# terms

id: GO:0008253
data:
  {"annotated_genes":["SJAG_02959","SJAG_02582","SJAG_03096","SJAG_02593","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90887,94694,114015,114016],"is_not":false,"summary":null,"term":"GO:0008253"},{"annotations":[70166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-109470","Reactome:R-HSA-109291","Reactome:R-HSA-74248","Reactome:R-HSA-109415","Reactome:R-HSA-109480","Reactome:R-HSA-109387","Reactome:R-HSA-5694126","Reactome:R-HSA-8940070","Reactome:R-HSA-109514","MetaCyc:5-NUCLEOTID-RXN","Reactome:R-HSA-109449","Reactome:R-HSA-109278","RHEA:12484","Reactome:R-HSA-109380","Reactome:R-HSA-9755078","Reactome:R-HSA-8940074"],"synonyms":[{"name":"5' nucleotidase activity","type":"exact"},{"name":"5'-AMP nucleotidase","type":"narrow"},{"name":"5'-AMPase","type":"narrow"},{"name":"5'-adenylic phosphatase","type":"narrow"},{"name":"5'-mononucleotidase activity","type":"related"},{"name":"5'-ribonucleotide phosphohydrolase activity","type":"related"},{"name":"AMP phosphatase","type":"narrow"},{"name":"AMP phosphohydrolase","type":"narrow"},{"name":"AMPase","type":"narrow"},{"name":"UMPase","type":"narrow"},{"name":"adenosine 5'-phosphatase","type":"narrow"},{"name":"adenosine monophosphatase","type":"narrow"},{"name":"snake venom 5'-nucleotidase","type":"narrow"},{"name":"thimidine monophosphate nucleotidase","type":"narrow"},{"name":"uridine 5'-nucleotidase","type":"narrow"}],"termid":"GO:0008253","terms_by_termid":{"GO:0008253":null,"GO:0050483":null}}


id: MONDO:0000902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corpus callosum agenesis-neuropathy is a neurodegenerative disorder characterized by severe progressive sensorimotor neuropathy beginning in infancy with resulting hypotonia, areflexia, amyotrophy and variable degrees of dysgenesis of the corpus callosum. Additional features include mild-to-severe intellectual and developmental delays, and psychiatric manifestations that include paranoid delusions, depression, hallucinations, and \\\"autistic-like\\\" features. Affected individuals are usually wheelchair restricted in the second decade of life and die in the third decade of life. The disease is inherited as an autosomal recessive trait.","definition_xrefs":["Orphanet:1496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"agenesis of the corpus callosum with peripheral neuropathy","secondary_identifiers":["MESH:C536446","UMLS:C0795950","DOID:0060600","GARD:1537","MEDGEN:162893","SCTID:702439002","DOID:0090003","OMIM:218000"],"synonyms":[{"name":"ACCPN","type":"related"},{"name":"Andermann syndrome","type":"exact"},{"name":"Charlevoix disease","type":"exact"},{"name":"HMSN/ACC","type":"related"},{"name":"agenesis of corpus callosum with neuronopathy","type":"related"},{"name":"agenesis of corpus callosum with peripheral neuropathy","type":"related"},{"name":"agenesis of corpus callosum with polyneuropathy","type":"related"},{"name":"agenesis of the corpus callosum with peripheral neuropathy","type":"exact"},{"name":"corpus callosum agenesis neuronopathy","type":"related"},{"name":"corpus callosum agenesis-neuronopathy syndrome","type":"exact"},{"name":"corpus callosum, agenesis of, with neuronopathy","type":"related"},{"name":"hereditary motor and sensory neuropathy with agenesis of the corpus callosum","type":"exact"},{"name":"peripheral neuropathy associated with agenesis of the corpus callosum","type":"exact"},{"name":"polyneuropathy, sensorimotor, with or without agenesis of the corpus callosum","type":"related"}],"termid":"MONDO:0000902","xrefs":{"Monarch":{"xref_id":"0000902"}}}


id: MONDO:0009084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conductive deafness-ptosis-skeletal anomalies syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by conductive hearing loss due to atresia of the external auditory canal and the middle ear complicated by chronic infection, ptosis and skeletal anomalies (internal rotation of hips, dislocation of the radial heads and fifth finger clinodactyly). In addition, a thin, pinched nose, delayed hair growth and dysplastic teeth are associated. There have been no further descriptions in the literature since 1978.","definition_xrefs":["Orphanet:3236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"conductive deafness-ptosis-skeletal anomalies syndrome","secondary_identifiers":["MESH:C535993","UMLS:C1857340","GARD:305","SCTID:763213001","OMIM:221320","MEDGEN:347428"],"synonyms":[{"name":"Jackson Barr syndrome","type":"related"},{"name":"Jackson-Barr syndrome","type":"exact"},{"name":"deafness conductive ptosis skeletal anomalies","type":"related"},{"name":"deafness, conductive, with ptosis and skeletal anomalies","type":"related"}],"termid":"MONDO:0009084","xrefs":{"Monarch":{"xref_id":"0009084"}}}


id: PBO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF4-CCPG1 readthrough (NMD candidate)","termid":"PBO:0045136"}


id: PBO:0030337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_nitrogen_starvation","termid":"PBO:0030337"}


id: MONDO:0038261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic neurological channelopathy of the central nervous system (obsolete MONDO:0038261)","secondary_identifiers":["Orphanet:98743"],"termid":"MONDO:0038261","xrefs":{"Monarch":{"xref_id":"0038261"}}}


id: MONDO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thyroid disease, susceptibility to, 3","secondary_identifiers":["MEDGEN:374932","OMIM:608175","UMLS:C1842444"],"synonyms":[{"name":"AITD3","type":"related"},{"name":"autoimmune thyroid disease, susceptibility to, 3","type":"exact"},{"name":"autoimmune thyroid disease, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0011982","xrefs":{"Monarch":{"xref_id":"0011982"}}}


id: GO:1900564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ergot alkaloid metabolic process","termid":"GO:0035836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"chanoclavine-I metabolic process","synonyms":[{"name":"chanoclavine-I metabolism","type":"exact"}],"termid":"GO:1900564"}


id: GO:0097723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of an amoeboid sperm cell.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amoeboid sperm motility","synonyms":[{"name":"ameboid sperm motility","type":"exact"},{"name":"ameboid sperm movement","type":"exact"},{"name":"amoeboid sperm movement","type":"exact"}],"termid":"GO:0097723"}


id: MONDO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis (obsolete MONDO:0002151)","termid":"MONDO:0002151","xrefs":{"Monarch":{"xref_id":"0002151"}}}


id: PBO:0082798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic","termid":"PBO:0082798"}


id: GO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine 5'-triphosphate,3'-diphosphate + H2O = guanosine 5'-diphosphate,3'-diphosphate + phosphate.","definition_xrefs":["EC:3.6.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity","secondary_identifiers":["MetaCyc:PPPGPPHYDRO-RXN","RHEA:13073"],"synonyms":[{"name":"guanosine 5'-triphosphate 3'-diphosphate 5'-phosphatase activity","type":"related"},{"name":"guanosine 5'-triphosphate-3'-diphosphate 5'-phosphohydrolase activity","type":"related"},{"name":"guanosine pentaphosphatase activity","type":"related"},{"name":"guanosine pentaphosphate phosphatase activity","type":"related"},{"name":"guanosine pentaphosphate phosphohydrolase activity","type":"related"},{"name":"guanosine-5'-triphosphate,3'-diphosphate 5'-phosphohydrolase activity","type":"related"},{"name":"guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase activity","type":"exact"},{"name":"pppGpp 5'-phosphohydrolase activity","type":"related"}],"termid":"GO:0008894"}


id: PBO:0060318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomaker, myoblast fusion factor","termid":"PBO:0060318"}


id: GO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smaller branches of an axon that emanate from the main axon cylinder.","definition_xrefs":["NIF_Subcellular:sao1470140754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon collateral","termid":"GO:0044303"}


id: MONDO:0010213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive genetic disorder caused by mutations in the DDB2 gene. This disease exhibits the mildest degree of sun sensitivity of all xeroderma pigmentosum complementation groups, although individuals are at high risk for skin cancer.","definition_xrefs":["NCIT:C114771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum group E","secondary_identifiers":["SCTID:56048001","MESH:C564732","DOID:0110846","UMLS:C1848411","MEDGEN:341219","Orphanet:276261","GARD:5627","OMIM:278740"],"synonyms":[{"name":"XP group E","type":"exact"},{"name":"XP, Group E","type":"related"},{"name":"XP-E","type":"exact"},{"name":"XP5","type":"exact"},{"name":"XPE","type":"exact"},{"name":"XPe","type":"related"},{"name":"xeroderma pigmentosum 5","type":"related"},{"name":"xeroderma pigmentosum V","type":"exact"},{"name":"xeroderma pigmentosum group E","type":"exact"},{"name":"xeroderma pigmentosum group type E","type":"exact"},{"name":"xeroderma pigmentosum, complementation group E","type":"related"},{"name":"xeroderma pigmentosum, complementation group type E","type":"exact"},{"name":"xeroderma pigmentosum, group E, DDB-negative subtype","type":"exact"},{"name":"xeroderma pigmentosum, type 5","type":"related"}],"termid":"MONDO:0010213","xrefs":{"Monarch":{"xref_id":"0010213"}}}


id: PBO:0042585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration related 1","termid":"PBO:0042585"}


id: MONDO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete crater-like holes of optic disk (obsolete MONDO:0001679)","secondary_identifiers":["DOID:13295","ICD9:377.22"],"synonyms":[{"name":"crater-like optic disk holes","type":"exact"}],"termid":"MONDO:0001679","xrefs":{"Monarch":{"xref_id":"0001679"}}}


id: PBO:0080871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YLP motif containing 1","termid":"PBO:0080871"}


id: MONDO:0016865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kleefstra syndrome","termid":"MONDO:0012455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kleefstra syndrome due to a point mutation","secondary_identifiers":["Orphanet:261652","MEDGEN:1826146","UMLS:C5680724","GARD:17253"],"termid":"MONDO:0016865","xrefs":{"Monarch":{"xref_id":"0016865"}}}


id: MONDO:0005073
data:
  {"annotated_genes":["SJAG_03453","SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"}]},"cv_name":"mondo","definition":"A neoplasm composed of melanocytes that usually appears as a dark spot on the skin.","definition_xrefs":["NCIT:C7570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"melanocytic skin neoplasm","termid":"MONDO:0021583"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02855":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanocytic nevus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0027962","MEDGEN:14364","EFO:0009675","MESH:D009506","SCTID:400096001","Wikipedia:Nevus"],"synonyms":[{"name":"melanocytic Nevus","type":"exact"},{"name":"melanotic Nevus","type":"exact"},{"name":"mole","type":"exact"},{"name":"mole of skin","type":"exact"},{"name":"nevus","type":"exact"}],"termid":"MONDO:0005073","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0005073"}}}


id: MONDO:0700258
data:
  {"annotated_genes":["SJAG_01884"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"}]},"cv_name":"mondo","definition":"Any type 1 interferonopathies in which the cause of the disease is a variation in the RNASEH2C gene. Individuals with variants in RNASEH2C can present with a variety of phenotypes, including Aicardi-Goutieres syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01884":null},"genotype_count":0,"is_obsolete":false,"name":"RNASEH2C-related type 1 interferonopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700258","terms_by_termid":{"MONDO:0012471":null},"xrefs":{"Monarch":{"xref_id":"0700258"}}}


id: PBO:0038294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_database","termid":"PBO:0038294"}


id: PBO:0027829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ascospore_release_from_ascus","termid":"PBO:0027829"}


id: PBO:0065827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6B, member RAS oncogene family","termid":"PBO:0065827"}


id: MONDO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridogoniodysgenesis and skeletal anomalies","secondary_identifiers":["UMLS:C1836074","MEDGEN:373009","OMIM:609515","MESH:C535534"],"synonyms":[{"name":"iridogoniodysgenesis and skeletal anomalies","type":"exact"}],"termid":"MONDO:0012288","xrefs":{"Monarch":{"xref_id":"0012288"}}}


id: GO:0072414
data:
  {"annotated_genes":["SJAG_00082","SJAG_01805","SJAG_03048","SJAG_01837","SJAG_04332","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116978,111511,94145,90341,102699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[102711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[94881,102712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072473","GO:0072455"],"synonyms":[{"name":"mitotic G2/M transition checkpoint effector process","type":"related"},{"name":"mitotic cell cycle G1/S checkpoint effector process","type":"related"},{"name":"mitotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to mitotic G2/M transition checkpoint signal","type":"related"},{"name":"response to mitotic cell cycle G1/S checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle G1/S checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072414","terms_by_termid":{"GO:0072435":null,"GO:0140429":null,"GO:1990820":null}}


id: PR:O94523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA desaturase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.06c","synonyms":[{"name":"Spom972h-SPCC1281.06c","type":"exact"},{"name":"delta(9)-desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-9 desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"fatty acid desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"stearoyl-CoA desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94523"}


id: SO:0002120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transcript where ditag (digital gene expression profiling)and/or published experimental data strongly supports the existence of short non-coding transcripts transcribed from the 3'UTR.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_overlapping_ncrna","synonyms":[{"name":"3'_overlapping_ncrna","type":"exact"},{"name":"3prime_overlapping_ncRNA","type":"exact"},{"name":"three prime overlapping noncoding rna","type":"exact"}],"termid":"SO:0002120"}


id: FYPO:0006303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:1903478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring","termid":"FYPO:0002699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006303"}


id: PBO:0064454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with KRAB domain","termid":"PBO:0064454"}


id: GO:0045299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear.","definition_xrefs":["GOC:dsf","PMID:15581873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith mineralization","termid":"GO:0045299"}


id: PBO:0089696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular 5'-nucleotidase, human NT5E family","termid":"PBO:0089696"}


id: MONDO:0023147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome caused by HPIV-3.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"},{"relation_name":"is_a","term_name":"parainfluenza virus type 3 infectious disease","termid":"MONDO:0042974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal parainfluenza virus type 3 syndrome","secondary_identifiers":["GARD:2309"],"synonyms":[{"name":"Human respirovirus 3 caused infectious embryofetopathy","type":"exact"},{"name":"Human respirovirus 3 infectious embryofetopathy","type":"exact"}],"termid":"MONDO:0023147","xrefs":{"Monarch":{"xref_id":"0023147"}}}


id: PBO:0110380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 6","termid":"PBO:0110380"}


id: GO:0061768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Na+(in) + Mg2+(out) = Na+(out) + Mg2+(in).","definition_xrefs":["PMID:22031603","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"magnesium ion transmembrane transporter activity","termid":"GO:0015095"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"magnesium:sodium antiporter activity","termid":"GO:0061768"}


id: PBO:0069815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1101, pseudogene","termid":"PBO:0069815"}


id: PBO:0000588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase (predicted)","termid":"PBO:0000588"}


id: PBO:0029304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall","termid":"PBO:0029304"}


id: PBO:0000618
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bloom's syndrome","termid":"PBO:0000618"}


id: PBO:0004718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb7","termid":"PBO:0004718"}


id: PBO:0056846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-6-methylguanine-DNA methyltransferase","termid":"PBO:0056846"}


id: PBO:0039236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 1","termid":"PBO:0039236"}


id: GO:0097141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BIM-BCL-2 complex","termid":"GO:0097141"}


id: MONDO:0019861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroid hypoplasia is a form of thyroid dysgenesis characterized by incomplete development of the thyroid gland that results in primary congenital hypothyroidism, a permanent thyroid deficiency that is present from birth.","definition_xrefs":["Orphanet:95720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized resistance to thyroid hormone","termid":"MONDO:0009043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid hypoplasia","secondary_identifiers":["UMLS:C0151516","GARD:8426","MedDRA:10065938","icd11.foundation:936952450","MEDGEN:57720"],"termid":"MONDO:0019861","xrefs":{"Monarch":{"xref_id":"0019861"}}}


id: PBO:0003124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase (predicted)","termid":"PBO:0003124"}


id: MONDO:0004743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious metabolic condition caused by mutations in the MTHFR gene, medications, or nutritional deficiency. It results in increased levels of homocysteine in the blood. Patients with this condition are at an increased risk for recurrent blood clots formation and cardiovascular accidents.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperhomocysteinemia","secondary_identifiers":["MESH:D020138","UMLS:C0598608","SCTID:419503008","GARD:8230","NCIT:C84770","DOID:9279","MEDGEN:108623","OMIM:603174"],"synonyms":[{"name":"homocysteinemia","type":"exact"},{"name":"hyperhomocysteinemia","type":"exact"}],"termid":"MONDO:0004743","xrefs":{"Monarch":{"xref_id":"0004743"}}}


id: PBO:0044418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP2U1 and SGMS2 antisense RNA 1","termid":"PBO:0044418"}


id: PBO:0041849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent serine protein kinase pseudogene 1","termid":"PBO:0041849"}


id: GO:0031957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very long-chain fatty acid + ATP + CoA = a very long-chain fatty acyl-CoA + AMP + diphosphate. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:18024425","RHEA:54536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"very long-chain fatty acid-CoA ligase activity","secondary_identifiers":["Reactome:R-HSA-5695957","Reactome:R-HSA-5696007","Reactome:R-HSA-8875077","Reactome:R-HSA-9914143"],"synonyms":[{"name":"very-long-chain fatty acid activation","type":"related"},{"name":"very-long-chain fatty acid-CoA ligase activity","type":"exact"},{"name":"very-long-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031957"}


id: PBO:0079404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 7 pseudogene","termid":"PBO:0079404"}


id: PBO:0040215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 2B","termid":"PBO:0040215"}


id: PR:000027586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P08965-1, Ser-438, MOD:00046|Thr-527, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/Phos(S438,T527)","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: meiosis protein mei2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mei2/Phos:1","type":"exact"},{"name":"mei2/Phos(S438,T527)","type":"exact"}],"termid":"PR:000027586"}


id: PBO:0068217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 524","termid":"PBO:0068217"}


id: PBO:0028495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_via_N-end_rule_pathway_during_vegetative_growth","termid":"PBO:0028495"}


id: GO:0015950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleotide is synthesized from another purine nucleotide.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleotide interconversion","termid":"GO:0015950"}


id: PBO:0071916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 1","termid":"PBO:0071916"}


id: MOD:01657
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form N6-Dabsyl-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Dabsyl derivatized lysine","synonyms":[{"name":"N6-[4-([4-(dimethylamino)phenyl]diazenyl)benzenesulfonyl]lysine","type":"exact"},{"name":"N6DabsylLys","type":"exact"}],"termid":"MOD:01657"}


id: GO:0090691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that specifies plant organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of plant organ boundary","termid":"GO:0090691"}


id: GO:0060069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with the positioning of the mitotic spindle.","definition_xrefs":["PMID:11532397","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"establishment of mitotic spindle localization","termid":"GO:0040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"Wnt signaling pathway, regulating spindle positioning","synonyms":[{"name":"Wnt receptor signaling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt receptor signalling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt-activated signaling pathway, regulating spindle positioning","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"broad"}],"termid":"GO:0060069"}


id: PBO:0077421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 160","termid":"PBO:0077421"}


id: GO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress (obsolete GO:0061403)","termid":"GO:0061403"}


id: GO:0042286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-4-amino-5-oxopentanoate = 5-aminolevulinate.","definition_xrefs":["RHEA:14265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase activity","secondary_identifiers":["EC:5.4.3.8","KEGG_REACTION:R02272","MetaCyc:GSAAMINOTRANS-RXN"],"synonyms":[{"name":"(S)-4-amino-5-oxopentanoate 4,5-aminomutase activity","type":"related"},{"name":"glutamate-1-semialdehyde aminotransferase activity","type":"related"}],"termid":"GO:0042286"}


id: MONDO:0019663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short rib-polydactyly syndrome, Saldino-Noonan type (obsolete MONDO:0019663)","termid":"MONDO:0019663","xrefs":{"Monarch":{"xref_id":"0019663"}}}


id: PBO:0091474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase, implicated in vitamin metabolism, or cellular detoxification","termid":"PBO:0091474"}


id: PBO:0062329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 68","termid":"PBO:0062329"}


id: PBO:0063531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZK1 interacting protein 1","termid":"PBO:0063531"}


id: FYPO:0001078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal beta-glucan level","synonyms":[{"name":"normal beta-D-glucan level","type":"exact"},{"name":"normal beta-glucan accumulation","type":"related"},{"name":"normal beta-glucan level during mitotic cell cycle","type":"related"},{"name":"normal beta-glucan level during vegetative growth","type":"exact"},{"name":"normal cellular beta-glucan level","type":"exact"}],"termid":"FYPO:0001078"}


id: PBO:0076373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 1","termid":"PBO:0076373"}


id: MONDO:0016599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of secondary polycythemia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant secondary polycythemia (obsolete MONDO:0016599)","secondary_identifiers":["Orphanet:247511"],"synonyms":[{"name":"autosomal dominant secondary erythrocytosis","type":"exact"},{"name":"secondary polycythemia, autosomal dominant","type":"exact"}],"termid":"MONDO:0016599","xrefs":{"Monarch":{"xref_id":"0016599"}}}


