"AML, del(13q)(13q14-21)","type":"exact"},{"name":"AML, del(13q14-q21)","type":"exact"}],"termid":"MONDO:0100402","xrefs":{"Monarch":{"xref_id":"0100402"}}}


id: GO:0034410
data:
  {"annotated_genes":["SJAG_01835","SJAG_04771","SJAG_00610","SJAG_04659","SJAG_01787","SJAG_04483","SJAG_01288","SJAG_03587","SJAG_04668","SJAG_04666","SJAG_03705","SJAG_01255","SJAG_03123","SJAG_01290","SJAG_00876","SJAG_04462","SJAG_02222","SJAG_01453","SJAG_00218","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[73432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[91934,71263,76219,113470,73434,74865,116121,106427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102959,78611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[87862,92759],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[103162,91108,105668,92743,118209,106240,118337],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall beta-glucan metabolic process","termid":"GO:0034406"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall beta-glucan anabolism","type":"exact"},{"name":"cell wall beta-glucan biosynthesis","type":"exact"},{"name":"cell wall beta-glucan formation","type":"exact"},{"name":"cell wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0034410","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0042925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"benzoate transmembrane transporter activity","synonyms":[{"name":"benzoate transporter activity","type":"related"}],"termid":"GO:0042925"}


id: PBO:0083712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting; SPT23 has a paralog, MGA2, that arose from the whole genome duplication","termid":"PBO:0083712"}


id: PBO:0085874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified as a high-copy suppressor of a dbp5 mutation; GFD2 has a paralog, YDR514C, that arose from the whole genome duplication","termid":"PBO:0085874"}


id: GO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A swelling at a site along the length of a polytene chromosome, thought to be the site of active transcription.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome puff","termid":"GO:0005703"}


id: PBO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-represses_expression_of","termid":"PBO:0034319"}


id: GO:0000105
data:
  {"annotated_genes":["SJAG_02400","SJAG_00592","SJAG_01137","SJAG_03775","SJAG_03055","SJAG_01346","SJAG_04747","SJAG_00248"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57877,60013,64480,71494,76191,76949,78790,80653],"is_not":false,"summary":null,"term":"GO:0000105"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine metabolic process","termid":"GO:0006547"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-histidine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["MetaCyc:HISTSYN-PWY"],"synonyms":[{"name":"histidine anabolism","type":"exact"},{"name":"histidine biosynthesis","type":"exact"},{"name":"histidine biosynthetic process","type":"broad"},{"name":"histidine formation","type":"exact"},{"name":"histidine synthesis","type":"exact"}],"termid":"GO:0000105","terms_by_termid":{"GO:0000105":null}}


id: MONDO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma (disease) that involves the bone tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"chondrosarcoma","termid":"MONDO:0008977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone chondrosarcoma","secondary_identifiers":["MEDGEN:756255","UMLS:C3163843","DOID:0050897"],"synonyms":[{"name":"bone tissue chondrosarcoma (disease)","type":"exact"},{"name":"chondrosarcoma (disease) of bone tissue","type":"exact"}],"termid":"MONDO:0000515","xrefs":{"Monarch":{"xref_id":"0000515"}}}


id: PBO:0040197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 10","termid":"PBO:0040197"}


id: PBO:0005551
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.34","termid":"PBO:0005551"}


id: PBO:0043953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 1","termid":"PBO:0043953"}


id: PBO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain (predicted)","termid":"PBO:0017006"}


id: GO:0042101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains.","definition_xrefs":["ISBN:0781735149","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"T cell receptor complex","secondary_identifiers":["Wikipedia:T_cell_receptor"],"synonyms":[{"name":"T lymphocyte receptor complex","type":"exact"},{"name":"T-cell receptor complex","type":"exact"},{"name":"T-lymphocyte receptor complex","type":"exact"},{"name":"TCR","type":"related"},{"name":"TCR complex","type":"exact"}],"termid":"GO:0042101"}


id: PBO:0069230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 485, pseudogene","termid":"PBO:0069230"}


id: MONDO:0006047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the pancreas","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic adenocarcinoma","secondary_identifiers":["NCIT:C8294","ONCOTREE:PAAD","UMLS:C0281361","SCTID:700423003","DOID:4074","EFO:1000044","MEDGEN:83800"],"synonyms":[{"name":"PAAD","type":"related"},{"name":"adenocarcinoma - pancreas","type":"exact"},{"name":"adenocarcinoma of pancreas","type":"exact"},{"name":"adenocarcinoma of the pancreas","type":"exact"},{"name":"pancreas adenocarcinoma","type":"exact"},{"name":"pancreatic adenocarcinoma","type":"exact"}],"termid":"MONDO:0006047","xrefs":{"Monarch":{"xref_id":"0006047"}}}


id: GO:2001075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"},{"relation_name":"negatively_regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric ureteric bud development","termid":"GO:2001075"}


id: FYPO:0004693
data:
  {"alleles_by_uniquename":{"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119631],"is_not":false,"summary":null,"term":"FYPO:0004693"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03720":null},"genotype_count":1,"genotypes_by_uniquename":{"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to hydroxyurea","references_by_uniquename":{"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_03720"],"single_locus_genotype_uniquenames":["tel1delta"],"synonyms":[{"name":"normal cell population viability following cellular response to hydroxyurea","type":"exact"},{"name":"normal viability following HU exposure","type":"exact"},{"name":"normal viability following cellular response to HU","type":"exact"}],"termid":"FYPO:0004693","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004693":null}}


id: MONDO:0004256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the meninges of the lumbar region of the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar spinal canal and spinal cord meningioma","secondary_identifiers":["UMLS:C1334436","MEDGEN:232707","DOID:7515","NCIT:C5298"],"synonyms":[{"name":"lumbar intraspinal meningioma","type":"exact"},{"name":"meningioma of lumbar spinal canal and spinal cord","type":"exact"},{"name":"meningioma of the lumbar spinal canal and spinal cord","type":"exact"}],"termid":"MONDO:0004256","xrefs":{"Monarch":{"xref_id":"0004256"}}}


id: GO:0043313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of neutrophil degranulation","synonyms":[{"name":"regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043313"}


