# terms

id: FYPO:0003137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle pole body","synonyms":[{"name":"normal mitotic SPB","type":"exact"},{"name":"normal mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal spindle pole body during mitosis","type":"exact"},{"name":"normal spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003137"}


id: MONDO:0012700
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85558],"is_not":false,"summary":null,"term":"MONDO:0012700"}]},"cv_name":"mondo","definition":"Distal renal tubular acidosis (dRTA) with anemia is a very rare form of distal renal tubular acidosis (dRTA) characterized by a defect in renal acidification and hereditary hemolytic anemia.","definition_xrefs":["Orphanet:93610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"distal renal tubular acidosis","termid":"MONDO:0015827"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005240","MONDO:0002280"],"is_obsolete":false,"name":"renal tubular acidosis, distal, 4, with hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436235","MEDGEN:1771439","GARD:12354","OMIM:611590"],"synonyms":[{"name":"RTA, distal, autosomal recessive, with hemolytic Anaemia","type":"related"},{"name":"RTA, distal, autosomal recessive, with hemolytic Anemia","type":"related"},{"name":"dRTA with anaemia","type":"exact"},{"name":"dRTA with anemia","type":"exact"},{"name":"distal renal tubular acidosis 4 with hemolytic anaemia","type":"exact"},{"name":"distal renal tubular acidosis 4 with hemolytic anemia","type":"exact"},{"name":"distal renal tubular acidosis with anaemia","type":"exact"},{"name":"distal renal tubular acidosis with anemia","type":"exact"},{"name":"renal tubular acidosis, distal, with hemolytic anaemia","type":"related"},{"name":"renal tubular acidosis, distal, with hemolytic anemia","type":"related"},{"name":"renal tubular acidosis, distal, with normal Red cell morphology","type":"related"}],"termid":"MONDO:0012700","terms_by_termid":{"MONDO:0012700":null},"xrefs":{"Monarch":{"xref_id":"0012700"}}}


id: MONDO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, bacterial or viral inflammatory process affecting the larynx. Signs and symptoms include sore throat, cough, swallowing difficulties, and hoarseness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngitis","secondary_identifiers":["MESH:D007827","ICD9:464.00","SCTID:45913009","NCIT:C26811","DOID:3437","MEDGEN:7273","UMLS:C0023067"],"synonyms":[{"name":"inflammation of larynx","type":"exact"},{"name":"laryngeal Inflammation","type":"exact"},{"name":"laryngeal inflammation","type":"exact"},{"name":"larynx inflammation","type":"exact"}],"termid":"MONDO:0002647","xrefs":{"Monarch":{"xref_id":"0002647"}}}


id: GO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2B serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2B receptor binding","type":"exact"},{"name":"type 2B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031827"}


id: PBO:0050527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin protein 1 binding protein 3","termid":"PBO:0050527"}


id: PBO:0057506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 624","termid":"PBO:0057506"}


id: PBO:0055401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2831","termid":"PBO:0055401"}


id: GO:0032552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleotide, any compound consisting of a deoxyribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"deoxyribonucleotide binding","termid":"GO:0032552"}


id: PBO:0029336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation","termid":"PBO:0029336"}


id: PBO:0061473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding protein 2","termid":"PBO:0061473"}


id: MONDO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tonsillar tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"tonsillitis","secondary_identifiers":["UMLS:C0740402","MEDGEN:1781351","ICD9:474.00","ICD10CM:J35.01","SCTID:90979004","NCIT:C116006","MESH:D014069","DOID:10456"],"synonyms":[{"name":"chronic tonsillitis","type":"exact"},{"name":"inflammation of tonsil","type":"exact"},{"name":"throat infection - tonsillitis","type":"exact"},{"name":"tonsil inflammation","type":"exact"},{"name":"tonsilitis","type":"exact"}],"termid":"MONDO:0001039","xrefs":{"Monarch":{"xref_id":"0001039"}}}


id: PBO:0033827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1/Smc1","termid":"PBO:0033827"}


id: MONDO:1011743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular dermatofibrosis and kidney disease, non-human animal","secondary_identifiers":["OMIA:001195"],"termid":"MONDO:1011743","xrefs":{"Monarch":{"xref_id":"1011743"}}}