id: PBO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 15","termid":"PBO:0075262"}


id: MONDO:1011129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delayed or abolished puberty in male pigs due to a variation in the KISS1 gene.","definition_xrefs":["PMID:36685939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism, KISS1-related, pig","secondary_identifiers":["OMIA:002619-9823"],"termid":"MONDO:1011129","xrefs":{"Monarch":{"xref_id":"1011129"}}}


id: PBO:0083559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene PMT1/YDL095W; YDL096C is not essential","termid":"PBO:0083559"}


id: PBO:0071360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 19","termid":"PBO:0071360"}


id: PBO:0050908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 1","termid":"PBO:0050908"}


id: SO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 28S rRNA is an RNA component of the large subunit of cytosolic ribosomes in metazoan eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_28S_gene","termid":"SO:0002239"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_28S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/28S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 28S LSU rRNA","type":"exact"},{"name":"cytosolic 28S rRNA","type":"exact"},{"name":"cytosolic 28S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 28S","type":"exact"}],"termid":"SO:0000653"}


id: GO:1903441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary membrane.","definition_xrefs":["GOC:TermGenie","PMID:22139371","GO_REF:0000087","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ciliary membrane","synonyms":[{"name":"protein localisation in ciliary membrane","type":"exact"},{"name":"protein localisation to ciliary membrane","type":"exact"},{"name":"protein localization in ciliary membrane","type":"exact"}],"termid":"GO:1903441"}


id: GO:0046576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of rhamnogalacturonan, generating oligosaccharides of the form alpha-D-us-galacturonic acid-(1,2)-alpha-L-rhamnose-(1,4)-alpha-D-galacturonate-(1,2)-L-rhamnose-(1,2)-alpha-L-rhamnose-p-(1,4)-alpha-D-galacturonic acid, terminating at the non-reducing end with a hex-4-enopyranosyluronic acid residue.","definition_xrefs":["PMID:8720076","PMID:8587995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rhamnogalacturonan alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide lyase activity","synonyms":[{"name":"rhamnogalacturonase B activity","type":"exact"}],"termid":"GO:0046576"}


id: PR:000085722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:37459529"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me3(K36)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-37, MOD:00083","type":"narrow"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-37, MOD:00083","type":"narrow"},{"name":"hht3/Me3(K36)","type":"exact"}],"termid":"PR:000085722"}


id: MONDO:0010165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulna hypoplasia - intellectual deficit is a very rare syndrome characterized by mesomelic shortness of the forearms, bilateral clubfeet, aplasia or hypoplasia of all nails and severe psychomotor retardation.","definition_xrefs":["Orphanet:2249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulna hypoplasia-intellectual disability syndrome","secondary_identifiers":["OMIM:276821","MEDGEN:341275","MESH:C564757","GARD:5398","UMLS:C1848650"],"synonyms":[{"name":"bilateral ulnar hypoplasia and intellectual disability","type":"related"},{"name":"bilateral ulnar hypoplasia and mental retardation","type":"related"},{"name":"mesomelia of the upper limbs, absent nails, clubfeet, and intellectual disability","type":"related"},{"name":"mesomelia of the upper limbs, absent nails, clubfeet, and mental retardation","type":"related"},{"name":"mesomelia of the upper limbs, anonychia congenita, clubfeet, and intellectual disability","type":"related"},{"name":"mesomelia of the upper limbs, anonychia congenita, clubfeet, and mental retardation","type":"related"},{"name":"ulna hypoplasia with intellectual disability","type":"related"},{"name":"ulna hypoplasia with mental retardation","type":"related"},{"name":"ulnar hypoplasia with intellectual disability","type":"related"},{"name":"ulnar hypoplasia with mental retardation","type":"related"}],"termid":"MONDO:0010165","xrefs":{"Monarch":{"xref_id":"0010165"}}}


id: GO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of endothelial cell migration.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of endothelial cell migration (obsolete GO:0044328)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of endothelial cell migration","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of endothelial cell migration","type":"exact"}],"termid":"GO:0044328"}


id: GO:0035755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cardiolipin (1,3-bis(3-phosphatidyl)glycerol), releasing phosphatidic acid (PA).","definition_xrefs":["GOC:sp","PMID:17028579","PMID:21397848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cardiolipin hydrolase activity","secondary_identifiers":["Reactome:R-HSA-8954398"],"termid":"GO:0035755"}


id: GO:0036243
data:
  {"annotated_genes":["SJAG_00674","SJAG_03293"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87786,88764],"is_not":false,"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate semialdehyde + NADP+ + H2O = succinate + NADPH + 2 H+.","definition_xrefs":["GOC:bf","RHEA:13213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-semialdehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0009013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.79","MetaCyc:SUCCSEMIALDDEHYDROG-RXN"],"synonyms":[{"name":"NADP-dependent succinate-semialdehyde dehydrogenase activity","type":"related"},{"name":"succinate semialdehyde:NADP+ oxidoreductase activity","type":"related"},{"name":"succinic semialdehyde dehydrogenase (NADP+) activity","type":"related"},{"name":"succinyl semialdehyde dehydrogenase (NADP+) activity","type":"related"}],"termid":"GO:0036243","terms_by_termid":{"GO:0036243":null}}


id: MONDO:0017365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kindler syndrome","termid":"MONDO:0008260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary acrokeratotic poikiloderma, Weary type","secondary_identifiers":["MEDGEN:96059","icd11.foundation:837824031","UMLS:C0406556","Orphanet:2907","GARD:18781"],"synonyms":[{"name":"congenital poikiloderma with bullae, Weary type","type":"exact"}],"termid":"MONDO:0017365","xrefs":{"Monarch":{"xref_id":"0017365"}}}


id: GO:0016886
data:
  {"annotated_genes":["SJAG_02527","SJAG_00956","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72631,80445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"},{"annotations":[74161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003972"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules, or two groups within a single molecule, via a phosphoric ester bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.5.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00956":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming phosphoric ester bonds","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016886","terms_by_termid":{"GO:0003910":null,"GO:0003972":null}}


id: MONDO:0020771
data:
  {"annotated_genes":["SJAG_02242","SJAG_04418","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86969,86968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null,"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0021190","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1846574","MEDGEN:337609","OMIMPS:607250"],"synonyms":[{"name":"SCAN","type":"exact"}],"termid":"MONDO:0020771","terms_by_termid":{"MONDO:0011801":null,"MONDO:0018996":null},"xrefs":{"Monarch":{"xref_id":"0020771"}}}


id: PBO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad1","termid":"PBO:0002785"}


id: MONDO:1012307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous papillomatosis, non-human animal","termid":"MONDO:1011741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous papillomatosis, cattle","secondary_identifiers":["OMIA:001147-9913"],"termid":"MONDO:1012307","xrefs":{"Monarch":{"xref_id":"1012307"}}}


id: SO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls in an intergenic region that is 1 kb or less between 2 genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_1kb_variant","synonyms":[{"name":"ANNOVAR:upstream;downstream","type":"exact"}],"termid":"SO:0002074"}


id: PBO:0073819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 20","termid":"PBO:0073819"}


id: GO:1990677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that promotes the biogenesis of mitochondrial F1Fo-ATP synthase by facilitating assembly of the peripheral stalk. Loss of INAC function causes dissociation of the F1-domain from the membrane-integral Fo-portion.","definition_xrefs":["PMID:24942160","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial inner membrane assembly complex","synonyms":[{"name":"INAC complex","type":"exact"},{"name":"inner membrane assembly complex","type":"broad"},{"name":"mitochondrion inner membrane assembly complex","type":"exact"}],"termid":"GO:1990677"}


id: PBO:0049055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 55","termid":"PBO:0049055"}


id: FYPO:0009044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of sodium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to sodium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to sodium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to sodium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009044"}


id: PBO:0074306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX9 ribosome biogenesis factor","termid":"PBO:0074306"}


id: SO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one of the bases in the terminator codon is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator_codon_variant","secondary_identifiers":["SO:0001625","loinc:LA6700-2","http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"VAT:endOverlap","type":"exact"},{"name":"terminal codon variant","type":"exact"},{"name":"terminal_codon_variant","type":"exact"},{"name":"terminator codon variant","type":"exact"}],"termid":"SO:0001590"}


id: PBO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-14, pseudogene","termid":"PBO:0052870"}


id: FYPO:0007802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form linear element that are shorter than normal.","definition_xrefs":["PMID:33825974","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element morphology","termid":"FYPO:0004585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"short linear element","synonyms":[{"name":"decreased linear element length","type":"exact"},{"name":"reduced linear element length","type":"exact"}],"termid":"FYPO:0007802"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_04640","SJAG_03023","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76312,79318],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[92009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225544","GOC:krc","PMID:15225542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: CHEBI:142517
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of (−)-borneol. A metabolite isolated from Ferula dissecta.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tschimganine","termid":"CHEBI:142517"}


id: RO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shares_ancestor_with","termid":"RO:0002158"}


id: PBO:0091670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal5h2","termid":"PBO:0091670"}


id: GO:0033081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation in thymus","synonyms":[{"name":"regulation of T cell development in thymus","type":"related"},{"name":"regulation of thymic T cell differentiation","type":"exact"},{"name":"regulation of thymocyte cell differentiation","type":"exact"},{"name":"regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033081"}


id: PBO:0091694
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdr1-Related Transcription factor","termid":"PBO:0091694"}


id: MONDO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hereditary ataxia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary ataxia (obsolete MONDO:0015956)","termid":"MONDO:0015956","xrefs":{"Monarch":{"xref_id":"0015956"}}}


id: MONDO:0005955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scrub typhus (obsolete MONDO:0005955)","termid":"MONDO:0005955","xrefs":{"Monarch":{"xref_id":"0005955"}}}


id: MONDO:0036915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the ovary and is characterized by the presence of neoplastic epithelium that resembles the epithelium of the endocervix or gastrointestinal tract. It includes mucinous adenofibroma, mucinous cystadenofibroma, and mucinous cystadenoma.","definition_xrefs":["NCIT:C40039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ovarian mucinous tumor","secondary_identifiers":["UMLS:C1511100","MEDGEN:267038"],"synonyms":[{"name":"benign ovarian mucinous neoplasm","type":"exact"},{"name":"benign ovarian mucinous tumor","type":"exact"},{"name":"ovarian mucinous neoplasm, benign","type":"exact"}],"termid":"MONDO:0036915","xrefs":{"Monarch":{"xref_id":"0036915"}}}


id: PR:P08647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ras1 gene.","definition_xrefs":["UniProtKB:P08647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.09c","synonyms":[{"name":"Spom972h-ras1","type":"exact"}],"termid":"PR:P08647"}


id: PBO:0050163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 19","termid":"PBO:0050163"}


id: PBO:0077007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 9","termid":"PBO:0077007"}


id: GO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland development","termid":"GO:0030878"}


id: MONDO:0022468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn errors of metabolism disorder caused by homozygosity for mutations in the TAP2 gene. It is characterizeed by nonhealing, chronic, ulcerative granulomatous leg lesions combined with recurrent otitis media and sinopulmonary infections.","definition_xrefs":["PMID:23662797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"antigen-peptide-transporter 2 deficiency","secondary_identifiers":["GARD:732"],"synonyms":[{"name":"TAP 2 deficiency","type":"related"},{"name":"antigen processing (TAP) deficiency syndrome","type":"exact"}],"termid":"MONDO:0022468","xrefs":{"Monarch":{"xref_id":"0022468"}}}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: MONDO:8000019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertigo, benign recurrent, 1","secondary_identifiers":["UMLS:C2749845","MESH:C567620","MEDGEN:412807"],"synonyms":[{"name":"BRV1","type":"exact"},{"name":"vertigo, benign recurrent, 1","type":"exact"}],"termid":"MONDO:8000019","xrefs":{"Monarch":{"xref_id":"8000019"}}}


id: PBO:0066409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT like 1","termid":"PBO:0066409"}


id: PBO:0029897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination_during_vegetative_growth","termid":"PBO:0029897"}


id: FYPO:0003508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mercury ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on mercury","synonyms":[{"name":"normal cell population growth in presence of mercury","type":"exact"},{"name":"normal cell population growth on mercury","type":"exact"},{"name":"normal cell population growth on mercury ion","type":"exact"},{"name":"normal cellular response to mercury","type":"related"},{"name":"normal growth on mercury ions","type":"exact"},{"name":"normal vegetative cell population growth on mercury","type":"exact"}],"termid":"FYPO:0003508"}


id: GO:1990485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactate (2-hydroxypropanoic acid) in the absence of oxygen.","definition_xrefs":["PMID:11133436","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate catabolic process","termid":"GO:1903457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"anaerobic lactate catabolic process","synonyms":[{"name":"anaerobic lactic acid catabolic process","type":"related"}],"termid":"GO:1990485"}


id: PBO:0027950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_flocculation_in_stationary_phase","termid":"PBO:0027950"}


id: GO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to organonitrogen compound (obsolete GO:0071417)","synonyms":[{"name":"cellular response to organic nitrogen","type":"exact"}],"termid":"GO:0071417"}


id: PBO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-Like ATPase (predicted)","termid":"PBO:0002320"}


id: GO:0070715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-dependent, movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sodium-dependent organic cation transport","termid":"GO:0070715"}


id: MONDO:1010042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protein-losing enteropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-losing enteropathy, non-human animal","secondary_identifiers":["OMIA:001325"],"termid":"MONDO:1010042","xrefs":{"Monarch":{"xref_id":"1010042"}}}


id: GO:0051466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"activation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"positive regulation of CRF secretion","type":"exact"},{"name":"positive regulation of CRH secretion","type":"exact"},{"name":"positive regulation of corticotropin-releasing factor secretion","type":"exact"},{"name":"stimulation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"up regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"up-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"upregulation of corticotropin-releasing hormone secretion","type":"exact"}],"termid":"GO:0051466"}


id: MONDO:0012166
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86546],"is_not":false,"summary":null,"term":"MONDO:0012166"}]},"cv_name":"mondo","definition":"Any hereditary ataxia in which the cause of the disease is a mutation in the RNF170 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"sensory ataxia","termid":"MONDO:0100311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant sensory ataxia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837015","MEDGEN:332346","DOID:0111170","OMIM:608984"],"synonyms":[{"name":"ADSA","type":"exact"},{"name":"Adsa","type":"related"},{"name":"RNF170 hereditary ataxia","type":"exact"},{"name":"SNAX1","type":"exact"},{"name":"ataxia, sensory, 1, autosomal dominant","type":"related"},{"name":"hereditary ataxia caused by mutation in RNF170","type":"exact"}],"termid":"MONDO:0012166","terms_by_termid":{"MONDO:0012166":null},"xrefs":{"Monarch":{"xref_id":"0012166"}}}


id: PBO:0004969
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.3","termid":"PBO:0004969"}


id: PR:O14089
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kap104 gene.","definition_xrefs":["UniProtKB:O14089","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.06c","synonyms":[{"name":"Spom972h-kap104","type":"exact"},{"name":"TRN (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Transportin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"importin-104 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit beta-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-104 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14089"}


id: PBO:0068767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 4, pseudogene","termid":"PBO:0068767"}


id: PBO:0057821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3141","termid":"PBO:0057821"}


id: GO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B2","termid":"GO:0033274"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B2","synonyms":[{"name":"cellular response to riboflavin","type":"exact"}],"termid":"GO:0071302"}


id: PBO:0078342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 8-1","termid":"PBO:0078342"}


id: PATO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001170 numerical value (obsolete PATO:0001170)","termid":"PATO:0001170"}


id: MONDO:0003843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm within the cerebral hemisphere often associated with partial or complete agenesis of the corpus callosum.","definition_xrefs":["NCIT:C6220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system lipoma","termid":"MONDO:0003844"},{"relation_name":"is_a","term_name":"benign neoplasm of cerebrum","termid":"MONDO:0021497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral hemisphere lipoma","secondary_identifiers":["DOID:6291","MEDGEN:234111","UMLS:C1332907"],"synonyms":[{"name":"cerebral hemisphere lipoma","type":"exact"},{"name":"lipoma of cerebral hemisphere","type":"exact"},{"name":"lipoma of the cerebral hemisphere","type":"exact"}],"termid":"MONDO:0003843","xrefs":{"Monarch":{"xref_id":"0003843"}}}


id: FYPO:0002426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable germinated spores, and in which some cells divide once and others do not divide. In the cells that divide once, an inviable cell forms from the growing end of the germ tube, but does not divide further.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including divided and undivided germinated spores (obsolete FYPO:0002426)","termid":"FYPO:0002426"}


id: MONDO:0014689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome","secondary_identifiers":["GARD:17778","UMLS:C4225285","DOID:0080592","OMIM:616549","MEDGEN:894399","Orphanet:447974"],"synonyms":[{"name":"KFS4","type":"related"},{"name":"Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome","type":"exact"},{"name":"Klippel-Feil syndrome 4, autosomal recessive, with myopathy and facial dysmorphism","type":"related"},{"name":"Klippel-Feil syndrome 4, autosomal recessive, with nemaline myopathy and facial dysmorphism","type":"related"}],"termid":"MONDO:0014689","xrefs":{"Monarch":{"xref_id":"0014689"}}}


id: PBO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 3","termid":"PBO:0044790"}


id: GO:0052461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity (obsolete GO:0052461)","synonyms":[{"name":"modulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"}],"termid":"GO:0052461"}


id: PBO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 14","termid":"PBO:0062171"}


id: GO:0043015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the microtubule constituent protein gamma-tubulin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulin binding","termid":"GO:0015631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"gamma-tubulin binding","synonyms":[{"name":"gamma tubulin binding","type":"exact"}],"termid":"GO:0043015"}


id: PATO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000714 latency value (obsolete PATO:0000714)","termid":"PATO:0000714"}


id: PBO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-49","termid":"PBO:0051166"}


id: MONDO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the stomach. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C27200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric leiomyosarcoma","secondary_identifiers":["MEDGEN:196652","UMLS:C0744295","DOID:5280","HP:0031025","SCTID:447785000"],"synonyms":[{"name":"gastric leiomyosarcoma","type":"exact"},{"name":"gastric leiomyosarcoma (disease)","type":"exact"},{"name":"leiomyosarcoma of stomach","type":"exact"},{"name":"stomach leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003367","xrefs":{"Monarch":{"xref_id":"0003367"}}}


id: GO:0072178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephric duct are generated and organized. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct morphogenesis","termid":"GO:0072178"}


id: FYPO:0006649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 5'-3' DNA/RNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished 5'-3' DNA/RNA helicase activity","synonyms":[{"name":"5'-3' DNA/RNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0006649"}


id: FYPO:0003089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0000641","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal replication fork arrest at rDNA repeats","synonyms":[{"name":"abnormal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"abnormal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003089"}


id: GO:0048317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the seed are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed morphogenesis","termid":"GO:0048317"}


id: MONDO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skin condition caused by Mycobacterium marinum, characterized by a skin lesion that presents roughly three weeks after exposure.","definition_xrefs":["Wikipedia:Aquarium_granuloma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aquarium granuloma","secondary_identifiers":["MESH:C535526","MEDGEN:78814","UMLS:C0275708","SCTID:240417004"],"synonyms":[{"name":"M. marinum","type":"related"},{"name":"Mycobacterium marinum caused skin disease","type":"exact"},{"name":"Mycobacterium marinum infection","type":"related"},{"name":"Mycobacterium marinum skin disease","type":"exact"},{"name":"aquarium granuloma","type":"exact"},{"name":"fish tank granuloma","type":"exact"},{"name":"swimming pool granuloma","type":"related"}],"termid":"MONDO:0043314","xrefs":{"Monarch":{"xref_id":"0043314"}}}


id: MONDO:0032773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"uridine-cytidineuria","secondary_identifiers":["OMIM:618477","UMLS:C4760647","MEDGEN:1681582"],"synonyms":[{"name":"URCTU","type":"related"},{"name":"URIDINE-CYTIDINEURIA","type":"related"},{"name":"uridine-cytidineuria","type":"exact"}],"termid":"MONDO:0032773","xrefs":{"Monarch":{"xref_id":"0032773"}}}


id: PBO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin (predicted)","termid":"PBO:0004951"}


id: GO:0098009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral terminase complex that contains the translocase and endonuclease activities and allows the translocation of the phage DNA into the procapsid. The large subunit usually assembles as a heterooligomer with the small subunit.","definition_xrefs":["PMID:18687036","GOC:bm","GOC:jh2","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"viral terminase complex","termid":"GO:0043493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase, large subunit","synonyms":[{"name":"virus terminase, large subunit","type":"exact"}],"termid":"GO:0098009"}


id: PR:O74474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.15","synonyms":[{"name":"Spom972h-wtf21","type":"exact"}],"termid":"PR:O74474"}


id: PBO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific splicing","termid":"PBO:0000701"}


id: MONDO:0018253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-facial dysmorphism-hand anomalies syndrome","secondary_identifiers":["MEDGEN:1655582","GARD:21585","UMLS:C4750848","Orphanet:370010"],"termid":"MONDO:0018253","xrefs":{"Monarch":{"xref_id":"0018253"}}}