id: PBO:0005290
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally induced by Cuf1","termid":"PBO:0005290"}


id: MONDO:0022407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in Bardet-Biedl gene (obsolete MONDO:0022407)","secondary_identifiers":["Orphanet:156183"],"termid":"MONDO:0022407","xrefs":{"Monarch":{"xref_id":"0022407"}}}


id: PBO:0011437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, sensor for unfolded proteins in the ER Ire1","termid":"PBO:0011437"}


id: MONDO:0020132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete cranial nerve and nuclear aplasia (obsolete MONDO:0020132)","secondary_identifiers":["Orphanet:98518"],"termid":"MONDO:0020132","xrefs":{"Monarch":{"xref_id":"0020132"}}}


id: GO:0016068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I hypersensitivity","secondary_identifiers":["Wikipedia:Type_I_hypersensitivity"],"synonyms":[{"name":"immediate hypersensitivity response","type":"exact"}],"termid":"GO:0016068"}


id: PBO:0091555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit EtfA","termid":"PBO:0091555"}


id: PBO:0111953
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TfdA family","termid":"PBO:0111953"}


id: PBO:0086279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in pre-rRNA processing","termid":"PBO:0086279"}


id: MONDO:0023704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of blepharo-cheilo-dontic syndrome with with cleft lip and palate, complete absence of deciduous teeth, hypodontia of permanent teeth, hair alterations, hypertelorism, midface hypoplasia, abnormal EEG, syndactyly, and other findings. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:3037904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Martinez Monasterio Pinheiro syndrome","secondary_identifiers":["UMLS:C2931089","GARD:3404","MESH:C536027","MEDGEN:419330"],"synonyms":[{"name":"cleft lip-palate-oligodontia-syndactyly-hair alterations","type":"related"},{"name":"cleft lip/palate oligodontia syndactyly hair alterations","type":"related"}],"termid":"MONDO:0023704","xrefs":{"Monarch":{"xref_id":"0023704"}}}


id: PBO:0067100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 141, pseudogene","termid":"PBO:0067100"}


id: MONDO:0023204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Fukuda-Miyanomae-Nakata syndrome","secondary_identifiers":["GARD:2411","Orphanet:2060"],"synonyms":[{"name":"Cerebromuscular dystrophy, Fukuyama type","type":"related"},{"name":"FCMD","type":"related"},{"name":"Fukuyama type muscular dystrophy","type":"related"},{"name":"muscular dystrophy, congenital progressive, with intellectual disability","type":"related"},{"name":"muscular dystrophy, congenital progressive, with mental retardation","type":"related"},{"name":"muscular dystrophy, congenital, Fukuyama type","type":"related"},{"name":"muscular dystrophy, congenital, with central nervous system involvement","type":"related"}],"termid":"MONDO:0023204","xrefs":{"Monarch":{"xref_id":"0023204"}}}


id: PBO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0013754"}


id: GO:1904298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcytosis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:9664076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of transcytosis","termid":"GO:1904298"}


id: MONDO:0009208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faciothoracogenital syndrome","secondary_identifiers":["MESH:C536387","OMIM:227320","MEDGEN:443995","UMLS:C2931184"],"synonyms":[{"name":"congenital anomalies, involving mainly the face, thorax, and genitalia","type":"related"},{"name":"facio thoraco genital syndrome","type":"related"},{"name":"faciothoracogenital syndrome","type":"exact"}],"termid":"MONDO:0009208","xrefs":{"Monarch":{"xref_id":"0009208"}}}


id: MONDO:0012602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the RDX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 24","secondary_identifiers":["GARD:22626","MEDGEN:370208","MESH:C567027","DOID:0110482","OMIM:611022","UMLS:C1970239"],"synonyms":[{"name":"DFNB24","type":"narrow"},{"name":"RDX autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in RDX","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 24","type":"exact"},{"name":"deafness, autosomal recessive 24","type":"narrow"},{"name":"deafness, autosomal recessive type 24","type":"narrow"}],"termid":"MONDO:0012602","xrefs":{"Monarch":{"xref_id":"0012602"}}}


id: PBO:0074884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62B","termid":"PBO:0074884"}


id: PBO:0068160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 467","termid":"PBO:0068160"}


id: PBO:0028581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclease_activity","termid":"PBO:0028581"}


id: PBO:0045039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIX domain containing 1","termid":"PBO:0045039"}


id: FYPO:0006271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to floxuridine (5-fluoro-2'-deoxyuridine). Cells stop growing (and may die) at a concentration of floxuridine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to floxuridine","synonyms":[{"name":"hypersensitive to floxuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2'-deoxyuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2-deoxyuridine","type":"exact"},{"name":"sensitive to FUDR","type":"exact"},{"name":"sensitive to FdU","type":"exact"},{"name":"sensitive to floxuridin","type":"exact"},{"name":"sensitive to floxuridine during mitotic cell cycle","type":"related"},{"name":"sensitive to floxuridine during vegetative growth","type":"exact"}],"termid":"FYPO:0006271"}


id: PBO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 4","termid":"PBO:0071575"}


id: MONDO:0027091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sialadenitis","termid":"MONDO:0006969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"xanthogranulomatous sialadenitis","secondary_identifiers":["MESH:C536763","UMLS:C2931315","MEDGEN:444028"],"synonyms":[{"name":"sialadenitis, xanthogranulomatous","type":"exact"},{"name":"xanthogranulomatous salivary gland disease","type":"related"}],"termid":"MONDO:0027091","xrefs":{"Monarch":{"xref_id":"0027091"}}}


id: PBO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3","termid":"PBO:0000848"}


id: MONDO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oromandibular dystonia (obsolete MONDO:0000484)","termid":"MONDO:0000484","xrefs":{"Monarch":{"xref_id":"0000484"}}}


id: MONDO:0008154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteoma","termid":"MONDO:0005166"},{"relation_name":"is_a","term_name":"benign neoplasm of lower jaw bone","termid":"MONDO:0021522"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteomas of mandible","secondary_identifiers":["MESH:C563485","OMIM:166400","UMLS:C1833733","MEDGEN:318953"],"synonyms":[{"name":"osteomas of mandible","type":"exact"}],"termid":"MONDO:0008154","xrefs":{"Monarch":{"xref_id":"0008154"}}}


