# terms

id: MONDO:0000631
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"A neoplasm that arises from the bone or articular cartilage and does not invade adjacent tissues or metastasize to other anatomic sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"bone benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:213.9","MEDGEN:146337","SCTID:92027006","NCIT:C4880","UMLS:C0684516","DOID:0060094"],"synonyms":[{"name":"benign bone neoplasm","type":"exact"},{"name":"benign bone tumor","type":"exact"},{"name":"benign bone tumour","type":"exact"},{"name":"benign neoplasm of bone","type":"exact"},{"name":"benign neoplasm of the bone","type":"exact"},{"name":"benign osseous neoplasm","type":"exact"},{"name":"benign osseous tumor","type":"exact"},{"name":"benign osseous tumour","type":"exact"},{"name":"benign tumor of bone","type":"exact"},{"name":"benign tumor of the bone","type":"exact"},{"name":"benign tumour of bone","type":"exact"},{"name":"benign tumour of the bone","type":"exact"},{"name":"bone tissue benign neoplasm","type":"exact"}],"termid":"MONDO:0000631","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000631"}}}


id: PR:O74113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDC45-related protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10507:SF0","PRO:DNx","OMA:SCHPO01953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 45 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.02","secondary_identifiers":["UniProtKB:O74113"],"synonyms":[{"name":"Spom972h-CDC45","type":"exact"},{"name":"suppressor of nda4 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74113"}


id: GO:0140651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation and dephosphorylation of creatine in a futile cycle, which dissipates the high energy charge of phosphocreatine as heat without performing any mechanical or chemical work. The futile creatine cycle takes place in thermogenic fat cells and is part of adaptive thermogenesis.","definition_xrefs":["PMID:33981039","PMID:33597756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"adaptive thermogenesis","termid":"GO:1990845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"futile creatine cycle","termid":"GO:0140651"}


id: GO:0050517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: ATP + 1D-myo-inositol hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate, and ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + diphospho-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol hexakisphosphate kinase activity (obsolete GO:0050517)","synonyms":[{"name":"inositol hexakisphosphate kinase activity","type":"exact"},{"name":"inositol-hexakisphosphate kinase activity","type":"exact"}],"termid":"GO:0050517"}


id: PBO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase Dak1","termid":"PBO:0000819"}


id: GO:0033992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-fructose = 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose + H2O.","definition_xrefs":["EC:4.2.1.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose dehydratase activity","secondary_identifiers":["RHEA:15725","MetaCyc:4.2.1.111-RXN"],"synonyms":[{"name":"1,5-anhydro-D-arabino-hex-2-ulose dehydratase activity","type":"related"},{"name":"1,5-anhydro-D-fructose 4-dehydratase activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase (ascopyrone-M-forming) activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydrolyase activity","type":"related"},{"name":"AF dehydratase activity","type":"related"},{"name":"AFDH","type":"related"}],"termid":"GO:0033992"}


id: PBO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_structure","termid":"PBO:0036010"}


id: FYPO:0003813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is normal (i.e. indistinguishable from wild type) near the promoter regions of genes that are expressed in response to stress. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleosome positioning at stress response genes","synonyms":[{"name":"normal nucleosome occupancy at stress response genes","type":"related"},{"name":"normal nucleosome positioning at stress response genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning at stress response genes during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing at stress response genes","type":"exact"}],"termid":"FYPO:0003813"}


id: GO:0018446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pinocarveol = pinocarvone + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pinocarveol dehydrogenase activity (obsolete GO:0018446)","termid":"GO:0018446"}


id: FYECO:0000248
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119554,119674],"is_not":false,"summary":null,"term":"FYECO:0000248"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which latrunculin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ latA","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"+ latrunculin A","type":"related"}],"termid":"FYECO:0000248","terms_by_termid":{"FYECO:0000248":null,"FYPO_EXT:0000001":null}}


id: PR:O94449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00352","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.03c","secondary_identifiers":["UniProtKB:O94449"],"synonyms":[{"name":"Spom972h-RFC2","type":"exact"},{"name":"replication factor C4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94449"}


id: MOD:01288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:255#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +28","termid":"MOD:00578"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28 - site H","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:01288"}


id: GO:0043505
data:
  {"annotated_genes":["SJAG_00307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102380],"is_not":false,"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"A form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).","definition_xrefs":["PMID:15175412","PMID:16183641","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"},{"relation_name":"part_of","term_name":"CENP-A containing chromatin","termid":"GO:0061638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"CENP-A containing nucleosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CENP-S-T-W-X","type":"exact"},{"name":"CNP-T-W-S-X complex","type":"exact"},{"name":"CenH3 containing nucleosome","type":"exact"},{"name":"centromere specific nucleosome","type":"related"},{"name":"centromere-specific nucleosome","type":"related"},{"name":"centromeric nucleosome","type":"related"}],"termid":"GO:0043505","terms_by_termid":{"GO:0043505":null}}


id: MONDO:0016159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Gemignani syndrome","secondary_identifiers":["UMLS:C2931587","GARD:2451","MEDGEN:444093","MESH:C537678","Orphanet:2074"],"synonyms":[{"name":"spinocerebellar ataxia associated amyotrophy of the hands and sensorineural deafness","type":"related"},{"name":"spinocerebellar ataxia-amyotrophy-deafness syndrome","type":"exact"}],"termid":"MONDO:0016159","xrefs":{"Monarch":{"xref_id":"0016159"}}}


id: PBO:0081655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 580","termid":"PBO:0081655"}


id: GO:0010862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of pathway-restricted SMAD protein phosphorylation. Pathway-restricted SMAD proteins and common-partner SMAD proteins are involved in the transforming growth factor beta receptor signaling pathways.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pathway-restricted SMAD protein phosphorylation (obsolete GO:0010862)","termid":"GO:0010862"}


id: PBO:0059488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B3","termid":"PBO:0059488"}


id: MONDO:0015353
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85676],"is_not":false,"summary":null,"term":"MONDO:0015353"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, type 5","termid":"MONDO:0100350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111204","GARD:18266","OMIM:600794"],"synonyms":[{"name":"HMN 5A","type":"exact"},{"name":"HMN5A","type":"exact"},{"name":"dHMN 5A","type":"exact"},{"name":"dHMN5","type":"broad"},{"name":"distal HMN V","type":"broad"},{"name":"distal hereditary motor neuropathy type V","type":"broad"},{"name":"distal spinal muscular atrophy type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5A","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type VA","type":"exact"},{"name":"neuropathy, distal hereditary motor, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, type 5","type":"broad"},{"name":"spinal muscular atrophy, distal, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, with upper limb predominance","type":"exact"}],"termid":"MONDO:0015353","terms_by_termid":{"MONDO:0015353":null},"xrefs":{"Monarch":{"xref_id":"0015353"}}}


id: GO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipoprotein oxidation","termid":"GO:0034443"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipoprotein lipid oxidation","termid":"GO:0060587"},{"relation_name":"negatively_regulates","term_name":"lipoprotein lipid oxidation","termid":"GO:0034439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of lipoprotein lipid oxidation","termid":"GO:0060588"}


id: PBO:0054816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2229","termid":"PBO:0054816"}


id: GO:1905245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GOC:jl","GO_REF:0000059","PMID:21745575"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of aspartic-type peptidase activity (obsolete GO:1905245)","termid":"GO:1905245"}


id: MONDO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign paroxysmal torticollis of infancy (BPTI) is a rare functional disorder characterized by recurrent episodes of torticollic posturing of the head (inclination or tilting of the head to one side) in healthy children.","definition_xrefs":["Orphanet:71518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"benign paroxysmal torticollis of infancy","secondary_identifiers":["GARD:18913","SCTID:719521002","UMLS:C3494934","icd11.foundation:545726308","MEDGEN:782128"],"termid":"MONDO:0019113","xrefs":{"Monarch":{"xref_id":"0019113"}}}


id: PBO:0078468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-6","termid":"PBO:0078468"}


id: PBO:0052197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 1","termid":"PBO:0052197"}


id: PBO:0084306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter, mediates Fe2+ transport across inner mito membrane; mitochondrial carrier family member; active under low-iron conditions; may transport other cations; MRS3 has a paralog, MRS4, that arose from the whole genome duplication","termid":"PBO:0084306"}


id: GO:0102695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + cis-zeatin-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:cis-zeatin 7-N-glucosyltransferase activity (obsolete GO:0102695)","termid":"GO:0102695"}


id: GO:0021913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","PMID:11262869","GOC:cls","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification (obsolete GO:0021913)","termid":"GO:0021913"}


id: GO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 2'-O-methyluracil.","definition_xrefs":["PMID:25626150"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (uracil-2'-O-)-methyltransferase activity (obsolete GO:0052665)","termid":"GO:0052665"}


id: PBO:0067456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 581, pseudogene","termid":"PBO:0067456"}


id: PBO:0027476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_monensin","termid":"PBO:0027476"}


id: GO:1901608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle transport along microtubule","synonyms":[{"name":"regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901608"}


id: FYPO:0000867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000866"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000867"}


id: GO:0160227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligosaccharyltransferase complex that contains STT3B as the catalytic subunit.","definition_xrefs":["PMID:31831667","PMID:39509507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyltransferase complex","termid":"GO:0008250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"oligosaccharyltransferase complex B","synonyms":[{"name":"OST-B","type":"exact"}],"termid":"GO:0160227"}


id: PBO:0028901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028901"}


id: GO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Inner arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. The structure of inner dynein arms is complex and may vary within the axoneme. Inner dynein arms are heteromeric, comprising 8 different heavy chains and various subunits. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["GOC:BHF","PMID:19347929","GOC:vk","PMID:2557057","PMID:7962092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"inner dynein arm","synonyms":[{"name":"inner dynein arm complex","type":"exact"}],"termid":"GO:0036156"}


id: PBO:0059451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 3","termid":"PBO:0059451"}


id: PBO:0011116
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein LIc","termid":"PBO:0011116"}


id: MONDO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermoid cyst that involves the nose.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"facial dermoid cyst","termid":"MONDO:0015380"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal dermoid cyst","secondary_identifiers":["OMIM:600679","Orphanet:141103","GARD:16970","MEDGEN:371575","MESH:C563455","UMLS:C1833473"],"synonyms":[{"name":"dermoid cysts, familial frontonasal","type":"related"},{"name":"nasal dermoid sinus cyst","type":"exact"}],"termid":"MONDO:0010921","xrefs":{"Monarch":{"xref_id":"0010921"}}}


id: PBO:0027840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase_during_nitrogen_limitation","termid":"PBO:0027840"}


id: MONDO:0017935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperinsulinism due to HNF1A deficiency is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI), characterized by transient or persistent hyperinsulinemic hypoglycemia (HH) in infancy that is responsive to diazoxide, evolving in to maturity-onset diabetes of the young subtype 1 (MODY-1) later in life.","definition_xrefs":["Orphanet:324575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinism due to HNF1A deficiency","secondary_identifiers":["GARD:21444","SCTID:721234004","UMLS:C4303475","MEDGEN:929144"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia due to HNF1A deficiency","type":"exact"}],"termid":"MONDO:0017935","xrefs":{"Monarch":{"xref_id":"0017935"}}}


id: PBO:0045976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 2","termid":"PBO:0045976"}


id: MONDO:0010029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition in which there is complete right-to-left reversal of the position of the major thoracic and abdominal organs (that is, they are arranged in a mirror image of the normal positioning).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus","secondary_identifiers":["Orphanet:101063","HP:0001696","icd11.foundation:797648408","MESH:D012857","NCIT:C87121","ICD10CM:Q89.3","ICD9:759.3","GARD:4883","DOID:758","MEDGEN:1642262","SCTID:24614000","UMLS:C4551493","ICD9:759.89"],"synonyms":[{"name":"complete situs inversus","type":"exact"},{"name":"complete situs inversus viscerum","type":"exact"},{"name":"complete transposition (morphologic abnormality)","type":"exact"},{"name":"laterality sequence","type":"exact"},{"name":"situs ambiguus","type":"related"},{"name":"situs inversus","type":"exact"},{"name":"situs inversus totalis","type":"exact"},{"name":"situs inversus totalis (disease)","type":"exact"}],"termid":"MONDO:0010029","xrefs":{"Monarch":{"xref_id":"0010029"}}}


id: PBO:0049032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 19","termid":"PBO:0049032"}


id: PBO:0056013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM8 homolog, U6 small nuclear RNA associated","termid":"PBO:0056013"}


id: FYPO:0008224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which trimethylation of lysine at position 20 of histone H4 is decreased.","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4-K20 trimethylation during vegetative growth","termid":"FYPO:0004224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H4-K20 trimethylation during mitotic G2/M phase","termid":"FYPO:0008224"}


id: PBO:0070863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 1","termid":"PBO:0070863"}


id: MONDO:0008710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Carpenter syndrome in which the cause of the disease is a mutation in the RAB23 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Carpenter syndrome","termid":"MONDO:0019012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"RAB23-related Carpenter syndrome","secondary_identifiers":["GARD:15128","OMIM:201000","SCTID:205813009","UMLS:C4551510","MEDGEN:1644017"],"synonyms":[{"name":"ACPS 2","type":"broad"},{"name":"CARPENTER syndrome 1","type":"related"},{"name":"CRPT1","type":"related"},{"name":"Carpenter syndrome","type":"broad"},{"name":"Carpenter syndrome 1","type":"exact"},{"name":"Carpenter syndrome caused by mutation in RAB23","type":"exact"},{"name":"Carpenter syndrome type 1","type":"exact"},{"name":"RAB23 Carpenter syndrome","type":"exact"},{"name":"RAB23-related Carpenter syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 2","type":"broad"}],"termid":"MONDO:0008710","xrefs":{"Monarch":{"xref_id":"0008710"}}}


id: MONDO:0100100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathy caused by pathogenic variants in SELENON that is congenital or present early in childhood with neonatal hypotonia, delayed motor development, axial muscle weakness, scoliosis, and significant respiratory involvement. Spinal rigidity of varying severity is often present.","definition_xrefs":["PMID:12192640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"SELENON-related myopathy","synonyms":[{"name":"SELENON-related myopathy","type":"exact"},{"name":"SEPN1-related myopathy","type":"exact"}],"termid":"MONDO:0100100","xrefs":{"Monarch":{"xref_id":"0100100"}}}


id: PBO:0004094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RNA-binding protein 1","termid":"PBO:0004094"}


id: GO:1900183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"regulation of xanthone biosynthesis","type":"narrow"},{"name":"regulation of xanthone biosynthetic process","type":"narrow"},{"name":"regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"regulation of xanthone-containing compound formation","type":"exact"},{"name":"regulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900183"}


id: MONDO:0020104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare constitutional hemolytic anemia due to an enzyme disorder (obsolete MONDO:0020104)","secondary_identifiers":["Orphanet:98369"],"termid":"MONDO:0020104","xrefs":{"Monarch":{"xref_id":"0020104"}}}


id: GO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of hairs in the imaginal disc-derived wing along a proximal-distal axis, such that each cell of the wing produces one wing hair which points in a distal direction.","definition_xrefs":["GOC:mtg_sensu","PMID:11239465","GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of imaginal disc-derived wing hair orientation","synonyms":[{"name":"establishment of wing hair orientation","type":"exact"}],"termid":"GO:0001737"}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: PBO:0082985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aldehyde dehydrogenase; activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for conversion of acetaldehyde to acetate; constitutively expressed; locates to the mitochondrial outer surface upon oxidative stress","termid":"PBO:0082985"}


id: GO:1901622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smoothened signaling pathway","termid":"GO:0045880"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"activation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901622"}


id: PBO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 8","termid":"PBO:0047175"}


id: PBO:0050962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 4 (gene/pseudogene)","termid":"PBO:0050962"}


id: PR:O13683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11E3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11E3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.02c","synonyms":[{"name":"Spom972h-SPAC11E3.02c","type":"exact"}],"termid":"PR:O13683"}


id: MONDO:1012144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, turkey","secondary_identifiers":["OMIA:000621-9103"],"termid":"MONDO:1012144","xrefs":{"Monarch":{"xref_id":"1012144"}}}


id: GO:1900006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron projection development","termid":"GO:0010976"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite development","synonyms":[{"name":"up regulation of dendrite development","type":"related"}],"termid":"GO:1900006"}


id: GO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosterone","synonyms":[{"name":"response to corticosterone stimulus","type":"exact"}],"termid":"GO:0051412"}


id: FYPO:0001050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis at the same size as wild type.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe, normal size cell (obsolete FYPO:0001050)","synonyms":[{"name":"mitotic catastrophe, normal size cell during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe, normal size cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001050"}


id: PBO:0004125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 (predicted)","termid":"PBO:0004125"}


id: PBO:0074127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 10","termid":"PBO:0074127"}


id: PBO:0062718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily P member 1 pseudogene","termid":"PBO:0062718"}


id: GO:0010969
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"regulates","term_name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0000750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010969","terms_by_termid":{"GO:0090029":null}}


id: SO:0000120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that, at least in part, encodes one or more proteins.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding_primary_transcript","synonyms":[{"name":"pre mRNA","type":"related"},{"name":"protein coding primary transcript","type":"exact"}],"termid":"SO:0000120"}