id: PBO:0083119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Topoisomerase III; conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially; DNA catenation/decatenation activity is stimulated by RPA and Sgs1p-Top3p-Rmi1p; involved in telomere stability and regulation of mitotic recombination","termid":"PBO:0083119"}


id: PBO:0109832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb1 Rvb2","termid":"PBO:0109832"}


id: PBO:0059378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 3","termid":"PBO:0059378"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: GO:0097544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The mid part of a cilium between the ciliary base and ciliary tip that extends into the extracellular space.","definition_xrefs":["PMID:19866682","GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary shaft","synonyms":[{"name":"cilial shaft","type":"exact"},{"name":"cilium shaft","type":"exact"},{"name":"flagellar shaft","type":"exact"},{"name":"flagellum shaft","type":"exact"}],"termid":"GO:0097544"}


id: PR:Q9URV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim11 gene.","definition_xrefs":["UniProtKB:Q9URV6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit e, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.05c","synonyms":[{"name":"ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tim11","type":"exact"},{"name":"translocase of the inner membrane protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URV6"}


id: PBO:0057842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-2","termid":"PBO:0057842"}


id: PBO:0041193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1 mitotic checkpoint serine/threonine kinase pseudogene 1","termid":"PBO:0041193"}


id: PBO:0001820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated RNA-binding protein Sap49","termid":"PBO:0001820"}


id: PBO:0089288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, R3H domain-containing","termid":"PBO:0089288"}


id: PBO:0084025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyoxylate reductase; null mutation results in increased biomass after diauxic shift; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0084025"}


id: GO:0086069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between a bundle of His cell and its surroundings that contributes to the process of the bundle of His cell communicating with a Purkinje myocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte communication","synonyms":[{"name":"atrioventricular junction myocyte to bundle branch myocyte","type":"narrow"},{"name":"bundle branch myocyte to Purkinje myocyte communication","type":"narrow"},{"name":"bundle of His cardiac muscle cell to Purkinje myocyte communication","type":"exact"},{"name":"bundle of His myocyte to atrioventricular junction myocyte","type":"narrow"},{"name":"ventricular conduction system cell to cell communication","type":"exact"}],"termid":"GO:0086069"}


id: PBO:0042057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 120","termid":"PBO:0042057"}


id: MONDO:1011337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurocristopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocristopathy, non-human animal","termid":"MONDO:1011337","xrefs":{"Monarch":{"xref_id":"1011337"}}}


id: MONDO:0003902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioblastoma that involves the brainstem.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial hemangioma","termid":"MONDO:0002328"},{"relation_name":"is_a","term_name":"hemangioblastoma","termid":"MONDO:0016748"},{"relation_name":"is_a","term_name":"benign neoplasm of brain stem","termid":"MONDO:0021507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain stem hemangioblastoma","secondary_identifiers":["NCIT:C5147","DOID:6501","UMLS:C1332611","MEDGEN:231461"],"synonyms":[{"name":"angioblastoma of brain stem","type":"exact"},{"name":"angioblastoma of brainstem","type":"exact"},{"name":"angioblastoma of the brain stem","type":"exact"},{"name":"angioblastoma of the brainstem","type":"exact"},{"name":"brain stem angioblastoma","type":"exact"},{"name":"brain stem capillary hemangioblastoma","type":"exact"},{"name":"brain stem hemangioblastoma","type":"exact"},{"name":"brainstem angioblastoma","type":"exact"},{"name":"brainstem hemangioblastoma","type":"exact"},{"name":"hemangioblastoma of brain stem","type":"exact"},{"name":"hemangioblastoma of brainstem","type":"exact"},{"name":"hemangioblastoma of the brain stem","type":"exact"},{"name":"hemangioblastoma of the brainstem","type":"exact"}],"termid":"MONDO:0003902","xrefs":{"Monarch":{"xref_id":"0003902"}}}


id: PBO:0035901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035901"}


id: GO:0004945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An angiotensin receptor activity that acts via Gi protein coupling and cGMP (NO) generation, and may also act via additional signaling mechanisms.","definition_xrefs":["GOC:mah","PMID:10977869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor activity","termid":"GO:0001595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"angiotensin type II receptor activity","termid":"GO:0004945"}