id: PBO:0078664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 1-1","termid":"PBO:0078664"}


id: MONDO:0010951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in variation in the chromosome region 9q13.","definition_xrefs":["DOID:0110443","PMID:7573045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1B","secondary_identifiers":["MEDGEN:1814491","UMLS:C5700078","OMIM:600884","GARD:15323"],"synonyms":[{"name":"cardiomyopathy, dilated 1B","type":"exact"},{"name":"cardiomyopathy, dilated, 1B","type":"related"},{"name":"cardiomyopathy, familial dilated","type":"related"},{"name":"cardiomyopathy, familial dilated, 1","type":"related"},{"name":"dilated cardiomyopathy type 1B","type":"exact"}],"termid":"MONDO:0010951","xrefs":{"Monarch":{"xref_id":"0010951"}}}


id: PBO:0028072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0028072"}


id: GO:0031612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex located in the cytosol of the cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, base subcomplex","termid":"GO:0008540"},{"relation_name":"part_of","term_name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle, base subcomplex","termid":"GO:0031612"}


id: GO:2000527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"}


id: PBO:0028575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_amino_acid_import_during_vegetative_growth","termid":"PBO:0028575"}


id: GO:0043413
data:
  {"annotated_genes":["SJAG_00183","SJAG_04952","SJAG_03333","SJAG_03764","SJAG_03774","SJAG_00334","SJAG_04053","SJAG_03311","SJAG_03082","SJAG_03188","SJAG_01595","SJAG_04095","SJAG_03149","SJAG_05219","SJAG_02783","SJAG_03330","SJAG_01972","SJAG_04770","SJAG_05348","SJAG_00554","SJAG_03555","SJAG_03871","SJAG_00437","SJAG_02163","SJAG_02102","SJAG_04090","SJAG_01069","SJAG_00747","SJAG_04231","SJAG_02056","SJAG_02903","SJAG_03676","SJAG_00598","SJAG_00816","SJAG_01389","SJAG_04571","SJAG_03790","SJAG_04316","SJAG_02996","SJAG_01021","SJAG_04728","SJAG_03150","SJAG_01276","SJAG_02648","SJAG_00924","SJAG_01006","SJAG_01950","SJAG_01491","SJAG_04401","SJAG_00831","SJAG_00394","SJAG_04363","SJAG_04954","SJAG_03656","SJAG_03056","SJAG_01264","SJAG_02519","SJAG_04127","SJAG_04821","SJAG_03032","SJAG_04906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105328,111398,61696,73448,75336,69412,65807,77575,94238,91466,63587,100109,77078,80367,100317,64578],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[68927,63297,75826,100353,108705,114263,96039,118125,67037,63659,72315,74831,58727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[77427,78386,75714,70301,79504,79708,74923,75151,111017,76033,77978,74008,78689,111023,80278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[105274,79548,98214,87850,74649,99104,76578,99103,99105,100652,118353,99106,79920,79105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[63016,77979,79709,111024,118354,75152,111018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[101862,106288,93377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment of a glycosyl residue to one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"},{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule glycosylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0043413","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null}}


id: PBO:0073864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1","termid":"PBO:0073864"}


id: PBO:0055814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipin 2","termid":"PBO:0055814"}


id: GO:0090443
data:
  {"annotated_genes":["SJAG_02514","SJAG_04455","SJAG_03508","SJAG_06270","SJAG_00229","SJAG_01790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70891,74992,95966,101588,107850,110477],"is_not":false,"summary":null,"term":"GO:0090443"}]},"cv_name":"cellular_component","definition":"A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.","definition_xrefs":["GOC:vw","PMID:21561862","PMID:22119525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FAR/SIN/STRIPAK complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAR complex","type":"related"},{"name":"SIN inhibitory phosphatase (SIP) complex","type":"exact"},{"name":"SIN inhibitory phosphatase complex","type":"exact"},{"name":"SIP complex","type":"exact"},{"name":"STRIPAK signalling complex","type":"related"},{"name":"striatin interacting phosphatase and kinase complex","type":"exact"}],"termid":"GO:0090443","terms_by_termid":{"GO:0090443":null}}


id: PBO:0036424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1","termid":"PBO:0036424"}


id: PBO:0112183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, possible cystathionine beta-lyase implicated in sulfur metabolism","termid":"PBO:0112183"}


id: PBO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase 2","termid":"PBO:0061159"}


id: GO:0150014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the apical pole of a neuron, and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["PMID:9214543","GOC:aruk","PMID:1720142","PMID:20629984","GO:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical distal dendrite","termid":"GO:0150014"}


id: PR:O13615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pleiotropic regulator 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02867","PANTHER:PTHR19923:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.07","secondary_identifiers":["UniProtKB:O13615"],"synonyms":[{"name":"Spom972h-PLRG1","type":"exact"},{"name":"complexed with cdc5 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13615"}


id: PBO:0076524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 pseudogene","termid":"PBO:0076524"}


id: PBO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein NIFK (predicted)","termid":"PBO:0005847"}


id: MONDO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-seizures-macrocephaly-obesity syndrome is a rare syndromic obesity due to complex chromosomal rearrangement characterized by development delay and intellectual disability, childhood-onset obesity, seizures, poor coordination and broad-based gait, macrocephaly and mild dysmorphic features (such as narrow palpebral fissures, malar hypoplasia and thin upper lips), eczema, ocular abnormalities and a social personality.","definition_xrefs":["Orphanet:369950"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-seizures-macrocephaly-obesity syndrome","secondary_identifiers":["UMLS:C4749455","GARD:21583","MEDGEN:1650833"],"synonyms":[{"name":"Der(8)t(8;12)","type":"exact"}],"termid":"MONDO:0018248","xrefs":{"Monarch":{"xref_id":"0018248"}}}


id: FYPO:0007143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-deoxyribonuclease (pyrimidine dimer) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}


id: PBO:0057599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 936","termid":"PBO:0057599"}


id: PBO:0004754
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds TR-BOX 5'-TTCTTTGTT-3'","termid":"PBO:0004754"}


id: PBO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm3","termid":"PBO:0005108"}