id: MONDO:0011386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microvascular complications of diabetes, susceptibility in which the cause of the disease is a mutation in the VEGFA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvascular complications of diabetes, susceptibility","termid":"MONDO:0000065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility to, 1","secondary_identifiers":["UMLS:C2676832","OMIM:603933","MEDGEN:382957"],"synonyms":[{"name":"MVCD1","type":"related"},{"name":"VEGFA microvascular complications of diabetes, susceptibility","type":"exact"},{"name":"end-stage renal disease, diabetic, susceptibility to","type":"related"},{"name":"microvascular complications of diabetes 1","type":"exact"},{"name":"microvascular complications of diabetes, protection against","type":"related"},{"name":"microvascular complications of diabetes, susceptibility caused by mutation in VEGFA","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to","type":"related"},{"name":"microvascular complications of diabetes, susceptibility to, 1","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, type 1","type":"exact"},{"name":"nephropathy, diabetic, susceptibility to","type":"related"},{"name":"neuropathy, diabetic, susceptibility to","type":"related"},{"name":"nonproliferative retinopathy, diabetic, susceptibility to","type":"related"},{"name":"proliferative retinopathy, diabetic, susceptibility to","type":"related"}],"termid":"MONDO:0011386","xrefs":{"Monarch":{"xref_id":"0011386"}}}


id: GO:0019001
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id: FYPO:0002414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen vegetative cell","synonyms":[{"name":"inviable enlarged vegetative cell","type":"related"},{"name":"inviable large vegetative cell","type":"related"},{"name":"inviable swollen cell during vegetative growth","type":"exact"},{"name":"inviable swollen vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with increased cell size","type":"related"},{"name":"inviable vegetative cell with increased cell volume","type":"exact"},{"name":"lethal; swollen vegetative cell","type":"exact"}],"termid":"FYPO:0002414"}


id: GO:0031903
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  {"annotated_genes":["SJAG_03324","SJAG_02619","SJAG_05950","SJAG_03464","SJAG_03493","SJAG_00947","SJAG_03715","SJAG_01165","SJAG_01685","SJAG_00702","SJAG_02693","SJAG_04428","SJAG_04315","SJAG_03781","SJAG_04763","SJAG_04146","SJAG_02997","SJAG_03440","SJAG_00891"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115602,75892,58780,116062,78096,118476,97287,98897,73724,70949,80534,72100,74156,76106,90765,78841,79904,107007,78379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"microbody membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031903","terms_by_termid":{"GO:0005778":null}}


id: _global:seeAlso
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seeAlso","secondary_identifiers":["http://www.w3.org/2000/01/rdf-schema#seeAlso"],"termid":"_global:seeAlso","xrefs":{"Monarch":{"xref_id":"seeAlso"}}}


id: PBO:0040006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL14EP pseudogene 1","termid":"PBO:0040006"}


id: MONDO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"deficiency anemia","termid":"MONDO:0001639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"protein-deficiency anemia","secondary_identifiers":["DOID:13120","ICD10CM:D53.0","SCTID:191156009","UMLS:C0154290","ICD9:281.4","MEDGEN:509568"],"synonyms":[{"name":"anaemia due to protein deficiency","type":"exact"},{"name":"anemia due to protein deficiency","type":"exact"}],"termid":"MONDO:0001638","xrefs":{"Monarch":{"xref_id":"0001638"}}}


id: PBO:0113744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSRC1 pseudogene 1","termid":"PBO:0113744"}


id: PBO:0089646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GEF Ste6","termid":"PBO:0089646"}


id: GO:0047979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexose + O2 = aldono-1,5-lactone + H202.","definition_xrefs":["EC:1.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hexose oxidase activity","synonyms":[{"name":"D-hexose:oxygen 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047979"}


id: SO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_ribosylguanosine_phosphate is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_ribosylguanosine_phosphate","secondary_identifiers":["RNAMOD:036"],"synonyms":[{"name":"2'-O-ribosylguanosine (phosphate)","type":"exact"},{"name":"Gr(p)","type":"exact"},{"name":"two prime O ribosylguanosine phosphate","type":"exact"}],"termid":"SO:0001331"}


id: SO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 4 nitrogen.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4_methylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf","http://www.insdc.org/files/feature_table.html#7.4.2"],"synonyms":[{"name":"4-mC","type":"exact"},{"name":"4-methylcytosine","type":"exact"},{"name":"N4 methylcytosine","type":"exact"},{"name":"N4-methylcytosine","type":"exact"},{"name":"N4_methylcytosine","type":"exact"},{"name":"m-4C","type":"exact"},{"name":"m4c","type":"exact"}],"termid":"SO:0001919"}


id: PBO:0113095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol kinase; localized to the endoplasmic reticulum (ER); overproduction induces enlargement of ER-like membrane structures, stimulates the mevalonate/ergosterol pathway and suppresses a temperature-sensitive sly1 mutation; contains a CTP transferase domain","termid":"PBO:0113095"}


id: SO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_cis_hydroxyisopentenyl_adenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_cis_hydroxyisopentenyl_adenosine","secondary_identifiers":["RNAMOD:009"],"synonyms":[{"name":"2-methylthio-N6-(cis-hydroxyisopentenyl) adenosine","type":"exact"},{"name":"ms2io6A","type":"exact"},{"name":"two methylthio N6 cis hydroxyisopentenyl adenosine","type":"exact"}],"termid":"SO:0001303"}


id: MONDO:0019121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human pneumocystosis is caused by an infectious agent, which (after recent nomenclature and taxonomy revisions) is now classed as the fungus Pneumocystis jiroveci. The prevalence is unknown. Pneumocystis jiroveci is an opportunistic infectious agent, developing in immunosuppressed patients. It is an air-borne infection, localized to the lungs. However, extrapulmonary involvement is seen in AIDS patients. The disease manifests progressively with coughing, respiratory problems (dyspnea) and fever, followed by acute respiratory insufficiency and death within a few weeks in untreated cases. The most reliable diagnostic method is bronchoalveolar lavage. The treatment of choice is cotrimoxazole.","direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"},{"relation_name":"is_a","term_name":"Pneumocystis infectious disease","termid":"MONDO:0005923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumocystosis","secondary_identifiers":["Orphanet:723","NORD:1923","DOID:11339","SCTID:415125002","EFO:0007448","ICD10CM:B59","ICD10EXP:B59+","ICD10EXP:J17.3*","ICD9:136.3","MEDGEN:777048","MESH:D011020","NCIT:C3334","icd11.foundation:404370038","GARD:4386","UMLS:C1535939"],"synonyms":[{"name":"PCP","type":"exact"},{"name":"PJP","type":"exact"},{"name":"Pneumocystis","type":"exact"},{"name":"Pneumocystis Pneumonia","type":"exact"},{"name":"Pneumocystis carinii pneumonia","type":"exact"},{"name":"Pneumocystis jirovecii pneumonia","type":"exact"},{"name":"Pneumocystis pneumonia","type":"exact"},{"name":"pneumocystosis","type":"exact"},{"name":"pneumocystosis pneumonia","type":"exact"},{"name":"pulmonary pneumocystosis","type":"exact"}],"termid":"MONDO:0019121","xrefs":{"Monarch":{"xref_id":"0019121"}}}


id: PBO:0079671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 1","termid":"PBO:0079671"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: MONDO:0011937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peeling skin syndrome in which the cause of the disease is a mutation in the CSTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exfoliative ichthyosis","termid":"MONDO:0017339"},{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome 4","secondary_identifiers":["DOID:0070523","GARD:18426","OMIM:607936","MEDGEN:895692","UMLS:C4225407","MESH:C564309"],"synonyms":[{"name":"CSTA peeling skin syndrome","type":"exact"},{"name":"PSS4","type":"related"},{"name":"ichthyosis bullosa of Siemens-like","type":"related"},{"name":"ichthyosis, exfoliative, autosomal recessive","type":"related"},{"name":"peeling skin syndrome 4","type":"exact"},{"name":"peeling skin syndrome caused by mutation in CSTA","type":"exact"},{"name":"peeling skin syndrome type 4","type":"exact"}],"termid":"MONDO:0011937","xrefs":{"Monarch":{"xref_id":"0011937"}}}


id: PBO:0003660
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex regulatory subunit Naa25","termid":"PBO:0003660"}


id: MONDO:1010196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital myopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myopathy, non-human animal","secondary_identifiers":["OMIA:000694"],"termid":"MONDO:1010196","xrefs":{"Monarch":{"xref_id":"1010196"}}}


id: GO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a macrophage cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:dph","GOC:rl","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage cytokine production","termid":"GO:0010934"}


id: PBO:0040771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 6","termid":"PBO:0040771"}


id: PBO:0059787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 13","termid":"PBO:0059787"}


id: MONDO:0003786
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma that arises from the testis during childhood.","definition_xrefs":["NCIT:C6544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of testis","termid":"MONDO:0003508"},{"relation_name":"is_a","term_name":"childhood testicular germ cell tumor","termid":"MONDO:0003758"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood testicular choriocarcinoma","secondary_identifiers":["MEDGEN:272469","UMLS:C1333006","DOID:6160"],"synonyms":[{"name":"childhood choriocarcinoma of testis","type":"exact"},{"name":"childhood choriocarcinoma of the testis","type":"exact"},{"name":"childhood testicular choriocarcinoma","type":"exact"},{"name":"choriocarcinoma of testis of childhood","type":"exact"},{"name":"paediatric choriocarcinoma of testis","type":"exact"},{"name":"paediatric choriocarcinoma of the testis","type":"exact"},{"name":"paediatric testicular choriocarcinoma","type":"exact"},{"name":"pediatric choriocarcinoma of testis","type":"exact"},{"name":"pediatric choriocarcinoma of the testis","type":"exact"},{"name":"pediatric testicular choriocarcinoma","type":"exact"}],"termid":"MONDO:0003786","xrefs":{"Monarch":{"xref_id":"0003786"}}}


id: GO:2001198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell differentiation","termid":"GO:2001198"}


id: PBO:0067930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 232","termid":"PBO:0067930"}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: GO:0098985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse with a postsynaptic density, that uses glutamate as a neurotransmitter and whose activity results in excitatory postsynaptic potentials.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric synapse","termid":"GO:0032279"},{"relation_name":"is_a","term_name":"excitatory synapse","termid":"GO:0060076"},{"relation_name":"is_a","term_name":"glutamatergic synapse","termid":"GO:0098978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}


id: GO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of guanosine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"},{"relation_name":"is_a","term_name":"tRNA guanine ribose methylation","termid":"GO:0002938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"wobble position guanine ribose methylation","termid":"GO:0002129"}


id: MONDO:0018313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveal melanoma (obsolete MONDO:0018313)","termid":"MONDO:0018313","xrefs":{"Monarch":{"xref_id":"0018313"}}}


id: GO:0052709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine anabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine formation","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine synthesis","type":"exact"},{"name":"hercynine anabolism","type":"exact"},{"name":"hercynine biosynthesis","type":"exact"},{"name":"hercynine biosynthetic process","type":"exact"},{"name":"hercynine formation","type":"exact"},{"name":"hercynine synthesis","type":"exact"},{"name":"histidine betaine anabolism","type":"exact"},{"name":"histidine betaine biosynthesis","type":"exact"},{"name":"histidine betaine biosynthetic process","type":"exact"},{"name":"histidine betaine formation","type":"exact"},{"name":"histidine betaine synthesis","type":"exact"}],"termid":"GO:0052709"}


id: GO:0032045
data:
  {"annotated_genes":["SJAG_01659","SJAG_01367","SJAG_00688","SJAG_03089","SJAG_03928","SJAG_06588","SJAG_00143","SJAG_01032"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74280],"is_not":false,"summary":null,"term":"GO:0032045"},{"annotations":[91339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035658"},{"annotations":[93234,94391,105454,108162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071986"},{"annotations":[77599,76132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that stimulates the exchange of guanyl nucleotides associated with a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00688":null,"SJAG_01032":null,"SJAG_01367":null,"SJAG_01659":null,"SJAG_03089":null,"SJAG_03928":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"guanine nucleotide exchange factor","type":"related"}],"termid":"GO:0032045","terms_by_termid":{"GO:0032045":null,"GO:0034066":null,"GO:0035658":null,"GO:0071986":null}}


id: PBO:0080405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 pseudogene 1","termid":"PBO:0080405"}


id: PR:O14204
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtf2 gene.","definition_xrefs":["UniProtKB:O14204","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5D6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.12","synonyms":[{"name":"Spom972h-mtf2","type":"exact"}],"termid":"PR:O14204"}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: GO:0043041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation","termid":"GO:0043038"},{"relation_name":"part_of","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"amino acid activation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"nonribosomal amino acid activation","type":"related"}],"termid":"GO:0043041"}


id: PBO:0057803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3125","termid":"PBO:0057803"}


id: PBO:0049764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 1","termid":"PBO:0049764"}


id: PR:000036301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"},{"relation_name":"is_a","term_name":"fungal-type cyclin-dependent kinase 1","termid":"PR:000037486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:000036301"}


id: FYPO:0004370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of cadmium ions into the vacuole occurs to a lower extent than normal.","definition_xrefs":["GO:0036249","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased cadmium ion import into vacuole","synonyms":[{"name":"decreased cadmium import into vacuole","type":"exact"},{"name":"decreased cadmium ion import into vacuole during mitotic cell cycle","type":"related"},{"name":"decreased cadmium ion import into vacuole during vegetative growth","type":"exact"},{"name":"reduced cadmium ion import into vacuole","type":"exact"}],"termid":"FYPO:0004370"}


id: PBO:0075154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 10","termid":"PBO:0075154"}


id: PBO:0040770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 5","termid":"PBO:0040770"}


id: GO:1902483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pyroptotic cell death process that occurs in a cytotoxic T cell.","definition_xrefs":["PMID:32299851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyroptotic cell death","termid":"GO:0141201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell pyroptotic cell death","synonyms":[{"name":"cytotoxic T cell apoptosis","type":"related"},{"name":"cytotoxic T cell apoptotic process","type":"related"},{"name":"cytotoxic T cell pyroptotic process","type":"broad"},{"name":"cytotoxic T lymphocyte apoptotic process","type":"related"},{"name":"cytotoxic T-cell apoptosis","type":"related"},{"name":"cytotoxic T-cell programmed cell death","type":"related"}],"termid":"GO:1902483"}


id: PBO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type (zinc knuckle)","termid":"PBO:0000623"}


id: GO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a smoothened (smo) protein, which interacts with patched to transmit hedgehog signals.","definition_xrefs":["GOC:ceb","PMID:11731473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"smoothened binding","synonyms":[{"name":"smo binding","type":"exact"},{"name":"smo ligand","type":"narrow"},{"name":"smoothened ligand","type":"narrow"}],"termid":"GO:0005119"}


id: PBO:0041792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 5","termid":"PBO:0041792"}


id: PBO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.23","termid":"PBO:0001671"}


id: PBO:0053641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 689","termid":"PBO:0053641"}


id: GO:0070281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, a form of vitamin B6.","definition_xrefs":["GOC:mah","CHEBI:16410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyridoxamine binding","termid":"GO:0070281"}


id: PBO:0039730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C1 pseudogene 1","termid":"PBO:0039730"}


id: PBO:0011420
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0011420"}


id: PBO:0072737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A2","termid":"PBO:0072737"}


id: GO:1903179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine biosynthetic process","synonyms":[{"name":"regulation of dopamine anabolism","type":"exact"},{"name":"regulation of dopamine biosynthesis","type":"exact"},{"name":"regulation of dopamine formation","type":"exact"},{"name":"regulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903179"}


id: PBO:0038598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase very long chain","termid":"PBO:0038598"}


id: GO:0033470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gibberellin 12, (1R,2S,3S,4R,8S,9S,12R)-4,8-dimethyl-13-methylidenetetracyclo[10.2.1.01,9.03,8]pentadecane-2,4-dicarboxylic acid 1meta,4a-dimethyl-8-methylidene-4aalpha,4bbeta-gibbane-1alpha,10beta-dicarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"},{"relation_name":"is_a","term_name":"gibberellin 12 metabolic process","termid":"GO:0033469"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"gibberellin 12 biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5034"],"synonyms":[{"name":"GA12 biosynthetic process","type":"exact"},{"name":"gibberellin 12 anabolism","type":"exact"},{"name":"gibberellin 12 biosynthesis","type":"exact"},{"name":"gibberellin 12 formation","type":"exact"},{"name":"gibberellin 12 synthesis","type":"exact"},{"name":"gibberellin A12 biosynthetic process","type":"exact"}],"termid":"GO:0033470"}


id: GO:0051712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"positively_regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of killing of cells of another organism","secondary_identifiers":["GO:0052388","GO:0052501","GO:0052518","GO:0052529","GO:0052330"],"synonyms":[{"name":"activation by organism of apoptotic programmed cell death in other organism during symbiotic interaction","type":"related"},{"name":"activation of killing of cells of another organism","type":"narrow"},{"name":"enhancement of other organism programmed cell death by organism","type":"related"},{"name":"positive regulation of killing of cells of other organism","type":"exact"},{"name":"stimulation of killing of cells of another organism","type":"narrow"},{"name":"up regulation of killing of cells of another organism","type":"exact"},{"name":"up-regulation of killing of cells of another organism","type":"exact"},{"name":"upregulation of killing of cells of another organism","type":"exact"}],"termid":"GO:0051712"}