id: MONDO:0007953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental anomaly, affecting primarily the anterior part of the maxilla and nasal complex.","definition_xrefs":["Orphanet:1248"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"nasal cavity disorder","termid":"MONDO:0002232"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binder syndrome","secondary_identifiers":["MESH:C536036","DOID:14683","GARD:6992","SCTID:715985008","OMIM:155050","MEDGEN:66318","UMLS:C0220692"],"synonyms":[{"name":"Binder syndrome","type":"exact"},{"name":"MAXILLONASAL dysplasia, BINDER type","type":"related"},{"name":"Maxillonasal dysostosis","type":"exact"},{"name":"binder syndrome","type":"exact"},{"name":"binder type maxillonasal dysplasia","type":"exact"},{"name":"maxillonasal dysplasia","type":"related"}],"termid":"MONDO:0007953","xrefs":{"Monarch":{"xref_id":"0007953"}}}


id: GO:1905591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of optical nerve axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16699509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"regulates","term_name":"optical nerve axon regeneration","termid":"GO:0101027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of optical nerve axon regeneration","termid":"GO:1905591"}


id: FYPO:0006800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is decreased during interphase of the mitotic cell cycle. Centromere-kinetochore complexes normally cluster near the old spindle pole body during mitotic interphase.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased centromere clustering at nuclear periphery during mitotic interphase","synonyms":[{"name":"centromere declustering during mitotic interphase","type":"exact"},{"name":"decreased centromere clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased centromere clustering at nuclear periphery during interphase during vegetative growth","type":"exact"},{"name":"decreased centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"related"},{"name":"decreased centromere clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased centromere-SPB clustering during mitotic interphase","type":"related"},{"name":"decreased inter-centromere connection during mitotic interphase","type":"exact"},{"name":"decreased kinetochore clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at old mitotic spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore localization at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased mitotic centromere clustering at nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0006800"}


id: MONDO:1011110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in puma.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, puma","secondary_identifiers":["OMIA:000243-9696"],"termid":"MONDO:1011110","xrefs":{"Monarch":{"xref_id":"1011110"}}}


id: PBO:0047153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member D, pseudogene","termid":"PBO:0047153"}


id: GO:0036289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own serine amino acid residues, or a serine residue on an identical protein.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine autophosphorylation","synonyms":[{"name":"serine autophosphorylation","type":"exact"}],"termid":"GO:0036289"}


id: GO:0019120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid halide bond in substances containing halogen atoms in organic linkage.","definition_xrefs":["EC:3.8.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds","termid":"GO:0016824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}


id: PBO:0014252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1-driven selective elimination factor Iss10","termid":"PBO:0014252"}


id: MONDO:0011606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"achondroplasia","termid":"MONDO:0007037"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baby rattle pelvis dysplasia","secondary_identifiers":["UMLS:C1853911","MESH:C565282","MESH:C537794","MEDGEN:340083","OMIM:605838","GARD:9289"],"synonyms":[{"name":"baby rattle pelvic dysplasia","type":"exact"},{"name":"baby rattle pelvis dysplasia","type":"exact"}],"termid":"MONDO:0011606","xrefs":{"Monarch":{"xref_id":"0011606"}}}


id: PBO:0066743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 40","termid":"PBO:0066743"}


id: PBO:0064109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD1 antisense RNA 1","termid":"PBO:0064109"}


id: PBO:0044027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 1","termid":"PBO:0044027"}


id: PBO:0085186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two isoforms of the gamma subunit of eEF1B; stimulates the release of GDP from eEF1A (Tef1p/Tef2p) post association with the ribosomal complex with eEF1Balpha subunit; nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other nuclear factors; binds calcium and phospholipids","termid":"PBO:0085186"}


id: PBO:0114750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin unloading complex subunit Pds5","termid":"PBO:0114750"}


id: GO:1901242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + doxorubicin(in) = ADP + phosphate + doxorubicin(out).","definition_xrefs":["PMID:12057006","GOC:TermGenie","PMID:15090538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type doxorubicin transporter activity","secondary_identifiers":["TC:3.A.1.105.1"],"synonyms":[{"name":"ATPase-coupled doxorubicin transmembrane transporter activity","type":"related"},{"name":"doxorubicin transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901242"}