id: GO:0030421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expulsion of feces from the rectum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defecation","secondary_identifiers":["Wikipedia:Defecation"],"termid":"GO:0030421"}


id: PBO:0084446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; deletion suppresses mutation of mpt5; DSF1 has a paralog, MAN2, that arose from a segmental duplication","termid":"PBO:0084446"}


id: GO:0046047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TTP, ribosylthymine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate catabolic process","termid":"GO:0009210"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TTP metabolic process","termid":"GO:0046046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"TTP catabolic process","synonyms":[{"name":"TTP breakdown","type":"exact"},{"name":"TTP catabolism","type":"exact"},{"name":"TTP degradation","type":"exact"},{"name":"TTP hydrolysis","type":"exact"}],"termid":"GO:0046047"}


id: MOD:01150
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a nedd8 protein.","definition_xrefs":["PubMed:12612601","PubMed:11125103","PubMed:18688235"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"neddylated lysine","termid":"MOD:01150"}


id: PR:O13936
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00424","PANTHER:PTHR11125:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.19","secondary_identifiers":["UniProtKB:O13936"],"synonyms":[{"name":"Spom972h-SUPT5H","type":"exact"},{"name":"chromatin elongation factor spt5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13936"}


id: MONDO:0013276
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86537],"is_not":false,"summary":null,"term":"MONDO:0013276"}]},"cv_name":"mondo","definition":"An autoimmune disorder characterized by the association of primary biliary cirrhosis (PBC) with limited cutaneous systemic sclerosis (lcSSc).","definition_xrefs":["Orphanet:779"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Reynolds syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:450547","OMIM:613471","icd11.foundation:1409844299","SCTID:715401008","UMLS:C0748397","GARD:4697"],"synonyms":[{"name":"Reynolds syndrome","type":"exact"},{"name":"primary biliary cirrhosis and systemic scleroderma","type":"exact"},{"name":"primary biliary cirrhosis, Scleroderma, Raynaud disease, and telangiectasia","type":"related"}],"termid":"MONDO:0013276","terms_by_termid":{"MONDO:0013276":null},"xrefs":{"Monarch":{"xref_id":"0013276"}}}


id: FYPO:0002214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with abnormal morphology (i.e. size, shape, or structure).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, abnormal germ tube morphology (obsolete FYPO:0002214)","synonyms":[{"name":"cell population inviable after spore germination, abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore population, abnormal germ tube morphology","type":"exact"},{"name":"inviable population of undivided germinated spores with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0002214"}


id: PBO:0081659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 583","termid":"PBO:0081659"}


id: GO:0047218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumarate + UDP-D-glucose = 4-O-beta-D-glucosyl-4-hydroxycinnamate + UDP. Also acts on ferulate, caffeate and sinapate, forming a mixture of 4-glucosides and glucose esters.","definition_xrefs":["EC:2.4.1.126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"hydroxycinnamate 4-beta-glucosyltransferase activity","secondary_identifiers":["RHEA:21636","MetaCyc:2.4.1.126-RXN"],"synonyms":[{"name":"UDP-glucose-hydroxycinnamate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hydroxycinnamoyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxycinnamate glucosyltransferase activity","type":"related"}],"termid":"GO:0047218"}


id: PBO:0067743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 42","termid":"PBO:0067743"}


id: PBO:0049237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM7 antisense RNA 1","termid":"PBO:0049237"}


id: PBO:0079628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q1","termid":"PBO:0079628"}


id: PBO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein beta","termid":"PBO:0044008"}


id: GO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of thymocyte death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte apoptotic process","synonyms":[{"name":"regulation of immature T cell apoptosis","type":"related"},{"name":"regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070243"}


id: MONDO:0006189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with eccrine differentiation arising from the sweat glands. It may arise de novo or as a malignant transformation of a pre-existing poroma. It usually grows in the legs, buttocks, feet, and trunk and usually presents as an ulcerative plaque. It is characterized by the presence of intraepidermal and dermal nests of malignant epithelial cells. It may recur after excision and metastasize to the lymph nodes and less frequently to distal anatomic sites.","definition_xrefs":["NCIT:C5560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eccrine porocarcinoma","secondary_identifiers":["EFO:1000229","MESH:D057090","SCTID:254708001","ONCOTREE:POCA","ICDO:8409/3","DOID:7566","MEDGEN:266098","UMLS:C1266065"],"synonyms":[{"name":"eccrine porocarcinoma","type":"exact"},{"name":"eccrine porocarcinoma of skin","type":"related"},{"name":"epidermotropic eccrine carcinoma","type":"exact"},{"name":"malignant eccrine poroma","type":"exact"},{"name":"porocarcinoma","type":"exact"},{"name":"porocarcinoma/spiroadenocarcinoma","type":"related"}],"termid":"MONDO:0006189","xrefs":{"Monarch":{"xref_id":"0006189"}}}


id: PBO:0089549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Vid27 family, conserved in fungi and plants","termid":"PBO:0089549"}


id: PBO:0002709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-24(28) sterol reductase Sts1","termid":"PBO:0002709"}


id: FYPO:0004121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the import of protein into the nucleus is normal (i.e. indistinguishable from wild type). Import of all proteins or a specific protein may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear import","termid":"FYPO:0000516"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein import into nucleus during vegetative growth","synonyms":[{"name":"normal nucleocytoplasmic protein import during vegetative growth","type":"related"},{"name":"normal protein import into nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004121"}


id: PBO:0088983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein with predicted signal peptide","termid":"PBO:0088983"}


id: GO:0004844
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67453],"is_not":false,"summary":null,"term":"GO:0004844"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine.","definition_xrefs":["GOC:pr","GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"uracil DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-110215","Reactome:R-HSA-9817512","Reactome:R-HSA-110217","EC:3.2.2.27"],"synonyms":[{"name":"uracil-DNA glycosylase activity","type":"exact"}],"termid":"GO:0004844","terms_by_termid":{"GO:0004844":null}}


id: PBO:0027938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glucose_consumption","termid":"PBO:0027938"}


id: PBO:0054299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1690","termid":"PBO:0054299"}


id: PBO:0063001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestagen associated endometrial protein pseudogene 1","termid":"PBO:0063001"}