id: PBO:0066750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 48","termid":"PBO:0066750"}


id: PBO:0076357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 4","termid":"PBO:0076357"}


id: PBO:0042492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 13","termid":"PBO:0042492"}


id: GO:2000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xyloglucan catabolic process","synonyms":[{"name":"regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000951"}


id: PBO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain Dil1","termid":"PBO:0002660"}


id: MONDO:0005349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of spongy bone in the labyrinth capsule which can progress toward the stapes (stapedial fixation) or anteriorly toward the cochlea leading to conductive, sensorineural, or mixed hearing loss. Several genes are associated with familial otosclerosis with varied clinical signs.","definition_xrefs":["MESH:D010040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis","secondary_identifiers":["ICD9:387.9","icd11.foundation:1242649410","ICD9:387","DOID:12185","ICD9:387.8","HP:0000362","Orphanet:2794","UMLS:C0029899","NCIT:C185242","MEDGEN:10508","SCTID:11543004","OMIMPS:166800","EFO:0004213"],"synonyms":[{"name":"otosclerosis","type":"exact"},{"name":"otosclerosis (disease)","type":"exact"}],"termid":"MONDO:0005349","xrefs":{"Monarch":{"xref_id":"0005349"}}}


id: PBO:0054330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1723","termid":"PBO:0054330"}


id: PR:O14334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02984","PRO:DNx","PANTHER:PTHR20903:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.01","secondary_identifiers":["UniProtKB:O14334"],"synonyms":[{"name":"Spom972h-PFDN1","type":"exact"}],"termid":"PR:O14334"}


id: PBO:0077997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 1","termid":"PBO:0077997"}


id: PBO:0032707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_error-prone_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032707"}


id: MONDO:0006230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma of the stomach resembling squamous cell carcinomas arising elsewhere in the body.","definition_xrefs":["NCIT:C5475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric squamous cell carcinoma","secondary_identifiers":["GARD:21743","SCTID:766980008","DOID:5516","Orphanet:418959","UMLS:C1333789","EFO:1000278","MEDGEN:234302"],"synonyms":[{"name":"gastric (stomach) squamous cell cancer","type":"exact"},{"name":"gastric squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of stomach","type":"exact"},{"name":"squamous cell carcinoma of the stomach","type":"exact"},{"name":"stomach squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006230","xrefs":{"Monarch":{"xref_id":"0006230"}}}


id: GO:0099164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization of a symmetric synapse. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization membrane of symmetric synapse","termid":"GO:0099164"}


id: PBO:0081921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 890, pseudogene","termid":"PBO:0081921"}


id: GO:0002763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte differentiation","synonyms":[{"name":"activation of myeloid leukocyte differentiation","type":"narrow"},{"name":"stimulation of myeloid leukocyte differentiation","type":"narrow"},{"name":"up regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"up-regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"upregulation of myeloid leukocyte differentiation","type":"exact"}],"termid":"GO:0002763"}


id: MONDO:0009590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"},{"relation_name":"is_a","term_name":"PSAP-related sphingolipidosis","termid":"MONDO:0100517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005559","MONDO:0005066","MONDO:0002561","MONDO:0005244","MONDO:0002039"],"is_obsolete":false,"name":"metachromatic leukodystrophy due to saposin B deficiency","secondary_identifiers":["NANDO:1200082","SCTID:68390005","UMLS:C0268262","SCTID:1003375005","MESH:C562609","NANDO:2201205","GARD:10674","OMIM:249900","SCTID:297278001","MEDGEN:120624"],"synonyms":[{"name":"metachromatic leukodystrophy due to cerebroside sulfatase activator deficiency","type":"related"},{"name":"metachromatic leukodystrophy due to sap-B deficiency","type":"exact"},{"name":"metachromatic leukodystrophy due to saposin b deficiency","type":"exact"},{"name":"saposin B deficiency","type":"related"}],"termid":"MONDO:0009590","xrefs":{"Monarch":{"xref_id":"0009590"}}}


id: PBO:0049499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 6","termid":"PBO:0049499"}


id: PBO:0017506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms2 (predicted)","termid":"PBO:0017506"}


id: MONDO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"retinal vein occlusion","termid":"MONDO:0006951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"occlusion of tributary of retinal vein","secondary_identifiers":["DOID:13514","ICD9:362.36"],"synonyms":[{"name":"venous tributary (branch) occlusion of retina","type":"exact"},{"name":"venous tributary branch occlusion of retina","type":"exact"},{"name":"venous tributary occlusion of retina","type":"exact"}],"termid":"MONDO:0001733","xrefs":{"Monarch":{"xref_id":"0001733"}}}


id: SO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding threonyl tRNA (SO:000270).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine_tRNA_primary_transcript","synonyms":[{"name":"threonine tRNA primary transcript","type":"exact"}],"termid":"SO:0000227"}


id: MONDO:0010674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease leading to a massive accumulation of glycosaminoglycans and a wide variety of symptoms including distinctive coarse facial features, short stature, cardio-respiratory involvement and skeletal abnormalities. It manifests as a continuum varying from a severe to an attenuated form without neuronal involvement.","definition_xrefs":["Orphanet:580"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic neurometabolic disease with X-linked intellectual disability (obsolete MONDO:0015920)","termid":"MONDO:0015920"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal disease with hypertrophic cardiomyopathy (obsolete MONDO:0016326)","termid":"MONDO:0016326"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with skin involvement (obsolete MONDO:0019301)","termid":"MONDO:0019301"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal storage disease with skeletal involvement (obsolete MONDO:0019706)","termid":"MONDO:0019706"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 2","secondary_identifiers":["ICD10CM:E76.1","OMIM:309900","NANDO:1200097","DOID:12799","GARD:6675","icd11.foundation:1056274204","MEDGEN:7734","NCIT:C61260","NORD:1255","UMLS:C0026705","NANDO:2200548","MESH:D016532","Orphanet:79388","SCTID:70737009","MedDRA:10056889"],"synonyms":[{"name":"Hunter syndrome","type":"exact"},{"name":"Hunter's syndrome","type":"exact"},{"name":"I2S deficiency","type":"exact"},{"name":"IDS deficiency","type":"exact"},{"name":"MPS 2","type":"exact"},{"name":"MPS II","type":"exact"},{"name":"MPS II - Hunter syndrome","type":"exact"},{"name":"MPS with skin involvement","type":"exact"},{"name":"MPS2","type":"exact"},{"name":"MPSII","type":"exact"},{"name":"Mucopolysaccharidosis Type II","type":"exact"},{"name":"SIDS deficiency","type":"exact"},{"name":"attenuated MPS (subtype; formerly known as mild MPS II)","type":"exact"},{"name":"deficiency of iduronate-2-sulphatase","type":"exact"},{"name":"iduronate 2-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis II","type":"exact"},{"name":"mucopolysaccharidosis II, X-linked recessive","type":"exact"},{"name":"mucopolysaccharidosis type 2","type":"exact"},{"name":"mucopolysaccharidosis type II","type":"exact"},{"name":"mucopolysaccharidosis with skin involvement","type":"exact"},{"name":"mucopolysaccharidosis, MPS-II","type":"exact"},{"name":"mucopolysaccharidosis, type 2","type":"exact"},{"name":"mucopolysaccharidosis, type II","type":"exact"},{"name":"severe MPS II","type":"exact"},{"name":"sulfoiduronate sulfatase deficiency","type":"exact"}],"termid":"MONDO:0010674","xrefs":{"Monarch":{"xref_id":"0010674"}}}


id: PBO:0066224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 27","termid":"PBO:0066224"}


id: GO:0033048
data:
  {"annotated_genes":["SJAG_02336","SJAG_01837","SJAG_01330","SJAG_04999","SJAG_00460","SJAG_02451","SJAG_03126","SJAG_02169","SJAG_04884","SJAG_04699","SJAG_01082","SJAG_04126","SJAG_04259","SJAG_03353","SJAG_01297","SJAG_01679","SJAG_03681","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112269,114087,99914,91061,104211,107548,116202,108568,114574],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[106639,110216,99758,114803,102117,115858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[103596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[94536],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116975],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sister chromatid segregation","termid":"GO:0033046"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"negatively_regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033048","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: MONDO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast ductal carcinoma (obsolete MONDO:0002484)","termid":"MONDO:0002484","xrefs":{"Monarch":{"xref_id":"0002484"}}}


id: GO:0045939
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"negatively_regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of steroid metabolic process","type":"exact"},{"name":"down-regulation of steroid metabolic process","type":"exact"},{"name":"downregulation of steroid metabolic process","type":"exact"},{"name":"inhibition of steroid metabolic process","type":"narrow"},{"name":"negative regulation of steroid metabolism","type":"exact"}],"termid":"GO:0045939","terms_by_termid":{"GO:0010895":null}}


id: PBO:0043191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2","termid":"PBO:0043191"}


id: GO:0102762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + S-adenosyl-L-methionine = H+ + hesperetin(1-) + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","MetaCyc:RXN-7754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"eriodictyol 4'-O-methyltransferase activity","termid":"GO:0102762"}


id: PBO:0117014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCTD14 antisense RNA 2","termid":"PBO:0117014"}


id: MONDO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by Trichomonas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichomoniasis","secondary_identifiers":["DOID:1947","MEDGEN:52838","ICD9:131.9","NCIT:C35720","UMLS:C0040921","icd11.foundation:1220564554","SCTID:56335008","ICD9:131.8","ICD9:131","MESH:D014245","ICD10CM:A59"],"synonyms":[{"name":"Trichomonas infection","type":"exact"},{"name":"infections, Trichomonas","type":"related"}],"termid":"MONDO:0002154","xrefs":{"Monarch":{"xref_id":"0002154"}}}


id: PBO:0024816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of","termid":"PBO:0024816"}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["GOC:ems","ISBN:0070524300","ISBN:0140512888"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: GO:0006923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of cytoskeletal proteins that contributes to apoptosis, leading to the collapse of cytoskeletal structures.","definition_xrefs":["GOC:dph","GOC:mah","ISBN:0815332181","GOC:mtg_apoptosis","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of cytoskeletal proteins involved in execution phase of apoptosis (obsolete GO:0006923)","synonyms":[{"name":"apoptotic cleavage of cytoskeletal proteins","type":"exact"},{"name":"cleavage of cytoskeletal proteins involved in apoptosis","type":"broad"},{"name":"cleavage of cytoskeletal proteins involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0006923"}


id: PBO:0017802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoate-protein ligase Lip2","termid":"PBO:0017802"}


id: PBO:0058275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4652","termid":"PBO:0058275"}


id: PBO:0055483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2916","termid":"PBO:0055483"}


id: PBO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 34","termid":"PBO:0071568"}


id: PBO:0091456
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3125118_3125119insT","termid":"PBO:0091456"}


id: PBO:0069668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 945, pseudogene","termid":"PBO:0069668"}


id: PBO:0028117
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028117"}


id: PBO:0003422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit Cut3","termid":"PBO:0003422"}


id: GO:0000813
data:
  {"annotated_genes":["SJAG_04349","SJAG_01981"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72674,88461],"is_not":false,"summary":null,"term":"GO:0000813"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport. It consists of the class E vacuolar protein sorting (Vps) proteins and interacts with ubiquitinated cargoes.","definition_xrefs":["PMID:12892785","GOC:rb","PMID:12900393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01981":null,"SJAG_04349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"ESCRT I complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000813","terms_by_termid":{"GO:0000813":null}}


id: GO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ionotropic glutamate receptor activity that exhibits fast gating by glutamate and acts by opening a cation channel permeable to sodium, potassium, and, in the absence of a GluR2 subunit, calcium.","definition_xrefs":["GOC:mah","PMID:10049997","PMID:8804111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0038023","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"AMPA glutamate receptor activity","synonyms":[{"name":"AMPA receptor activity","type":"exact"},{"name":"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity","type":"exact"}],"termid":"GO:0004971"}


id: GO:0050677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of urothelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urothelial cell proliferation","termid":"GO:0050675"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"urothelial cell proliferation","termid":"GO:0050674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urothelial cell proliferation","synonyms":[{"name":"activation of urothelial cell proliferation","type":"narrow"},{"name":"stimulation of urothelial cell proliferation","type":"narrow"},{"name":"up regulation of urothelial cell proliferation","type":"exact"},{"name":"up-regulation of urothelial cell proliferation","type":"exact"},{"name":"upregulation of urothelial cell proliferation","type":"exact"}],"termid":"GO:0050677"}


id: PR:Q9US55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neutral alpha-glucosidase AB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00737","PANTHER:PTHR22762:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase 2 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.03c","secondary_identifiers":["UniProtKB:Q9US55"],"synonyms":[{"name":"Spom972h-GANAB","type":"exact"},{"name":"alpha-glucosidase II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glucosidase II gls2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glucosidase II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US55"}


id: PBO:0089724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Cdc42/Rho3/Rho4 (Gef3)","termid":"PBO:0089724"}


id: PBO:0082558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide-activated, type 2A-related serine-threonine phosphatase; functions in G1/S transition of mitotic cycle; controls lifespan, mitochondrial function, cell cycle progression by regulating HXK2 phosphorylation; regulator of COPII coat dephosphorylation; required for ER to Golgi traffic; interacts with Hrr25p kinase; cytoplasmic and nuclear protein that modulates functions mediated by Pkc1p including cell wall and actin cytoskeleton organization; similar to human PP6","termid":"PBO:0082558"}


id: GO:0016040
data:
  {"annotated_genes":["SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72586],"is_not":false,"summary":null,"term":"GO:0016040"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + NAD+ = 2-oxoglutarate + L-glutamine + H+ + NADH.","definition_xrefs":["EC:1.4.1.14","RHEA:13753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase (NADH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUTAMATE-SYNTHASE-NADH-RXN","KEGG_REACTION:R00093"],"synonyms":[{"name":"GOGAT activity","type":"broad"},{"name":"L-glutamate synthase (NADH)","type":"related"},{"name":"L-glutamate synthase activity","type":"broad"},{"name":"L-glutamate synthetase activity","type":"broad"},{"name":"L-glutamate:NAD+ oxidoreductase (transaminating)","type":"related"},{"name":"NADH-dependent glutamate synthase activity","type":"related"},{"name":"NADH-glutamate synthase activity","type":"related"},{"name":"NADH: GOGAT","type":"related"},{"name":"glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"related"}],"termid":"GO:0016040","terms_by_termid":{"GO:0016040":null}}


id: GO:0106231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:H2O + N(6)-propanoyl-L-lysyl-[protein] + NAD+ = 3''-O-propanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["GOC:sp","PMID:30026585","RHEA:23500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"NAD-dependent protein-lysine depropionylase activity","termid":"GO:0106231"}


id: GO:0044422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete organelle part (obsolete GO:0044422)","termid":"GO:0044422"}


id: PBO:0066190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 12","termid":"PBO:0066190"}


id: GO:0003008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"system process","synonyms":[{"name":"organ system process","type":"exact"}],"termid":"GO:0003008"}


id: PBO:0111536
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive amino acid Gene","termid":"PBO:0111536"}


id: MONDO:0016280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a uterine cervix.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcoma of cervix uteri","secondary_identifiers":["Orphanet:213797","GARD:20493","ICD10CM:C53.0","UMLS:C5679807","MEDGEN:1842604"],"synonyms":[{"name":"cervical malignant mesenchymal tumor","type":"exact"},{"name":"cervical malignant mesenchymal tumour","type":"exact"},{"name":"cervical sarcoma","type":"exact"},{"name":"malignant mesenchymal tumor of cervix uteri","type":"exact"},{"name":"malignant mesenchymal tumour of cervix uteri","type":"exact"},{"name":"sarcoma of uterine cervix","type":"exact"},{"name":"uterine cervix sarcoma","type":"exact"}],"termid":"MONDO:0016280","xrefs":{"Monarch":{"xref_id":"0016280"}}}


id: PBO:0054694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2103","termid":"PBO:0054694"}


id: PBO:0054741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2150","termid":"PBO:0054741"}


id: PR:Q9Y7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.06","synonyms":[{"name":"Spom972h-rps001","type":"exact"}],"termid":"PR:Q9Y7L8"}