id: FYPO:0006974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular triglyceride level during vegetative growth","termid":"FYPO:0005585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"triglyceride absent from cell","synonyms":[{"name":"TAG absent from cell","type":"exact"},{"name":"triacylglycerol absent from cell","type":"exact"},{"name":"triglyceride absent from cell during mitotic cell cycle","type":"related"},{"name":"triglyceride absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0006974"}


id: PBO:0028975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nitrite","termid":"PBO:0028975"}


id: PBO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.2","termid":"PBO:0000837"}


id: PBO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase","termid":"PBO:0045047"}


id: PBO:0011971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein Seg1","termid":"PBO:0011971"}


id: PBO:0043971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 1","termid":"PBO:0043971"}


id: GO:0098992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.","definition_xrefs":["GOC:dos","Wikipedia:Neuropeptide&oldid=713905176","ISBN:978-0-07-181001-2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"neuronal dense core vesicle","termid":"GO:0098992"}


id: MONDO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the supraglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:C3545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"supraglottis neoplasm","termid":"MONDO:0004427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis cancer","secondary_identifiers":["DOID:13476","ICD10CM:C32.1","ICD9:161.1","MEDGEN:57561","SCTID:187842004","UMLS:C0153484"],"synonyms":[{"name":"Ca larynx - supraglottis","type":"exact"},{"name":"cancer of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of extrinsic larynx","type":"exact"},{"name":"malignant neoplasm of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of supraglottis","type":"exact"},{"name":"malignant neoplasm of the supraglottis","type":"exact"},{"name":"malignant supraglottic neoplasm","type":"exact"},{"name":"malignant supraglottic part of larynx neoplasm","type":"exact"},{"name":"malignant supraglottic tumor","type":"exact"},{"name":"malignant supraglottic tumour","type":"exact"},{"name":"malignant supraglottis neoplasm","type":"exact"},{"name":"malignant supraglottis tumor","type":"exact"},{"name":"malignant supraglottis tumour","type":"exact"},{"name":"malignant tumor of supraglottis","type":"exact"},{"name":"malignant tumor of the supraglottis","type":"exact"},{"name":"malignant tumour of supraglottis","type":"exact"},{"name":"malignant tumour of the supraglottis","type":"exact"},{"name":"supraglottic part of larynx cancer","type":"exact"}],"termid":"MONDO:0001724","xrefs":{"Monarch":{"xref_id":"0001724"}}}


id: PBO:0079060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 1-1","termid":"PBO:0079060"}


id: PBO:0053273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A6","termid":"PBO:0053273"}


id: PBO:0011403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extension_relations_status","termid":"PBO:0011403"}


id: PBO:0114219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, RNA-binding Cxr1","termid":"PBO:0114219"}


id: GO:0103102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 8-methylthiooctylhydroximate = H+ + 7-methylthioheptyldesulfoglucosinolate + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity (obsolete GO:0103102)","termid":"GO:0103102"}


id: GO:0051180
data:
  {"annotated_genes":["SJAG_02780","SJAG_05175","SJAG_02962","SJAG_02779","SJAG_00835","SJAG_03652","SJAG_03503","SJAG_02152","SJAG_04673","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79601,72146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[61893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015884"},{"annotations":[103954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[72857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[117770,90478,90477,119050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[90479,90480,117771,119051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[90481,90482,119052,117772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[101000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[90484,90483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of vitamins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02152":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vitamin transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"vitamin or cofactor transport","type":"broad"}],"termid":"GO:0051180","terms_by_termid":{"GO:0015884":null,"GO:0071934":null,"GO:0098717":null,"GO:0140125":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1905135":null,"GO:1990545":null}}