id: SO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small (184-nt in E. coli) RNA that forms a hairpin type structure. 6S RNA associates with RNA polymerase in a highly specific manner. 6S RNA represses expression from a sigma70-dependent promoter during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_6S","secondary_identifiers":["http://en.wikipedia.org/wiki/6S_RNA"],"synonyms":[{"name":"6S RNA","type":"exact"},{"name":"RNA 6S","type":"exact"}],"termid":"SO:0000376"}


id: MONDO:0014609
data:
  {"annotated_genes":["SJAG_02238"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85642],"is_not":false,"summary":null,"term":"MONDO:0014609"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02238":null},"genotype_count":0,"is_obsolete":false,"name":"cognitive impairment - coarse facies - heart defects - obesity - pulmonary involvement - short stature - skeletal dysplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616368","MEDGEN:894554","SCTID:764455002","UMLS:C4085597","Orphanet:444077","GARD:12845"],"synonyms":[{"name":"CHOPS","type":"related"},{"name":"CHOPS syndrome","type":"exact"},{"name":"cognitive impairment, coarse facies, heart defects, obesity, pulmonary involvement, short stature, and skeletal dysplasia","type":"related"}],"termid":"MONDO:0014609","terms_by_termid":{"MONDO:0014609":null},"xrefs":{"Monarch":{"xref_id":"0014609"}}}


id: GO:0047031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diethyl (2R,3R)-2-methyl-3-hydroxysuccinate + NADP+ = diethyl 2-methyl-3-oxosuccinate + H+ + NADPH.","definition_xrefs":["RHEA:21008","EC:1.1.1.229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diethyl 2-methyl-3-oxosuccinate reductase activity","secondary_identifiers":["MetaCyc:1.1.1.229-RXN","KEGG_REACTION:R04387"],"synonyms":[{"name":"diethyl-(2R,3R)-2-methyl-3-hydroxysuccinate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047031"}


id: GO:0031583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of phospholipase D (PLD) and a subsequent increase in the intracellular concentration of phosphatidic acid (PA).","definition_xrefs":["GOC:mah","GOC:signaling","PMID:11812783","PMID:15924269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase D-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"G-protein signalling, phospholipase D activating pathway","type":"exact"},{"name":"activation of phospholipase D activity by G-protein coupled receptor protein signaling pathway","type":"related"},{"name":"phospholipase D-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0031583"}


id: GO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An nuclear membrane protein complex having arachidonate 5-lipoxygenase activity.","definition_xrefs":["PMID:19075240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"5-lipoxygenase complex","termid":"GO:0002180"}


id: PBO:0003790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 co-chaperone Cdc37","termid":"PBO:0003790"}


id: MONDO:0003361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the small intestine. Representative examples include leiomyosarcoma, angiosarcoma, and Kaposi sarcoma.","definition_xrefs":["NCIT:C5335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"small intestinal sarcoma","secondary_identifiers":["UMLS:C1336007","DOID:5272","MEDGEN:233455"],"synonyms":[{"name":"sarcoma of small bowel","type":"exact"},{"name":"sarcoma of small intestine","type":"exact"},{"name":"sarcoma of the small bowel","type":"exact"},{"name":"sarcoma of the small intestine","type":"exact"},{"name":"sarcoma, small intestinal","type":"exact"},{"name":"small bowel sarcoma","type":"exact"},{"name":"small intestinal sarcoma","type":"exact"},{"name":"small intestine sarcoma","type":"exact"}],"termid":"MONDO:0003361","xrefs":{"Monarch":{"xref_id":"0003361"}}}


id: PATO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001235 strength value (obsolete PATO:0001235)","termid":"PATO:0001235"}


id: SO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Residues which interact with a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand_binding_site","termid":"SO:0001657"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_ligand_contact","secondary_identifiers":["BS:00157"],"synonyms":[{"name":"polypeptide ligand contact","type":"exact"},{"name":"protein-ligand interaction","type":"related"}],"termid":"SO:0001105"}


id: MONDO:0003650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hepatoblastoma characterized by the presence of fetal and embryonal epithelial components and a mesenchymal component.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatoblastoma","termid":"MONDO:0018666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"mixed hepatoblastoma","secondary_identifiers":["NCIT:C7097","ICDO:8970/3","MEDGEN:233194","UMLS:C1334784","DOID:5789"],"synonyms":[{"name":"mixed epithelial and mesenchymal hepatoblastoma","type":"exact"}],"termid":"MONDO:0003650","xrefs":{"Monarch":{"xref_id":"0003650"}}}


id: GO:0010813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neuropeptides. Neuropeptides are signaling peptides that travel across a synaptic junction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"neuropeptide catabolic process","termid":"GO:0010813"}


id: PBO:0054682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2090","termid":"PBO:0054682"}


id: MONDO:0010811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.","definition_xrefs":["NCIT:C2897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia","secondary_identifiers":["ICD9:600.20","MEDGEN:312369","MESH:D011470","UMLS:C1704272","EFO:0000284","HP:0008711","DOID:11132","ICD9:600","ICD9:600.0","OMIM:600082","SCTID:266569009"],"synonyms":[{"name":"BPH","type":"related"},{"name":"benign hyperplasia of prostate","type":"exact"},{"name":"benign hyperplasia of the prostate","type":"exact"},{"name":"benign prostate hyperplasia","type":"exact"},{"name":"benign prostatic Hypertrophy","type":"exact"},{"name":"benign prostatic hyperplasia","type":"exact"},{"name":"benign prostatic hyperplasia (disease)","type":"exact"},{"name":"benign prostatic hyperplasia - BPH","type":"exact"},{"name":"benign prostatic hypertrophy","type":"exact"},{"name":"prostate hypertrophy","type":"broad"},{"name":"prostatic hyperplasia, benign","type":"related"},{"name":"prostatic hypertrophy","type":"broad"}],"termid":"MONDO:0010811","xrefs":{"Monarch":{"xref_id":"0010811"}}}


id: PBO:0014286
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe cyclin C Homology","termid":"PBO:0014286"}