id: MONDO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises in the pineal region. Representative examples include germinoma, immature teratoma, choriocarcinoma, embryonal carcinoma and yolk sac tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"},{"relation_name":"is_a","term_name":"pineal gland cancer","termid":"MONDO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant pineal area germ cell neoplasm","secondary_identifiers":["DOID:1660","NCIT:C6767","SCTID:277508009","MEDGEN:233159","ICD9:239.7","UMLS:C1334612"],"synonyms":[{"name":"malignant germ cell neoplasm of pineal gland","type":"exact"},{"name":"malignant germ cell neoplasm of pineal parenchyma","type":"exact"},{"name":"malignant germ cell neoplasm of the pineal gland","type":"exact"},{"name":"malignant germ cell neoplasm of the pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumor of pineal gland","type":"exact"},{"name":"malignant germ cell tumor of pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumor of the pineal gland","type":"exact"},{"name":"malignant germ cell tumor of the pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumour of pineal gland","type":"exact"},{"name":"malignant germ cell tumour of pineal parenchyma","type":"exact"},{"name":"malignant germ cell tumour of the pineal gland","type":"exact"},{"name":"malignant germ cell tumour of the pineal parenchyma","type":"exact"},{"name":"malignant pineal area germ cell tumor","type":"exact"},{"name":"malignant pineal area germ cell tumour","type":"exact"},{"name":"malignant pineal gland germ cell neoplasm","type":"exact"},{"name":"malignant pineal gland germ cell tumor","type":"exact"},{"name":"malignant pineal gland germ cell tumour","type":"exact"},{"name":"malignant pineal parenchymal germ cell neoplasm","type":"exact"},{"name":"malignant pineal parenchymal germ cell tumor","type":"exact"},{"name":"malignant pineal parenchymal germ cell tumour","type":"exact"},{"name":"malignant pineal region germ cell neoplasm","type":"exact"},{"name":"malignant pineal region germ cell tumor","type":"exact"},{"name":"malignant pineal region germ cell tumour","type":"exact"},{"name":"pineal cell tumor","type":"related"},{"name":"pineal cell tumour","type":"related"},{"name":"pineal germ cell neoplasm, malignant","type":"exact"},{"name":"pineal germ cell tumor","type":"exact"},{"name":"pineal germ cell tumour","type":"exact"},{"name":"pineal region germ cell tumor","type":"exact"},{"name":"pineal region germ cell tumour","type":"exact"},{"name":"pineal region germinoma","type":"related"}],"termid":"MONDO:0002073","xrefs":{"Monarch":{"xref_id":"0002073"}}}


id: PBO:0076761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan 2,3-dioxygenase","termid":"PBO:0076761"}


id: MONDO:0001005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by inhalation of kaolin dust.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed mineral dust pneumoconiosis","termid":"MONDO:0001000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kaolin pneumoconiosis","secondary_identifiers":["DOID:10331","ICD9:502","NCIT:C35315","SCTID:36696005","UMLS:C0264435","MEDGEN:78108","GARD:8355"],"synonyms":[{"name":"Kaolinosis","type":"exact"},{"name":"simple kaolinosis","type":"related"}],"termid":"MONDO:0001005","xrefs":{"Monarch":{"xref_id":"0001005"}}}


id: GO:0046038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GMP catabolic process","synonyms":[{"name":"GMP breakdown","type":"exact"},{"name":"GMP catabolism","type":"exact"},{"name":"GMP degradation","type":"exact"}],"termid":"GO:0046038"}


id: CHEBI:17552
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP","termid":"CHEBI:17552"}


id: GO:0046069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"cyclic nucleotide catabolic process","termid":"GO:0009214"},{"relation_name":"is_a","term_name":"cGMP metabolic process","termid":"GO:0046068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cGMP catabolic process","synonyms":[{"name":"cGMP breakdown","type":"exact"},{"name":"cGMP catabolism","type":"exact"},{"name":"cGMP degradation","type":"exact"}],"termid":"GO:0046069"}


id: PBO:0031800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_at_mitotic_G2/M_phase_transition","termid":"PBO:0031800"}


id: GO:0004418
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76565],"is_not":false,"summary":null,"term":"GO:0004418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4.","definition_xrefs":["EC:2.5.1.61","RHEA:13185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"hydroxymethylbilane synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-189406","KEGG_REACTION:R00084","MetaCyc:OHMETHYLBILANESYN-RXN"],"synonyms":[{"name":"(4-(2-carboxyethyl)-3-(carboxymethyl)pyrrol-2-yl)methyltransferase (hydrolyzing) activity","type":"related"},{"name":"(4-[2-carboxyethyl]-3-[carboxymethyl]pyrrol-2-yl)methyltransferase (hydrolysing)","type":"related"},{"name":"HMB-synthase activity","type":"related"},{"name":"porphobilinogen ammonia-lyase (polymerizing)","type":"related"},{"name":"porphobilinogen deaminase activity","type":"related"},{"name":"porphobilinogen:(4-[2-carboxyethyl]-3-[carboxymethyl]pyrrol-2-yl)methyltransferase (hydrolysing)","type":"related"},{"name":"pre-uroporphyrinogen synthase activity","type":"related"},{"name":"uroporphyrinogen I synthase activity","type":"narrow"},{"name":"uroporphyrinogen I synthetase activity","type":"narrow"},{"name":"uroporphyrinogen synthase activity","type":"related"},{"name":"uroporphyrinogen synthetase activity","type":"related"}],"termid":"GO:0004418","terms_by_termid":{"GO:0004418":null}}


id: GO:0006817
data:
  {"annotated_genes":["SJAG_04990","SJAG_00233","SJAG_01059","SJAG_00547","SJAG_04241","SJAG_01033"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[116092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[116806,110009,113036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[99720],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phosphate ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate transport","type":"related"}],"termid":"GO:0006817","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: MONDO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM3 synthase deficiency is characterized by recurrent seizures (epilepsy) and problems with brain development. Within the first few weeks after birth, affected infants become irritable and develop feeding difficulties and vomiting that prevent them from growing and gaining weight at the usual rate. Seizures begin within the first year of life and worsen over time. Multiple types of seizures are possible, including generalized tonic-clonic seizures (also known as grand mal seizures), which cause muscle rigidity, convulsions, and loss of consciousness. Some affected children also experience prolonged episodes of seizure activity called nonconvulsive status epilepticus. The seizures associated with GM3 synthase deficiency tend to be resistant (refractory) to treatment with antiseizure medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002525","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"GM3 synthase deficiency","secondary_identifiers":["SCTID:722762005","UMLS:C1836824","MEDGEN:323005","Orphanet:370933","Orphanet:370938","OMIM:609056","DOID:0060470","GARD:12059","Orphanet:171714"],"synonyms":[{"name":"Amish infantile epilepsy syndrome","type":"exact"},{"name":"GM3 synthase deficiency","type":"exact"},{"name":"SPDRS","type":"exact"},{"name":"ST3GAL5-CDG","type":"exact"},{"name":"disorder of lactosylceramide alpha-2,3-sialyltransferase activity","type":"exact"},{"name":"epilepsy syndrome, infantile-onset symptomatic","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome - developmental stagnation - blindness","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome-developmental stagnation-blindness syndrome","type":"exact"},{"name":"lactosylceramide alpha-2,3-sialyltransferase activity disease","type":"exact"},{"name":"salt & pepper syndrome","type":"exact"},{"name":"salt and pepper developmental regression syndrome","type":"exact"},{"name":"salt and pepper mental retardation syndrome","type":"related"},{"name":"salt-and-pepper syndrome","type":"exact"}],"termid":"MONDO:0018274","xrefs":{"Monarch":{"xref_id":"0018274"}}}


id: PBO:0041857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4","termid":"PBO:0041857"}


id: GO:1903385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of homophilic cell adhesion","termid":"GO:1903385"}


id: MONDO:0011916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive Charcot-Marie-Tooth disease with hoarseness (ARCMT2K or CMT4C4) is a severe early-onset form of axonal CMT peripheral sensorimotor polyneuropathy.","definition_xrefs":["Orphanet:101097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2K","secondary_identifiers":["GARD:12448","MEDGEN:375064","UMLS:C1842983","OMIM:607831","DOID:0110167","SCTID:725047007"],"synonyms":[{"name":"ARCMT2K","type":"exact"},{"name":"CMT2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2K","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2K","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2K","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2K","type":"related"},{"name":"autosomal recessive Charcot-Marie-Tooth disease with hoarseness","type":"exact"},{"name":"autosomal recessive axonal CMT4C4","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease disease type 2K","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2K","type":"exact"}],"termid":"MONDO:0011916","xrefs":{"Monarch":{"xref_id":"0011916"}}}


id: GO:0098039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process of transposition in which the existing element is replicated and one of the copies is excised and integrated at a new target site. Also referred to as copy-and-paste transposition.","definition_xrefs":["PMID:10540284","GOC:bm","PMID:1660177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"replicative DNA transposition","synonyms":[{"name":"copy-and-paste transposition","type":"exact"},{"name":"replicative transposition, DNA-mediated","type":"exact"},{"name":"transpositional DNA genome replication","type":"exact"}],"termid":"GO:0098039"}


id: PBO:0067678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 863, pseudogene","termid":"PBO:0067678"}


id: GO:0042162
data:
  {"annotated_genes":["SJAG_03092","SJAG_01677","SJAG_01720","SJAG_02362","SJAG_02194","SJAG_04245","SJAG_05372","SJAG_04372","SJAG_01378","SJAG_05979","SJAG_02212","SJAG_01698","SJAG_04863","SJAG_05214","SJAG_01777","SJAG_00939","SJAG_00112","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69963,70271,70689,70938,75250,77497,78604,80144],"is_not":false,"summary":null,"term":"GO:0042162"},{"annotations":[74516,80597,90109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003691"},{"annotations":[77244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[110686,80595,63418,111842,96400,80638,108435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to a telomere, a specific structure at the end of a linear chromosome required for the integrity and maintenance of the end.","definition_xrefs":["GOC:jl","SO:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01720":null,"SJAG_01777":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04863":null,"SJAG_05214":null,"SJAG_05372":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"telomeric DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"telomere binding","type":"exact"},{"name":"telomeric repeat binding","type":"exact"}],"termid":"GO:0042162","terms_by_termid":{"GO:0003691":null,"GO:0042162":null,"GO:0043047":null,"GO:0098505":null}}


id: MOD:01759
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-130 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-130 reporter fragment","type":"exact"}],"termid":"MOD:01759"}


id: PBO:0054505
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1905","termid":"PBO:0054505"}


id: PBO:0066166
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 3","termid":"PBO:0066166"}


id: PBO:0075362
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX2 overlapping transcript","termid":"PBO:0075362"}


id: MONDO:0011436
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  {"annotated_genes":["SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85613],"is_not":false,"summary":null,"term":"MONDO:0011436"}]},"cv_name":"mondo","definition":"Spinal muscular atrophy with respiratory distress type 1 is a rare genetic motor neuron disease characterized by severe respiratory distress/respiratory failure in association with diaphragmatic eventration and palsy, as well as progressive, symmetrical, distal-to-proximal muscle weakness and atrophy (in lower limbs especially). Patients typically have a history of intrauterine growth retardation, low birth weight, feeble cry, weak suck and failure to thrive and present with inspiratory stridor, recurrent episodes of dyspnea or apnea, cyanosis and absent deep tendon reflexes. Kyphosis/scoliosis, foot deformities and joint contractures are frequently associated features.","definition_xrefs":["Orphanet:98920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive distal spinal muscular atrophy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536880","OMIM:604320","UMLS:C1858517","GARD:8592","MEDGEN:388083","NORD:1994","SCTID:711483003","ICD9:335.19","DOID:0111064"],"synonyms":[{"name":"DSMA1","type":"exact"},{"name":"HMN 6","type":"related"},{"name":"HMN VI","type":"related"},{"name":"Hmn6","type":"related"},{"name":"IGHMBP2 spinal muscular atrophy","type":"exact"},{"name":"SIANRF","type":"exact"},{"name":"SMARD1","type":"exact"},{"name":"Spinal Muscular Atrophy with Respiratory Distress","type":"exact"},{"name":"autosomal recessive distal spinal muscular atrophy 1","type":"exact"},{"name":"autosomal recessive distal spinal muscular atrophy type 1","type":"exact"},{"name":"autosomal recessive spinal muscular atrophy with respiratory distress","type":"exact"},{"name":"dHMN6","type":"exact"},{"name":"dSMA1","type":"exact"},{"name":"diaphragmatic spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy type 6","type":"exact"},{"name":"distal-HMN type 6","type":"exact"},{"name":"neuronopathy, Severe infantile axonal, with respiratory failure","type":"related"},{"name":"neuronopathy, distal hereditary motor, type 6","type":"related"},{"name":"neuronopathy, distal hereditary motor, type VI","type":"related"},{"name":"severe infantile axonal neuropathy with respiratory failure","type":"related"},{"name":"severe infantile axonal neuropathy with respiratory failure type 1","type":"exact"},{"name":"spinal muscular atrophy caused by mutation in IGHMBP2","type":"exact"},{"name":"spinal muscular atrophy with respiratory distress 1","type":"related"},{"name":"spinal muscular atrophy with respiratory distress type 1","type":"exact"},{"name":"spinal muscular atrophy, diaphragmatic","type":"related"},{"name":"spinal muscular atrophy, distal, autosomal recessive, 1","type":"related"},{"name":"spinal muscular atrophy, distal, autosomal recessive, type 1","type":"exact"}],"termid":"MONDO:0011436","terms_by_termid":{"MONDO:0011436":null},"xrefs":{"Monarch":{"xref_id":"0011436"}}}


id: MONDO:0000952
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the hindlimb long bone.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer affecting bone of limb skeleton","termid":"MONDO:0024311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of long bone of lower limb","secondary_identifiers":["ICD10CM:C40.2","ICD9:170.7","DOID:10149","UMLS:C3265932","MEDGEN:757711","SCTID:449627008"],"synonyms":[{"name":"cancer of hindlimb long bone","type":"exact"},{"name":"hindlimb long bone cancer","type":"exact"},{"name":"long bones of lower limb cancer","type":"related"},{"name":"malignant hindlimb long bone neoplasm","type":"exact"},{"name":"malignant neoplasm of hindlimb long bone","type":"exact"},{"name":"malignant neoplasm of long bones of leg","type":"exact"}],"termid":"MONDO:0000952","xrefs":{"Monarch":{"xref_id":"0000952"}}}


id: GO:0070558
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaM-beta2 integrin complex bound to membrane protein CD63, a member of the tetraspan family.","definition_xrefs":["PMID:8871662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaM-beta2 integrin-CD63 complex","synonyms":[{"name":"ITGAM-ITGB2-CD63 complex","type":"narrow"}],"termid":"GO:0070558"}


id: MONDO:0026170
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic central nervous system malformation (obsolete MONDO:0026170)","secondary_identifiers":["Orphanet:183506"],"termid":"MONDO:0026170","xrefs":{"Monarch":{"xref_id":"0026170"}}}


id: MONDO:0002338
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epilepsy syndrome that is located in an area of the brain other than the temporal lobe.","definition_xrefs":["DOID:2544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"extratemporal epilepsy","secondary_identifiers":["NCIT:C7760","SCTID:111498005","MEDGEN:78737","ICD9:345.80","UMLS:C0270849"],"synonyms":[{"name":"extratemporal epilepsy","type":"exact"}],"termid":"MONDO:0002338","xrefs":{"Monarch":{"xref_id":"0002338"}}}


id: PR:P53692
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19306:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.06","secondary_identifiers":["UniProtKB:P53692"],"synonyms":[{"name":"DNA repair protein rad18 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC5E4.06","type":"related"},{"name":"Spom972h-SMC6","type":"exact"},{"name":"rad18","type":"related"}],"termid":"PR:P53692"}


id: GO:0055096
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of low-density lipoprotein particle.","definition_xrefs":["PMID:16013438","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to low-density lipoprotein particle stimulus","termid":"GO:0071404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle mediated signaling","synonyms":[{"name":"low-density lipoprotein mediated signalling","type":"exact"},{"name":"low-density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"low-density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055096"}


id: PR:O14140
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome complex subunit DSS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16771:SF0","OMA:SCHPO02235","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor dss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.02","secondary_identifiers":["UniProtKB:O14140"],"synonyms":[{"name":"Spom972h-SHFM1","type":"exact"}],"termid":"PR:O14140"}


id: PBO:0050019
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DO beta","termid":"PBO:0050019"}


id: PR:O74304
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- win1 gene.","definition_xrefs":["UniProtKB:O74304","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase win1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.09","synonyms":[{"name":"Spom972h-win1","type":"exact"}],"termid":"PR:O74304"}


id: GO:0001516
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin metabolic process","termid":"GO:0006693"},{"relation_name":"is_a","term_name":"prostanoid biosynthetic process","termid":"GO:0046457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostaglandin biosynthetic process","synonyms":[{"name":"prostaglandin anabolism","type":"exact"},{"name":"prostaglandin biosynthesis","type":"exact"},{"name":"prostaglandin formation","type":"exact"},{"name":"prostaglandin synthesis","type":"exact"}],"termid":"GO:0001516"}


id: RO:0002236
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host root (PO:0009005)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"root_parasite_of","termid":"RO:0002236"}


id: GO:0009444
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the conversion of pyruvate to acetylphosphate.","definition_xrefs":["MetaCyc:PYRUVOX-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate oxidation (obsolete GO:0009444)","secondary_identifiers":["Wikipedia:Pyruvate_decarboxylation"],"termid":"GO:0009444"}


id: FYPO:0002882
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription","synonyms":[{"name":"normal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0002882"}