id: PBO:0055987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRTM4 antisense RNA 1","termid":"PBO:0055987"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["KEGG_REACTION:R00661","MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: MONDO:0032812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 78","secondary_identifiers":["GARD:16365","DOID:0112214","MEDGEN:1684724","UMLS:C5231409","OMIM:618557"],"synonyms":[{"name":"DEE78","type":"exact"},{"name":"EIEE78","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 78","type":"exact"},{"name":"developmental and epileptic encephalopathy 78","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 78","type":"exact"}],"termid":"MONDO:0032812","xrefs":{"Monarch":{"xref_id":"0032812"}}}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: GO:1904797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of core promoter binding.","definition_xrefs":["PMID:22723415","GOC:BHF","GO_REF:0000059","GOC:nc","GOC:BHF_telomere","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of core promoter binding","synonyms":[{"name":"down regulation of core promoter binding","type":"exact"},{"name":"down-regulation of core promoter binding","type":"exact"},{"name":"downregulation of core promoter binding","type":"exact"},{"name":"inhibition of core promoter binding","type":"narrow"}],"termid":"GO:1904797"}


id: FYPO:0002054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to hydroxyurea. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to hydroxyurea (obsolete FYPO:0002054)","synonyms":[{"name":"cut during cellular response to HU","type":"exact"},{"name":"cut during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002054"}


id: GO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythro-3-methylmalyl-CoA = mesaconyl-CoA + H2O.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-erythro-3-methylmalyl-CoA dehydratase activity","termid":"GO:0043960"}


id: PBO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial morphology and distribution","termid":"PBO:0002611"}


id: GO:0034883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + 2 H+ + 2 e- = 1,4-dihydroisonicotinate.","definition_xrefs":["UM-BBD_reactionID:r1347"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate reductase activity (obsolete GO:0034883)","synonyms":[{"name":"isonicotinate reductase activity","type":"exact"}],"termid":"GO:0034883"}


id: MONDO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal disorder characterized by an opening in the anal canal to the perianal skin. In the vast majority of cases there is a history of perianal abscess.","definition_xrefs":["NCIT:C60785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"},{"relation_name":"is_a","term_name":"intestinal fistula","termid":"MONDO:1040017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anal fistula","secondary_identifiers":["SCTID:72779005","icd11.foundation:206903882","UMLS:C0205929","MEDGEN:61482","Orphanet:228113","HP:0010447","ICD10CM:K60.3","DOID:0060328","GARD:20568","MESH:D012003"],"synonyms":[{"name":"anal fistula","type":"exact"},{"name":"anal fistula (disease)","type":"exact"},{"name":"anorectal fistula","type":"exact"}],"termid":"MONDO:0000754","xrefs":{"Monarch":{"xref_id":"0000754"}}}


id: MONDO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyelitis","termid":"MONDO:0006938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyeloureteritis cystica","secondary_identifiers":["DOID:2743","SCTID:37779008","UMLS:C0156254","MEDGEN:510216","ICD10CM:N28.85","ICD9:590.3"],"termid":"MONDO:0002410","xrefs":{"Monarch":{"xref_id":"0002410"}}}


id: MONDO:0008133
data:
  {"annotated_genes":["SJAG_02641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85821],"is_not":false,"summary":null,"term":"MONDO:0008133"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426","MONDO:0005328","MONDO:0004069","MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:165300","Orphanet:67036","MEDGEN:371657","DOID:0111433","GARD:10203","SCTID:719517009","UMLS:C1833809","MESH:C537128"],"synonyms":[{"name":"OPA3","type":"related"},{"name":"OPA3, autosomal dominant","type":"exact"},{"name":"autosomal dominant optic atrophy type 3","type":"exact"},{"name":"optic atrophy 3","type":"exact"},{"name":"optic atrophy 3 with cataract","type":"related"},{"name":"optic atrophy 3, autosomal dominant","type":"related"},{"name":"optic atrophy and cataract, autosomal dominant","type":"related"},{"name":"optic atrophy, cataract, and neurologic disorder","type":"related"}],"termid":"MONDO:0008133","terms_by_termid":{"MONDO:0008133":null},"xrefs":{"Monarch":{"xref_id":"0008133"}}}


id: GO:1905298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal epithelial cell development.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","PMID:23904268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal epithelial cell development","termid":"GO:1905298"}


id: PBO:0091355
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear Tos4 is a marker for early S phase","termid":"PBO:0091355"}


id: GO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated phagocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated endocytic vesicle membrane","termid":"GO:0030669"},{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"clathrin-coated phagocytic vesicle","termid":"GO:0045336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-coated phagocytic vesicle membrane","termid":"GO:0030671"}