id: MOD:01254
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H labeled dimethylated L-lysine.","definition_xrefs":["PubMed:14670044","OMSSA:189","Unimod:199#K"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6-dimethyl-L-lysine","termid":"MOD:00084"},{"relation_name":"is_a","term_name":"4x(2)H labeled dimethylated residue","termid":"MOD:00552"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(2)H labeled dimethylated L-lysine","synonyms":[{"name":"DiMethyl-CHD2","type":"related"},{"name":"Dimethyl:2H(4)","type":"related"},{"name":"mod189","type":"exact"}],"termid":"MOD:01254"}


id: PBO:0040025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 1","termid":"PBO:0040025"}


id: PBO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte myelin glycoprotein","termid":"PBO:0061867"}


id: PBO:0067146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 196, pseudogene","termid":"PBO:0067146"}


id: MOD:01991
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycinium (protonated glycine) residue to an N,N,N-trimethylglycine.","definition_xrefs":["PubMed:23978223","ChEBI:17750","PubMed:23818633","RESID:AA0619"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated glycine (glycinium) residue","termid":"MOD:01990"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine (from glycinium)","synonyms":[{"name":"N2Me3Gly","type":"exact"}],"termid":"MOD:01991"}


id: MONDO:0012387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by sclerosing bone dysplasia, ichthyosis vulgaris and premature ovarian failure. The bone disorder affects all metaphyseal-diaphyseal regions of the long bones, the skull, and the metacarpals.","definition_xrefs":["Orphanet:75325"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"osteosclerosis-ichthyosis-premature ovarian failure syndrome","secondary_identifiers":["MEDGEN:355875","SCTID:722114007","OMIM:609993","GARD:9904","UMLS:C1864942","MESH:C536064"],"synonyms":[{"name":"osteosclerosis with ichthyosis and POF","type":"related"},{"name":"osteosclerosis with ichthyosis and premature ovarian failure","type":"related"},{"name":"sclerosing dysplasia of bone with ichthyosis and premature ovarian failure","type":"related"},{"name":"sclerosing dysplasia of bone-ichthyosis-premature ovarian failure syndrome","type":"exact"}],"termid":"MONDO:0012387","xrefs":{"Monarch":{"xref_id":"0012387"}}}


id: GO:0034522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-1,2-dihydroxy-1,2-dihydro-8-carboxynaphthalene = 1,2-dihydroxy-8-carboxynaphthalene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-1,2-dihydroxy-1,2-dihydro-8-carboxynaphthalene dehydrogenase activity (obsolete GO:0034522)","termid":"GO:0034522"}


id: GO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH2 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["Prosite:PS01258","PMID:12133724","PMID:11048732","PMID:9020082","PMID:9704409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"BH2 domain binding","termid":"GO:0051433"}


id: PBO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor 1","termid":"PBO:0060662"}


id: GO:1900762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of averantin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"averantin catabolic process","synonyms":[{"name":"averantin breakdown","type":"exact"},{"name":"averantin catabolism","type":"exact"},{"name":"averantin degradation","type":"exact"}],"termid":"GO:1900762"}


id: MOD:01919
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to (2S,3S)-3-hydroxyaspartic acid.","definition_xrefs":["RESID:AA0579","ChEBI:138111","PubMed:21177872","ChEBI:10696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxy-L-aspartic acid","termid":"MOD:01926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3S)-3-hydroxyaspartic acid","synonyms":[{"name":"(2S,3S)-2-amino-3-hydroxybutanedioic acid","type":"exact"},{"name":"(2S,3S)-3-hydroxyaspartic acid","type":"exact"},{"name":"(3S)-3-hydroxy-L-aspartic acid","type":"exact"},{"name":"2-amino-3-hydroxysuccinic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanedioic acid","type":"exact"},{"name":"3-hydroxyaspartic acid","type":"exact"},{"name":"L-threo-3-hydroxyaspartic acid","type":"exact"},{"name":"L-threo-beta-hydroxyaspartic acid","type":"exact"},{"name":"MOD_RES (3S)-3-hydroxyaspartate","type":"exact"}],"termid":"MOD:01919"}


id: PR:Q9UTR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sil1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1071.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.03c","synonyms":[{"name":"Spom972h-sil1","type":"exact"}],"termid":"PR:Q9UTR0"}


id: PBO:0057212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378b","termid":"PBO:0057212"}


id: PATO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Acyclic cyclicity inheres in a molecule when the atoms within the molecule do not contain at least one cycle in the atom-atom connection paths (through the bonds).","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclicity","termid":"PATO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyclic cyclicity","termid":"PATO:0002185"}


id: MONDO:0004854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the conjunctiva in a newborn due to chemical or infectious causes. Aseptic conjunctivitis is often related to the use of prophylactic medications for infectious conjunctivitis. Septic conjunctivitis is related to perinatal exposure to microorganisms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal conjunctivitis","termid":"MONDO:0015455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ophthalmia neonatorum","secondary_identifiers":["UMLS:C0029076","DOID:9699","SCTID:34298002","NCIT:C116815","MEDGEN:14489","MESH:D009878","ICD9:771.6"],"synonyms":[{"name":"gonococcal conjunctivitis (neonatorum)","type":"exact"},{"name":"gonococcal ophthalmia neonatorum","type":"related"},{"name":"neonatal conjunctivitis","type":"exact"}],"termid":"MONDO:0004854","xrefs":{"Monarch":{"xref_id":"0004854"}}}


id: PBO:0074575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 31","termid":"PBO:0074575"}


id: PBO:0109936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 like RNA helicase 1","termid":"PBO:0109936"}


id: PBO:0064889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bgamma","termid":"PBO:0064889"}


id: PBO:0016535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic glycine-tRNA ligase Grs1","termid":"PBO:0016535"}


id: GO:1902871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:mr","PMID:16872597","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of amacrine cell differentiation","termid":"GO:1902869"},{"relation_name":"positively_regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amacrine cell differentiation","synonyms":[{"name":"activation of amacrine cell differentiation","type":"narrow"},{"name":"activation of amacrine neuron differentiation","type":"narrow"},{"name":"positive regulation of amacrine neuron differentiation","type":"exact"},{"name":"up regulation of amacrine cell differentiation","type":"exact"},{"name":"up regulation of amacrine neuron differentiation","type":"exact"},{"name":"up-regulation of amacrine cell differentiation","type":"exact"},{"name":"up-regulation of amacrine neuron differentiation","type":"exact"},{"name":"upregulation of amacrine cell differentiation","type":"exact"},{"name":"upregulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902871"}