id: MONDO:0700276
data:
  {"annotated_genes":["SJAG_04934","SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86532,86533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011897"},{"annotations":[86518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"Disorder in which the cause of disease is a variation in the POLR3A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_04934":null},"genotype_count":0,"is_obsolete":false,"name":"POLR3A-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700276","terms_by_termid":{"MONDO:0009910":null,"MONDO:0011897":null},"xrefs":{"Monarch":{"xref_id":"0700276"}}}


id: PBO:0070868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL14 pseudogene 6","termid":"PBO:0070868"}


id: GO:0038067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038067)","synonyms":[{"name":"MAP kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP kinase activity involved in cell wall integrity","type":"related"},{"name":"MAPK activity involved in cell wall biogenesis","type":"narrow"}],"termid":"GO:0038067"}


id: PBO:0089188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein, nucleoside-triphosphate diphosphatase, human ASMTL ortholog","termid":"PBO:0089188"}


id: PBO:0083479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1","termid":"PBO:0083479"}


id: PR:O14353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A biotin--protein ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12835:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin--protein ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.07c","secondary_identifiers":["UniProtKB:O14353"],"synonyms":[{"name":"SPBC30D10.07c","type":"related"},{"name":"Spom972h-HLCS","type":"exact"},{"name":"biotin apo-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14353"}


id: PBO:0084777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein required to initiate mitophagy; recruits the autophagy adaptor protein Atg11p and the ubiquitin-like protein Atg8p to the mitochondrial surface to initiate mitophagy, the selective vacuolar degradation of mitochondria in response to starvation; can promote pexophagy when placed ectopically in the peroxisomal membrane; regulates mitophagy and ethanol production during alcoholic fermentation","termid":"PBO:0084777"}


id: GO:0012510
data:
  {"annotated_genes":["SJAG_04565","SJAG_01809","SJAG_00379","SJAG_04609","SJAG_04517","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113090,62232,78119,113302],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58811,65656],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances between the trans-Golgi network and other parts of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"Golgi-associated vesicle membrane","termid":"GO:0030660"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TGN transport vesicle membrane","type":"exact"},{"name":"trans-Golgi network constitutive secretory pathway transport vesicle membrane","type":"exact"}],"termid":"GO:0012510","terms_by_termid":{"GO:0030121":null,"GO:0030130":null}}


id: PBO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCTN6 divergent transcript","termid":"PBO:0044656"}


id: GO:0004640
data:
  {"annotated_genes":["SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79587],"is_not":false,"summary":null,"term":"GO:0004640"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.","definition_xrefs":["RHEA:21540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylanthranilate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.3.1.24","MetaCyc:PRAISOM-RXN","KEGG_REACTION:R03509"],"synonyms":[{"name":"IGPS:PRAI (indole-3-glycerol-phosphate synthetase/N-5'-phosphoribosylanthranilate isomerase complex)","type":"related"},{"name":"N-(5'-phosphoribosyl)anthranilate isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate aldose-ketose-isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate ketol-isomerase activity","type":"related"},{"name":"PRA isomerase activity","type":"related"},{"name":"PRAI activity","type":"related"}],"termid":"GO:0004640","terms_by_termid":{"GO:0004640":null}}


id: GO:0010239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.","definition_xrefs":["GOC:tb","PMID:9648738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"chloroplast RNA processing","termid":"GO:0031425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"chloroplast mRNA processing","termid":"GO:0010239"}


id: MONDO:0014160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-severe combined immunodeficiency disorder manifesting with recurrent respiratory infections, candidiasis, diarrhea, and failure to thrive. Patients show a clear predisposition to herpes viral infections, and features of immune dysregulation, including hypereosinophilia, vitiligo, and alopecia areata. Other features include lymphadenopathy and hepatosplenomegaly. CD3+ T-cells express TCR- gamma|delta, but little or no TCR-alpha|beta.","definition_xrefs":["DOID:0111977","OMIM:615387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"TCR-alpha-beta-positive T-cell deficiency","secondary_identifiers":["Orphanet:397959","MEDGEN:815662","GARD:17646","UMLS:C3809332"],"synonyms":[{"name":"IMD7","type":"exact"},{"name":"T-cell receptor-ALPHA/BETA deficiency","type":"related"},{"name":"TCR-Alpha/Beta deficiency","type":"related"},{"name":"TCR-alpha-beta+ T-cell deficiency","type":"exact"},{"name":"immunodeficiency 7","type":"related"},{"name":"immunodeficiency 7, TCR-alpha/beta deficient","type":"exact"}],"termid":"MONDO:0014160","xrefs":{"Monarch":{"xref_id":"0014160"}}}


id: FYPO:0004491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at one or more specific sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:17446861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy","synonyms":[{"name":"decreased nucleosome occupancy during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy","type":"exact"}],"termid":"FYPO:0004491"}


id: PR:O74923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.13 gene.","definition_xrefs":["UniProtKB:O74923","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C757.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.13","synonyms":[{"name":"Spom972h-SPCC757.13","type":"exact"}],"termid":"PR:O74923"}


id: GO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host chemokine activity.","definition_xrefs":["GOC:bf","GOC:sp","UniProtKB-KW:KW-1086","VZ:813"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host chemokine activity (obsolete GO:0039553)","synonyms":[{"name":"down-regulation by virus of host chemokine activity","type":"exact"},{"name":"downregulation by virus of host chemokine activity","type":"exact"},{"name":"inhibition by virus of host chemokine activity","type":"narrow"},{"name":"inhibition of host chemokines by virus","type":"narrow"},{"name":"negative regulation by virus of host chemokine activity","type":"exact"}],"termid":"GO:0039553"}


id: PBO:0041453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 62","termid":"PBO:0041453"}


id: PBO:0013814
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as atg14","termid":"PBO:0013814"}


id: GO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast photosystem I.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chloroplast photosystem I binding","termid":"GO:0062067"}


id: GO:0047121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + isoquinoline = AH(2) + isoquinolin-1(2H)-one.","definition_xrefs":["RHEA:11588","EC:1.3.99.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"isoquinoline 1-oxidoreductase activity","secondary_identifiers":["KEGG_REACTION:R05151","MetaCyc:1.3.99.16-RXN"],"synonyms":[{"name":"isoquinoline:acceptor 1-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0047121"}


id: PR:A6X978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.02","synonyms":[{"name":"Spom972h-SPAC9E9.02","type":"exact"}],"termid":"PR:A6X978"}


id: MONDO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical clear cell adenocarcinoma (obsolete MONDO:0003385)","termid":"MONDO:0003385","xrefs":{"Monarch":{"xref_id":"0003385"}}}


id: GO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal amide by hydrolysis and oxidation of an interior peptide in a secreted protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C-terminal amidation (obsolete GO:0018033)","termid":"GO:0018033"}


id: GO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"inclusion body assembly","termid":"GO:0070841"}


id: GO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090264"},{"relation_name":"positively_regulates","term_name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090265"}


id: MONDO:0800453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic epilepsy with onset occurring around puberty. Juvenile absence epilepsy is characterized by sporadic occurrence of absence seizures, frequently associated with a long-life prevalence of generalized tonic-clonic seizures (GTCS) and sporadic myoclonic jerks.","definition_xrefs":["Orphanet:1941"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete adolescent/adult-onset epilepsy syndrome (obsolete MONDO:0100030)","termid":"MONDO:0100030"},{"relation_name":"is_a","term_name":"variable-age onset idiopathic generalized epilepsy syndrome","termid":"MONDO:0800487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"juvenile absence epilepsy","secondary_identifiers":["MEDGEN:1388059","GARD:2162","SCTID:230413002","UMLS:C4317339","DOID:0060172","icd11.foundation:519416529","NCIT:C129868"],"synonyms":[{"name":"JAE","type":"exact"},{"name":"epilepsy juvenile absence","type":"related"}],"termid":"MONDO:0800453","xrefs":{"Monarch":{"xref_id":"0800453"}}}


id: PBO:0012852
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rtt103 Homolog that localizes to the Nucleus","termid":"PBO:0012852"}


id: PBO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 1","termid":"PBO:0045089"}


id: MONDO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a mollusc food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete mollusc allergy (obsolete MONDO:0000798)","secondary_identifiers":["DOID:0060523"],"synonyms":[{"name":"allergy of mollusc food product","type":"exact"},{"name":"mollusc food product allergic disease","type":"exact"}],"termid":"MONDO:0000798","xrefs":{"Monarch":{"xref_id":"0000798"}}}


id: FYPO:0001108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutathione-disulfide reductase activity","termid":"FYPO:0001106"},{"relation_name":"is_a","term_name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased glutathione-disulfide reductase activity","synonyms":[{"name":"increased glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001108"}


id: GO:1901901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cytokinesis.","definition_xrefs":["PMID:22573892","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cytokinesis","synonyms":[{"name":"regulation of protein localisation to cell division site involved in cytokinesis","type":"exact"}],"termid":"GO:1901901"}


id: MONDO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with anal stenosis (obsolete MONDO:0035788)","secondary_identifiers":["Orphanet:601008"],"termid":"MONDO:0035788","xrefs":{"Monarch":{"xref_id":"0035788"}}}


id: GO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminylglycopeptide.","definition_xrefs":["EC:2.4.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.38-RXN","Reactome:R-HSA-2046265","Reactome:R-HSA-975919","Reactome:R-HSA-2025723","Reactome:R-HSA-9035950","RHEA:22932","Reactome:R-HSA-3656230","Reactome:R-HSA-1912352","Reactome:R-HSA-2046298","Reactome:R-HSA-9035949","Reactome:R-HSA-4793956"],"synonyms":[{"name":"GalT activity","type":"related"},{"name":"UDP-galactose--glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyl-transferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyltransferase activity","type":"related"},{"name":"glycoprotein beta-galactosyltransferase activity","type":"related"},{"name":"thyroid galactosyltransferase activity","type":"narrow"},{"name":"thyroid glycoprotein beta-galactosyltransferase","type":"narrow"},{"name":"uridine diphosphogalactose-glycoprotein galactosyltransferase activity","type":"related"}],"termid":"GO:0003831"}


id: GO:0009224
data:
  {"annotated_genes":["SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68208],"is_not":false,"summary":null,"term":"GO:0009224"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CMP, cytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009174"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"CMP metabolic process","termid":"GO:0046035"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"CMP biosynthetic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"CMP anabolism","type":"exact"},{"name":"CMP biosynthesis","type":"exact"},{"name":"CMP formation","type":"exact"},{"name":"CMP synthesis","type":"exact"}],"termid":"GO:0009224","terms_by_termid":{"GO:0009224":null}}


id: PBO:0004055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing protein 1, Bdc1","termid":"PBO:0004055"}


id: GO:0019905
data:
  {"annotated_genes":["SJAG_04909","SJAG_02811","SJAG_03963","SJAG_03499","SJAG_01697","SJAG_02241","SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70128,70332,75680,76741,76927,78370,79995],"is_not":false,"summary":null,"term":"GO:0019905"}]},"cv_name":"molecular_function","definition":"Binding to a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE binding","termid":"GO:0000149"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00826":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02811":null,"SJAG_03499":null,"SJAG_03963":null,"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"syntaxin binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0051535","GO:0030347","GO:0030349","GO:0050430"],"synonyms":[{"name":"syntaxin-13 binding","type":"narrow"},{"name":"syntaxin-2 binding","type":"narrow"},{"name":"syntaxin-5 binding","type":"narrow"},{"name":"syntaxin-6 binding","type":"narrow"}],"termid":"GO:0019905","terms_by_termid":{"GO:0019905":null}}


id: MONDO:0020529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adrenocorticotropic hormone (ACTH) independent Cushing syndrome is a form of endogenous Cushing syndrome (CS) that may result from excess secretion of cortisol by either a unilateral and benign (adrenocortical adenoma: 55-60%) or malignant (adrenocortical carcinoma: 35-40 %) adrenocortical tumor or by bilateral adrenal secretion by macronodular adrenal hyperplasia (AIMAH), as an isolated disease or as part of McCune-Albright syndrome (MAS), or by primary pigmented nodular adrenocortical disease (PPNAD), as an isolated disease or as part of Carney complex (CNC).","definition_xrefs":["Orphanet:99893"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare male infertility due to adrenal disorder (obsolete MONDO:0018387)","termid":"MONDO:0018387"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare female infertility due to an adrenal disorder (obsolete MONDO:0018400)","termid":"MONDO:0018400"},{"relation_name":"is_a","term_name":"Cushing syndrome","termid":"MONDO:0018912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent Cushing syndrome","secondary_identifiers":["Orphanet:647758","MEDGEN:575037","UMLS:C0342443","icd11.foundation:652536990","GARD:19700"],"synonyms":[{"name":"adrenal Cushing syndrome","type":"exact"},{"name":"adrenocorticotropic hormone-independent Cushing syndrome","type":"exact"},{"name":"corticotropin-independent Cushing syndrome","type":"exact"}],"termid":"MONDO:0020529","xrefs":{"Monarch":{"xref_id":"0020529"}}}


id: PBO:0076710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 12","termid":"PBO:0076710"}


id: SO:1001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001266 stop_codon_redefinition_as_selenocysteine (obsolete SO:1001266)","termid":"SO:1001266"}


id: PBO:0039814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 5","termid":"PBO:0039814"}


id: PBO:0081140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP37 zinc finger protein","termid":"PBO:0081140"}


id: GO:0044073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism effects a change in translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host translation (obsolete GO:0044073)","synonyms":[{"name":"modification by symbiont of host translation","type":"exact"},{"name":"modulation of host translation by symbiont","type":"exact"},{"name":"regulation by symbiont of host translation","type":"exact"}],"termid":"GO:0044073"}


id: GO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-ascorbic acid binding","synonyms":[{"name":"L-ascorbate binding","type":"exact"},{"name":"vitamin C binding","type":"exact"}],"termid":"GO:0031418"}


id: PBO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 12, pseudogene","termid":"PBO:0044126"}


id: PR:Q9Y7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L15, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03015","PANTHER:PTHR12934:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.06","secondary_identifiers":["UniProtKB:Q9Y7M5"],"synonyms":[{"name":"Spom972h-MRPL15","type":"exact"}],"termid":"PR:Q9Y7M5"}


id: PBO:0063071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine oxidase","termid":"PBO:0063071"}


id: PBO:0027145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_plasma_membrane,_with_protein_mislocalized_to_cytoplasm,_during_vegetative_growth","termid":"PBO:0027145"}


id: PBO:0005018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain protein Btb1","termid":"PBO:0005018"}


id: PBO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1761 family protein","termid":"PBO:0002194"}


id: MONDO:0030975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 20","secondary_identifiers":["MEDGEN:1808256","OMIM:619938","UMLS:C5677011"],"synonyms":[{"name":"POF20","type":"exact"},{"name":"premature ovarian failure 20","type":"exact"}],"termid":"MONDO:0030975","xrefs":{"Monarch":{"xref_id":"0030975"}}}


id: PBO:0058906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12124","termid":"PBO:0058906"}


id: PBO:0084208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeodomain-containing protein and putative transcription factor; found associated with chromatin; target of SBF transcription factor; induced during meiosis and under cell-damaging conditions; TOS8 has a paralog, CUP9, that arose from the whole genome duplication","termid":"PBO:0084208"}


id: PBO:0089528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2","termid":"PBO:0089528"}


id: MONDO:0008199
data:
  {"annotated_genes":["SJAG_01317","SJAG_01039","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87687,87688],"is_not":false,"summary":null,"term":"MONDO:0008199"},{"annotations":[87651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013625"}]},"cv_name":"mondo","definition":"A Parkinson disease that begins after around the age of 50.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary orthostatic hypotension","termid":"MONDO:0015914"},{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_01039":null,"SJAG_01317":null},"genotype_count":0,"is_obsolete":false,"name":"late-onset Parkinson disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:411602","GARD:17684","DOID:0060892","OMIM:168600","UMLS:C3160718","SCTID:716662004","MEDGEN:463618"],"synonyms":[{"name":"LOPD","type":"exact"},{"name":"PARK","type":"exact"},{"name":"PD","type":"exact"},{"name":"Parkinson disease, age of onset, modifier, Multifactorial","type":"exact"},{"name":"Parkinson disease, late-onset","type":"exact"},{"name":"Parkinson disease, late-onset, susceptibility to, Multifactorial","type":"exact"},{"name":"Parkinson disease, susceptibility to, Multifactorial","type":"exact"},{"name":"autosomal dominant late-onset Parkinson disease","type":"exact"},{"name":"hereditary late onset Parkinson disease","type":"exact"},{"name":"hereditary late-onset Parkinson disease","type":"exact"},{"name":"late onset Parkinson disease","type":"exact"},{"name":"late onset Parkinson's disease","type":"exact"},{"name":"late-onset Parkinson disease","type":"exact"}],"termid":"MONDO:0008199","terms_by_termid":{"MONDO:0008199":null,"MONDO:0013625":null},"xrefs":{"Monarch":{"xref_id":"0008199"}}}


id: FYPO:0001576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"abolished cell population growth on dipeptide nitrogen source","synonyms":[{"name":"abolished dipeptide utilization","type":"related"},{"name":"abolished vegetative cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"cell population growth on dipeptide nitrogen source abolished","type":"exact"}],"termid":"FYPO:0001576"}


id: PBO:0079388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III","termid":"PBO:0079388"}


id: PBO:0060823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 1","termid":"PBO:0060823"}


id: FYPO:0005639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to iron ion starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to iron starvation","type":"exact"},{"name":"normal RNA level during iron ion starvation","type":"exact"},{"name":"normal mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"normal transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0005639"}


id: MOD:00067
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-D-glucuronoylglycine.","definition_xrefs":["PubMed:10858503","PubMed:12716131","PubMed:7398618","PubMed:6493057","RESID:AA0058","OMSSA:50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glucuronylated residue","termid":"MOD:00447"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-D-glucuronoylglycine","synonyms":[{"name":"2-(glucuronoylamino)ethanoic acid","type":"exact"},{"name":"Glucuronyl","type":"related"},{"name":"MOD_RES N-D-glucuronoyl glycine","type":"exact"},{"name":"N-D-glucuronoyl-glycine","type":"exact"},{"name":"N-D-glucuronyl-glycine","type":"exact"},{"name":"NGlcAGly","type":"exact"},{"name":"ntermpepglucuronylg","type":"exact"}],"termid":"MOD:00067"}


id: PBO:0070882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 14","termid":"PBO:0070882"}


id: PBO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 3","termid":"PBO:0062034"}


id: PBO:0026765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_wobble_position_uridine_thiolation","termid":"PBO:0026765"}


id: PBO:0063280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 6","termid":"PBO:0063280"}


id: GO:0070167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biomineral tissue development","termid":"GO:0070167"}


id: PBO:0082195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alkaline dihydroceramidase, involved in sphingolipid metabolism; preferentially hydrolyzes dihydroceramide to a free fatty acid and dihydrosphingosine; has a minor reverse activity; YDC1 has a paralog, YPC1, that arose from the whole genome duplication","termid":"PBO:0082195"}


id: GO:2000130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of octopamine or tyramine signaling pathway","termid":"GO:2000127"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway","synonyms":[{"name":"positive regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000130"}


id: PATO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000703 absolute threshold value (obsolete PATO:0000703)","termid":"PATO:0000703"}


id: GO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 1 signaling pathway","termid":"GO:0034131"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"negative regulation of TLR1 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034132"}


id: PBO:0070210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 138 pseudogene","termid":"PBO:0070210"}


id: MONDO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete median-ulnar nerve communications (obsolete MONDO:0044239)","secondary_identifiers":["OMIM:155150"],"synonyms":[{"name":"Martin-Gruber Median-ulnar anastomosis","type":"related"},{"name":"median-ulnar nerve communications","type":"related"}],"termid":"MONDO:0044239","xrefs":{"Monarch":{"xref_id":"0044239"}}}


id: PBO:0051624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILK associated serine/threonine phosphatase","termid":"PBO:0051624"}


id: MONDO:0018437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myeloid leukemia with NPM1 somatic mutations is a subtype of acute myeloid leukemia with recurrent genetic abnormalities characterized by clonal proliferation of myeloid blasts harboring mutations of the NPM1 gene in the bone marrow, blood and other tissues. It is associated with multilineage dysplasia, involving the myeloid, monocytic, erythroid, and megakaryocytic cell lineages. Patients usually present with leukocytosis, thrombocytosis and nonspecific symptoms related to ineffective hematopoesis (fatigue, bleeding and bruising, recurrent infections, bone pain), with frequent extramedullary involvement typically presenting as gingival hyperplasia and lymphadenopathy.","definition_xrefs":["Orphanet:402026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia with NPM1 somatic mutations","secondary_identifiers":["UMLS:C4706386","MEDGEN:1633725","SCTID:763309005","GARD:21713"],"synonyms":[{"name":"AML with NPM1 somatic mutations","type":"exact"}],"termid":"MONDO:0018437","xrefs":{"Monarch":{"xref_id":"0018437"}}}