id: MONDO:0005267
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id: PBO:0001357
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id: PBO:0080524
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id: PBO:0113059
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id: PBO:0048675
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id: PBO:0089462
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id: MONDO:0008791
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id: GO:0000710
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id: PBO:0004050
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id: MONDO:0012586
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id: MOD:01745
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id: PR:O13895
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id: FYPO:0001847
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id: FYPO:0005909
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id: PBO:0059643
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id: GO:0043631
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id: PBO:0075892
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id: GO:0017148
data:
  {"annotated_genes":["SJAG_05000","SJAG_04291","SJAG_02638","SJAG_00423","SJAG_03869","SJAG_00169","SJAG_00690","SJAG_01942","SJAG_02592","SJAG_03501","SJAG_02026","SJAG_00786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118531,95921,99766,115155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[91647,112464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[94703,99660,109982,75587,70307,115918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[75724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[99774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00423":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016478"],"synonyms":[{"name":"down regulation of protein biosynthetic process","type":"exact"},{"name":"down-regulation of protein biosynthetic process","type":"exact"},{"name":"downregulation of protein biosynthetic process","type":"exact"},{"name":"inhibition of protein biosynthetic process","type":"narrow"},{"name":"negative regulation of protein anabolism","type":"exact"},{"name":"negative regulation of protein biosynthesis","type":"exact"},{"name":"negative regulation of protein biosynthetic process","type":"exact"},{"name":"negative regulation of protein formation","type":"exact"},{"name":"negative regulation of protein synthesis","type":"exact"},{"name":"protein biosynthesis inhibitor activity","type":"related"},{"name":"protein biosynthetic process inhibitor activity","type":"related"}],"termid":"GO:0017148","terms_by_termid":{"GO:0141014":null,"GO:1904689":null,"GO:1990625":null,"GO:2000766":null,"GO:2001125":null}}


id: PBO:0072844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAPCD1 antisense RNA 1","termid":"PBO:0072844"}


id: MONDO:0011391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megalencephalic leukoencephalopathy with subcortical cysts (MLC) is a form of leukodystrophy that is characterized by infantile-onset macrocephaly, often with mild neurologic signs at presentation (such as mild motor delay), which worsen with time, leading to poor ambulation, falls, ataxia, spasticity, increasing seizures and cognitive decline. Brain magnetic resonance imaging reveals diffusely abnormal and mildly swollen white matter as well as subcortical cysts in the anterior temporal and frontoparietal regions.","definition_xrefs":["Orphanet:2478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, megalencephalic","termid":"MONDO:0000137"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts","secondary_identifiers":["UMLS:C1858854","DOID:0080315","GARD:3445","NANDO:2200837","SCTID:703536004","NANDO:1200950","MEDGEN:347006","MESH:C536141"],"synonyms":[{"name":"MLC","type":"exact"},{"name":"MLC1","type":"related"},{"name":"Vacuolating megalencephalic leukoencephalopathy with subcortical cysts","type":"exact"},{"name":"Van der Knaap syndrome","type":"exact"},{"name":"megalencephalic leukodystrophy","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts type 1","type":"exact"},{"name":"megalencephaly-cystic leukodystrophy","type":"related"},{"name":"megalencephaly-cystic leukodystrophy syndrome","type":"exact"}],"termid":"MONDO:0011391","xrefs":{"Monarch":{"xref_id":"0011391"}}}


id: PBO:0029930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribose_1-diphosphate_binding","termid":"PBO:0029930"}


id: MONDO:0010773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial myopathy with diabetes","secondary_identifiers":["Orphanet:2596","UMLS:C1839028","OMIM:500002","MESH:C564026","GARD:3881","MEDGEN:333236"],"synonyms":[{"name":"mitochondrial myopathy with diabetes","type":"exact"},{"name":"mitochondrial myopathy, lipid type","type":"exact"},{"name":"myopathy and diabetes mellitus","type":"exact"}],"termid":"MONDO:0010773","xrefs":{"Monarch":{"xref_id":"0010773"}}}


id: GO:0102926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + solanidine = H+ + gamma-chaconine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete solanidine glucosyltransferase activity (obsolete GO:0102926)","termid":"GO:0102926"}


id: PBO:0069210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 465, pseudogene","termid":"PBO:0069210"}


id: GO:1903705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of siRNA processing.","definition_xrefs":["GO_REF:0000058","PMID:19701182","GOC:BHF","GOC:TermGenie","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of siRNA processing","termid":"GO:0070921"},{"relation_name":"positively_regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of siRNA processing","synonyms":[{"name":"activation of RNA interference, production of guide RNAs","type":"narrow"},{"name":"activation of RNA interference, production of siRNA","type":"narrow"},{"name":"activation of production of guide RNAs involved in RNA interference","type":"narrow"},{"name":"activation of production of siRNA involved in RNA interference","type":"narrow"},{"name":"positive regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"positive regulation of RNA interference, production of siRNA","type":"exact"},{"name":"positive regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"positive regulation of production of siRNA involved in PTGS","type":"exact"},{"name":"positive regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"positive regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"positive regulation of siRNA production","type":"related"},{"name":"up regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"up regulation of RNA interference, production of siRNA","type":"exact"},{"name":"up regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"up regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"up-regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"up-regulation of RNA interference, production of siRNA","type":"exact"},{"name":"up-regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"up-regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"upregulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"upregulation of RNA interference, production of siRNA","type":"exact"},{"name":"upregulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"upregulation of production of siRNA involved in RNA interference","type":"exact"}],"termid":"GO:1903705"}


id: FYPO:0007954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:val","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}


id: PBO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor apraxia 1","termid":"PBO:0010274"}


id: MONDO:0020265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disease with eye involvement (obsolete MONDO:0020265)","secondary_identifiers":["Orphanet:98695"],"termid":"MONDO:0020265","xrefs":{"Monarch":{"xref_id":"0020265"}}}


id: GO:1905265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of blasticidin S.","definition_xrefs":["GOC:TermGenie","GOC:pr","Wikipedia:Blasticidin_S","PMID:23874663","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"},{"relation_name":"is_a","term_name":"blasticidin S metabolic process","termid":"GO:1905264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"blasticidin S catabolic process","synonyms":[{"name":"blasticidin S breakdown","type":"exact"},{"name":"blasticidin S catabolism","type":"exact"},{"name":"blasticidin S degradation","type":"exact"}],"termid":"GO:1905265"}


id: GO:0035196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional miRNA. Includes the cleavage of stem-loop RNA precursors into microRNAs (miRNAs). miRNAs are a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.","definition_xrefs":["GOC:tb","PMID:15066283","PMID:28379604","GOC:dph","GOC:aruk","PMID:15066275","PMID:23985560","GOC:bc","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"miRNA processing","secondary_identifiers":["GO:0030918"],"synonyms":[{"name":"gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"miRNA biogenesis","type":"related"},{"name":"miRNA biosynthetic process","type":"broad"},{"name":"miRNA maturation","type":"exact"},{"name":"miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"microRNA biogenesis","type":"exact"},{"name":"microRNA biosynthesis","type":"broad"},{"name":"microRNA biosynthetic process","type":"broad"},{"name":"microRNA metabolic process","type":"broad"},{"name":"microRNA metabolism","type":"broad"},{"name":"microRNA processing","type":"exact"},{"name":"microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"production of microRNAs involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035196"}


id: PBO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 18","termid":"PBO:0072048"}


id: GO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of the mating projection in unicellular fungi exposed to mating pheromone.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mating projection tip polarisome","termid":"GO:0031563"}


id: PBO:0029933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0029933"}


id: PBO:0084273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for sporulation and plasma membrane sphingolipid content; similar to SUR7; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; GFP-fusion protein is more abundant at MCCs (membrane compartment occupied by Can1) in the presence of glycerol and oleate; YNL194C has a paralog, FMP45, that arose from the whole genome duplication","termid":"PBO:0084273"}


id: PBO:0069903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1194, pseudogene","termid":"PBO:0069903"}


id: GO:2000084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000084"}


id: MONDO:0032573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow failure syndrome 5","secondary_identifiers":["OMIM:618165","UMLS:C4748488","MEDGEN:1648380"],"synonyms":[{"name":"BMFS5","type":"related"},{"name":"BONE MARROW FAILURE SYNDROME 5","type":"related"}],"termid":"MONDO:0032573","xrefs":{"Monarch":{"xref_id":"0032573"}}}


id: PBO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 5","termid":"PBO:0046551"}


id: PBO:0050992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 88","termid":"PBO:0050992"}


id: PBO:0090209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Cox1 translational activator Tac1","termid":"PBO:0090209"}


id: GO:0016116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"carotenoid metabolic process","synonyms":[{"name":"carotenoid metabolism","type":"exact"}],"termid":"GO:0016116"}


id: GO:0008458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-carnitine + octanoyl-CoA = CoA + O-octanoyl-(R)-carnitine.","definition_xrefs":["RHEA:17177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"carnitine O-octanoyltransferase activity","secondary_identifiers":["Reactome:R-HSA-390281","MetaCyc:CARNITINE-O-OCTANOYLTRANSFERASE-RXN","EC:2.3.1.137","KEGG_REACTION:R03779"],"synonyms":[{"name":"carnitine medium-chain acyltransferase activity","type":"related"},{"name":"easily solubilized mitochondrial carnitine palmitoyltransferase","type":"narrow"},{"name":"medium-chain/long-chain carnitine acyltransferase activity","type":"related"},{"name":"octanoyl-CoA:L-carnitine O-octanoyltransferase activity","type":"related"},{"name":"overt mitochondrial carnitine palmitoyltransferase","type":"narrow"}],"termid":"GO:0008458"}


id: PBO:0055991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich transmembrane and O-methyltransferase domain containing","termid":"PBO:0055991"}


id: MONDO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular pseudohypertrophy - hypothyroidism, also known as Kocher-Debre-Semelaigne syndrome is a rare disorder characterized by pseudohypertrophy of muscles due to longstanding hypothyroidism.","definition_xrefs":["Orphanet:2349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular pseudohypertrophy-hypothyroidism syndrome","secondary_identifiers":["GARD:8270","SCTID:716338001","MEDGEN:82860","UMLS:C0270958"],"synonyms":[{"name":"Hoffman syndrome","type":"related"},{"name":"Kocher-Debre-Semelaigne syndrome","type":"exact"},{"name":"Kocher-Debré-Semelaigne syndrome","type":"exact"}],"termid":"MONDO:0016521","xrefs":{"Monarch":{"xref_id":"0016521"}}}


id: PBO:0070612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 80","termid":"PBO:0070612"}


id: _global:formed_as_result_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"output_of","termid":"_global:output_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formed_as_result_of","secondary_identifiers":["RO:0002354"],"termid":"_global:formed_as_result_of"}


id: PBO:0050184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 1","termid":"PBO:0050184"}


id: MONDO:0859257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant dopa-responsive dystonia","termid":"MONDO:0971063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0003441"],"is_obsolete":false,"name":"intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism","secondary_identifiers":["MEDGEN:1805453","Orphanet:660017","UMLS:C5677001","OMIM:619911"],"termid":"MONDO:0859257","xrefs":{"Monarch":{"xref_id":"0859257"}}}


id: MONDO:0005776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by nematodes of the genus Gnathostoma, which is commonly found in Southeast Asia, and which is transmitted via the consumption of contaminated raw/undercooked birds, eels, fish, frogs, or reptiles. The pattern of symptoms is species-dependent, and extraintestinal manifestations are due to larval migration (e.g., pulmonary infiltrates, eosinophilic meningitis, or painful, pruritic subcutaneous swellings, and peripheral blood eosinophilia).","definition_xrefs":["NCIT:C128395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gnathomiasis","secondary_identifiers":["EFO:0007289","DOID:11379","ICD10CM:B83.1","MESH:D058429","SCTID:44086001","UMLS:C0018013","ICD9:128.1","MEDGEN:6651"],"synonyms":[{"name":"Gnathostoma infection","type":"related"},{"name":"Gnathostomiasis","type":"exact"},{"name":"infectious disease by Gnathostoma","type":"exact"}],"termid":"MONDO:0005776","xrefs":{"Monarch":{"xref_id":"0005776"}}}


id: PBO:0077491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 212","termid":"PBO:0077491"}


id: PBO:0047539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 5","termid":"PBO:0047539"}


id: FYPO:0006901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a cell shrinks temporarily, but then recovers its original size.","definition_xrefs":["PomBase:mah","PMID:31116668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cell deflation and reinflation","synonyms":[{"name":"cell deflation and reinflation during mitotic cell cycle","type":"related"},{"name":"cell deflation and reinflation during vegetative growth","type":"exact"},{"name":"vegetative cell deflation and reinflation","type":"exact"}],"termid":"FYPO:0006901"}


id: PBO:0079885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 2","termid":"PBO:0079885"}


id: MONDO:0008812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AREDYLD stands for acral-renal-ectodermal-dysplasia-lipoatrophic-diabetes. This syndrome has been described in three individuals, one of whom was born to consanguineous parents. All patients had lipoatrophy, diabetes mellitus, generalized hypotrichosis, ectodermal dysplasia, renal alterations, dental abnormalities and other manifestations. It is probably transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1133"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"AREDYLD syndrome","secondary_identifiers":["OMIM:207780","MEDGEN:87435","GARD:8509","ICD9:753.3","SCTID:237610008","MESH:C537427","icd11.foundation:2007371732","UMLS:C0342280"],"synonyms":[{"name":"AREDYLD","type":"related"},{"name":"acral renal ectodermal dysplasia lipoatrophic diabetes","type":"related"},{"name":"acrorenal Field defect, ectodermal dysplasia, and lipoatrophic diabetes","type":"related"},{"name":"acrorenal defect-ectodermal dysplasia-diabetes syndrome","type":"exact"}],"termid":"MONDO:0008812","xrefs":{"Monarch":{"xref_id":"0008812"}}}


id: GO:1903749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16857185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein localization to mitochondrion","secondary_identifiers":["Reactome:R-HSA-75108","Reactome:R-HSA-114452"],"synonyms":[{"name":"activation of establishment of protein localisation to mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization in mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization to mitochondrion","type":"narrow"},{"name":"positive regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"positive regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization to mitochondrion","type":"exact"}],"termid":"GO:1903749"}


id: PBO:0017411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-agent_in","termid":"PBO:0017411"}


id: PR:O74564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf9 gene.","definition_xrefs":["UniProtKB:O74564","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.11c","synonyms":[{"name":"Spom972h-wtf9","type":"exact"}],"termid":"PR:O74564"}


id: PBO:0056577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple C2 and transmembrane domain containing 1","termid":"PBO:0056577"}


id: PBO:0042393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member g","termid":"PBO:0042393"}


id: PBO:0036038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0036038"}


id: PBO:0113370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains an Stb5p binding site and Stb5p binding is enriched at the promoter; negative regulator of nonselective autophagy; protein abundance increases in response to DNA replication stress","termid":"PBO:0113370"}


id: MONDO:0017498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital absence of both forearm and hand, unilateral is a rare developmental defect during embryogenesis characterized by a unilateral, transverse absence of the radius and ulna (of varying terminal lengths), as well as all the elements composing the hand. Left or right side may be involved.","definition_xrefs":["Orphanet:295093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both forearm and hand","termid":"MONDO:0017443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both forearm and hand, unilateral","secondary_identifiers":["icd11.foundation:2019491585"],"synonyms":[{"name":"radio-ulnar terminal transverse meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017498","xrefs":{"Monarch":{"xref_id":"0017498"}}}


id: PBO:0053428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 373","termid":"PBO:0053428"}


id: PBO:0074205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A13 antisense RNA 1","termid":"PBO:0074205"}


id: PBO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PY motif","termid":"PBO:0000343"}


id: GO:0005783
data:
  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id: PATO:0001756
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id: FYPO:0004276
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id: GO:0090557
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id: FYECO:0000104
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id: PR:Q10432
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id: PBO:0067611
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id: PBO:0066634
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id: PBO:0056200
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id: SO:0002082
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id: MOD:01378
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id: GO:0160037
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id: GO:1904234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aconitate hydratase activity.","definition_xrefs":["GOC:BHF","GOC:rl","GO_REF:0000059","GOC:TermGenie","PMID:18160053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aconitate hydratase activity","synonyms":[{"name":"activation of aconitase activity","type":"narrow"},{"name":"activation of aconitate hydratase activity","type":"narrow"},{"name":"activation of cis-aconitase activity","type":"narrow"},{"name":"activation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"narrow"},{"name":"activation of citrate(isocitrate) hydro-lyase activity","type":"narrow"},{"name":"positive regulation of aconitase activity","type":"exact"},{"name":"positive regulation of cis-aconitase activity","type":"exact"},{"name":"positive regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"positive regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"},{"name":"up regulation of aconitase activity","type":"exact"},{"name":"up regulation of aconitate hydratase activity","type":"exact"},{"name":"up regulation of cis-aconitase activity","type":"exact"},{"name":"up regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"up regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"},{"name":"up-regulation of aconitase activity","type":"exact"},{"name":"up-regulation of aconitate hydratase activity","type":"exact"},{"name":"up-regulation of cis-aconitase activity","type":"exact"},{"name":"up-regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"up-regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"},{"name":"upregulation of aconitase activity","type":"exact"},{"name":"upregulation of aconitate hydratase activity","type":"exact"},{"name":"upregulation of cis-aconitase activity","type":"exact"},{"name":"upregulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"upregulation of citrate(isocitrate) hydro-lyase activity","type":"exact"}],"termid":"GO:1904234"}


id: PBO:0029049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_to_cell_cortex_during_nitrogen_starvation","termid":"PBO:0029049"}