id: PBO:0063378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin","termid":"PBO:0063378"}


id: MONDO:1012422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exfoliative cutaneous lupus erythematosus, non-human animal","termid":"MONDO:1011756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exfoliative cutaneous lupus erythematosus, dog","secondary_identifiers":["OMIA:001609-9615"],"termid":"MONDO:1012422","xrefs":{"Monarch":{"xref_id":"1012422"}}}


id: PATO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity when it possesses at least one ring that is aromatic, i.e. A conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromaticity","termid":"PATO:0002190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic","termid":"PATO:0002191"}


id: MONDO:0017134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odonto-onycho dysplasia-alopecia syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by almost total alopecia with only sparse, thin, brittle, slow-growing scalp hair, fair and sparse eyebrows and eyelashes, absent axillary and pubic hair, fragile and brittle fingernails, thick and brittle toenails (both with a subungual corneal layer), hypodontia, microdontia, widely spaced teeth with hypoplastic enamel, mild palmoplantar keratosis, cafe-au-lait spots and areolae anomalies. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:2722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odonto-onycho dysplasia-alopecia syndrome","secondary_identifiers":["GARD:4051","UMLS:C4706599","MEDGEN:1648007"],"synonyms":[{"name":"odonto onycho dysplasia with alopecia","type":"related"}],"termid":"MONDO:0017134","xrefs":{"Monarch":{"xref_id":"0017134"}}}


id: PBO:0087881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator of pseudohyphal growth; protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1) and C. albicans Wor1","termid":"PBO:0087881"}


id: PBO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase Idp1 (predicted)","termid":"PBO:0001945"}


id: GO:0098781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transcription of non (protein) coding RNA from a DNA template.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA transcription (obsolete GO:0098781)","termid":"GO:0098781"}


id: MONDO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADCY6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 8","secondary_identifiers":["UMLS:C4225385","MEDGEN:896058","OMIM:616287","GARD:18565"],"synonyms":[{"name":"ADCY6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS8","type":"related"},{"name":"lethal congenital contracture syndrome 8","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADCY6","type":"exact"},{"name":"lethal congenital contracture syndrome type 8","type":"exact"}],"termid":"MONDO:0014570","xrefs":{"Monarch":{"xref_id":"0014570"}}}


id: MONDO:0010558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choroideremia-deafness-obesity syndrome is an X-linked retinal dystrophy characterized by choroideremia, causing in affected males progressive nyctalopia and eventual central blindness. Obesity, moderate intellectual disability and congenital mixed (sensorineural and conductive) deafness are also observed. Female carriers show typical retinal changes indicative of the choroideremia carrier state.","definition_xrefs":["Orphanet:1435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroideremia-deafness-obesity syndrome","secondary_identifiers":["MESH:C537793","OMIM:303110","GARD:369","MEDGEN:763933","SCTID:717761005","UMLS:C3551019"],"synonyms":[{"name":"Ayazi syndrome","type":"exact"},{"name":"Xq21 deletion syndrome, X-linked recessive","type":"exact"},{"name":"choroideremia deafness obesity","type":"related"},{"name":"choroideremia, deafness, and intellectual disability","type":"related"},{"name":"choroideremia, deafness, and mental retardation","type":"related"},{"name":"choroideremia, obesity, and congenital deafness","type":"related"},{"name":"chromosome Xq21 deletion syndrome","type":"related"}],"termid":"MONDO:0010558","xrefs":{"Monarch":{"xref_id":"0010558"}}}


id: PBO:0057054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 139","termid":"PBO:0057054"}


id: MONDO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vagus nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve disorder","secondary_identifiers":["UMLS:C0152179","MEDGEN:101824","SCTID:73765005","ICD9:352.3","MESH:D020421","DOID:12491","NCIT:C27591"],"synonyms":[{"name":"Vagus nerve disorder","type":"exact"},{"name":"disease of vagus nerve","type":"exact"},{"name":"disease or disorder of vagus nerve","type":"exact"},{"name":"disorder of pneumogastric [10th] nerve","type":"exact"},{"name":"disorder of vagal nerve","type":"exact"},{"name":"disorder of vagus nerve","type":"exact"},{"name":"vagus nerve disease","type":"exact"},{"name":"vagus nerve disease or disorder","type":"exact"}],"termid":"MONDO:0001535","xrefs":{"Monarch":{"xref_id":"0001535"}}}


id: PBO:0050580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 4","termid":"PBO:0050580"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: PBO:0089179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA acetyltransferase Tan1","termid":"PBO:0089179"}


id: PBO:0116675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 6","termid":"PBO:0116675"}


id: PBO:0077669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 14","termid":"PBO:0077669"}


id: PBO:0076471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF family member associated NFKB activator","termid":"PBO:0076471"}


id: PR:O14240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eaf6 gene.","definition_xrefs":["UniProtKB:O14240","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein eaf6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.09","synonyms":[{"name":"Spom972h-eaf6","type":"exact"}],"termid":"PR:O14240"}


id: MONDO:0014222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"activated PI3K-delta syndrome","termid":"MONDO:0018338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency 14","secondary_identifiers":["OMIM:615513","GARD:15979","MEDGEN:811535","DOID:0111936","UMLS:C3714976","NORD:111933"],"synonyms":[{"name":"Activated PI3K-Delta syndrome","type":"related"},{"name":"Activated Phosphoinositide 3-Kinase Delta Syndrome (APDS)","type":"exact"},{"name":"IMD14","type":"related"},{"name":"immunodeficiency 14","type":"exact"},{"name":"immunodeficiency 14A, autosomal dominant","type":"exact"},{"name":"immunodeficiency type 14","type":"exact"},{"name":"p110-Delta-Activating mutation causing senescent T cells, lymphadenopathy, and immunodeficiency","type":"related"}],"termid":"MONDO:0014222","xrefs":{"Monarch":{"xref_id":"0014222"}}}


id: GO:0035344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hypoxanthine, 6-hydroxypurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"hypoxanthine transport","synonyms":[{"name":"6-hydroxypurine transport","type":"exact"},{"name":"hypoxanthine transmembrane transport","type":"exact"}],"termid":"GO:0035344"}