id: GO:1902795
data:
  {"annotated_genes":["SJAG_01331"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106630],"is_not":false,"summary":null,"term":"GO:1902795"}]},"cv_name":"biological_process","definition":"The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process mediated by a small interfering RNA.","definition_xrefs":["GO_REF:0000079","PMID:24210919","GOC:TermGenie","PMID:23151475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"},{"relation_name":"is_a","term_name":"siRNA-mediated heterochromatin formation","termid":"GO:0141194"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"siRNA-mediated facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HOOD assembly","type":"exact"},{"name":"HOOD formation","type":"exact"},{"name":"heterochromatin domain assembly","type":"exact"},{"name":"heterochromatin domain formation","type":"exact"},{"name":"siRNA-dependent facultative heterochromatin assembly","type":"exact"},{"name":"siRNA-dependent facultative heterochromatin formation","type":"exact"}],"termid":"GO:1902795","terms_by_termid":{"GO:1902795":null}}


id: GO:0032751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-27 production","termid":"GO:0032671"},{"relation_name":"positively_regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-27 production","secondary_identifiers":["GO:0045539"],"synonyms":[{"name":"activation of interleukin-27 production","type":"narrow"},{"name":"positive regulation of IL-27 production","type":"exact"},{"name":"positive regulation of interleukin-27 anabolism","type":"narrow"},{"name":"positive regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-27 production","type":"narrow"},{"name":"up regulation of interleukin-27 production","type":"exact"},{"name":"up-regulation of interleukin-27 production","type":"exact"},{"name":"upregulation of interleukin-27 production","type":"exact"}],"termid":"GO:0032751"}


id: MONDO:0006637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute renal failure caused by the cell death of the renal tubules. Causes include nephrotoxins, cytotoxic drugs, and antibiotics.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute kidney failure","termid":"MONDO:0002492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute kidney tubular necrosis","secondary_identifiers":["SCTID:35455006","NCIT:C34749","EFO:1000794","MedDRA:10023441","MEDGEN:7213","HP:0008682","MESH:D007683","SCTID:23697004","UMLS:C0022672","DOID:12556","ICD9:584.5"],"synonyms":[{"name":"ATN - acute tubular necrosis","type":"exact"},{"name":"acute renal failure with lesion of tubular necrosis","type":"exact"},{"name":"acute renal failure with tubular necrosis","type":"exact"},{"name":"acute tubular necrosis","type":"exact"},{"name":"acute tubule necrosis","type":"exact"}],"termid":"MONDO:0006637","xrefs":{"Monarch":{"xref_id":"0006637"}}}


id: PR:O42940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.04 gene.","definition_xrefs":["UniProtKB:O42940","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transport protein pho88 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.04","synonyms":[{"name":"Spom972h-SPBC16H5.04","type":"exact"},{"name":"phosphate metabolism protein pho88 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42940"}


id: PBO:0030816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_aconitate_hydratase_activity","termid":"PBO:0030816"}


id: MONDO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arachnoiditis (ARC) is a chronic inflammation of the arachnoid layer of the meninges, of which adhesive arachnoiditis is the most severe form, characterized by debilitating, intractable neurogenic back and limb pain and a range of other neurological problems.","definition_xrefs":["Orphanet:137817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnoiditis","secondary_identifiers":["MESH:D001100","MEDGEN:8175","NORD:800","DOID:12156","UMLS:C0003708","MedDRA:10003074","NCIT:C37913","icd11.foundation:414817254","GARD:5839","SCTID:13980006"],"synonyms":[{"name":"adhesive arachnoiditis","type":"exact"},{"name":"arachnoid mater inflammation","type":"exact"},{"name":"chronic arachnoiditis","type":"exact"},{"name":"inflammation of arachnoid mater","type":"exact"}],"termid":"MONDO:0015304","xrefs":{"Monarch":{"xref_id":"0015304"}}}


id: GO:0071463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a humidity stimulus, moisture in the atmosphere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"},{"relation_name":"is_a","term_name":"cellular response to water stimulus","termid":"GO:0071462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to humidity","termid":"GO:0071463"}


id: GO:2000208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ribosomal subunit export from nucleus","termid":"GO:2000202"},{"relation_name":"is_a","term_name":"regulation of ribosomal small subunit export from nucleus","termid":"GO:2000206"},{"relation_name":"positively_regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"positive regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"positive regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"positive regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000208"}


id: GO:0060975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cardioblast toward the midline to form the heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardioblast migration","termid":"GO:0003260"},{"relation_name":"is_a","term_name":"cell migration to the midline involved in heart development","termid":"GO:0003318"},{"relation_name":"part_of","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast migration to the midline involved in heart field formation","synonyms":[{"name":"cardiac progenitor cell midline migration","type":"exact"},{"name":"cardioblast midline convergence","type":"exact"}],"termid":"GO:0060975"}


id: PBO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0001320"}


id: GO:0090155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"},{"relation_name":"negatively_regulates","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044085"],"is_obsolete":false,"name":"negative regulation of sphingolipid biosynthetic process","secondary_identifiers":["GO:0090157"],"synonyms":[{"name":"negative regulation of sphingolipid biosynthesis involved in cellular sphingolipid homeostasis","type":"related"}],"termid":"GO:0090155"}


id: PBO:0063437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 5A","termid":"PBO:0063437"}


id: FYPO:0003852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing FR901464.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on FR901464","synonyms":[{"name":"normal cell population growth in presence of FR901464","type":"exact"},{"name":"normal cell population growth on FR901464","type":"exact"},{"name":"normal cellular response to FR901464","type":"related"},{"name":"normal vegetative cell population growth on FR901464","type":"exact"}],"termid":"FYPO:0003852"}


id: MONDO:0011480
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86211],"is_not":false,"summary":null,"term":"MONDO:0011480"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the ACTG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604717","UMLS:C1858172","GARD:18111","DOID:0110550","MESH:C565754","MEDGEN:346852"],"synonyms":[{"name":"ACTG1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA20","type":"narrow"},{"name":"DFNA26","type":"narrow"},{"name":"autosomal dominant deafness 20","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 20","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in ACTG1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 20","type":"narrow"},{"name":"deafness, autosomal dominant 20","type":"narrow"},{"name":"deafness, autosomal dominant 20/26","type":"narrow"},{"name":"deafness, autosomal dominant type 20","type":"narrow"}],"termid":"MONDO:0011480","terms_by_termid":{"MONDO:0011480":null},"xrefs":{"Monarch":{"xref_id":"0011480"}}}


id: PR:O60126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA topoisomerase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04045","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.12c","secondary_identifiers":["UniProtKB:O60126"],"synonyms":[{"name":"DNA topoisomerase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-topB","type":"exact"}],"termid":"PR:O60126"}


id: GO:1990235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of diamine N-acetyltransferase activity.","definition_xrefs":["GOC:bhm","PMID:8077207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase complex","termid":"GO:1902493"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"diamine N-acetyltransferase complex","synonyms":[{"name":"SAT complex","type":"narrow"},{"name":"SAT tetramer","type":"narrow"},{"name":"spermidine acetyltransferase complex","type":"narrow"}],"termid":"GO:1990235"}


id: MONDO:0004507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraductal papilloma of the breast characterized by the presence of focal epithelial atypia.","definition_xrefs":["NCIT:C36089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical breast papilloma","secondary_identifiers":["UMLS:C1332346","DOID:8227","MEDGEN:233997"],"synonyms":[{"name":"atypical breast papilloma","type":"exact"}],"termid":"MONDO:0004507","xrefs":{"Monarch":{"xref_id":"0004507"}}}


id: MONDO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatoid adenocarcinoma (obsolete MONDO:0000808)","termid":"MONDO:0000808","xrefs":{"Monarch":{"xref_id":"0000808"}}}


id: SO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-D-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDJ_gene_segment","synonyms":[{"name":"V-D-J-GENE","type":"exact"},{"name":"VDJ gene","type":"exact"}],"termid":"SO:0000574"}


id: PBO:0005854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2 (predicted)","termid":"PBO:0005854"}


id: PR:Q10176
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21049:SF0","PRO:DNx","OMA:SCHPO01795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.07","secondary_identifiers":["UniProtKB:Q10176"],"synonyms":[{"name":"Spom972h-RPN1","type":"exact"},{"name":"oligosaccharyl transferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10176"}


id: MONDO:0044988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the hip.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete hip region disorder (obsolete MONDO:0044988)","secondary_identifiers":["SCTID:118935006"],"synonyms":[{"name":"disease of hip","type":"exact"},{"name":"disease or disorder of hip","type":"exact"},{"name":"disorder of hip","type":"exact"},{"name":"disorder of hip region","type":"exact"},{"name":"hip disease","type":"exact"},{"name":"hip disease or disorder","type":"exact"}],"termid":"MONDO:0044988","xrefs":{"Monarch":{"xref_id":"0044988"}}}


id: GO:0030330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"},{"relation_name":"is_a","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA damage response, signal transduction by p53 class mediator","secondary_identifiers":["GO:0006976"],"synonyms":[{"name":"DNA damage response, activation of p53","type":"related"},{"name":"TP53 signaling pathway","type":"related"},{"name":"p53 signaling pathway","type":"related"},{"name":"p53-mediated DNA damage response","type":"broad"}],"termid":"GO:0030330"}


id: GO:1905535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eukaryotic translation initiation factor 4F complex assembly.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:18426977","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"eukaryotic translation initiation factor 4F complex assembly","termid":"GO:0097010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"regulation of eIF-4F assembly","type":"exact"},{"name":"regulation of eIF4F assembly","type":"exact"}],"termid":"GO:1905535"}


id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: PBO:0063090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 8","termid":"PBO:0063090"}


id: GO:0060106
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cuticle layer that lies directly beneath the lipid-containing epicuticle. The cortical layer contains collagens and insoluble, non-collagenous cuticulins and is characterized by a distinct annular pattern consisting of regularly spaced annular ridges delineated by annular furrows. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["ISSN:15518507","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cortical layer of collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060106"}


id: GO:0000323
data:
  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vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid 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id: GO:0060570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"regulation of peptide hormone processing","termid":"GO:0060568"},{"relation_name":"negatively_regulates","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of peptide hormone processing","termid":"GO:0060570"}


id: PBO:0074290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 5","termid":"PBO:0074290"}


id: PBO:0083467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NOP4/YPL043W","termid":"PBO:0083467"}


id: MONDO:0021218
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the placenta.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"placenta neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0524541","NCIT:C4858","MEDGEN:105551"],"synonyms":[{"name":"neoplasm of placenta","type":"exact"},{"name":"neoplasm of the placenta","type":"exact"},{"name":"placenta neoplasm (disease)","type":"exact"},{"name":"placenta neoplasms","type":"exact"},{"name":"placenta tumor","type":"exact"},{"name":"placenta tumors","type":"exact"},{"name":"placenta tumour","type":"exact"},{"name":"placenta tumours","type":"exact"},{"name":"placental neoplasm","type":"exact"},{"name":"placental tumor","type":"exact"},{"name":"placental tumors","type":"exact"},{"name":"placental tumour","type":"exact"},{"name":"placental tumours","type":"exact"},{"name":"trophoblastic tumor placental site","type":"related"},{"name":"trophoblastic tumour placental site","type":"related"},{"name":"tumor of placenta","type":"exact"},{"name":"tumor of the placenta","type":"exact"},{"name":"tumour of placenta","type":"exact"},{"name":"tumour of the placenta","type":"exact"}],"termid":"MONDO:0021218","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0021218"}}}


id: PR:O14318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php4 gene.","definition_xrefs":["UniProtKB:O14318","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit php4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.01c","synonyms":[{"name":"Spom972h-php4","type":"exact"}],"termid":"PR:O14318"}


id: PBO:0046490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: MONDO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A genetic disease that is the result of one or more abnormal alleles and may be dominant (a single copy of the abnormal allele is sufficient to give rise to the disease), semi-dominant, or recessive (requiring both copies of the gene to have an abnormal allele).","definition_xrefs":["DO:wk,ls","DOID:0050177"],"gene_count":0,"genotype_count":0,"name":"obsolete monogenic disease (obsolete MONDO:0000275)","termid":"MONDO:0000275","xrefs":{"Monarch":{"xref_id":"0000275"}}}


id: GO:0016408
data:
  {"annotated_genes":["SJAG_04972","SJAG_04178","SJAG_00413","SJAG_04107","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[58550,59927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004321"},{"annotations":[79245,77213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02305":null,"SJAG_04107":null,"SJAG_04178":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016408","terms_by_termid":{"GO:0003985":null,"GO:0004321":null,"GO:0004758":null}}


id: PR:Q9US28
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1783.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C1783.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.01","synonyms":[{"name":"Spom972h-SPAC1783.01","type":"exact"}],"termid":"PR:Q9US28"}


id: PBO:0028690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore-specific_spindle_pole_body_remodeling","termid":"PBO:0028690"}


id: PBO:0026916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribosome_biogenesis","termid":"PBO:0026916"}


id: GO:1904087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epiboly involved in gastrulation with mouth forming second.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epiboly involved in gastrulation with mouth forming second","termid":"GO:1904086"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epiboly involved in gastrulation with mouth forming second","synonyms":[{"name":"down regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"down-regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"downregulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"inhibition of epiboly involved in gastrulation with mouth forming second","type":"narrow"}],"termid":"GO:1904087"}


id: FYPO:0007038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion","synonyms":[{"name":"decreased protein localisation to mitochondrion","type":"exact"},{"name":"decreased protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrion during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitochondrion","type":"exact"}],"termid":"FYPO:0007038"}


id: MONDO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute hypersensitivity reaction that occurs from exposure to an allergen. It results from the release of histamine and histamine-like substances from mast cells, and can present with breathing difficulty due to narrowed airways, dizziness and hypotension, skin rash, weak pulse, nausea and vomiting.","definition_xrefs":["NCIT:C107101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"anaphylaxis","secondary_identifiers":["MEDGEN:1373755","SCTID:39579001","UMLS:C4316895","icd11.foundation:1868068711","MESH:D000707","MedDRA:10002198"],"synonyms":[{"name":"anaphylactic shock","type":"exact"},{"name":"systemic anaphylaxis","type":"exact"}],"termid":"MONDO:0100053","xrefs":{"Monarch":{"xref_id":"0100053"}}}


id: PBO:0040186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginase and isoaspartyl peptidase 1","termid":"PBO:0040186"}


id: FYPO:0002223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested in meiosis II. Meiosis II is the second phase of meiosis, in which cells divide and separate the two chromatids in each chromosome.","definition_xrefs":["PomBase:mah","GO:0007135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiosis II","synonyms":[{"name":"abnormal cell cycle arrest in second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002223"}


id: FYPO:0002393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein acetylation during vegetative growth","synonyms":[{"name":"abolished protein acetylation during mitotic cell cycle","type":"related"},{"name":"protein acetylation abolished during vegetative growth","type":"exact"},{"name":"protein acetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002393"}


id: GO:0016103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diterpenoid compounds, terpenoids with four isoprene units.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"diterpenoid catabolic process","synonyms":[{"name":"diterpene catabolic process","type":"narrow"},{"name":"diterpene catabolism","type":"narrow"},{"name":"diterpenoid breakdown","type":"exact"},{"name":"diterpenoid catabolism","type":"exact"},{"name":"diterpenoid degradation","type":"exact"}],"termid":"GO:0016103"}


id: GO:0050117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-alanine + H2O = beta-alanine + acetate.","definition_xrefs":["EC:3.5.1.21","RHEA:23212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0019213","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-beta-alanine deacetylase activity","secondary_identifiers":["KEGG_REACTION:R00909","MetaCyc:N-ACETYL-BETA-ALANINE-DEACETYLASE-RXN"],"synonyms":[{"name":"N-acetyl-beta-alanine amidohydrolase activity","type":"related"}],"termid":"GO:0050117"}


id: PBO:0040127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 13","termid":"PBO:0040127"}


id: PBO:0038646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 1","termid":"PBO:0038646"}


id: GO:0015419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sulfate(out) = ADP + phosphate + sulfate(in).","definition_xrefs":["RHEA:10192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transporter activity","termid":"GO:0015116"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type sulfate transporter activity","secondary_identifiers":["MetaCyc:ABC-70-RXN"],"synonyms":[{"name":"ATPase-coupled sulfate transmembrane transporter activity","type":"related"},{"name":"sulfate ABC transporter","type":"exact"},{"name":"sulfate transmembrane-transporting ATPase activity","type":"related"},{"name":"sulfate-transporting ATPase activity","type":"related"},{"name":"sulfate/thiosulfate porter activity","type":"broad"},{"name":"sulphate transporting ATPase activity","type":"related"}],"termid":"GO:0015419"}


id: GO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Leu-Xaa, Met-Xaa and Phe-Xaa. Hydrolyzes elastin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase II activity (obsolete GO:0004281)","synonyms":[{"name":"pancreatic elastase 2","type":"related"},{"name":"pancreatic elastase II activity","type":"exact"}],"termid":"GO:0004281"}


id: SO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region which is part of the regional centromere outer repeat region.","definition_xrefs":["PMID:16407326","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dg_repeat","synonyms":[{"name":"dg repeat","type":"exact"}],"termid":"SO:0001898"}


id: FYPO:0002725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"decreased alpha-aminoadipate reductase activity","type":"exact"},{"name":"reduced L-aminoadipate-semialdehyde dehydrogenase activity","type":"exact"},{"name":"reduced alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0002725"}


id: GO:0140299
data:
  {"annotated_genes":["SJAG_02187","SJAG_01807","SJAG_02708","SJAG_01620","SJAG_06622","SJAG_02945","SJAG_01587","SJAG_03715","SJAG_03903","SJAG_00792","SJAG_00027","SJAG_02853","SJAG_03828","SJAG_02657","SJAG_03405","SJAG_02183","SJAG_02226","SJAG_02613","SJAG_00331","SJAG_06621","SJAG_01410","SJAG_00642","SJAG_00757","SJAG_02135","SJAG_02267","SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61557,60383,58064,59134,56942,59891,64363,64969,67839,63453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[113169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"},{"annotations":[94403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140482"},{"annotations":[109280,109285,112025,109282,109283,109281,109286,109284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019826"},{"annotations":[95593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140442"},{"annotations":[117836,119279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140550"},{"annotations":[78216,65662,58101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"},{"annotations":[115209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032935"},{"annotations":[103754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to a molecule and eliciting a change in the protein's activity in response to the intracellular level of that molecule.","definition_xrefs":["PMID:26328879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00331":null,"SJAG_00642":null,"SJAG_00757":null,"SJAG_00792":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01587":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_02708":null,"SJAG_02748":null,"SJAG_02853":null,"SJAG_02945":null,"SJAG_03405":null,"SJAG_03715":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"molecular sensor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"small molecular sensor activity","type":"exact"},{"name":"small molecule sensing activity","type":"exact"},{"name":"small molecule sensor activity","type":"narrow"}],"termid":"GO:0140299","terms_by_termid":{"GO:0000155":null,"GO:0019826":null,"GO:0032935":null,"GO:0106219":null,"GO:0140442":null,"GO:0140482":null,"GO:0140550":null,"GO:0140664":null,"GO:0140786":null}}


id: PBO:0031029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_organization","termid":"PBO:0031029"}


id: GO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acyl-D-amino acid = D-amino acid + an acid.","definition_xrefs":["EC:3.5.1.81","MetaCyc:3.5.1.81-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N-acyl-D-amino-acid deacylase activity","secondary_identifiers":["RHEA:18309"],"synonyms":[{"name":"D-aminoacylase activity","type":"related"},{"name":"N-acyl-D-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0047420"}


id: GO:0042866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate biosynthetic process","synonyms":[{"name":"pyruvate anabolism","type":"exact"},{"name":"pyruvate biosynthesis","type":"exact"},{"name":"pyruvate formation","type":"exact"},{"name":"pyruvate synthesis","type":"exact"}],"termid":"GO:0042866"}


id: PBO:0013230
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013230"}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_04474","SJAG_02160","SJAG_04609","SJAG_04569","SJAG_04517","SJAG_01508","SJAG_01025","SJAG_04391","SJAG_00192","SJAG_01809","SJAG_02482","SJAG_04070","SJAG_02282","SJAG_02234","SJAG_04565","SJAG_04002","SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78119,113302,113090,62232],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58811,65656],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[78745,80248,64398,93569,107439,98776,71251,73879,78399],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[96382,98088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01025":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030663":null}}


id: MONDO:0015499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paralytic facial malformation (obsolete MONDO:0015499)","secondary_identifiers":["Orphanet:156224"],"termid":"MONDO:0015499","xrefs":{"Monarch":{"xref_id":"0015499"}}}


id: MONDO:0019352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sporotrichosis (obsolete MONDO:0019352)","termid":"MONDO:0019352","xrefs":{"Monarch":{"xref_id":"0019352"}}}