id: MONDO:0021056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any attenuated familial adenomatous polyposis in which the cause of the disease is a mutation in the APC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis 1","secondary_identifiers":["MEDGEN:398651","OMIM:175100","DOID:0080409","UMLS:C2713442"],"synonyms":[{"name":"APC attenuated familial adenomatous polyposis","type":"exact"},{"name":"FAP1","type":"exact"},{"name":"Gardner syndrome","type":"related"},{"name":"adenoma, periampullary, somatic","type":"exact"},{"name":"adenomatous polyposis coli","type":"broad"},{"name":"adenomatous polyposis coli, attenuated","type":"related"},{"name":"adenomatous polyposis of the colon","type":"related"},{"name":"attenuated familial adenomatous polyposis caused by mutation in APC","type":"exact"},{"name":"brain tumor-polyposis syndrome 2","type":"related"},{"name":"familial adenomatous polyposis 1","type":"exact"},{"name":"familial adenomatous polyposis, attenuated","type":"related"},{"name":"familial polyposis of the colon","type":"related"},{"name":"polyposis, adenomatous intestinal","type":"related"}],"termid":"MONDO:0021056","xrefs":{"Monarch":{"xref_id":"0021056"}}}


id: PBO:0030489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_succinate_import","termid":"PBO:0030489"}


id: PBO:0063149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 2","termid":"PBO:0063149"}


id: PBO:0071215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 56","termid":"PBO:0071215"}


id: PBO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvyltransferase Pvg1","termid":"PBO:0001781"}


id: GO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010749"}


id: MOD:01000
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tyrosine residue with one bromine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated tyrosine","termid":"MOD:00988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated tyrosine","synonyms":[{"name":"Br1Tyr","type":"exact"}],"termid":"MOD:01000"}


id: PR:000037486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc2 gene or a 1:1 ortholog thereof.","definition_xrefs":["UniProtKB:P04551","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal-type cyclin-dependent kinase 1","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cell division control protein 2","type":"exact"},{"name":"Cell division protein kinase 1","type":"exact"},{"name":"cdc2","type":"exact"},{"name":"p34 protein kinase","type":"exact"}],"termid":"PR:000037486"}


id: PBO:0116638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF guanine nucleotide exchange factor 1","termid":"PBO:0116638"}


id: MONDO:0015555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"plaque-form urticaria pigmentosa","secondary_identifiers":["MEDGEN:1843438","GARD:20034","Orphanet:158769","UMLS:C5680682"],"termid":"MONDO:0015555","xrefs":{"Monarch":{"xref_id":"0015555"}}}


id: PBO:0027134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027134"}


id: PBO:0052652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 20","termid":"PBO:0052652"}


id: MONDO:0008483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stutter disorder","termid":"MONDO:0000723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stuttering, familial persistent, 1","secondary_identifiers":["OMIM:184450","MEDGEN:483580","UMLS:C3489627"],"synonyms":[{"name":"STUT1","type":"exact"},{"name":"stammering","type":"related"},{"name":"stuttering, familial persistent, 1","type":"exact"}],"termid":"MONDO:0008483","xrefs":{"Monarch":{"xref_id":"0008483"}}}


id: PBO:0041943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 4","termid":"PBO:0041943"}


id: PBO:0057305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 515-2","termid":"PBO:0057305"}


id: PBO:0045386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 8","termid":"PBO:0045386"}


id: MONDO:0030994
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85925],"is_not":false,"summary":null,"term":"MONDO:0030994"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without autism or seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1784023","GARD:18540","UMLS:C5543225","OMIM:619239"],"synonyms":[{"name":"NEDAUS","type":"exact"},{"name":"neurodevelopmental disorder with or without autism or seizures","type":"exact"}],"termid":"MONDO:0030994","terms_by_termid":{"MONDO:0030994":null},"xrefs":{"Monarch":{"xref_id":"0030994"}}}