id: PBO:0075246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 16","termid":"PBO:0075246"}


id: MONDO:0021463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the parathyroid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"tumor of parathyroid gland","termid":"MONDO:0021360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of parathyroid gland","secondary_identifiers":["DOID:60008","ICD10CM:D35.1","SCTID:92272009","UMLS:C0154041","MEDGEN:57814","icd11.foundation:455097662","NCIT:C3630","ICD9:227.1"],"synonyms":[{"name":"benign neoplasm of parathyroid","type":"exact"},{"name":"benign neoplasm of the parathyroid","type":"exact"},{"name":"benign neoplasm of the parathyroid gland","type":"exact"},{"name":"benign parathyroid gland neoplasm","type":"exact"},{"name":"benign parathyroid gland tumor","type":"exact"},{"name":"benign parathyroid gland tumour","type":"exact"},{"name":"benign parathyroid neoplasm","type":"exact"},{"name":"benign parathyroid tumor","type":"exact"},{"name":"benign parathyroid tumour","type":"exact"},{"name":"benign tumor of parathyroid","type":"exact"},{"name":"benign tumor of parathyroid gland","type":"exact"},{"name":"benign tumor of the parathyroid","type":"exact"},{"name":"benign tumor of the parathyroid gland","type":"exact"},{"name":"benign tumour of parathyroid","type":"exact"},{"name":"benign tumour of parathyroid gland","type":"exact"},{"name":"benign tumour of the parathyroid","type":"exact"},{"name":"benign tumour of the parathyroid gland","type":"exact"},{"name":"parathyroid gland benign neoplasm","type":"exact"},{"name":"parathyroid tumor benign","type":"exact"},{"name":"parathyroid tumour benign","type":"exact"}],"termid":"MONDO:0021463","xrefs":{"Monarch":{"xref_id":"0021463"}}}


id: GO:0009153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleotide biosynthetic process","synonyms":[{"name":"purine deoxyribonucleotide anabolism","type":"exact"},{"name":"purine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"purine deoxyribonucleotide formation","type":"exact"},{"name":"purine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009153"}


id: MONDO:0009523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichstenstein syndrome is characterized by frequent infections associated with osteoporosis, a tendency for fractures and osseous anomalies. It has been described in two monozygotic twin brothers. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Lichtenstein syndrome","secondary_identifiers":["UMLS:C1855502","SCTID:763668009","GARD:3248","MEDGEN:340889","MESH:C535894","OMIM:246550"],"synonyms":[{"name":"Lichtenstein syndrome","type":"exact"},{"name":"neutropenia immunoglobulin deficiency peculiar facies and bony anomalies","type":"related"}],"termid":"MONDO:0009523","xrefs":{"Monarch":{"xref_id":"0009523"}}}


id: MONDO:1012523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sudden acquired retinal degeneration syndrome, non-human animal","termid":"MONDO:1012000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden acquired retinal degeneration syndrome, dog","secondary_identifiers":["OMIA:002169-9615"],"termid":"MONDO:1012523","xrefs":{"Monarch":{"xref_id":"1012523"}}}


id: PBO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 192","termid":"PBO:0042120"}


id: MONDO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete radial loop, plain, on right index finger (obsolete MONDO:0044264)","secondary_identifiers":["OMIM:312200"],"synonyms":[{"name":"radial loop, plain, ON right index finger","type":"related"}],"termid":"MONDO:0044264","xrefs":{"Monarch":{"xref_id":"0044264"}}}


id: MOD:01100
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMP (hydroxymethylphenyl)/TFA adduct","termid":"MOD:01100"}


id: PBO:0073634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 20, pseudogene","termid":"PBO:0073634"}


id: PBO:0065144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin receptor","termid":"PBO:0065144"}


id: PR:G2TRJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.21","synonyms":[{"name":"Spom972h-coa3","type":"exact"},{"name":"transcripts altered in meiosis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ9"}


id: PR:Q9UTQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc2 gene.","definition_xrefs":["UniProtKB:Q9UTQ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit spc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.04c","synonyms":[{"name":"Spom972h-spc2","type":"exact"},{"name":"microsomal signal peptidase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ9"}


id: MONDO:0019295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other dermis disorder (obsolete MONDO:0019295)","termid":"MONDO:0019295","xrefs":{"Monarch":{"xref_id":"0019295"}}}


id: PBO:0086600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is increased greatly during sporulation; YEL023C is not an essential gene","termid":"PBO:0086600"}


id: GO:1903092
data:
  {"annotated_genes":["SJAG_02962","SJAG_02152","SJAG_03808","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90481,90482,117772,119052],"is_not":false,"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The process in which pyridoxine is transported across a membrane.","definition_xrefs":["PMID:15701794","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine transport","termid":"GO:0031923"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"pyridoxine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903092","terms_by_termid":{"GO:1903092":null}}


id: SO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is polycistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_transcript","synonyms":[{"name":"polycistronic transcript","type":"exact"}],"termid":"SO:0000078"}


id: PBO:0063413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 1B","termid":"PBO:0063413"}


id: GO:1903914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of fusion of virus membrane with host plasma membrane","termid":"GO:1903913"},{"relation_name":"negatively_regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"},{"relation_name":"negatively_regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"down regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down regulation of viral-cell fusion molecule activity","type":"related"},{"name":"down-regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down-regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down-regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down-regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down-regulation of viral-cell fusion molecule activity","type":"related"},{"name":"downregulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"downregulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"downregulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"downregulation of viral penetration via membrane fusion","type":"exact"},{"name":"downregulation of viral-cell fusion molecule activity","type":"related"},{"name":"inhibition of fusion of virus membrane with host plasma membrane","type":"narrow"},{"name":"inhibition of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"inhibition of viral envelope fusion with host cell membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host plasma membrane","type":"narrow"},{"name":"inhibition of viral penetration via membrane fusion","type":"narrow"},{"name":"inhibition of viral-cell fusion molecule activity","type":"related"},{"name":"negative regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"negative regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"negative regulation of viral penetration via membrane fusion","type":"exact"},{"name":"negative regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903914"}