id: PBO:0108918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 4 (pseudogene)","termid":"PBO:0108918"}


id: PBO:0003482
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIng-localized protein with homology to Diaphanous GTPase-binding domain","termid":"PBO:0003482"}


id: GO:0140796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 8)= histone H3 L-citrullyl (position 8) + NH4+, resulting in histone H3 citrullination at position 8.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140096","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"histone H3R8 arginine deiminase activity","synonyms":[{"name":"H3-R8 citrullination","type":"exact"},{"name":"histone H3-R8 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R8 specific)","type":"exact"}],"termid":"GO:0140796"}


id: PBO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 11 pseudogene","termid":"PBO:0062156"}


id: PBO:0044198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin G","termid":"PBO:0044198"}


id: GO:2000609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone generation","termid":"GO:2000609"}


id: PBO:0040574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-glucuronyltransferase 1","termid":"PBO:0040574"}


id: MONDO:0014911
data:
  {"annotated_genes":["SJAG_03545"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87557],"is_not":false,"summary":null,"term":"MONDO:0014911"}]},"cv_name":"mondo","definition":"A rare, genetic, syndromic intellectual disability disease characterized by severe intrauterine and post-natal growth delay, moderate to severe intellectual disability, and neonatal-onset hepatopathy with fibrosis, steatosis, and/or cholestasis, occasionally leading to liver failure. Additional variable manifestations include muscular hypotonia, zinc deficiency, recurrent infections, diabetes mellitus, joint contractures, skin and joint laxity, hypervitaminosis D, and sensorineural hearing loss.","definition_xrefs":["Orphanet:541423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"growth retardation, intellectual developmental disorder, hypotonia, and hepatopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934687","GARD:17980","OMIM:617093","UMLS:C4310720"],"synonyms":[{"name":"GRIDHH","type":"exact"},{"name":"Growth retardation, intellectual developmental disorder, hypotonia, and hepatopathy","type":"exact"},{"name":"growth retardation, impaired intellectual development, hypotonia, and hepatopathy","type":"exact"},{"name":"growth retardation, intellectual developmental disorder, hypotonia, and hepatopathy; GRIDHH","type":"exact"}],"termid":"MONDO:0014911","terms_by_termid":{"MONDO:0014911":null},"xrefs":{"Monarch":{"xref_id":"0014911"}}}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: PBO:0057614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1180","termid":"PBO:0057614"}


id: SO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The tanscription start site that is most frequently used for transcription of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"TSS","termid":"SO:0000315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major_TSS","synonyms":[{"name":"major TSS","type":"exact"},{"name":"major transcription start site","type":"exact"}],"termid":"SO:0001238"}


id: PBO:0091509
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3855791delG","termid":"PBO:0091509"}


id: MONDO:0006645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease affecting more than one nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"alcoholic polyneuropathy","secondary_identifiers":["DOID:14183","MESH:D020269","UMLS:C0085677","NCIT:C26926","EFO:1000803","icd11.foundation:597341977","ICD9:357.5","ICD10CM:G62.1","MEDGEN:39087","SCTID:7916009"],"synonyms":[{"name":"alcohol-related polyneuropathy","type":"exact"},{"name":"alcoholic neuropathy","type":"exact"}],"termid":"MONDO:0006645","xrefs":{"Monarch":{"xref_id":"0006645"}}}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:11857757","Unimod:65#K","PubMed:12175151","PubMed:11344537","PubMed:15189151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: GO:1903928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyanide stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21854848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to cyanide","termid":"GO:1903927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyanide","termid":"GO:1903928"}


id: GO:0071578
data:
  {"annotated_genes":["SJAG_04185","SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104493,113521],"is_not":false,"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of zinc(2+) ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:18637840","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02968":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"zinc ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006831","GO:0006830","GO:0044749","GO:0140160"],"synonyms":[{"name":"high-affinity zinc II ion transmembrane import","type":"narrow"},{"name":"high-affinity zinc II ion transport","type":"narrow"},{"name":"low-affinity zinc II ion transport","type":"narrow"},{"name":"zinc II ion plasma membrane import","type":"exact"},{"name":"zinc II ion transmembrane import","type":"exact"},{"name":"zinc import","type":"exact"},{"name":"zinc ion import into cell","type":"exact"},{"name":"zinc ion transmembrane import","type":"related"},{"name":"zinc uptake","type":"exact"}],"termid":"GO:0071578","terms_by_termid":{"GO:0071578":null}}


id: GO:0038001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of information from one cell to another, where the signal travels from the signal-producing cell to the receiving cell by passive diffusion or bulk flow in intercellular fluid. The signaling cell and the receiving cell are usually in the vicinity of each other.","definition_xrefs":["GOC:mtg_signaling_feb11","ISBN:3527303782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"paracrine signaling","synonyms":[{"name":"paracrine signalling","type":"exact"}],"termid":"GO:0038001"}


id: GO:0034142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 4.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 4 signaling pathway","secondary_identifiers":["Reactome:R-HSA-166016"],"synonyms":[{"name":"TLR4 signaling pathway","type":"exact"},{"name":"toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034142"}


id: GO:0097692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one methyl group to lysine at position 4 of the histone.","definition_xrefs":["GOC:jh2","PMID:26320581"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 monomethylation (obsolete GO:0097692)","termid":"GO:0097692"}


id: GO:1901224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the non-canonical NF-kappaB cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical NF-kappaB signal transduction","termid":"GO:1901222"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of non-canonical NF-kappaB signal transduction","secondary_identifiers":["GO:0008588","GO:0042346"],"synonyms":[{"name":"activation of NIK/NF-kappaB cascade","type":"narrow"},{"name":"activation of non-canonical NF-KB signaling","type":"exact"},{"name":"activation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"activation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"activation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"positive regulation of NF-kappaB import into nucleus","type":"narrow"},{"name":"positive regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"positive regulation of NIK/NF-kappaB signaling","type":"exact"},{"name":"positive regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"positive regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"positive regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"positive regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"up regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"up regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"up regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"up regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"up regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"up-regulation of NIK/NF-kappaB cascade","type":"related"},{"name":"up-regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"up-regulation of noncanonical NF-kappaB signaling","type":"broad"},{"name":"up-regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"up-regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"upregulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"upregulation of non-canonical NF-KB signaling","type":"exact"},{"name":"upregulation of noncanonical NF-kappaB signaling","type":"broad"},{"name":"upregulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"upregulation of p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:1901224"}


id: MONDO:0011463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, autosomal recessive axonal hereditary motor and sensory neuropathy disease characterized by prenatal onset of a severe sensorimotor axonal polyneuropathy (reflected by reduced fetal movement and polyhydramnios), manifesting, at birth, with respiratory failure requiring mechanical ventilation, profound muscular hypotonia, rapidly progressing distal muscle weakness, and absent deep tendon reflexes, in the absence of contractures, leading to death before 8 months of age. Neuropathological findings show severe loss of large- and medium-sized myelinated fibers without signs of demyelination.","definition_xrefs":["Orphanet:538096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, lethal neonatal, axonal sensorimotor, autosomal recessive","secondary_identifiers":["OMIM:604431","UMLS:C1858353","GARD:17976","MEDGEN:348918","MESH:C565773"],"synonyms":[{"name":"polyneuropathy, lethal neonatal, axonal sensorimotor, autosomal recessive","type":"exact"}],"termid":"MONDO:0011463","xrefs":{"Monarch":{"xref_id":"0011463"}}}


id: MONDO:0012879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 2q32.1.","definition_xrefs":["DOID:0070090"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 14","secondary_identifiers":["OMIM:612361","MEDGEN:436991","UMLS:C2677614"],"synonyms":[{"name":"SCZD14","type":"exact"},{"name":"Sczd14","type":"related"},{"name":"schizophrenia 14","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 2Q32-related","type":"related"},{"name":"schizophrenia type 14","type":"exact"},{"name":"schizophrenia, susceptibility to, 14","type":"exact"}],"termid":"MONDO:0012879","xrefs":{"Monarch":{"xref_id":"0012879"}}}


id: PBO:0042280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 pseudogene 1","termid":"PBO:0042280"}


id: PBO:0008888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific HMG-box transcription factor Mc at silenced MAT3 locus","termid":"PBO:0008888"}


id: MONDO:0010575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of congenital mixed hearing loss with perilymphatic gusher (Gusher syndrome or DFN3), hypogonadism and abnormal behavior.","definition_xrefs":["Orphanet:90646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-hypogonadism syndrome","secondary_identifiers":["MEDGEN:335003","OMIM:304350","MESH:C564435","GARD:1691","UMLS:C1844680"],"synonyms":[{"name":"DHS","type":"related"},{"name":"deafness hypogonadism syndrome","type":"related"},{"name":"deafness-hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0010575","xrefs":{"Monarch":{"xref_id":"0010575"}}}


id: PBO:0067887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 189","termid":"PBO:0067887"}


id: PR:Q9UTI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11124:SF3","PRO:DNx","OMA:SCHPO01555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.06","secondary_identifiers":["UniProtKB:Q9UTI5"],"synonyms":[{"name":"Spom972h-VPS29","type":"exact"}],"termid":"PR:Q9UTI5"}


id: GO:0005920
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate junction","termid":"GO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"smooth septate junction","synonyms":[{"name":"zonula continua","type":"exact"}],"termid":"GO:0005920"}


id: MONDO:0016425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hughes-Stovin syndrome (HSS) is a life-threatening disorder, believed to be a cardiovascular clinical variant manifestation of Behcet's disease (BD). It is characterized by the association of multiple pulmonary artery aneurysms (PAAs) and peripheral venous thrombosis.","definition_xrefs":["Orphanet:228116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hughes-Stovin syndrome","secondary_identifiers":["SCTID:721226005","GARD:20569","MEDGEN:929147","icd11.foundation:1047123748","UMLS:C4303478"],"termid":"MONDO:0016425","xrefs":{"Monarch":{"xref_id":"0016425"}}}


id: FYECO:0000015
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119735,119736,119729,119732],"is_not":false,"summary":null,"term":"FYECO:0000015"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium promoting mating and sporulation.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"sporulation medium","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"SPA medium","type":"narrow"},{"name":"malt extract medium","type":"narrow"},{"name":"mating medium","type":"related"}],"termid":"FYECO:0000015","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000015":null}}


id: GO:0018553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(2,3-dihydroxyphenyl)propionate + O2 = 2-hydroxy-6-keto-nona-2,4-dienedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-(2,3-dihydroxyphenyl)propionate 1,2-dioxygenase activity (obsolete GO:0018553)","termid":"GO:0018553"}


id: PBO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tacrolimus_during_salt_stress","termid":"PBO:0030456"}


id: PBO:0004047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20 small nucleolar RNA","termid":"PBO:0004047"}


id: GO:0075311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"positively_regulates","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium development","termid":"GO:0075311"}


id: PBO:0053814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1075","termid":"PBO:0053814"}


id: PBO:0052764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 56","termid":"PBO:0052764"}


id: PBO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in rRNA processing from interactions, human TTC27 ortholog","termid":"PBO:0110066"}


id: PBO:0029996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies_during_glucose_starvation","termid":"PBO:0029996"}


id: MONDO:0011889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2I (CMT2I) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by a late onset with severe sensory loss (paresthesia and hypoesthesia) associated with distal weakness, mainly of the legs, and absent or reduced deep tendon reflexes.","definition_xrefs":["Orphanet:99942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2I","secondary_identifiers":["MEDGEN:854756","icd11.foundation:1858507973","SCTID:717013009","OMIM:607677","UMLS:C3888087","DOID:0110158","GARD:9197"],"synonyms":[{"name":"CMT 2I","type":"related"},{"name":"CMT2I","type":"exact"},{"name":"Charcot Marie Tooth disease type 2I","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2I","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2I","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2I","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2I","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2I","type":"related"}],"termid":"MONDO:0011889","xrefs":{"Monarch":{"xref_id":"0011889"}}}


id: PBO:0088972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30","termid":"PBO:0088972"}


id: FYPO:0007163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule-based movement is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}


id: PBO:0059296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 2","termid":"PBO:0059296"}


id: PBO:0049760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2","termid":"PBO:0049760"}


id: PBO:0109612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA lyase like 1","termid":"PBO:0109612"}


id: PBO:0055214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2640","termid":"PBO:0055214"}


id: PATO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000797 urination value (obsolete PATO:0000797)","termid":"PATO:0000797"}


id: MONDO:0014350
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86758],"is_not":false,"summary":null,"term":"MONDO:0014350"}]},"cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the DNA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:856014","OMIM:615807","DOID:0070009","UMLS:C3891452","GARD:16013"],"synonyms":[{"name":"DNA2 Seckel syndrome","type":"exact"},{"name":"SCKL8","type":"exact"},{"name":"Seckel syndrome 8","type":"exact"},{"name":"Seckel syndrome caused by mutation in DNA2","type":"exact"},{"name":"Seckel syndrome type 8","type":"exact"}],"termid":"MONDO:0014350","terms_by_termid":{"MONDO:0014350":null},"xrefs":{"Monarch":{"xref_id":"0014350"}}}


id: PBO:0016973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR90","termid":"PBO:0016973"}


id: MONDO:0022904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cryoglobulinemia","termid":"MONDO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cryofibrinogenemia","secondary_identifiers":["MEDGEN:78798","MESH:C536218","SCTID:10934005","UMLS:C0272263","ICD9:286.9"],"synonyms":[{"name":"cryofibrinogenemia","type":"exact"}],"termid":"MONDO:0022904","xrefs":{"Monarch":{"xref_id":"0022904"}}}


id: MONDO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the choroid plexus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroid plexus cancer","termid":"MONDO:0002681"},{"relation_name":"is_a","term_name":"intraventricular meningioma","termid":"MONDO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choroid plexus meningioma","secondary_identifiers":["NCIT:C4719","UMLS:C0431118","MEDGEN:98458","DOID:4584"],"synonyms":[{"name":"choroid meningioma (morphologic abnormality)","type":"exact"},{"name":"choroid plexus meningioma","type":"exact"},{"name":"choroid plexus meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of choroid plexus","type":"exact"},{"name":"meningioma of choroid plexus","type":"related"},{"name":"meningioma of the choroid plexus","type":"exact"}],"termid":"MONDO:0003053","xrefs":{"Monarch":{"xref_id":"0003053"}}}


id: MONDO:0014333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral perisylvian polymicrogyria","termid":"MONDO:0020340"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"polymicrogyria, bilateral perisylvian, autosomal recessive","secondary_identifiers":["MEDGEN:816735","OMIM:615752","GARD:16009","UMLS:C3810405"],"synonyms":[{"name":"BPPR","type":"related"},{"name":"Pmgr","type":"related"},{"name":"polymicrogyria, bilateral perisylvian","type":"exact"},{"name":"polymicrogyria, bilateral perisylvian, autosomal recessive","type":"exact"}],"termid":"MONDO:0014333","xrefs":{"Monarch":{"xref_id":"0014333"}}}


id: GO:0034967
data:
  {"annotated_genes":["SJAG_04389","SJAG_04396","SJAG_04186","SJAG_01926","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79053,79478,93582,97544,104503],"is_not":false,"summary":null,"term":"GO:0034967"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex that is involved in transcriptional regulation. In S. cerevisiae, this complex consists of Set3p, Snt1p, Hos4p, Sif2p, Cpr1p, Hos2p, and Hst1p.","definition_xrefs":["PMID:11711434","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_03627":null,"SJAG_04186":null,"SJAG_04389":null,"SJAG_04396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Set3 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"HDAC3 complex","type":"exact"},{"name":"SET3C","type":"exact"}],"termid":"GO:0034967","terms_by_termid":{"GO:0034967":null}}


id: PBO:0072826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival associated mitochondrial melanoma specific oncogenic non-coding RNA","termid":"PBO:0072826"}


id: MONDO:0100434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathological condition resulting from chronic exposure to hypoxia at high altitude. The syndrome is characterized by an excessive number of red blood cells associated with a high blood hemoglobin concentration ([Hb]), hypoxemia, and, in some cases, pulmonary hypertension. Clinical signs include headache, fatigue, sleep disturbances, dyspnea, digestive complaints, and high risk of thrombotic events.","definition_xrefs":["EFO:0010143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altitude sickness","termid":"MONDO:0006625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic mountain sickness","secondary_identifiers":["SCTID:241975000"],"synonyms":[{"name":"Monge's disease","type":"exact"}],"termid":"MONDO:0100434","xrefs":{"Monarch":{"xref_id":"0100434"}}}


id: PBO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_multiseptate_cell","termid":"PBO:0031296"}


id: PBO:0070395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORA antisense RNA 2","termid":"PBO:0070395"}


id: PBO:0048026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled related protein","termid":"PBO:0048026"}


id: MONDO:0000060
data:
  {"annotated_genes":["SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008872"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0000060","terms_by_termid":{"MONDO:0008872":null},"xrefs":{"Monarch":{"xref_id":"0000060"}}}


id: GO:0044587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellopentaose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellopentaose binding","termid":"GO:0044587"}


id: PR:O14287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.01","synonyms":[{"name":"Spom972h-SPAC9E9.01","type":"exact"}],"termid":"PR:O14287"}