id: GO:1904751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:BHF","PMID:24415760","GOC:TermGenie","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"positively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to nucleolus","synonyms":[{"name":"activation of protein localisation in nucleolus","type":"narrow"},{"name":"activation of protein localisation to nucleolus","type":"narrow"},{"name":"activation of protein localization in nucleolus","type":"narrow"},{"name":"activation of protein localization to nucleolus","type":"narrow"},{"name":"positive regulation of protein localisation in nucleolus","type":"exact"},{"name":"positive regulation of protein localisation to nucleolus","type":"exact"},{"name":"positive regulation of protein localization in nucleolus","type":"exact"},{"name":"up regulation of protein localisation in nucleolus","type":"exact"},{"name":"up regulation of protein localisation to nucleolus","type":"exact"},{"name":"up regulation of protein localization in nucleolus","type":"exact"},{"name":"up regulation of protein localization to nucleolus","type":"exact"},{"name":"up-regulation of protein localisation in nucleolus","type":"exact"},{"name":"up-regulation of protein localisation to nucleolus","type":"exact"},{"name":"up-regulation of protein localization in nucleolus","type":"exact"},{"name":"up-regulation of protein localization to nucleolus","type":"exact"},{"name":"upregulation of protein localisation in nucleolus","type":"exact"},{"name":"upregulation of protein localisation to nucleolus","type":"exact"},{"name":"upregulation of protein localization in nucleolus","type":"exact"},{"name":"upregulation of protein localization to nucleolus","type":"exact"}],"termid":"GO:1904751"}


id: PBO:0051671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 2","termid":"PBO:0051671"}


id: SO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial LSU rRNA is an RNA component of the large subunit of mitochondrial ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA","termid":"SO:0002128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA","synonyms":[{"name":"MT LSU rRNA","type":"exact"},{"name":"mitochondrial LSU rRNA","type":"exact"},{"name":"mitochondrial large subunit rRNA","type":"exact"}],"termid":"SO:0002345"}


id: FYPO:0005683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through prophase of mitosis is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic prophase","synonyms":[{"name":"delayed mitotic prophase progression","type":"related"},{"name":"increased duration of mitotic prophase during vegetative growth","type":"exact"},{"name":"increased duration of mitotic prophase progression","type":"exact"},{"name":"increased duration of prophase during mitotic cell cycle","type":"exact"},{"name":"prolonged mitotic prophase","type":"exact"}],"termid":"FYPO:0005683"}


id: GO:1990691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a cis-Golgi-derived vesicle to the lipid bilayer membrane around the medial-Golgi cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"cis-Golgi-derived vesicle fusion with Golgi medial cisterna membrane","synonyms":[{"name":"cis-Golgi-derived vesicle fusion with medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990691"}


id: PR:O94641
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent Clp protease ATP-binding subunit ClpA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03780","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 104 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.08c","secondary_identifiers":["UniProtKB:O94641"],"synonyms":[{"name":"Spom972h-clpA","type":"exact"},{"name":"protein aggregation-remodeling factor hsp104 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94641"}


id: PBO:0041082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"break repair meiotic recombinase recruitment factor 1","termid":"PBO:0041082"}


id: MONDO:0012817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing sarcoma/peripheral neuroectodermal tumor. It affects mostly males under age 20, and it can occur in soft tissue or bone. Pain and the presence of a mass are the most common clinical symptoms.","definition_xrefs":["NCIT:C4817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0021038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Ewing sarcoma","secondary_identifiers":["UMLS:C0553580","icd11.foundation:458106328","ICDO:9260/3","MESH:D012512","NCIT:C9341","NCIT:C7542","GARD:6390","Orphanet:319","MedDRA:10015560","MEDGEN:107816","DOID:3369","ICD10CM:C40.3","NANDO:2200053","ICD10CM:C40.2","ONCOTREE:ES","EFO:0000174","OMIM:612219","ICD10CM:C40.1"],"synonyms":[{"name":"ES","type":"exact"},{"name":"Ewing sarcoma","type":"exact"},{"name":"Ewing tumor","type":"related"},{"name":"Ewing tumour","type":"related"},{"name":"Ewing's family localised tumour","type":"exact"},{"name":"Ewing's family localized tumor","type":"exact"},{"name":"Ewing's sarcoma","type":"exact"},{"name":"Ewing's sarcoma/peripheral primitive neuroectodermal tumour","type":"related"},{"name":"Ewing's tumor","type":"exact"},{"name":"Ewing's tumour","type":"exact"},{"name":"Ewings sarcoma","type":"exact"},{"name":"Ewings sarcoma-primitive neuroectodermal tumor","type":"related"},{"name":"Ewings sarcoma-primitive neuroectodermal tumour","type":"related"},{"name":"PNET of Thoracopulmonary region","type":"exact"},{"name":"localised Ewing sarcoma","type":"related"},{"name":"localised Ewing's sarcoma","type":"related"},{"name":"localised Ewing's sarcoma/peripheral primitive neuroectodermal tumour","type":"related"},{"name":"localised Ewing's tumour","type":"related"},{"name":"localised peripheral primitive neuroectodermal tumour","type":"related"},{"name":"localized Ewing sarcoma","type":"related"},{"name":"localized Ewing's sarcoma","type":"related"},{"name":"localized Ewing's sarcoma/peripheral primitive neuroectodermal tumor","type":"related"},{"name":"localized Ewing's tumor","type":"related"},{"name":"localized peripheral primitive neuroectodermal tumor","type":"related"},{"name":"neuroepithelioma","type":"related"},{"name":"neuroepithelioma, peripheral","type":"related"},{"name":"peripheral primitive neuroectodermal tumour","type":"related"},{"name":"sarcoma, Ewing's","type":"related"}],"termid":"MONDO:0012817","xrefs":{"Monarch":{"xref_id":"0012817"}}}


id: PBO:0088222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP for Cdc42, Rga6","termid":"PBO:0088222"}


id: PBO:0054417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1813","termid":"PBO:0054417"}


id: PBO:0071903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 41","termid":"PBO:0071903"}


id: PBO:0089319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER resident protein acetylase Sdg1","termid":"PBO:0089319"}


id: PBO:0075613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted phosphoprotein 1","termid":"PBO:0075613"}


id: PBO:0064498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B","termid":"PBO:0064498"}


id: PBO:0082225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin involved in ubiquitin-dependent endocytosis; contributes to desensitization of agonist-occupied alpha-factor receptor Ste2p by Rsp5p-independent internalization; PPXY motif-mediated binding of the ubiquitin ligase Rsp5p is not required for adaptation; mutation suppresses the temperature sensitivity of an mck1 rim11 double mutant; SWAT-GFP and mCherry fusion proteins localize to the cytosol; ROG3 has a paralog, ROD1, that arose from the whole genome duplication","termid":"PBO:0082225"}


id: MONDO:0020656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the penis and is caused by human papillomavirus infection. Morphologic variants include basaloid carcinoma and warty carcinoma.","definition_xrefs":["NCIT:C27682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"},{"relation_name":"is_a","term_name":"human papillomavirus-related squamous cell carcinoma","termid":"MONDO:0020657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"human papillomavirus-related penile squamous cell carcinoma","secondary_identifiers":["UMLS:C1334056","MEDGEN:235178"],"synonyms":[{"name":"HPV-related penile squamous cell carcinoma","type":"exact"},{"name":"human papilloma virus related penile squamous cell carcinoma","type":"exact"},{"name":"human papilloma virus-related penile squamous cell carcinoma","type":"exact"},{"name":"human papillomavirus-related penile squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0020656","xrefs":{"Monarch":{"xref_id":"0020656"}}}


id: PBO:0062941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase, transmembrane","termid":"PBO:0062941"}


id: PBO:0069753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1036, pseudogene","termid":"PBO:0069753"}


id: PBO:0088869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase","termid":"PBO:0088869"}


id: MONDO:1010077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelger-Huet anomaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pelger-Huet anomaly, non-human animal","secondary_identifiers":["OMIA:000783"],"termid":"MONDO:1010077","xrefs":{"Monarch":{"xref_id":"1010077"}}}


id: MOD:01239
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-histidine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:11327326","PubMed:10717661","Unimod:53#H","PubMed:15133838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"histidine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01239"}


id: MONDO:0031061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, IIa 26","secondary_identifiers":["UMLS:C5774221","OMIM:620049","MEDGEN:1823994"],"synonyms":[{"name":"NPHS26","type":"exact"},{"name":"nephrotic syndrome, IIa 26","type":"exact"}],"termid":"MONDO:0031061","xrefs":{"Monarch":{"xref_id":"0031061"}}}


id: MONDO:1012261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stringhalt, non-human animal","termid":"MONDO:1011631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, horse","secondary_identifiers":["OMIA:000950-9796"],"termid":"MONDO:1012261","xrefs":{"Monarch":{"xref_id":"1012261"}}}


id: MONDO:0008449
data:
  {"annotated_genes":["SJAG_04459","SJAG_04425","SJAG_01466","SJAG_03712","SJAG_04156","SJAG_00106","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87706,87708,87707,87704,87709,87705,87703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011120"}]},"cv_name":"mondo","definition":"A congenital neural tube defect in which vertebrae are not fully formed. It results in the protrusion of the spinal cord through the opening of the vertebrae.","definition_xrefs":["NCIT:C101214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01466":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04156":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spina bifida","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0003105","SCTID:67531005","UMLS:C0080178","ICD9:741","DOID:0080016","icd11.foundation:2036217905","MEDGEN:38283","MESH:D016135","HP:0002414"],"synonyms":[{"name":"NTD","type":"related"},{"name":"neural tube defects, susceptibility to","type":"related"},{"name":"rachischisis","type":"exact"},{"name":"spina bifida","type":"exact"},{"name":"spina bifida (disease)","type":"exact"},{"name":"spinal meningocele","type":"exact"},{"name":"spinal myelocele","type":"exact"},{"name":"spinal myelomeningocele","type":"exact"}],"termid":"MONDO:0008449","terms_by_termid":{"MONDO:0011120":null},"xrefs":{"Monarch":{"xref_id":"0008449"}}}


id: FYPO:0004014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to UV.","definition_xrefs":["PMID:7957098","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to UV","synonyms":[{"name":"normal cell cycle regulation during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle delay following UV exposure","type":"exact"},{"name":"normal cell cycle regulation during cellular response to UV","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ultraviolet light","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to UV","type":"exact"}],"termid":"FYPO:0004014"}


id: PBO:0086504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein; in the Sigma 1278B strain background YLL053C is contiguous with AQY2 which encodes an aquaporin","termid":"PBO:0086504"}


id: MONDO:0008197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any parietal foramina in which the cause of the disease is a mutation in the MSX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parietal foramina","termid":"MONDO:0018953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"parietal foramina 1","secondary_identifiers":["MEDGEN:401480","GARD:18051","MESH:C566827","OMIM:168500","UMLS:C1868599"],"synonyms":[{"name":"MSX2 parietal foramina","type":"exact"},{"name":"PFM","type":"related"},{"name":"PFM1","type":"related"},{"name":"catlin Marks","type":"related"},{"name":"cranium bifidum occultum","type":"related"},{"name":"cranium bifidum, hereditary","type":"related"},{"name":"foramina parietalia permagna","type":"related"},{"name":"parietal foramina","type":"related"},{"name":"parietal foramina 1","type":"exact"},{"name":"parietal foramina caused by mutation in MSX2","type":"exact"},{"name":"parietal foramina, symmetric","type":"related"}],"termid":"MONDO:0008197","xrefs":{"Monarch":{"xref_id":"0008197"}}}


id: PBO:0041867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 14","termid":"PBO:0041867"}


id: GO:0043446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2, as carried out by individual cells.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane metabolic process","synonyms":[{"name":"alkane metabolism","type":"exact"}],"termid":"GO:0043446"}


id: GO:0140468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions in which a signal is passed on to downstream proteins within the cell via HRI (also known as EIF2AK1), an intracellular protein kinase that is activated by stress signals, such as heme deficiency, oxidative stress, osmotic shock, mitochondrial dysfunction and heat shock.","definition_xrefs":["PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"HRI-mediated signaling","synonyms":[{"name":"EIF2AK1-mediated signaling","type":"exact"}],"termid":"GO:0140468"}


id: PBO:0065442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 1","termid":"PBO:0065442"}


id: PBO:0117020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT86 antisense RNA 1","termid":"PBO:0117020"}


id: FYPO:0005933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during mitotic G1 phase","synonyms":[{"name":"decreased protein accumulation during mitotic G1 phase","type":"related"},{"name":"decreased protein level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005933"}


id: PBO:0088065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication","termid":"PBO:0088065"}


id: GO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which proteins and protein complexes involved in translation are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"regulation of translation by machinery localization","synonyms":[{"name":"establishment and maintenance of translational machinery localization","type":"exact"},{"name":"establishment and maintenance of translational protein localization","type":"exact"},{"name":"regulation of translation by machinery localisation","type":"exact"},{"name":"translational machinery localization","type":"exact"},{"name":"translational protein localization","type":"exact"}],"termid":"GO:0043143"}


id: GO:0046073
data:
  {"annotated_genes":["SJAG_04627","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79844,70279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dTMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dTMP metabolism","type":"exact"}],"termid":"GO:0046073","terms_by_termid":{"GO:0006231":null}}


id: MONDO:1010871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in dogs due to a mutation in the GUSB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, GUSB-related, dog","secondary_identifiers":["OMIA:000667-9615"],"synonyms":[{"name":"mucopolysaccharidosis VII, dog","type":"related"}],"termid":"MONDO:1010871","xrefs":{"Monarch":{"xref_id":"1010871"}}}


id: PBO:0045530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2 pseudogene 1","termid":"PBO:0045530"}


id: FYPO:0004472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleolus, during a cellular response to latrunculin B.","definition_xrefs":["PMID:18951025","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B","synonyms":[{"name":"abolished protein localisation to cytoplasm with protein mislocalised to nucleolus during cellular response to latrunculin B","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to LatB","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished with protein mislocalized to nucleolus during cellular response to latrunculin B","type":"exact"}],"termid":"FYPO:0004472"}


id: MONDO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inhalation anthrax (obsolete MONDO:0000269)","termid":"MONDO:0000269","xrefs":{"Monarch":{"xref_id":"0000269"}}}


id: MONDO:0017262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A inherited ichthyosis that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited non-syndromic ichthyosis (obsolete MONDO:0017262)","secondary_identifiers":["Orphanet:281082","icd11.foundation:213831678"],"synonyms":[{"name":"isolated inherited ichthyosis","type":"exact"},{"name":"nonsyndromic inherited ichthyosis","type":"exact"}],"termid":"MONDO:0017262","xrefs":{"Monarch":{"xref_id":"0017262"}}}


id: PBO:0091302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein","termid":"PBO:0091302"}


id: GO:0031934
data:
  {"annotated_genes":["SJAG_03543","SJAG_03418","SJAG_03844","SJAG_00335","SJAG_02299","SJAG_03635","SJAG_03221","SJAG_03942","SJAG_01075","SJAG_01708","SJAG_01601","SJAG_03982","SJAG_00756","SJAG_04574","SJAG_02119","SJAG_02401","SJAG_01495","SJAG_01579","SJAG_02697","SJAG_04186","SJAG_03042","SJAG_02778","SJAG_01873","SJAG_03356","SJAG_04508","SJAG_03997","SJAG_00934","SJAG_03916","SJAG_03945","SJAG_01046","SJAG_03664","SJAG_02621","SJAG_04039","SJAG_00302","SJAG_03680","SJAG_03789","SJAG_01540","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71999,72551,88206,88268,91255,91604,92122,94165,94410,96487,97055,97317,99438,99881,103536,104403,104498,107969,108467,110269,110605,110792,112407,112512,112900,112901,112902,113357,113593,114287,114721,117418,117992,118002,118050,118389,118854,119111],"is_not":false,"summary":null,"term":"GO:0031934"}]},"cv_name":"cellular_component","definition":"Heterochromatic regions of the chromosome found at silenced mating-type loci.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01046":null,"SJAG_01075":null,"SJAG_01495":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01708":null,"SJAG_01873":null,"SJAG_02119":null,"SJAG_02299":null,"SJAG_02401":null,"SJAG_02621":null,"SJAG_02697":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03221":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04508":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"mating-type region heterochromatin","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031934","terms_by_termid":{"GO:0031934":null}}


id: GO:0018101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline.","definition_xrefs":["RESID:AA0214","PMID:23175390"],"gene_count":0,"genotype_count":0,"name":"obsolete protein citrullination (obsolete GO:0018101)","synonyms":[{"name":"deimination","type":"exact"},{"name":"peptidyl-citrulline anabolism from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline biosynthetic process from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline formation from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline synthesis from peptidyl-arginine","type":"exact"}],"termid":"GO:0018101"}


id: GO:0050868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell activation","synonyms":[{"name":"down regulation of T cell activation","type":"exact"},{"name":"down-regulation of T cell activation","type":"exact"},{"name":"downregulation of T cell activation","type":"exact"},{"name":"inhibition of T cell activation","type":"narrow"},{"name":"negative regulation of T lymphocyte activation","type":"exact"},{"name":"negative regulation of T-cell activation","type":"exact"},{"name":"negative regulation of T-lymphocyte activation","type":"exact"}],"termid":"GO:0050868"}


id: PBO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutathione reductase Pgr1","termid":"PBO:0003616"}


id: PBO:0082577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin transglycosylase; functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans in the cell wall; similar to and functionally redundant with Crh1; glycosylphosphatidylinositol (GPI)-anchored protein localized to bud neck","termid":"PBO:0082577"}


id: GO:2000902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellooligosaccharide metabolic process","synonyms":[{"name":"cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000902"}


id: PBO:0048015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 3","termid":"PBO:0048015"}


id: GO:0032800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor biosynthetic process (obsolete GO:0032800)","synonyms":[{"name":"receptor anabolism","type":"exact"},{"name":"receptor biosynthesis","type":"exact"},{"name":"receptor formation","type":"exact"},{"name":"receptor synthesis","type":"exact"}],"termid":"GO:0032800"}


id: PBO:0028465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_new_mitotic_spindle_pole_body","termid":"PBO:0028465"}


id: GO:0007444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the imaginal disc over time, from its formation to the metamorphosis to form adult structures. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult structures (legs, antennae, wings, etc.).","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc development","termid":"GO:0007444"}


id: PBO:0090220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Sof1","termid":"PBO:0090220"}


id: PBO:0074625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22B","termid":"PBO:0074625"}


id: PBO:0061291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPAS2 antisense RNA 1","termid":"PBO:0061291"}


id: SO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group II intron that recognizes IBS1/EBS1 and IBS2/EBS2 for the 5-prime exon and gamma/gamma-prime for the 3-prime exon.","definition_xrefs":["PMID:20463000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"group_II_intron","termid":"SO:0000603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_IIA_intron","synonyms":[{"name":"group IIA intron","type":"exact"}],"termid":"SO:0000381"}


id: PBO:0069069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 316, pseudogene","termid":"PBO:0069069"}


id: PBO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034676"}


id: PBO:0029440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation","termid":"PBO:0029440"}


id: PBO:0049831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 2","termid":"PBO:0049831"}


id: GO:0004441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115847],"is_not":false,"summary":null,"term":"GO:0004441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.57","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-1,4-bisphosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855208","RHEA:15553","MetaCyc:3.1.3.57-RXN"],"synonyms":[{"name":"1D-myo-inositol-1,4-bisphosphate 1-phosphohydrolase activity","type":"related"},{"name":"inositol polyphosphate 1-phosphatase activity","type":"broad"},{"name":"inositol-polyphosphate 1-phosphatase activity","type":"related"}],"termid":"GO:0004441","terms_by_termid":{"GO:0004441":null}}


id: PBO:0074734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 92","termid":"PBO:0074734"}


id: GO:1900355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"negatively_regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanofuran metabolic process","synonyms":[{"name":"down regulation of methanofuran metabolic process","type":"exact"},{"name":"down regulation of methanofuran metabolism","type":"exact"},{"name":"down-regulation of methanofuran metabolic process","type":"exact"},{"name":"down-regulation of methanofuran metabolism","type":"exact"},{"name":"downregulation of methanofuran metabolic process","type":"exact"},{"name":"downregulation of methanofuran metabolism","type":"exact"},{"name":"inhibition of methanofuran metabolic process","type":"narrow"},{"name":"inhibition of methanofuran metabolism","type":"exact"},{"name":"negative regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900355"}


id: MONDO:0021379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the epicardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"neoplasm of epicardium","secondary_identifiers":["ICD9:239.89","UMLS:C1290403","SCTID:126733004","NCIT:C5347","MEDGEN:224850"],"synonyms":[{"name":"epicardial neoplasm","type":"exact"},{"name":"epicardial tumor","type":"exact"},{"name":"epicardial tumour","type":"exact"},{"name":"epicardium neoplasm","type":"exact"},{"name":"epicardium neoplasm (disease)","type":"exact"},{"name":"epicardium tumor","type":"exact"},{"name":"epicardium tumour","type":"exact"},{"name":"neoplasm of epicardium","type":"exact"},{"name":"neoplasm of the epicardium","type":"exact"},{"name":"tumor of epicardium","type":"exact"},{"name":"tumor of the epicardium","type":"exact"},{"name":"tumour of epicardium","type":"exact"},{"name":"tumour of the epicardium","type":"exact"}],"termid":"MONDO:0021379","xrefs":{"Monarch":{"xref_id":"0021379"}}}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: GO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of an substrate by the conjugation of glucuronic acid to form an acyl-glucuronide (also called an acyl-glucuronoside).","definition_xrefs":["PMID:22294686","GOC:vk","GOC:BHF","PMID:12485951"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl glucuronidation (obsolete GO:0036236)","termid":"GO:0036236"}