id: GO:1900233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of single-species biofilm formation","termid":"GO:1900192"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"activation of single-species biofilm formation on inanimate substrate","type":"narrow"},{"name":"up regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"up-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"upregulation of single-species biofilm formation on inanimate substrate","type":"exact"}],"termid":"GO:1900233"}


id: GO:0015658
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103120,110340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of branched-chain amino acids from one side of a membrane to the other. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["GOC:bf","GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"branched-chain amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9672770","GO:1901240"],"synonyms":[{"name":"branched-chain aliphatic amino acid transmembrane transporter activity","type":"exact"},{"name":"branched-chain aliphatic amino acid transporter activity","type":"exact"},{"name":"leucine/valine/isoleucine permease activity","type":"related"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0015658","terms_by_termid":{"GO:0015188":null}}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: FYPO:0007396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell occurs to a lower extent than normal.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased heme import","synonyms":[{"name":"decreased haem import","type":"exact"},{"name":"decreased heme import during mitotic cell cycle","type":"related"},{"name":"decreased heme import during vegetative growth","type":"exact"},{"name":"decreased heme import into cell","type":"exact"},{"name":"reduced heme import","type":"exact"}],"termid":"FYPO:0007396"}


id: GO:1903341
data:
  {"annotated_genes":["SJAG_00100","SJAG_03048","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108673,102695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[116536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25103240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903341","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: PBO:0078427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 4-1","termid":"PBO:0078427"}


id: PBO:0004272
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARC syndrome","termid":"PBO:0004272"}


id: PBO:0060676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuron derived neurotrophic factor","termid":"PBO:0060676"}


id: GO:0047900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate = ADP + formyl phosphate + H+.","definition_xrefs":["EC:2.7.2.6","RHEA:16009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"formate kinase activity","secondary_identifiers":["KEGG_REACTION:R00518","MetaCyc:FORMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:formate phosphotransferase activity","type":"related"}],"termid":"GO:0047900"}


id: GO:0007637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension, through direct muscle actions, of the proboscis (the trunk-like extension of the mouthparts on the adult external head) in response to a nutritional stimulus.","definition_xrefs":["GOC:jid","FB:FBrf0044924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"},{"relation_name":"is_a","term_name":"behavioral response to nutrient","termid":"GO:0051780"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis extension reflex","synonyms":[{"name":"behavioral response to nutritional stimulus, proboscis extension","type":"exact"},{"name":"proboscis extension in response to nutritional stimulus","type":"exact"}],"termid":"GO:0007637"}


id: PBO:0052062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 2B","termid":"PBO:0052062"}


id: SO:1000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a purine nucleotide, A or G , into a pyrimidine nucleotide C or T.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine_to_pyrimidine_transversion","synonyms":[{"name":"purine to pyrimidine transversion","type":"exact"}],"termid":"SO:1000023"}


id: MONDO:0800117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A botromycosis that involves the skin and subcutaneous tissue (it is a more common type).","definition_xrefs":["PMID:9524833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botryomycosis","termid":"MONDO:0400006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous botryomycosis","secondary_identifiers":["UMLS:C0554463","icd11.foundation:1888048529","MEDGEN:640409"],"termid":"MONDO:0800117","xrefs":{"Monarch":{"xref_id":"0800117"}}}


id: GO:0034131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"regulation of TLR1 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034131"}


id: MONDO:0018053
data:
  {"annotated_genes":["SJAG_01235","SJAG_03112","SJAG_00159","SJAG_00995","SJAG_03206","SJAG_01207","SJAG_01797","SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[85649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[85650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"},{"annotations":[85663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010495"},{"annotations":[85981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014841"},{"annotations":[87331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032806"},{"annotations":[86454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030517"},{"annotations":[86459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","definition":"Trichothiodystrophy or TTD is a heterogeneous group disorders characterized by short, brittle hair with low-sulphur content (due to an abnormal synthesis of the sulfur containing keratins).","definition_xrefs":["Orphanet:33364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00159":null,"SJAG_00995":null,"SJAG_01159":null,"SJAG_01207":null,"SJAG_01235":null,"SJAG_01797":null,"SJAG_03112":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:723551003","MedDRA:10044628","MEDGEN:363064","icd11.foundation:1366758649","DOID:0111866","NANDO:1200627","OMIMPS:601675","GARD:12109","UMLS:C1955934","NORD:1292","NCIT:C4924"],"synonyms":[{"name":"trichothiodystrophy syndrome","type":"exact"}],"termid":"MONDO:0018053","terms_by_termid":{"MONDO:0010495":null,"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014841":null,"MONDO:0030517":null,"MONDO:0030518":null,"MONDO:0032806":null},"xrefs":{"Monarch":{"xref_id":"0018053"}}}


id: MONDO:0005488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A scoliosis with no known cause arising in adolescent.","definition_xrefs":["EFO:0005423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic scoliosis","termid":"MONDO:0000726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adolescent idiopathic scoliosis","secondary_identifiers":["UMLS:C0410702","SCTID:203646004","Orphanet:3153","MEDGEN:450543"],"termid":"MONDO:0005488","xrefs":{"Monarch":{"xref_id":"0005488"}}}


id: GO:0033774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region in the lower half of some cells formed from extensive infoldings of the basal plasma membrane; includes cytoplasm adjacent to the infolded membrane.","definition_xrefs":["GOC:sart","PMID:11640882","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal labyrinth","termid":"GO:0033774"}


id: PBO:0081706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 626","termid":"PBO:0081706"}


id: MONDO:0019589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","secondary_identifiers":["SCTID:232333009","icd11.foundation:186534168","Orphanet:90642"],"synonyms":[{"name":"obsolete syndromic genetic hearing loss","type":"exact"},{"name":"syndromic genetic deafness","type":"narrow"},{"name":"syndromic hearing loss","type":"broad"}],"termid":"MONDO:0019589","xrefs":{"Monarch":{"xref_id":"0019589"}}}


id: PBO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLDc domain protein 2","termid":"PBO:0004411"}


id: PBO:0079617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L2 (pseudogene)","termid":"PBO:0079617"}


id: GO:0070888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:11812799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0000976","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"E-box binding","synonyms":[{"name":"E-box promoter binding","type":"exact"}],"termid":"GO:0070888"}


id: PBO:0028560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoskeleton_during_vegetative_growth","termid":"PBO:0028560"}


id: PBO:0076091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STUB1 divergent transcript","termid":"PBO:0076091"}


id: MONDO:0012120
data:
  {"annotated_genes":["SJAG_03310"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86792],"is_not":false,"summary":null,"term":"MONDO:0012120"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase phosphatase deficiency is a very rare subtype of pyruvate dehydrogenase deficiency (PDHD) characterized by lactic acidemia in the neonatal period.","definition_xrefs":["Orphanet:79246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005244","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837429","icd11.foundation:1709497558","GARD:9888","MEDGEN:332448","MESH:C536258","OMIM:608782"],"synonyms":[{"name":"PDH phosphatase deficiency","type":"exact"},{"name":"PDHPD","type":"related"},{"name":"lactic acidemia with pyruvate dehydrogenase phosphatase deficiency","type":"related"},{"name":"pyruvate dehydrogenase phosphatase deficiency","type":"exact"}],"termid":"MONDO:0012120","terms_by_termid":{"MONDO:0012120":null},"xrefs":{"Monarch":{"xref_id":"0012120"}}}


id: FYPO:0002134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0002131"],"is_obsolete":false,"name":"decreased protein-RNA interaction","synonyms":[{"name":"decreased RNA binding","type":"exact"},{"name":"decreased RNA-protein interaction","type":"exact"},{"name":"reduced RNA binding","type":"exact"}],"termid":"FYPO:0002134"}


id: PBO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis","termid":"PBO:0002343"}


id: PBO:0051432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-13 (pseudogene)","termid":"PBO:0051432"}


id: MONDO:0003631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma that arises from the cervix. It is characterized by the presence of papillary patterns and cellular budding. Psammoma bodies are often seen.","definition_xrefs":["NCIT:C40201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical serous adenocarcinoma","secondary_identifiers":["DOID:5752","MEDGEN:308950","UMLS:C1516431"],"synonyms":[{"name":"cervical serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0003631","xrefs":{"Monarch":{"xref_id":"0003631"}}}


id: PR:Q9USS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC557.05 gene.","definition_xrefs":["UniProtKB:Q9USS1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C557.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC557.05","synonyms":[{"name":"Spom972h-SPBC557.05","type":"exact"}],"termid":"PR:Q9USS1"}


id: GO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["ISBN:0395825172","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine metabolic process","synonyms":[{"name":"phenylethylamine metabolism","type":"exact"}],"termid":"GO:0042443"}


id: PBO:0061891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase, ATP-hydrolysing","termid":"PBO:0061891"}


id: GO:0031401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification process","synonyms":[{"name":"activation of protein modification","type":"narrow"},{"name":"stimulation of protein modification","type":"narrow"},{"name":"up regulation of protein modification","type":"exact"},{"name":"up-regulation of protein modification","type":"exact"},{"name":"upregulation of protein modification","type":"exact"}],"termid":"GO:0031401"}


id: GO:1904408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to melatonin.","definition_xrefs":["GOC:TermGenie","PMID:10379923","GO_REF:0000067","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"melatonin binding","termid":"GO:1904408"}


id: PBO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 2","termid":"PBO:0045869"}


id: PBO:0043299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 18 member A","termid":"PBO:0043299"}


id: GO:0008438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphosphate + a purine nucleoside = phosphate + a purine mononucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-5-phosphate kinase (obsolete GO:0008438)","synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"exact"}],"termid":"GO:0008438"}


id: PBO:0078312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 8-1","termid":"PBO:0078312"}


id: MONDO:0009302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gonadal dysgenesis with multiple anomalies is an association syndrome described only once in two sisters aged 1 1/2 and 8 1/2 years. They had a 46,XY karyotype, cleft lip and palate, preauricular pits, and a 'squashed down' appearance because of a short columella and small nares. Other anomalies included broad hands and feet, and a hypermuscular appearance. Cardiac, renal, musculoskeletal, and ectodermal anomalies were also present. Ectodermal defects included 'punched out scalp defects' and unusual positioning of hair whorls. They also had short stature, streak gonads, and mild developmental delay. The mode of inheritance is most likely autosomal recessive.","definition_xrefs":["Orphanet:1770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY type gonadal dysgenesis-associated anomalies syndrome","secondary_identifiers":["MESH:C565536","MEDGEN:344696","GARD:2541","OMIM:233430","UMLS:C1856272"],"synonyms":[{"name":"gonadal dysgenesis XY type associated anomalies","type":"related"},{"name":"gonadal dysgenesis, 10Y type, with associated anomalies","type":"related"},{"name":"gonadal dysgenesis, XY type, with associated anomalies","type":"related"}],"termid":"MONDO:0009302","xrefs":{"Monarch":{"xref_id":"0009302"}}}


id: PBO:0117028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPIN2 antisense RNA 2","termid":"PBO:0117028"}


id: PBO:0045320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain gamma, pseudogene","termid":"PBO:0045320"}


id: MOD:00830
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an N-methyl-L-proline.","definition_xrefs":["PubMed:3127388","RESID:AA0419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-proline","synonyms":[{"name":"(S)-1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES N-methylproline","type":"exact"},{"name":"N-methyl-L-proline","type":"exact"},{"name":"N-methylated L-proline","type":"exact"},{"name":"NMePro","type":"exact"},{"name":"hygric acid","type":"exact"}],"termid":"MOD:00830"}


id: FYPO:0005264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dithiothreitol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to dithiothreitol","synonyms":[{"name":"resistance to 1,4-dithiothreitol","type":"exact"},{"name":"resistance to dithiothreitol during mitotic cell cycle","type":"related"},{"name":"resistance to dithiothreitol during vegetative growth","type":"exact"},{"name":"resistant to DTT","type":"exact"},{"name":"resistant to dithiothreitol","type":"exact"}],"termid":"FYPO:0005264"}


id: PR:Q09927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aca1 gene.","definition_xrefs":["UniProtKB:Q09927","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.04","synonyms":[{"name":"Spom972h-aca1","type":"exact"}],"termid":"PR:Q09927"}


id: PBO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 2","termid":"PBO:0043670"}


id: MONDO:0012743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the CACNB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 4","secondary_identifiers":["DOID:0110221","UMLS:C2678477","GARD:10362","OMIM:611876","MEDGEN:395632","MESH:C567508"],"synonyms":[{"name":"BRGDA4","type":"exact"},{"name":"Brugada syndrome 4","type":"exact"},{"name":"Brugada syndrome caused by mutation in CACNB2","type":"exact"},{"name":"Brugada syndrome type 4","type":"exact"},{"name":"CACNB2 Brugada syndrome","type":"exact"}],"termid":"MONDO:0012743","xrefs":{"Monarch":{"xref_id":"0012743"}}}


id: MONDO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary and is characterized by the presence of mullerian-type epithelial tissue in a mesenchymal sarcomatous stroma. The presence of a high grade sarcomatous component is associated with recurrences and metastases.","definition_xrefs":["NCIT:C7317"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian carcinosarcoma","termid":"MONDO:0003792"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian adenosarcoma","secondary_identifiers":["DOID:4115","MEDGEN:277458","UMLS:C1335169"],"synonyms":[{"name":"adenosarcoma of ovary","type":"exact"},{"name":"ovarian Mullerian adenosarcoma","type":"exact"},{"name":"ovarian Müllerian adenosarcoma","type":"exact"},{"name":"ovarian adenosarcoma","type":"exact"},{"name":"ovarian mesodermal adenosarcoma","type":"exact"},{"name":"ovarian mullerian adenosarcoma","type":"exact"},{"name":"ovary adenosarcoma","type":"exact"}],"termid":"MONDO:0002880","xrefs":{"Monarch":{"xref_id":"0002880"}}}


id: MONDO:0035862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare syndromic intellectual disability without multiple congenital anomalies/dysmorphic syndrome (obsolete MONDO:0035862)","secondary_identifiers":["Orphanet:611314"],"termid":"MONDO:0035862","xrefs":{"Monarch":{"xref_id":"0035862"}}}


id: GO:0031299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + taurine = L-alanine + sulfoacetaldehyde.","definition_xrefs":["RHEA:10420","PMID:11082195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"taurine-pyruvate aminotransferase activity","secondary_identifiers":["EC:2.6.1.77","KEGG_REACTION:R05652","MetaCyc:TAURINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"Tpa","type":"related"},{"name":"taurine:pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0031299"}


id: GO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via the activity of voltage-gated calcium channels.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051929)","synonyms":[{"name":"activation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via voltage gated calcium channel","type":"exact"},{"name":"stimulation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via voltage gated calcium channel","type":"exact"}],"termid":"GO:0051929"}


id: PBO:0005084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate-tRNA ligase (predicted)","termid":"PBO:0005084"}


id: PBO:0048943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 1","termid":"PBO:0048943"}


id: GO:0007135
data:
  {"annotated_genes":["SJAG_00678","SJAG_04508","SJAG_03989","SJAG_00646","SJAG_00207","SJAG_03090","SJAG_04271","SJAG_00486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105447,107152,108034],"is_not":false,"summary":null,"term":"GO:0007135"},{"annotations":[88211,94169],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[88346,111993,113536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"}]},"cv_name":"biological_process","definition":"The second nuclear division of meiosis, in which the two chromatids in each chromosome are separated, resulting in four daughter nuclei from the two nuclei produced in meiosis II.","definition_xrefs":["GOC:dph","GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"},{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Meiosis#Meiosis_II"],"synonyms":[{"name":"meiosis II nuclear division","type":"exact"}],"termid":"GO:0007135","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null}}


id: MONDO:0007054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromial dimples","secondary_identifiers":["OMIM:102350","MEDGEN:869278","UMLS:C4023704"],"synonyms":[{"name":"acromial dimples","type":"exact"},{"name":"supraspinous fossae, congenital","type":"related"}],"termid":"MONDO:0007054","xrefs":{"Monarch":{"xref_id":"0007054"}}}


id: GO:0071341
data:
  {"annotated_genes":["SJAG_04486","SJAG_03596","SJAG_04280","SJAG_00279","SJAG_04498","SJAG_01665","SJAG_01456","SJAG_03564","SJAG_01889","SJAG_02368","SJAG_05290","SJAG_03703","SJAG_00228","SJAG_00773","SJAG_02169","SJAG_03602","SJAG_00807","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88611,89293,91055,92659,92924,94198,96650,98351,101018,101581,105499,106521,117328,118171],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[103800,98748,116302,99320],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A component of the cell division site that contains the mid1, cdr2, wee1, klp8, and blt1 proteins, and is involved in contractile ring localization. Medial cortical node complexes appear as cortical dots in the middle of the cell during interphase, and function to recruit other ring components in early mitosis.","definition_xrefs":["GOC:vw","PMID:19474789","PMID:19959363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00279":null,"SJAG_00773":null,"SJAG_00807":null,"SJAG_01143":null,"SJAG_01456":null,"SJAG_01665":null,"SJAG_01889":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03703":null,"SJAG_04280":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mid1p medial cortical dot","type":"exact"},{"name":"midsome","type":"exact"}],"termid":"GO:0071341","terms_by_termid":{"GO:0071341":null,"GO:0110115":null}}