id: GO:0102574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxo-myristoyl-[acp] = 3-oxo-myristate + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-myristoyl-ACP hydrolase activity (obsolete GO:0102574)","termid":"GO:0102574"}


id: PBO:0084917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone; required for the assembly of alpha and beta subunits into the F1 sector of mitochondrial F1F0 ATP synthase; N-terminally propionylated in vivo","termid":"PBO:0084917"}


id: PBO:0053364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 273","termid":"PBO:0053364"}


id: MONDO:0004962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endometrial carcinoma is a carcinoma that arises from the endometrium (the lining of the uterus or womb). It is the result of the abnormal growth of cells that have the ability to invade or spread to other parts of the body. The first sign is most often vaginal bleeding not associated with a menstrual period. Other symptoms include pain with urination or sexual intercourse, or pelvic pain. Endometrial cancer occurs most commonly after menopause. In stage II the cancer has spread from the body of the uterus and is growing into the supporting connective tissue of the cervix (called the cervical stroma). The cancer has spread into connective tissue of the cervix, but has not spread outside the uterus.","definition_xrefs":["EFO:0000206"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete stage of disease (obsolete MONDO:0021007)","termid":"MONDO:0021007"},{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"stage II endometrioid carcinoma","termid":"MONDO:0004962","xrefs":{"Monarch":{"xref_id":"0004962"}}}


id: PBO:0078633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIO and F-actin binding protein","termid":"PBO:0078633"}


id: GO:0048850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hypophysis are generated and organized. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:jid","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"pituitary gland development","termid":"GO:0021983"},{"relation_name":"part_of","term_name":"diencephalon morphogenesis","termid":"GO:0048852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypophysis morphogenesis","synonyms":[{"name":"pituitary gland morphogenesis","type":"exact"}],"termid":"GO:0048850"}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: GO:0106329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-phenylalanine + O2 = 3-phenylpyruvate + H2O2 + NH4(+).","definition_xrefs":["RHEA:61240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-phenylalaine oxidase activity","termid":"GO:0106329"}


id: PBO:0018010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the ribosomal bL21 domain does not exist on its own","termid":"PBO:0018010"}


id: MONDO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the cerebral artery.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral arteritis","secondary_identifiers":["DOID:11390","SCTID:28366008","MEDGEN:507535","ICD9:437.4","UMLS:C0007773"],"synonyms":[{"name":"cerebral artery inflammation","type":"exact"},{"name":"inflammation of cerebral artery","type":"exact"}],"termid":"MONDO:0001277","xrefs":{"Monarch":{"xref_id":"0001277"}}}


id: FYPO:0005132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to an enzymes that degrades cell wall polysaccharides.","definition_xrefs":["PMID:24623719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to cell wall-degrading enzymes","synonyms":[{"name":"spores sensitive to glusulase","type":"narrow"}],"termid":"FYPO:0005132"}


id: GO:0019962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type I interferon. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["PMID:15546383","GOC:add","PMID:16681834","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon binding","termid":"GO:0019961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type I interferon binding","synonyms":[{"name":"interferon-alpha binding","type":"narrow"},{"name":"interferon-alpha/beta binding","type":"narrow"},{"name":"interferon-beta binding","type":"narrow"},{"name":"interferon-delta binding","type":"narrow"},{"name":"interferon-epsilon binding","type":"narrow"},{"name":"interferon-kappa binding","type":"narrow"},{"name":"interferon-omega binding","type":"narrow"},{"name":"interferon-tau binding","type":"narrow"},{"name":"interferon-zeta binding","type":"narrow"},{"name":"type I IFN binding","type":"exact"}],"termid":"GO:0019962"}


id: MONDO:0020431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juxtaposition of the atrial appendages is a rare atrial appendage anomaly when both appendages are located on the left or the right side of the great arteries. It is asymptomatic and is usually diagnosed incidentally, but is frequently associated with other congenital heart diseases.","definition_xrefs":["Orphanet:99100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juxtaposition of the atrial appendages","secondary_identifiers":["GARD:19648","UMLS:C1290478","MEDGEN:712843"],"synonyms":[{"name":"juxtaposition of the atrial auricles","type":"exact"}],"termid":"MONDO:0020431","xrefs":{"Monarch":{"xref_id":"0020431"}}}


id: GO:0048142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The four rounds of incomplete mitosis undergone by a cystoblast to form a 16-cell cyst of interconnected cells within a germarium. Within the cyst, one cell differentiates into an oocyte while the rest become nurse cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11131529","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystoblast division","termid":"GO:0007282"},{"relation_name":"part_of","term_name":"germarium-derived female germ-line cyst formation","termid":"GO:0030727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived cystoblast division","synonyms":[{"name":"germarium-derived cystoblast cell division","type":"exact"}],"termid":"GO:0048142"}


id: PBO:0049363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 22","termid":"PBO:0049363"}


id: GO:0071656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of granulocyte colony stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte colony-stimulating factor production","termid":"GO:0071655"},{"relation_name":"is_a","term_name":"negative regulation of macrophage colony-stimulating factor production","termid":"GO:1901257"},{"relation_name":"negatively_regulates","term_name":"granulocyte colony-stimulating factor production","termid":"GO:0071611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulocyte colony-stimulating factor production","synonyms":[{"name":"negative regulation of CSF3 production","type":"exact"},{"name":"negative regulation of G-CSF production","type":"exact"},{"name":"negative regulation of colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"negative regulation of filgrastim production","type":"exact"},{"name":"negative regulation of granulocyte colony stimulating factor production","type":"exact"},{"name":"negative regulation of lenograstim production","type":"exact"},{"name":"negative regulation of pluripoietin production","type":"exact"}],"termid":"GO:0071656"}


id: PR:O60059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf1 gene.","definition_xrefs":["UniProtKB:O60059","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C56F2.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.08c","synonyms":[{"name":"Spom972h-puf1","type":"exact"}],"termid":"PR:O60059"}


id: PATO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the tongue.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved lingually","termid":"PATO:0005019"}


id: GO:1900620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an acetate esteran acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid.","definition_xrefs":["GOC:TermGenie","PMID:15042596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetate ester biosynthetic process","synonyms":[{"name":"acetate ester anabolism","type":"exact"},{"name":"acetate ester biosynthesis","type":"exact"},{"name":"acetate ester formation","type":"exact"},{"name":"acetate ester synthesis","type":"exact"},{"name":"acetyl ester biosynthesis","type":"exact"},{"name":"acetyl ester biosynthetic process","type":"exact"}],"termid":"GO:1900620"}


id: PBO:0074211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC41A3 antisense RNA 1","termid":"PBO:0074211"}


id: PBO:0063994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 28","termid":"PBO:0063994"}


id: PBO:0066935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 237","termid":"PBO:0066935"}


id: GO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonyl-[acyl-carrier protein] = acetoacyl-[acyl-carrier protein] + CoA + CO2.","definition_xrefs":["EC:2.3.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-ketoacyl-acyl-carrier-protein synthase III activity","secondary_identifiers":["MetaCyc:2.3.1.180-RXN","RHEA:12080"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase III activity","type":"related"},{"name":"3-oxoacyl:ACP synthase III activity","type":"related"},{"name":"FabH","type":"related"},{"name":"KAS III","type":"related"},{"name":"KASIII","type":"related"},{"name":"acetyl-CoA:malonyl-acyl-carrier-protein C-acyltransferase activity","type":"related"},{"name":"beta-ketoacyl (acyl carrier protein) synthase III activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase III activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase III activity","type":"related"}],"termid":"GO:0033818"}


id: GO:0001193
data:
  {"annotated_genes":["SJAG_00119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79328],"is_not":false,"summary":null,"term":"GO:0001193"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation from an RNA polymerase II promoter.","definition_xrefs":["PMID:14531857","PMID:17535246","PMID:16492753","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of transcriptional fidelity during transcription elongation","termid":"GO:0001192"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001193","terms_by_termid":{"GO:0001193":null}}


id: MONDO:0001613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized or diffuse reduction in blood flow through the vertebrobasilar arterial system, which supplies the brain stem; cerebellum; occipital lobe; medial temporal lobe; and thalamus. Characteristic clinical features include syncope; lightheadedness; visual disturbances; and vertigo. brain stem infarctions or other brain infarction may be associated.","definition_xrefs":["MESH:D014715"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"transient ischemic attack","termid":"MONDO:0005264"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrobasilar insufficiency","secondary_identifiers":["SCTID:195199008","MEDGEN:12075","SCTID:64009001","UMLS:C0042568","ICD9:435.3","DOID:13003","EFO:1001449"],"synonyms":[{"name":"vertebro-basilar insufficiency","type":"exact"},{"name":"vertebrobasilar arterial insufficiency","type":"exact"},{"name":"vertebrobasilar artery syndrome","type":"exact"},{"name":"vertebrobasilar insufficiency","type":"exact"}],"termid":"MONDO:0001613","xrefs":{"Monarch":{"xref_id":"0001613"}}}


id: GO:0140652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyripyropene A.","definition_xrefs":["PMID:26019565","GOC:ach","PMID:21224862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pyripyropene A biosynthetic process","synonyms":[{"name":"pyripyropene A anabolism","type":"exact"},{"name":"pyripyropene A biosynthesis","type":"exact"},{"name":"pyripyropene A formation","type":"exact"},{"name":"pyripyropene A synthesis","type":"exact"}],"termid":"GO:0140652"}


id: GO:0051066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a dihydrobiopterin, a reduced pteridine derivative related to folic acid; it acts as an electron carrier in tyrosine biosynthesis and its quinoid form is produced by oxidation of tetrahydrobiopterin in several biological hydroxylation reactions.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydrobiopterin metabolic process","synonyms":[{"name":"6,7-dihydrobiopterin metabolic process","type":"narrow"},{"name":"7,8-dihydrobiopterin metabolic process","type":"narrow"},{"name":"dihydrobiopterin reduction","type":"narrow"},{"name":"dihydropterin metabolic process","type":"exact"},{"name":"dihydropterin metabolism","type":"exact"}],"termid":"GO:0051066"}


id: PBO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 4","termid":"PBO:0060707"}


id: MONDO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the LRSAM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2P","secondary_identifiers":["DOID:0110169","Orphanet:300319","GARD:12435","OMIM:608591","OMIM:614436","Orphanet:99941","UMLS:C3280797","SCTID:719511005","MEDGEN:482427"],"synonyms":[{"name":"CMT 2G","type":"related"},{"name":"CMT2G","type":"related"},{"name":"CMT2P","type":"exact"},{"name":"Charcot Marie Tooth disease type 2G","type":"related"},{"name":"Charcot-Marie-Tooth disease caused by mutation in LRSAM1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2G","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2P","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2G","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2G, formerly","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2P","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, with vocal cord paresis, autosomal recessive","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4A, axonal form","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 2P","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2G","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy, type 2P","type":"exact"},{"name":"Charcot-Marie-Toothe disease, axonal, type 2P","type":"exact"},{"name":"LRSAM1 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2G","type":"exact"}],"termid":"MONDO:0013753","xrefs":{"Monarch":{"xref_id":"0013753"}}}


id: GO:0014893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rest stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rest involved in regulation of muscle adaptation","termid":"GO:0014893"}


id: PBO:0077984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 6-1","termid":"PBO:0077984"}


id: MONDO:0011488
data:
  {"annotated_genes":["SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86059],"is_not":false,"summary":null,"term":"MONDO:0011488"}]},"cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CDK5RAP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 3, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070286","UMLS:C1858108","MESH:C565746","GARD:15373","OMIM:604804","MEDGEN:347619"],"synonyms":[{"name":"CDK5RAP2 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH3","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CDK5RAP2","type":"exact"},{"name":"microcephaly 3, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0011488","terms_by_termid":{"MONDO:0011488":null},"xrefs":{"Monarch":{"xref_id":"0011488"}}}


id: PBO:0114420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIF family member 3","termid":"PBO:0114420"}


id: GO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-matrix adhesion","termid":"GO:0001952"}


id: PBO:0040068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP21 antisense RNA 1","termid":"PBO:0040068"}


id: MONDO:0032691
data:
  {"annotated_genes":["SJAG_04848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86432],"is_not":false,"summary":null,"term":"MONDO:0032691"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618347","UMLS:C5193043","MEDGEN:1674560","GARD:16343"],"synonyms":[{"name":"GALLOWAY-MOWAT SYNDROME 6","type":"related"},{"name":"GAMOS6","type":"related"}],"termid":"MONDO:0032691","terms_by_termid":{"MONDO:0032691":null},"xrefs":{"Monarch":{"xref_id":"0032691"}}}


id: PBO:0060187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC5B antisense RNA 1","termid":"PBO:0060187"}


id: PBO:0031442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_vegetative_growth","termid":"PBO:0031442"}


id: SO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 12-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_12_signal","synonyms":[{"name":"minus 12 signal","type":"exact"}],"termid":"SO:0001673"}


id: PBO:0072265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 3","termid":"PBO:0072265"}


id: FYPO:0004870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is shorter than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of mitotic G2 DNA damage checkpoint","synonyms":[{"name":"decreased duration of G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint activation","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"reduced duration of mitotic G2 DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004870"}


id: FYPO:0005579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased in centromeric regions during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic sister chromatid cohesion","termid":"FYPO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion at centromere","synonyms":[{"name":"decreased meiotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"decreased sister chromatid cohesion at centromere during meiosis","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion at centromere","type":"exact"}],"termid":"FYPO:0005579"}


id: MONDO:1011897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cavitating leukodystrophy, non-human animal","secondary_identifiers":["OMIA:002214"],"termid":"MONDO:1011897","xrefs":{"Monarch":{"xref_id":"1011897"}}}


id: PBO:0073724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 6","termid":"PBO:0073724"}


id: PBO:0005670
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.12","termid":"PBO:0005670"}


id: GO:1905794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:25736288","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to puromycin","synonyms":[{"name":"response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905794"}


id: FYPO:0000831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of actinomycin D than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to actinomycin D","synonyms":[{"name":"resistance to actinomycin D during mitotic cell cycle","type":"related"},{"name":"resistance to actinomycin D during vegetative growth","type":"exact"},{"name":"resistant to actinomycin D","type":"exact"}],"termid":"FYPO:0000831"}


id: PBO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 21","termid":"PBO:0046640"}


id: FYECO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 1-Na-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 1-Na-PP1","synonyms":[{"name":"1-Na-PP1 present","type":"exact"},{"name":"4-amino-1-tert-butyl-3-(1'-naphthyl)pyrazolo[3,4-d]pyrimidine added","type":"exact"},{"name":"4-amino-1-tert-butyl-3-(1'-naphthyl)pyrazolo[3,4-d]pyrimidine present","type":"exact"}],"termid":"FYECO:0000071"}


id: MONDO:0019036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Free-living amebae belonging to the genera Acanthamoeba, Balamuthia, Naegleria and Sappinia are important causes of disease in humans and animals. Naegleria fowleri produces an acute, and usually lethal, central nervous system (CNS) disease called primary amebic meningoencephalitis (PAM). Acanthamoeba spp. and Balamuthia mandrillaris are opportunistic free-living amebae capable of causing granulomatous amebic encephalitis (GAE) in individuals with compromised immune systems. Sappinia pedata has been implicated in a case of amebic encephalitis. Naegleria fowleri and Acanthamoeba spp., are commonly found in lakes, swimming pools, tap water, and heating and air conditioning units.","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amoebiasis due to free-living amoebae","secondary_identifiers":["MEDGEN:509253","GARD:12650","Orphanet:68","UMLS:C0153326"],"termid":"MONDO:0019036","xrefs":{"Monarch":{"xref_id":"0019036"}}}


id: GO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-histidine amide by hydrolysis and oxidation of an interior His-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0089"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-histidine amidation (obsolete GO:0018042)","termid":"GO:0018042"}


id: PBO:0083227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR045C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083227"}


id: GO:0046419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving octopine, (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete octopine metabolic process (obsolete GO:0046419)","synonyms":[{"name":"octopine metabolism","type":"exact"}],"termid":"GO:0046419"}


id: PBO:0080510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 intronic transcript 1","termid":"PBO:0080510"}


id: PBO:0088900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, involved in mitochondrial gene expression","termid":"PBO:0088900"}


id: MONDO:0012273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the CIB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 48","secondary_identifiers":["DOID:0110505","MEDGEN:332149","MESH:C563720","GARD:22612","OMIM:609439","UMLS:C1836199"],"synonyms":[{"name":"CIB2 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB48","type":"narrow"},{"name":"autosomal recessive deafness 48","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 48","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CIB2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 48","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 48","type":"exact"},{"name":"deafness, autosomal recessive 48","type":"narrow"},{"name":"deafness, autosomal recessive type 48","type":"narrow"}],"termid":"MONDO:0012273","xrefs":{"Monarch":{"xref_id":"0012273"}}}


id: PR:Q1RKN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tlh2 gene.","definition_xrefs":["UniProtKB:Q1RKN3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase tlh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.08c","synonyms":[{"name":"Spom972h-tlh2","type":"exact"},{"name":"Sub-telomeric helicase RecQ homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1RKN3"}


id: PBO:0050087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 7","termid":"PBO:0050087"}


id: GO:1904381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein alpha-1,2-demannosylation that takes place in the Golgi apparatus.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000062","PMID:10915796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"},{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi apparatus mannose trimming","secondary_identifiers":["Reactome:R-HSA-964827"],"synonyms":[{"name":"glycoprotein mannose trimming in Golgi apparatus","type":"related"},{"name":"glycoprotein mannose trimming in Golgi complex","type":"related"},{"name":"glycoprotein mannose trimming in Golgi ribbon","type":"related"},{"name":"mannose trimming in Golgi","type":"broad"},{"name":"mannose trimming in Golgi apparatus","type":"exact"},{"name":"mannose trimming in cis-Golgi","type":"narrow"},{"name":"protein alpha-1,2-demannosylation in Golgi apparatus","type":"exact"},{"name":"protein alpha-1,2-demannosylation in Golgi complex","type":"exact"},{"name":"protein alpha-1,2-demannosylation in Golgi ribbon","type":"narrow"}],"termid":"GO:1904381"}


id: PBO:0072026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 2","termid":"PBO:0072026"}


id: MONDO:0020800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition in which there is degeneration of the myelin sheath that covers the nerves of the central nervous system.","definition_xrefs":["NCIT:C34526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"demyelinating disease of central nervous system","secondary_identifiers":["ICD9:341.8","ICD9:341.9","SCTID:6118003","UMLS:C0011302","ICD10CM:G35-G37","MEDGEN:3719"],"synonyms":[{"name":"demyelinating CNS disease","type":"exact"},{"name":"demyelinating disease central nervous system (CNS)","type":"exact"},{"name":"demyelinating disease of central nervous system","type":"exact"},{"name":"demyelinating disorder of central nervous system","type":"exact"},{"name":"demyelinating disorders of the central nervous system","type":"exact"}],"termid":"MONDO:0020800","xrefs":{"Monarch":{"xref_id":"0020800"}}}


id: MONDO:0017205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary oculocerebral lymphoma is a rare, primary, organ-specific, extranodal non-Hodgkin's lymphoma (typically diffuse large B-cell lymphoma), simultaneously affecting the intraocular compartments (retina, vitreous, optic nerve, uvea and others) and the central nervous system (commonly the cerebellum, spinal cord or pia mater). The presenting symptoms vary depending on the localization of the tumor and may include vitreous floaters or blurred vision, raised intracranial pressure (headache, vomiting, papilledema) and/or focal neurological deficits.","definition_xrefs":["Orphanet:279897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye lymphoma","termid":"MONDO:0004034"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"primary oculocerebral lymphoma","secondary_identifiers":["icd11.foundation:446504143","MEDGEN:1814439","UMLS:C5679779","GARD:21062"],"synonyms":[{"name":"primary oculocerebral non-Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0017205","xrefs":{"Monarch":{"xref_id":"0017205"}}}


id: PBO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(10)","termid":"PBO:0032733"}


id: FYPO:0003442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more actin cables does not occur. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cable","termid":"FYPO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to actin cable","synonyms":[{"name":"abolished protein localisation to actin cable","type":"exact"},{"name":"abolished protein localization to actin cable during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actin cable during vegetative growth","type":"exact"},{"name":"abolished protein localization to formin-nucleated actin cable","type":"exact"},{"name":"protein absent from actin cable","type":"related"},{"name":"protein localization to actin cable abolished","type":"exact"}],"termid":"FYPO:0003442"}