id: PBO:0049529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ2 pseudogene 1","termid":"PBO:0049529"}


id: GO:0070209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is part of the chromatin remodeling machinery; the acronym stands for ASsembly of Tel, Rvb and Atm-like kinase. In Saccharomyces cerevisiae this complex includes Rvb1p, Rvb2p, Tra1p, Tel2p, Asa1p, Ttilp and Tti2p.","definition_xrefs":["PMID:19040720","GOC:rb","PMID:22505622"],"gene_count":0,"genotype_count":0,"name":"obsolete ASTRA complex (obsolete GO:0070209)","termid":"GO:0070209"}


id: MONDO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder affecting the testis. Representative examples include torsion, infarction, germ cell tumor, sex cord-stromal tumor, lymphoma, and leukemia.","definition_xrefs":["NCIT:C26890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular disorder","secondary_identifiers":["SCTID:64910008","MEDGEN:11743","ICD9:608.89","DOID:2519","MESH:D013733","EFO:0009601","UMLS:C0039584"],"synonyms":[{"name":"disease of testis","type":"exact"},{"name":"disease or disorder of testis","type":"exact"},{"name":"disorder of testis","type":"exact"},{"name":"testicular disease","type":"exact"},{"name":"testicular disorder","type":"exact"},{"name":"testis disease","type":"exact"},{"name":"testis disease or disorder","type":"exact"},{"name":"testis disorder","type":"exact"}],"termid":"MONDO:0002329","xrefs":{"Monarch":{"xref_id":"0002329"}}}


id: MONDO:0957316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermolytic hyperkeratosis (obsolete MONDO:0957316)","termid":"MONDO:0957316","xrefs":{"Monarch":{"xref_id":"0957316"}}}


id: PR:Q9UT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.07","synonyms":[{"name":"Spom972h-SPAC513.07","type":"exact"}],"termid":"PR:Q9UT59"}


id: PBO:0060788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C2","termid":"PBO:0060788"}


id: FYPO:0006707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the movement of calcium ions from the cytosol to the endoplasmic reticulum is decreased.","definition_xrefs":["PomBase:mah","GO:1903515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased calcium ion transport from cytosol to endoplasmic reticulum","synonyms":[{"name":"decreased calcium ion transport from cytosol to ER during vegetative growth","type":"exact"},{"name":"decreased calcium ion transport from cytosol to endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"decreased calcium ion transport from cytosol to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"decreased calcium transport from cytosol to endoplasmic reticulum","type":"exact"},{"name":"reduced calcium ion transport from cytosol to endoplasmic reticulum during vegetative growth","type":"exact"}],"termid":"FYPO:0006707"}


id: PBO:0044633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair 1A","termid":"PBO:0044633"}


id: MONDO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the aortic valve.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve disorder","termid":"MONDO:0002869"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"cardiac ventricle disorder","termid":"MONDO:0045001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve disorder","secondary_identifiers":["NCIT:C78650","UMLS:C1260873","DOID:62","EFO:0009531","ICD9:395","MEDGEN:226776","ICD9:424.1"],"synonyms":[{"name":"aortic valve disease","type":"exact"},{"name":"aortic valve disease or disorder","type":"exact"},{"name":"aortic valve disorder","type":"exact"},{"name":"disease of aortic valve","type":"exact"},{"name":"disease or disorder of aortic valve","type":"exact"},{"name":"disorder of aortic valve","type":"exact"}],"termid":"MONDO:0003803","xrefs":{"Monarch":{"xref_id":"0003803"}}}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: GO:0046622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of organ growth","termid":"GO:0046622"}


id: PATO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001067 absolute strain (obsolete PATO:0001067)","termid":"PATO:0001067"}


id: GO:1990590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF1 and ATF4 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') of the GRP78 (HSPA5) promoter. Involved in the ER stress response pathway.","definition_xrefs":["GOC:bhm","PMID:12871976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"ATF1-ATF4 transcription factor complex","termid":"GO:1990590"}


id: MONDO:0014529
data:
  {"annotated_genes":["SJAG_03120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85751],"is_not":false,"summary":null,"term":"MONDO:0014529"}]},"cv_name":"mondo","definition":"A syndrome that is characterized by delayed development, intellectual disability, abnormal facial and dental findings, and cerebellar hypoplasia and that has material basis in homozygous or compound heterozygous mutation in the BRF1 gene on chromosome 14q32.","definition_xrefs":["DOID:0080898"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"cerebellar-facial-dental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:444072","UMLS:C4015495","MEDGEN:863932","GARD:17761","OMIM:616202"],"synonyms":[{"name":"CEREBELLOFACIODENTAL syndrome","type":"related"},{"name":"CFDS","type":"related"},{"name":"Cerebellofaciodental syndrome","type":"exact"},{"name":"cerebellar-facial-dental syndrome","type":"exact"}],"termid":"MONDO:0014529","terms_by_termid":{"MONDO:0014529":null},"xrefs":{"Monarch":{"xref_id":"0014529"}}}


id: PBO:0048433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta pseudogene 1","termid":"PBO:0048433"}


id: PBO:0073007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 7","termid":"PBO:0073007"}


id: MONDO:0016504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary unilateral adrenal hyperplasia (PUAH) is a surgically-correctable form of primary (hyper) aldosteronism (PA) characterized by renin suppression, unilateral aldosterone hypersecretion, and moderate to severe hypertension secondary to hyperplasia of the adrenal gland.","definition_xrefs":["Orphanet:231580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary aldosteronism","termid":"MONDO:0001422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary unilateral adrenal hyperplasia","secondary_identifiers":["GARD:20620","UMLS:C4274967","SCTID:715868005","MEDGEN:905007","icd11.foundation:1653668765"],"synonyms":[{"name":"PUAH","type":"exact"}],"termid":"MONDO:0016504","xrefs":{"Monarch":{"xref_id":"0016504"}}}


id: PBO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5DC1 pseudogene 2","termid":"PBO:0061559"}


id: PR:Q9P6I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02347","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C1198.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.01","secondary_identifiers":["UniProtKB:Q9P6I8"],"synonyms":[{"name":"Spom972h-ybdR","type":"exact"}],"termid":"PR:Q9P6I8"}


id: PBO:0080658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 2","termid":"PBO:0080658"}


id: GO:1902350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloroquine stimulus.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23922869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to chloroquine","termid":"GO:1902349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chloroquine","termid":"GO:1902350"}


id: PBO:0088189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger protein of unknown function","termid":"PBO:0088189"}


id: GO:1903780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rph","PMID:12967627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"negatively_regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac conduction","synonyms":[{"name":"down regulation of cardiac conduction","type":"exact"},{"name":"down-regulation of cardiac conduction","type":"exact"},{"name":"downregulation of cardiac conduction","type":"exact"},{"name":"inhibition of cardiac conduction","type":"narrow"}],"termid":"GO:1903780"}


id: PBO:0042861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 91","termid":"PBO:0042861"}


id: PBO:0077271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM11 divergent transcript","termid":"PBO:0077271"}


id: PBO:0067288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 371, pseudogene","termid":"PBO:0067288"}


id: FYPO:0004806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cell wall is broken down to a lesser extent than in wild type at the site of cell-cell fusion during mating.","definition_xrefs":["PomBase:mah","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall disassembly at cell fusion site","termid":"FYPO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0000002","FYPO:0004805","FYPO:0005447"],"is_obsolete":false,"name":"incomplete cell wall disassembly at cell fusion site","synonyms":[{"name":"incomplete cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"incomplete cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004806"}


id: GO:0019400
data:
  {"annotated_genes":["SJAG_03609","SJAG_00237","SJAG_04320","SJAG_04048","SJAG_01012","SJAG_04192","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[106820,94316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[72456,78990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[65779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[73022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00409":null,"SJAG_01012":null,"SJAG_03609":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alditol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alditol metabolism","type":"exact"}],"termid":"GO:0019400","terms_by_termid":{"GO:0006062":null,"GO:0006071":null,"GO:0006114":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: MONDO:0957224
data:
  {"annotated_genes":["SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86881],"is_not":false,"summary":null,"term":"MONDO:0957224"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 21 with early respiratory failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841060","DOID:0081353","OMIM:620326","UMLS:C5830424"],"termid":"MONDO:0957224","terms_by_termid":{"MONDO:0957224":null},"xrefs":{"Monarch":{"xref_id":"0957224"}}}


id: PBO:0089126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Aar2","termid":"PBO:0089126"}


id: PBO:0066606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member U","termid":"PBO:0066606"}


id: PBO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wings apart-like homolog Wpl1","termid":"PBO:0003207"}


id: PBO:0087539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form the active complex, Psy4p may provide additional substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; Pph3p and Psy2p localize to foci on meiotic chromosomes; putative homolog of mammalian R3","termid":"PBO:0087539"}


id: GO:1903491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a simvastatin stimulus. Simvastatin is a statin used as a cholesterol-lowering and anti-cardiovascular disease drug.","definition_xrefs":["GOC:sl","GOC:TermGenie","GO_REF:0000071","PMID:23100282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to statin","termid":"GO:0036273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to simvastatin","termid":"GO:1903491"}


id: MONDO:0010760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete XH antigen (obsolete MONDO:0010760)","secondary_identifiers":["UMLS:C3887689","MEDGEN:854528"],"termid":"MONDO:0010760","xrefs":{"Monarch":{"xref_id":"0010760"}}}


id: GO:0015417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + polyamine(out) = ADP + phosphate + polyamine(in).","definition_xrefs":["RHEA:29999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type polyamine transporter activity","secondary_identifiers":["GO:0015595","MetaCyc:3.6.3.31-RXN","EC:7.6.2.11"],"synonyms":[{"name":"ATP-dependent polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled spermidine transmembrane transporter activity","type":"narrow"},{"name":"polyamine ABC transporter","type":"narrow"},{"name":"polyamine porter activity","type":"broad"},{"name":"polyamine-importing ATPase activity","type":"narrow"},{"name":"polyamine-transporting ATPase activity","type":"related"},{"name":"spermidine porter activity","type":"narrow"},{"name":"spermidine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015417"}


id: GO:1990644
data:
  {"annotated_genes":["SJAG_00646","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88349,111995],"is_not":false,"summary":null,"term":"GO:1990644"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that attaches the spindle microtubules to the kinetochore.","definition_xrefs":["PMID:20723757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"microtubule site clamp","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990644","terms_by_termid":{"GO:1990644":null}}


id: RO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between between a receptor and an chemical entity, typically a small molecule or peptide, that carries information between cells or compartments of a cell and which binds the receptor and regulates its effector function.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ligand","termid":"RO:0002019"}


id: SO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region in mRNA where ribosome assembles.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"five_prime_UTR","termid":"SO:0000204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome_entry_site","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:ribosome_binding_site","type":"exact"},{"name":"ribosome entry site","type":"exact"}],"termid":"SO:0000139"}


id: GO:0099183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the vesicular release and reception of brain derived neurotrophic factor (BDNF), that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by BDNF","termid":"GO:0099191"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0099183"}


id: PBO:0064581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B3","termid":"PBO:0064581"}


id: PBO:0063958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 beta","termid":"PBO:0063958"}


id: PBO:0073841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member A1","termid":"PBO:0073841"}


id: GO:0016433
data:
  {"annotated_genes":["SJAG_03713","SJAG_02821","SJAG_03289","SJAG_03016","SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77555],"is_not":false,"summary":null,"term":"GO:0016433"},{"annotations":[68699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[95525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[98730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyladenine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01958":null,"SJAG_02821":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0016433","terms_by_termid":{"GO:0000179":null,"GO:0016433":null,"GO:0052907":null,"GO:0052909":null,"GO:0106142":null}}


id: GO:0100047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates inositol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100047)","termid":"GO:0100047"}


id: FYPO:0001300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oleoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"abnormal oleoyl-CoA ligase activity","synonyms":[{"name":"abnormal oleoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001300"}


id: GO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"inositol hexakisphosphate 6-kinase activity","termid":"GO:0000831"}


id: GO:0019302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-ribose, (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-ribose biosynthetic process","synonyms":[{"name":"D-ribose anabolism","type":"exact"},{"name":"D-ribose biosynthesis","type":"exact"},{"name":"D-ribose formation","type":"exact"},{"name":"D-ribose synthesis","type":"exact"}],"termid":"GO:0019302"}


id: PBO:0056591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MyoD family inhibitor domain containing 2","termid":"PBO:0056591"}


id: GO:0018899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2-dichloroethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:dce"],"synonyms":[{"name":"1,2-dichloroethane metabolism","type":"exact"}],"termid":"GO:0018899"}


id: PBO:0061972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AK member 2","termid":"PBO:0061972"}


id: PBO:0039157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 4","termid":"PBO:0039157"}


id: PR:Q09816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An S-methyl-5'-thioadenosine phosphorylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00309","PANTHER:PTHR11904:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5'-thioadenosine phosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.02c","secondary_identifiers":["UniProtKB:Q09816"],"synonyms":[{"name":"5'-methylthioadenosine phosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTA phosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTAPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTAP","type":"exact"}],"termid":"PR:Q09816"}


id: PBO:0055303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2730","termid":"PBO:0055303"}


id: FYPO:0003333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell is inviable, and grows in the form of a lemon prior to cell death. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable lemon-shaped cell","synonyms":[{"name":"inviable lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"inviable lemon-shaped cell during vegetative growth","type":"exact"},{"name":"inviable lemon-shaped vegetative cell","type":"exact"},{"name":"lethal; lemon-shaped cell","type":"exact"}],"termid":"FYPO:0003333"}


id: PBO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TeTra Spanning protein","termid":"PBO:0004927"}


id: PBO:0036308
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3kb of 36 AA repeat","termid":"PBO:0036308"}


id: GO:0016305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol and phosphatidylinositol-4-phosphate; the human form can phosphorylate phosphatidylinositol-4,5-bisphosphate in the presence of phosphatidylserine.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class II (obsolete GO:0016305)","synonyms":[{"name":"PI3KC2","type":"exact"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"exact"}],"termid":"GO:0016305"}


id: GO:0042250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized embryonic epithelial sheet.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of embryonic epithelium","termid":"GO:0016332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of polarity of embryonic epithelium","termid":"GO:0042250"}


id: PBO:0044952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone)","termid":"PBO:0044952"}


id: PBO:0048189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type B receptor subunit 1","termid":"PBO:0048189"}


id: MONDO:0012787
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86665],"is_not":false,"summary":null,"term":"MONDO:0012787"}]},"cv_name":"mondo","definition":"This syndrome is characterized by progressive spastic paraplegia and distal muscle wasting.","definition_xrefs":["Orphanet:139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 39","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4924","OMIM:612020","DOID:0110790","UMLS:C2677586","MEDGEN:383142","SCTID:719103009","MESH:C567433"],"synonyms":[{"name":"NTE related motor neuron disorder","type":"related"},{"name":"NTE-related motor neuron disorder","type":"exact"},{"name":"NTEMND","type":"exact"},{"name":"PNPLA6 hereditary spastic paraplegia","type":"exact"},{"name":"SPG39","type":"exact"},{"name":"autosomal recessive spastic paraplegia 39","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 39","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in PNPLA6","type":"exact"},{"name":"hereditary spastic paraplegia type 39","type":"exact"},{"name":"spastic paraplegia 39","type":"related"},{"name":"spastic paraplegia 39, autosomal recessive","type":"related"},{"name":"spastic paraplegia due to NTE mutation","type":"exact"},{"name":"spastic paraplegia due to neuropathy target esterase mutation","type":"exact"}],"termid":"MONDO:0012787","terms_by_termid":{"MONDO:0012787":null},"xrefs":{"Monarch":{"xref_id":"0012787"}}}


id: PBO:0054453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1850","termid":"PBO:0054453"}


id: PBO:0041990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 34","termid":"PBO:0041990"}


id: MONDO:0013447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the GUCA1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 48","secondary_identifiers":["MEDGEN:462540","UMLS:C3151190","DOID:0110382","GARD:15720","OMIM:613827","ICD10CM:H35.5"],"synonyms":[{"name":"GUCA1B retinitis pigmentosa","type":"exact"},{"name":"RP48","type":"exact"},{"name":"retinitis pigmentosa 48","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in GUCA1B","type":"exact"},{"name":"retinitis pigmentosa type 48","type":"exact"}],"termid":"MONDO:0013447","xrefs":{"Monarch":{"xref_id":"0013447"}}}


id: MONDO:1012033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachycephalic airway obstruction syndrome, non-human animal","termid":"MONDO:1011924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachycephalic airway obstruction syndrome, domestic cat","secondary_identifiers":["OMIA:000145-9685"],"termid":"MONDO:1012033","xrefs":{"Monarch":{"xref_id":"1012033"}}}


id: PBO:0080589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 13","termid":"PBO:0080589"}


id: PBO:0058874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9986","termid":"PBO:0058874"}


id: PBO:0058307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4680","termid":"PBO:0058307"}


id: PBO:0042552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 15","termid":"PBO:0042552"}


id: GO:2000210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"positively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anoikis","synonyms":[{"name":"positive regulation of detachment induced cell death","type":"exact"},{"name":"positive regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000210"}


id: GO:2001093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a galactotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"galactotriose transport","termid":"GO:2001093"}