id: MONDO:0013526
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86386],"is_not":false,"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the GOSR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonic epilepsy type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614018","Orphanet:280620","UMLS:C5190805","DOID:0111449","icd11.foundation:878291417","GARD:3872","MEDGEN:1681379"],"synonyms":[{"name":"EPM6","type":"exact"},{"name":"GOSR2 progressive myoclonic epilepsy","type":"exact"},{"name":"GOSR2-related progressive myoclonus ataxia","type":"exact"},{"name":"North Sea progressive myoclonus epilepsy","type":"exact"},{"name":"PME type 6","type":"exact"},{"name":"epilepsy, progressive myoclonic 6","type":"exact"},{"name":"epilepsy, progressive myoclonic, 6","type":"related"},{"name":"epilepsy, progressive myoclonic, type 6","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in GOSR2","type":"exact"},{"name":"progressive myoclonus epilepsy type 6","type":"exact"}],"termid":"MONDO:0013526","terms_by_termid":{"MONDO:0013526":null},"xrefs":{"Monarch":{"xref_id":"0013526"}}}


id: MONDO:0009126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duodenal atresia is an embryopathy of the cranial intestine that leads to a complete absence of the duodenal lumen.","definition_xrefs":["Orphanet:1203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal atresia","termid":"MONDO:0001045"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal atresia","secondary_identifiers":["MESH:C535720","MEDGEN:75602","UMLS:C0266174","HP:0002247","GARD:54","ICD9:751.1","NCIT:C101025","NORD:1066","OMIM:223400","SCTID:51118003","DOID:0080216","MedDRA:10013812"],"synonyms":[{"name":"Duodenal Atresia or Stenosis","type":"exact"},{"name":"atresia of duodenum","type":"exact"},{"name":"congenital atresia of duodenum","type":"exact"},{"name":"congenital duodenal atresia","type":"exact"},{"name":"duodenal atresia","type":"exact"},{"name":"duodenal atresia (disease)","type":"exact"},{"name":"duodenal stenosis","type":"related"}],"termid":"MONDO:0009126","xrefs":{"Monarch":{"xref_id":"0009126"}}}


id: GO:0031788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a motilin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"motilin receptor binding","synonyms":[{"name":"motilin receptor ligand","type":"narrow"}],"termid":"GO:0031788"}


id: PBO:0047191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 209 member A","termid":"PBO:0047191"}


id: PBO:0087172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit","termid":"PBO:0087172"}


id: GO:0034306
data:
  {"annotated_genes":["SJAG_04140","SJAG_00993","SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[102608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[91066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[92527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore formation from the products of meiosis. An example of this is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"sexual sporulation","termid":"GO:0034293"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of sexual sporulation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPKKK cascade during sporulation","type":"related"},{"name":"regulation of meiotic spore formation","type":"exact"},{"name":"regulation of meiotic sporulation","type":"exact"},{"name":"regulation of sexual spore formation","type":"exact"}],"termid":"GO:0034306","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: MONDO:0017777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rat-bite fever (obsolete MONDO:0017777)","termid":"MONDO:0017777","xrefs":{"Monarch":{"xref_id":"0017777"}}}


id: MONDO:0013590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Stickler syndrome in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome","termid":"MONDO:0019354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005497","MONDO:0005559"],"is_obsolete":false,"name":"Stickler syndrome, type 4","secondary_identifiers":["UMLS:C3279941","GARD:18358","MEDGEN:481571","OMIM:614134"],"synonyms":[{"name":"COL9A1 autosomal recessive Stickler syndrome","type":"exact"},{"name":"STICKLER syndrome, type IV","type":"related"},{"name":"STL4","type":"related"},{"name":"autosomal recessive Stickler syndrome caused by mutation in COL9A1","type":"exact"}],"termid":"MONDO:0013590","xrefs":{"Monarch":{"xref_id":"0013590"}}}


id: MOD:00407
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxyl group with a carboxy methyl ester group. OBSOLETE because Unimod:14 merged with entry 34, remap to MOD:00599.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00407 residue methyl ester (obsolete MOD:00407)","synonyms":[{"name":"ResOMe","type":"exact"}],"termid":"MOD:00407"}


id: PBO:0040959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 30","termid":"PBO:0040959"}


id: MONDO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 5A, intermediate","secondary_identifiers":["UMLS:C5676956","MEDGEN:1811851","OMIM:619816"],"synonyms":[{"name":"JEB5A","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, generalised intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, generalized intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, non-herlitz IIA","type":"exact"}],"termid":"MONDO:0030768","xrefs":{"Monarch":{"xref_id":"0030768"}}}


id: GO:0015371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"galactose:sodium symporter activity","termid":"GO:0015371"}


id: PR:O42980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.01","synonyms":[{"name":"Spom972h-nep1","type":"exact"}],"termid":"PR:O42980"}


id: GO:0018971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic toluene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tol2"],"synonyms":[{"name":"anaerobic toluene metabolism","type":"exact"}],"termid":"GO:0018971"}


id: MONDO:0014535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperproinsulinemia","secondary_identifiers":["MESH:C562776","MEDGEN:137967","OMIM:616214","SCTID:237613005","UMLS:C0342283","ICD9:250.80","EFO:0009650"],"synonyms":[{"name":"hyperproinsulinemia","type":"exact"}],"termid":"MONDO:0014535","xrefs":{"Monarch":{"xref_id":"0014535"}}}


id: GO:0019883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) of endogenous origin on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","PMID:15928678","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous antigen","synonyms":[{"name":"antigen presentation, endogenous antigen","type":"exact"}],"termid":"GO:0019883"}


id: PBO:0039160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 5","termid":"PBO:0039160"}


id: PBO:0073735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 3","termid":"PBO:0073735"}


id: PBO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase Cts1 (predicted)","termid":"PBO:0000841"}


id: MONDO:1011171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, dog","secondary_identifiers":["OMIA:000750-9615"],"termid":"MONDO:1011171","xrefs":{"Monarch":{"xref_id":"1011171"}}}


id: PBO:0069662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 939, pseudogene","termid":"PBO:0069662"}


id: GO:0031016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas development","secondary_identifiers":["Wikipedia:Pancreas"],"termid":"GO:0031016"}


id: GO:0006586
data:
  {"annotated_genes":["SJAG_03167","SJAG_05007","SJAG_01455","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74592,77557,79588,73646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indolalkylamine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"indolalkylamine metabolism","type":"exact"},{"name":"indolamine metabolic process","type":"broad"},{"name":"indolamine metabolism","type":"broad"}],"termid":"GO:0006586","terms_by_termid":{"GO:0000162":null}}


id: PBO:0039254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member B2","termid":"PBO:0039254"}


id: MONDO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peritoneal serous papillary adenocarcinoma (obsolete MONDO:0003817)","termid":"MONDO:0003817","xrefs":{"Monarch":{"xref_id":"0003817"}}}


id: PBO:0038318
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abstract","termid":"PBO:0038318"}


id: FYPO:0004869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Crb2 accumulates is lower than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:15226425","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Crb2 foci during cellular response to ionizing radiation","synonyms":[{"name":"decreased number of Crb2 foci during cellular response to IR","type":"exact"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced number of Crb2 foci during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004869"}


id: PBO:0110069
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as ortholog of human WDR54","termid":"PBO:0110069"}


id: PBO:0091022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type transcription factor (Mc-like)","termid":"PBO:0091022"}


id: GO:0140447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of a peptide bond in a precursor form of a cytokine, resulting in the mature (active) form of the cytokine.","definition_xrefs":["PMID:29247995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"},{"relation_name":"part_of","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"cytokine precursor processing","synonyms":[{"name":"interleukin maturation","type":"narrow"},{"name":"interleukin processing","type":"narrow"}],"termid":"GO:0140447"}


id: GO:0061329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule principal cell. A Malpighian tubule principal cell is an epithelial secretory cell that transports cations into the lumen of the tubule.","definition_xrefs":["PMID:19783135","GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule principal cell differentiation","termid":"GO:0061329"}


id: PBO:0117013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ8 antisense RNA 1","termid":"PBO:0117013"}


id: PR:O13773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.12","synonyms":[{"name":"Spom972h-ucp7","type":"exact"}],"termid":"PR:O13773"}


id: PBO:0015231
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens PSMD14","termid":"PBO:0015231"}


id: MONDO:0800485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any overgrowth syndrome where the cause of the disease is a gain-of-function variant in the AKT3 gene.","definition_xrefs":["PMID:28969385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3-related overgrowth spectrum","termid":"MONDO:0800485","xrefs":{"Monarch":{"xref_id":"0800485"}}}


id: MONDO:0017874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Argentine hemorrhagic fever (AHF), caused by the Junin virus (JUNV), is an acute viral hemorrhagic disease characterized by initial fever and malaise followed by gastrointestinal symptoms and in some cases hemorrhagic and neurological manifestations.","definition_xrefs":["Orphanet:319223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arenavirus hemorrhagic fever","termid":"MONDO:0005651"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Argentine hemorrhagic fever","secondary_identifiers":["UMLS:C0019097","DOID:0050194","GARD:21411","icd11.foundation:257166193","MEDGEN:9211","SCTID:58868000"],"synonyms":[{"name":"Argentinian hemorrhagic fever","type":"exact"},{"name":"Junin hemorrhagic fever","type":"exact"}],"termid":"MONDO:0017874","xrefs":{"Monarch":{"xref_id":"0017874"}}}


id: PBO:0089475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, unknown specificity, implicated in sulfur compound metabolism","termid":"PBO:0089475"}


id: PBO:0030025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_adhesion","termid":"PBO:0030025"}


id: PBO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 15","termid":"PBO:0047361"}


id: GO:0140712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"negatively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"negative regulation of FNI","type":"broad"},{"name":"negative regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140712"}


id: MONDO:0013924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the BMP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 13","secondary_identifiers":["MEDGEN:766801","UMLS:C3553887","GARD:15856","DOID:0110342","OMIM:614856"],"synonyms":[{"name":"BMP1 osteogenesis imperfecta","type":"exact"},{"name":"OI, type 13","type":"related"},{"name":"OI13","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in BMP1","type":"exact"},{"name":"osteogenesis imperfecta type XIII","type":"exact"},{"name":"osteogenesis imperfecta, type 13","type":"related"},{"name":"osteogenesis imperfecta, type XIII","type":"related"}],"termid":"MONDO:0013924","xrefs":{"Monarch":{"xref_id":"0013924"}}}


id: FYPO:0007148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to transplatin. Cells stop growing (and may die) at a concentration of transplatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to transplatin","synonyms":[{"name":"hypersensitive to transplatin","type":"exact"},{"name":"sensitive to transplatin during mitotic cell cycle","type":"related"},{"name":"sensitive to v during vegetative growth","type":"exact"}],"termid":"FYPO:0007148"}


id: FYPO:0001435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing erythromycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on erythromycin","synonyms":[{"name":"normal cell population growth in presence of erythromycin","type":"exact"},{"name":"normal cell population growth on erythromycin","type":"exact"},{"name":"normal cellular response to erythromycin","type":"related"},{"name":"normal vegetative cell population growth on erythromycin","type":"exact"}],"termid":"FYPO:0001435"}


id: GO:0050137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O2 + H+ + NADPH = 2 H2O + NADP+.","definition_xrefs":["RHEA:15173","EC:1.11.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"NADPH peroxidase activity","secondary_identifiers":["KEGG_REACTION:R00113","MetaCyc:NADPH-PEROXIDASE-RXN"],"synonyms":[{"name":"NADP peroxidase activity","type":"related"},{"name":"NADPH:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"TPN peroxidase activity","type":"related"},{"name":"TPNH peroxidase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate peroxidase activity","type":"related"},{"name":"triphosphopyridine nucleotide peroxidase activity","type":"related"}],"termid":"GO:0050137"}


id: GO:0061116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis process in which the ductus venosus changes to no longer permit blood flow after birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ductus venosus closure","termid":"GO:0061116"}


id: MONDO:0016455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus-associated trichodysplasia spinulosa is a rare infectious skin disease characterized by the development of follicular papules with keratin spicules in various parts of the body, predominantly in the face (e.g. nose, eyebrows, auricles), that is due to polyomavirus infection in immunocompromized patients.","definition_xrefs":["Orphanet:228379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"virus-associated trichodysplasia spinulosa","secondary_identifiers":["GARD:20592","MEDGEN:1432798","UMLS:C3267126"],"synonyms":[{"name":"Cyclosporine-induced folliculodystrophy","type":"exact"},{"name":"TS","type":"exact"},{"name":"VATS","type":"exact"},{"name":"pilomatrix dysplasia","type":"exact"},{"name":"trichodysplasia spinulosa","type":"exact"}],"termid":"MONDO:0016455","xrefs":{"Monarch":{"xref_id":"0016455"}}}


id: PBO:0052454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 5","termid":"PBO:0052454"}


id: PBO:0066854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 154","termid":"PBO:0066854"}


id: FYPO:0007196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, occurs to a lower extent than normal.","definition_xrefs":["PMID:30602572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitochondrial fission","synonyms":[{"name":"decreased frequency of mitochondrial fission","type":"exact"},{"name":"decreased mitochondrial division","type":"exact"},{"name":"decreased mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial fission during vegetative growth","type":"exact"},{"name":"decreased mitochondrial proliferation","type":"related"},{"name":"reduced mitochondrial fission","type":"exact"}],"termid":"FYPO:0007196"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: PBO:0014267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, possible transaminase, unknown specificity","termid":"PBO:0014267"}


id: GO:0098890
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of synaptic membrane","termid":"GO:0099243"},{"relation_name":"part_of","term_name":"postsynaptic membrane","termid":"GO:0045211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"}


id: MONDO:0021354
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the adipose tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"tumor of adipose tissue","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:61646","UMLS:C0206631","ICD9:239.2","SCTID:254831005","NCIT:C4248"],"synonyms":[{"name":"adipose tissue neoplasm","type":"exact"},{"name":"adipose tissue neoplasm (disease)","type":"exact"},{"name":"adipose tissue tumor","type":"exact"},{"name":"adipose tissue tumour","type":"exact"},{"name":"lipomatous neoplasm","type":"exact"},{"name":"lipomatous tumor","type":"exact"},{"name":"lipomatous tumour","type":"exact"},{"name":"neoplasm of adipose tissue","type":"exact"},{"name":"neoplasm of the adipose tissue","type":"exact"},{"name":"tumor of adipose tissue","type":"exact"},{"name":"tumor of the adipose tissue","type":"exact"},{"name":"tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0021354","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0021354"}}}


id: MONDO:0030805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia 49","secondary_identifiers":["OMIM:619806","MEDGEN:1805601","Orphanet:631106","UMLS:C5676950"],"synonyms":[{"name":"SCA49","type":"exact"},{"name":"spinocerebellar ataxia 49","type":"exact"}],"termid":"MONDO:0030805","xrefs":{"Monarch":{"xref_id":"0030805"}}}


id: MONDO:0005181
data:
  {"annotated_genes":["SJAG_04816","SJAG_04665","SJAG_00885","SJAG_06022","SJAG_02658","SJAG_04183","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[85519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[86701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[85481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[86772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[86414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","definition":"A mitochondrial myopathy characterized by slowly progressive paralysis of the levator palpebrae, orbicularis oculi, and extraocular muscles. Ragged-red fibers and atrophy are found on muscle biopsy. Familial and sporadic forms may occur. Disease onset is usually in the first or second decade of life, and the illness slowly progresses until usually all ocular motility is lost. (From Adams et al., Principles of Neurology, 6th ed, p1422)","definition_xrefs":["MESH:D017246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"ophthalmoplegia","termid":"MONDO:0003425"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H49.4","GARD:4503","DOID:12558","ICD9:378.72","Orphanet:520820","UMLS:C0162674","EFO:0002509","MEDGEN:102439","SCTID:46252003","HP:0000590","icd11.foundation:1698427219","NANDO:1200174"],"synonyms":[{"name":"chronic progressive external ophthalmoplegia","type":"related"},{"name":"chronic progressive external ophthalmoplegia [ambiguous]","type":"exact"},{"name":"progressive external ophthalmoplegia","type":"exact"}],"termid":"MONDO:0005181","terms_by_termid":{"MONDO:0009783":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0005181"}}}


id: PBO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping enzyme, scavenger","termid":"PBO:0044641"}


id: PBO:0065253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20F, pseudogene","termid":"PBO:0065253"}


id: MOD:02055
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-serine residue","synonyms":[{"name":"XlnkSer","type":"exact"}],"termid":"MOD:02055"}


id: PATO:0001841
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is characterized by temporary abatement in severity.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remittent intensity","termid":"PATO:0001841"}


id: GO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a jasmonate + an L-alpha-amino acid + ATP = a jasmonyl-L-amino acid + AMP + diphosphate + H+. In Arabidopsis, isoleucine is the principal amino acid that conjugates with JA to form JA (JA-Ile). Other amino acid can be conjugated with JA such as valine, leucine, and phenylalanine.","definition_xrefs":["PMID:17291501","PMID:15258265","PMID:33821356","RHEA:55772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"jasmonoyl-L-amino acid ligase activity","secondary_identifiers":["EC:6.3.2.52"],"synonyms":[{"name":"ja-amino synthetase activity","type":"exact"},{"name":"jasmonate-amido synthetase activity","type":"exact"},{"name":"jasmonate-amino acid conjugate synthetase activity","type":"exact"},{"name":"jasmonate-amino acid synthetase activity","type":"exact"},{"name":"jasmonate-amino synthetase activity","type":"exact"},{"name":"jasmonate:amino acid synthetase activity","type":"exact"},{"name":"jasmonic acid-amino synthetase activity","type":"exact"},{"name":"jasmonyl-amino synthetase activity","type":"exact"}],"termid":"GO:0080123"}


id: PBO:0063632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 10","termid":"PBO:0063632"}


id: MONDO:0007006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the ulnar nerve from its origin in the brachial plexus to its termination in the hand. Clinical manifestations may include paresis or paralysis of wrist flexion, finger flexion, thumb adduction, finger abduction, and finger adduction. Sensation over the medial palm, fifth finger, and ulnar aspect of the ring finger may also be impaired. Common sites of injury include the axilla, cubital tunnel at the elbow, and Guyon's canal at the wrist. (From Joynt, Clinical Neurology, 1995, Ch51 pp43-5)","definition_xrefs":["MESH:D020424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ulnar neuropathy","secondary_identifiers":["EFO:1001224","MEDGEN:57596","DOID:4613","SCTID:359837005","UMLS:C0154743"],"synonyms":[{"name":"mononeuropathy of ulnar nerve","type":"exact"},{"name":"ulnar nerve mononeuropathy","type":"exact"},{"name":"ulnar neuropathy","type":"exact"},{"name":"ulnar neuropathy (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0007006","xrefs":{"Monarch":{"xref_id":"0007006"}}}


id: PBO:0044201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L","termid":"PBO:0044201"}


id: PBO:0067072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 101, pseudogene","termid":"PBO:0067072"}


id: MONDO:0100130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very severe form of acute pulmonary failure secondary to capillary permeability impairment. The symptoms include dyspnea, hypotension and multivisceral failure. The disease is characterized by bilateral pulmonary infiltrates and severe hypoxemia due to increased alveolar-capillary permeability. The severity depends on the degree of alveolar epithelial injury, with a mortality rate of 30-50%.","definition_xrefs":["Orphanet:70578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute respiratory distress syndrome","termid":"MONDO:0006502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult acute respiratory distress syndrome","secondary_identifiers":["MEDGEN:20540","GARD:18902","MESH:D012128","DOID:11394","SCTID:67782005","UMLS:C0035222","icd11.foundation:1466842111"],"synonyms":[{"name":"ARDS","type":"related"},{"name":"adult ARDS","type":"exact"},{"name":"adult RDS","type":"exact"},{"name":"adult acute respiratory distress syndrome","type":"exact"},{"name":"adult respiratory distress syndrome","type":"exact"},{"name":"adult respiratory distress syndrome, ARDS","type":"exact"},{"name":"respiratory distress syndrome, adult","type":"exact"}],"termid":"MONDO:0100130","xrefs":{"Monarch":{"xref_id":"0100130"}}}


id: MONDO:0010399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"},{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chromosome Xp21 deletion syndrome","secondary_identifiers":["UMLS:C4505291","MEDGEN:1373978","ICD9:277.6","SCTID:297257004","OMIM:300679","DOID:0060427","GARD:17246","Orphanet:261476"],"synonyms":[{"name":"Complex Glycerol kinase deficiency","type":"related"},{"name":"Del(X)(p21)","type":"exact"},{"name":"Glycerol kinase deficiency-contiguous gene syndrome","type":"exact"},{"name":"Xp21 contiguous gene deletion syndrome","type":"exact"},{"name":"Xp21 microdeletion syndrome","type":"exact"},{"name":"chromosome Xp21 deletion syndrome","type":"exact"},{"name":"complex glycerol kinase deficiency","type":"exact"},{"name":"monosomy Xp21","type":"exact"}],"termid":"MONDO:0010399","xrefs":{"Monarch":{"xref_id":"0010399"}}}


id: PBO:0066628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication timing regulatory factor 1","termid":"PBO:0066628"}


id: GO:1905045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:rph","PMID:22393241","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"down regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"down-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"downregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"inhibition of Schwann cell proliferation involved in axon regeneration","type":"narrow"}],"termid":"GO:1905045"}


id: MONDO:0019513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophageal malformation (obsolete MONDO:0019513)","secondary_identifiers":["Orphanet:88993","icd11.foundation:1999264345"],"termid":"MONDO:0019513","xrefs":{"Monarch":{"xref_id":"0019513"}}}


id: SO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_DNA_chromosome","synonyms":[{"name":"linear single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000959"}


id: PBO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Avt5","termid":"PBO:0003220"}


id: PBO:0068514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 105, pseudogene","termid":"PBO:0068514"}


id: GO:0031306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial outer membrane (obsolete GO:0031306)","synonyms":[{"name":"intrinsic to mitochondrial outer membrane","type":"narrow"}],"termid":"GO:0031306"}


id: PBO:0056502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain 4, DNA glycosylase","termid":"PBO:0056502"}


id: GO:0036107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).","definition_xrefs":["PMID:15695810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process","synonyms":[{"name":"4-amino-4-deoxy-alpha-L-arabinose undecaprenyl phosphate metabolic process","type":"exact"},{"name":"undecaprenyl phosphate alpha-L-Ara4N metabolism","type":"exact"}],"termid":"GO:0036107"}


id: PBO:0081536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 445","termid":"PBO:0081536"}


id: GO:0072139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glomerular parietal epithelial cell. Glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"}


id: PBO:0091590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (truncation) Wtf1","termid":"PBO:0091590"}


id: PBO:0072383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 9","termid":"PBO:0072383"}


id: GO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a granulosa cell, a supporting cell for the developing female gamete in the ovary of mammals.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell differentiation","termid":"GO:0060014"}


id: PBO:0075753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit beta","termid":"PBO:0075753"}


id: MONDO:0007616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibula, recurrent dislocation of head of","secondary_identifiers":["MEDGEN:338206","OMIM:135800","MESH:C565011","UMLS:C1851099"],"synonyms":[{"name":"fibula, recurrent dislocation of head of","type":"exact"}],"termid":"MONDO:0007616","xrefs":{"Monarch":{"xref_id":"0007616"}}}


id: MONDO:0007912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lithium transport","secondary_identifiers":["OMIM:152420","UMLS:C1835356","MEDGEN:331956"],"synonyms":[{"name":"lithium transport","type":"exact"}],"termid":"MONDO:0007912","xrefs":{"Monarch":{"xref_id":"0007912"}}}


id: GO:0018449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-1-phenylethanol + NAD+ = acetophenone + H+ + NADH.","definition_xrefs":["RHEA:28198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-phenylethanol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0032","EC:1.1.1.311"],"termid":"GO:0018449"}


id: PBO:0056520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mbt domain containing 1","termid":"PBO:0056520"}


id: MONDO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infection caused by the hepatitis C virus.","definition_xrefs":["NCIT:C3098"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis C virus infection","secondary_identifiers":["MEDGEN:42425","ICD9:070.41","ICD9:070.54","MESH:D006526","UMLS:C0019196","ICD9:070.7","DOID:1883","EFO:0003047","SCTID:128302006"],"synonyms":[{"name":"Hepatitis C virus caused hepatitis","type":"exact"},{"name":"Hepatitis C virus hepatitis","type":"exact"},{"name":"NANBH","type":"exact"},{"name":"chronic hepatitis C","type":"narrow"},{"name":"hepatitis C infection","type":"exact"},{"name":"hepatitis Nona nonB","type":"exact"},{"name":"hepatitis type C","type":"exact"},{"name":"non-A, non-B Hepatitis","type":"exact"},{"name":"viral hepatitis C","type":"exact"}],"termid":"MONDO:0005231","xrefs":{"Monarch":{"xref_id":"0005231"}}}


id: MONDO:0054813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic-like, 2","secondary_identifiers":["MEDGEN:1632001","OMIM:618000","Orphanet:536532","UMLS:C4693870","DOID:0080732","GARD:17975"],"synonyms":[{"name":"EDSCLL2","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic-like, 2","type":"exact"}],"termid":"MONDO:0054813","xrefs":{"Monarch":{"xref_id":"0054813"}}}


id: MONDO:0011412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that is characterized by intraneuronal inclusions of mutant neuroserpin resulting in progressive encephalopathy, dementia and seizures and has material basis in a mutation in the SERPINI1 gene inherited in an in autosomal dominant pattern.","definition_xrefs":["DOID:0050831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial encephalopathy with neuroserpin inclusion bodies","secondary_identifiers":["MEDGEN:346965","ICD9:348.39","icd11.foundation:453919434","NORD:1123","OMIM:604218","Orphanet:85110","MESH:C536841","GARD:10037","SCTID:702421006","UMLS:C1858680"],"synonyms":[{"name":"FENIB","type":"exact"},{"name":"encephalopathy, familial, with Collins bodies","type":"related"},{"name":"encephalopathy, familial, with neuroserpin inclusion bodies","type":"related"}],"termid":"MONDO:0011412","xrefs":{"Monarch":{"xref_id":"0011412"}}}


id: GO:0034112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"positively_regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of homotypic cell-cell adhesion","termid":"GO:0034112"}


id: PBO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 50, NatE catalytic subunit","termid":"PBO:0060413"}


id: PBO:0005157
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calnexin Independence Factor","termid":"PBO:0005157"}


id: MONDO:0004809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cannabis abuse (obsolete MONDO:0004809)","termid":"MONDO:0004809","xrefs":{"Monarch":{"xref_id":"0004809"}}}


id: FYPO:0007884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which Lms2-8 complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33378677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abolished Lsm2-8 complex binding","synonyms":[{"name":"Lsm2-8 complex binding abolished","type":"exact"}],"termid":"FYPO:0007884"}


id: MONDO:0020173
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palpebral epidermal tumor","termid":"MONDO:0020172"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"benign tumor of palpebral epidermis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98582"],"synonyms":[{"name":"skin of eyelid benign neoplasm","type":"exact"}],"termid":"MONDO:0020173","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020173"}}}


id: GO:0034074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = marneral.","definition_xrefs":["GOC:cb","PMID:16425307","PMID:18033581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"marneral synthase activity","secondary_identifiers":["RHEA:31875","MetaCyc:RXN-9664"],"termid":"GO:0034074"}


id: GO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glutamate and transmitting the signal across the membrane by activating the alpha-subunit of an associated heterotrimeric G-protein complex to inhibit downstream adenylate cyclase activity.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor activity","termid":"GO:0098988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","synonyms":[{"name":"adenylate cyclase inhibiting metabotropic glutamate receptor activity","type":"related"},{"name":"adenylyl cyclase inhibiting metabotropic glutamate receptor activity","type":"exact"}],"termid":"GO:0001640"}


id: GO:1901599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-pinoresinol.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(-)-pinoresinol metabolic process","termid":"GO:1901598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(-)-pinoresinol biosynthetic process","synonyms":[{"name":"(-)-pinoresinol anabolism","type":"exact"},{"name":"(-)-pinoresinol biosynthesis","type":"exact"},{"name":"(-)-pinoresinol formation","type":"exact"},{"name":"(-)-pinoresinol synthesis","type":"exact"}],"termid":"GO:1901599"}


id: MONDO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adrenomyodystrophy is an extremely rare genetic endocrine disease characterized by primary adrenal insufficiency, dystrophic myopathy, hepatic steatosis, severe psychomotor delay, megalocornea, failure to thrive, chronic constipation, and terminal bladder ectasia which can lead to death. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:977"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomyodystrophy","secondary_identifiers":["GARD:562","icd11.foundation:46666832","MESH:C538051","MEDGEN:337494","OMIM:300270","SCTID:763311001","UMLS:C1846044"],"synonyms":[{"name":"adrenomyodystrophy","type":"exact"}],"termid":"MONDO:0010288","xrefs":{"Monarch":{"xref_id":"0010288"}}}


id: MONDO:0016323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic respiratory distress with surfactant metabolism deficiency","secondary_identifiers":["Orphanet:217566","UMLS:C5190853","GARD:17127","MEDGEN:1679491"],"termid":"MONDO:0016323","xrefs":{"Monarch":{"xref_id":"0016323"}}}


id: PBO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 28","termid":"PBO:0039508"}


id: PBO:0056319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K4 antisense RNA 1","termid":"PBO:0056319"}


id: MONDO:0004059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pain or discomfort caused by exposure of the dentin layer of tooth to thermal, tactile, or other stimuli.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin sensitivity","secondary_identifiers":["SCTID:13468005","UMLS:C0011432","MESH:D003807","DOID:698","MEDGEN:41477"],"synonyms":[{"name":"sensitive dentin","type":"exact"}],"termid":"MONDO:0004059","xrefs":{"Monarch":{"xref_id":"0004059"}}}


id: PBO:0055018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2433","termid":"PBO:0055018"}


id: PBO:0075954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor molecule 2","termid":"PBO:0075954"}


id: FYPO:0007068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin located in heterochromatin at subtelomeric regions is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PomBase:mah","PMID:18093330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased origin firing efficiency","termid":"FYPO:0001249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"increased origin firing efficiency in subtelomeric heterochromatin","synonyms":[{"name":"increased origin firing efficiency at subtelomeric heterochromatin","type":"exact"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased origin firing efficiency in telomeric heterochromatin","type":"related"}],"termid":"FYPO:0007068"}


id: GO:0099633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. post synaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic membrane","termid":"GO:1903539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to postsynaptic specialization membrane","synonyms":[{"name":"protein localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099633"}


id: PBO:0061265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notochord homeobox","termid":"PBO:0061265"}


id: GO:0030205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dermatan sulfate metabolic process (obsolete GO:0030205)","synonyms":[{"name":"chondroitin sulfate B metabolic process","type":"exact"},{"name":"chondroitin sulfate B metabolism","type":"exact"},{"name":"dermatan sulfate metabolism","type":"exact"},{"name":"dermatan sulphate metabolic process","type":"exact"},{"name":"dermatan sulphate metabolism","type":"exact"}],"termid":"GO:0030205"}


id: PR:Q9P3U0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Ubp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.06","synonyms":[{"name":"SPAC328.06","type":"related"},{"name":"Spom972h-ubp2","type":"exact"},{"name":"deubiquitinating enzyme 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U0"}


id: PBO:0114092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp8","termid":"PBO:0114092"}


id: PBO:0068551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2, pseudogene","termid":"PBO:0068551"}


id: PBO:0059017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 3","termid":"PBO:0059017"}


id: MONDO:1012829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle due to a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, cattle","termid":"MONDO:1011541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, DSP-related, cattle","secondary_identifiers":["OMIA:002243-9913"],"termid":"MONDO:1012829","xrefs":{"Monarch":{"xref_id":"1012829"}}}


id: PBO:0031452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_distribution","termid":"PBO:0031452"}


id: PBO:0068059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 364","termid":"PBO:0068059"}


id: PBO:0027915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0027915"}


id: PBO:0076898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 52","termid":"PBO:0076898"}


id: PBO:0040447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10A (putative)","termid":"PBO:0040447"}


id: MONDO:0859185
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86567],"is_not":false,"summary":null,"term":"MONDO:0859185"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and dysmorphic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619503","UMLS:C5561974","MEDGEN:1794184"],"termid":"MONDO:0859185","terms_by_termid":{"MONDO:0859185":null},"xrefs":{"Monarch":{"xref_id":"0859185"}}}


id: FYPO:0006254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of ribosomal footprint lengths in a cell differs from wild type. Ribosomal footprints are RNA fragments protected by the ribosome, and normally range from 28-31 nucleotides long.","definition_xrefs":["PMID:28945192","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal ribosome footprint size distribution","synonyms":[{"name":"abnormal ribosome footprint length distribution","type":"exact"},{"name":"abnormal ribosome footprint size distribution during mitotic cell cycle","type":"related"},{"name":"abnormal ribosome footprint size distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006254"}


id: GO:0046574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucuronosides, yielding free glucuronic acid.","definition_xrefs":["PMID:12044176","PMID:10441389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glycuronidase activity","synonyms":[{"name":"glucuronyl hydrolase activity","type":"exact"}],"termid":"GO:0046574"}


id: MONDO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that involves the ureter.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"ureter cancer","termid":"MONDO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"ureteral lymphoma","secondary_identifiers":["MEDGEN:234458","NCIT:C6175","DOID:14489","UMLS:C1336876"],"synonyms":[{"name":"lymphoma of the ureter","type":"exact"},{"name":"lymphoma of ureter","type":"exact"},{"name":"primary ureter lymphoma","type":"exact"},{"name":"ureter lymphoma","type":"exact"},{"name":"ureteral lymphoma","type":"exact"}],"termid":"MONDO:0001977","xrefs":{"Monarch":{"xref_id":"0001977"}}}


id: MONDO:1010494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, sheep","secondary_identifiers":["OMIA:001041-9940"],"termid":"MONDO:1010494","xrefs":{"Monarch":{"xref_id":"1010494"}}}


id: SO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_artifact","synonyms":[{"name":"insertion artifact","type":"exact"}],"termid":"SO:0002175"}


id: GO:1990409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to adrenomedullin (AM).","definition_xrefs":["GOC:bhm","PMID:10882736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adrenomedullin binding","synonyms":[{"name":"AM binding","type":"exact"}],"termid":"GO:1990409"}


id: PBO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 3","termid":"PBO:0072274"}


id: MONDO:0007035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanotic cutaneous lesion that develops in the axilla and other body folds. It may be idiopathic, drug-induced, or it may be associated with the presence of an endocrine disorder or malignancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acanthosis nigricans","secondary_identifiers":["ICD10CM:L83","DOID:3138","icd11.foundation:71488193","MESH:D000052","MEDGEN:54","NCIT:C26687","HP:0000956","Wikipedia:Acanthosis_nigricans","SCTID:402599005","UMLS:C0000889","Orphanet:924","EFO:1000660"],"synonyms":[{"name":"acanthosis nigricans","type":"exact"},{"name":"acanthosis nigricans (disease)","type":"exact"},{"name":"an - acanthosis nigricans","type":"exact"},{"name":"keratosis nigricans","type":"exact"}],"termid":"MONDO:0007035","xrefs":{"Monarch":{"xref_id":"0007035"}}}


id: PBO:0080825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAE1 maturation factor of ABCE1","termid":"PBO:0080825"}


id: SO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified inosine is an inosine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine","termid":"SO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_inosine","synonyms":[{"name":"modified inosine","type":"exact"}],"termid":"SO:0001274"}


id: GO:0047184
data:
  {"annotated_genes":["SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77191],"is_not":false,"summary":null,"term":"GO:0047184"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA.","definition_xrefs":["MetaCyc:2.3.1.23-RXN","EC:2.3.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-acylglycerophosphocholine O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0000507","RHEA:12937","Reactome:R-HSA-1482794"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphocholine acyltransferase activity","type":"related"},{"name":"acyl coenzyme A-monoacylphosphatidylcholine acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-glycero-3-phosphocholine transacylase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycero-3-phosphocholine O-acyltransferase activity","type":"related"},{"name":"lysolecithin acyltransferase activity","type":"related"},{"name":"lysophosphatide acyltransferase activity","type":"related"},{"name":"lysophosphatidylcholine acyltransferase activity","type":"related"}],"termid":"GO:0047184","terms_by_termid":{"GO:0047184":null}}


id: MONDO:0021079
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising during childhood.","definition_xrefs":["NCIT:C6283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"childhood neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1368871","MEDGEN:237153"],"synonyms":[{"name":"childhood neoplasm","type":"exact"},{"name":"childhood neoplasm (disease)","type":"exact"},{"name":"childhood tumor","type":"exact"},{"name":"childhood tumour","type":"exact"},{"name":"neoplasm (disease) of childhood","type":"exact"},{"name":"paediatric neoplasm","type":"exact"},{"name":"paediatric neoplasm (disease)","type":"exact"},{"name":"paediatric tumour","type":"exact"},{"name":"pediatric neoplasm","type":"exact"},{"name":"pediatric neoplasm (disease)","type":"exact"},{"name":"pediatric tumor","type":"exact"}],"termid":"MONDO:0021079","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0021079"}}}


id: MOD:02064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an D-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine (Ser)","termid":"MOD:00202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked D-serine residue","synonyms":[{"name":"XlnkDSer","type":"exact"}],"termid":"MOD:02064"}


id: PBO:0036066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_membrane_biogenesis_involved_in_mitosis","termid":"PBO:0036066"}


id: PBO:0069359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 619, pseudogene","termid":"PBO:0069359"}


id: MONDO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete organ system cancer (obsolete MONDO:0000403)","termid":"MONDO:0000403","xrefs":{"Monarch":{"xref_id":"0000403"}}}


id: PBO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor homolog (predicted)","termid":"PBO:0004085"}


id: MONDO:0006458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Also known as well-differentiated thymic carcinoma, atypical thymoma, or epithelial thymoma, this type of thymoma displays morphologic characteristics of a well-differentiated carcinoma. The majority of cases occur in the anterior mediastinum as Masaoka stage II or stage III tumors. It is almost always invasive, it recurs frequently, and metastasizes in approximately 20% of the cases.","definition_xrefs":["NCIT:C7997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma type B","termid":"MONDO:0016974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymoma type B3","secondary_identifiers":["DOID:7926","EFO:1000583","ICDO:8585/1","UMLS:C0279705","MEDGEN:124648","ICDO:8585/3"],"synonyms":[{"name":"atypical thymoma","type":"exact"},{"name":"epithelial malignant thymoma","type":"exact"},{"name":"epithelial thymoma","type":"exact"},{"name":"malignant thymoma type B3","type":"exact"},{"name":"squamoid thymoma","type":"exact"},{"name":"thymoma type B3","type":"exact"},{"name":"thymoma, epithelial","type":"exact"},{"name":"well differentiated thymic carcinoma","type":"exact"},{"name":"well-differentiated thymic carcinoma","type":"exact"}],"termid":"MONDO:0006458","xrefs":{"Monarch":{"xref_id":"0006458"}}}


id: PATO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001093 relative flux value (obsolete PATO:0001093)","termid":"PATO:0001093"}


id: MONDO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the prostate gland. This category includes carcinoid tumors and small cell carcinomas.","definition_xrefs":["NCIT:C5545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"prostate neoplasm","termid":"MONDO:0021259"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate neuroendocrine neoplasm","secondary_identifiers":["DOID:2992","MEDGEN:277537","ONCOTREE:PRNE","UMLS:C1335515"],"synonyms":[{"name":"neuroendocrine neoplasm of prostate","type":"exact"},{"name":"neuroendocrine neoplasm of prostate gland","type":"exact"},{"name":"neuroendocrine neoplasm of the prostate","type":"exact"},{"name":"neuroendocrine tumor of the prostate","type":"exact"},{"name":"neuroendocrine tumour of the prostate","type":"exact"},{"name":"prostate gland NET","type":"exact"},{"name":"prostate gland neuroendocrine neoplasm","type":"exact"},{"name":"prostate gland neuroendocrine tumor","type":"exact"},{"name":"prostate gland neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"prostate gland neuroendocrine tumour","type":"exact"},{"name":"prostate neuroendocrine carcinoma","type":"related"},{"name":"prostate neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0002477","xrefs":{"Monarch":{"xref_id":"0002477"}}}


id: MONDO:0019464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heavy-chain diseases (HCDs) are rare monoclonal lymphoplasma-cell proliferative disorders involving B cells and are characterized by the synthesis of truncated heavy chains without associated light chains.","definition_xrefs":["Orphanet:86864"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"heavy chain disease","secondary_identifiers":["GARD:19074","ICD10CM:C88.3","ICD9:273.2","EFO:1001341","MedDRA:10019350","MEDGEN:5469","MESH:D006362","NCIT:C3082","DOID:0060125","SCTID:68979007","ICDO:9762/3","ICD10CM:C88.2","UMLS:C0018852"],"synonyms":[{"name":"HCD","type":"exact"},{"name":"heavy chain disease","type":"exact"}],"termid":"MONDO:0019464","xrefs":{"Monarch":{"xref_id":"0019464"}}}


id: FYPO:0006966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular acetyl-CoA level","synonyms":[{"name":"increased acetyl-CoA accumulation","type":"related"},{"name":"increased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetyl-CoA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006966"}


id: MONDO:0859188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain abnormalities","secondary_identifiers":["UMLS:C5561979","MEDGEN:1794189","OMIM:619517"],"termid":"MONDO:0859188","xrefs":{"Monarch":{"xref_id":"0859188"}}}


id: PBO:0056926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase pseudogene 1","termid":"PBO:0056926"}


id: MONDO:0011139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic embryopathy","termid":"MONDO:0016018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial hallucal polydactyly","secondary_identifiers":["MEDGEN:356507","OMIM:601759","MESH:C566632","UMLS:C1866339"],"synonyms":[{"name":"preaxial hallucal polydactyly","type":"exact"}],"termid":"MONDO:0011139","xrefs":{"Monarch":{"xref_id":"0011139"}}}