id: GO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactarate, the anion of galactaric acid.","definition_xrefs":["ISBN:0198506732","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid biosynthetic process","termid":"GO:0019578"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactarate biosynthetic process","secondary_identifiers":["GO:0042872"],"synonyms":[{"name":"D-galactarate anabolism","type":"related"},{"name":"D-galactarate biosynthesis","type":"related"},{"name":"D-galactarate biosynthetic process","type":"related"},{"name":"D-galactarate formation","type":"related"},{"name":"D-galactarate synthesis","type":"related"},{"name":"galactarate anabolism","type":"exact"},{"name":"galactarate biosynthesis","type":"exact"},{"name":"galactarate formation","type":"exact"},{"name":"galactarate synthesis","type":"exact"}],"termid":"GO:0046357"}


id: PBO:0080411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS39 subunit of HOPS complex","termid":"PBO:0080411"}


id: GO:0051218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of tungsten into a protein via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide).","definition_xrefs":["PDB:1HOH","PMID:12220497","RESID:AA0376"],"gene_count":0,"genotype_count":0,"name":"obsolete tungsten incorporation via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide) (obsolete GO:0051218)","termid":"GO:0051218"}


id: GO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"desmosome assembly","termid":"GO:0002159"}


id: GO:0008282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises four pore-forming (Kir6.x) and four regulatory sulphonylurea receptor (SURx) subunits and forms a transmembrane channel through which ions may pass. The opening and closing of the channel is regulated by ATP: binding of ATP to the Kir6.x subunit inhibits channel activity, whereas binding of Mg2+-complexed ATP or ADP to the SURx subunit stimulates channel activity.","definition_xrefs":["GOC:bhm","PMID:16308567","PMID:16956886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"inward rectifying potassium channel","synonyms":[{"name":"ATP-sensitive potassium channel complex","type":"exact"},{"name":"KCNJ11-SUR complex","type":"related"},{"name":"KCNJ11-SURx complex","type":"related"},{"name":"KCNJ8-SUR complex","type":"related"},{"name":"KCNJ8-SURx complex","type":"related"},{"name":"Kir6-SUR complex","type":"related"},{"name":"Kir6.1-SUR complex","type":"related"},{"name":"Kir6.1-SURx complex","type":"related"},{"name":"Kir6.2-SUR complex","type":"related"},{"name":"Kir6.2-SURx complex","type":"related"},{"name":"Kir6.x complex","type":"related"},{"name":"Kir6.x-SURx complex","type":"related"},{"name":"inward rectifying K+ channel","type":"exact"}],"termid":"GO:0008282"}


id: GO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:go_curators","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acid chemical","synonyms":[{"name":"response to acid","type":"broad"},{"name":"response to acid anion","type":"related"},{"name":"response to oxoanion","type":"related"}],"termid":"GO:0001101"}


id: PBO:0065441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 2","termid":"PBO:0065441"}


id: GO:0006918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of apoptosis by p53 (obsolete GO:0006918)","synonyms":[{"name":"induction of apoptosis by p53","type":"exact"}],"termid":"GO:0006918"}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: PBO:0075805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 4, pseudogene","termid":"PBO:0075805"}


id: PATO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's sensitivity towards a fixed location or value where a change is observed; upper limit.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threshold","termid":"PATO:0000152"}


id: SO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an anticlockwise, left handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, +80 degrees psi +120 degrees < +180 degrees, residue(i+1): +20 degrees < phi < +140 degrees, -40 < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_left_handed_type_two","secondary_identifiers":["BS:00232"],"synonyms":[{"name":"st turn left handed type two","type":"exact"},{"name":"st_turn_iil","type":"exact"}],"termid":"SO:0001143"}


id: PR:P55877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P55877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.07","synonyms":[{"name":"Spom972h-tif11","type":"exact"},{"name":"eIF-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 4C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P55877"}


id: PBO:0061617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 3","termid":"PBO:0061617"}


id: PBO:0038313
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_name","termid":"PBO:0038313"}


id: GO:0019584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactonate, the anion of galactonic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"galactonate catabolic process","synonyms":[{"name":"galactonate breakdown","type":"exact"},{"name":"galactonate catabolism","type":"exact"},{"name":"galactonate degradation","type":"exact"}],"termid":"GO:0019584"}


id: PBO:0059808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 34","termid":"PBO:0059808"}


id: GO:0045744
data:
  {"annotated_genes":["SJAG_02311","SJAG_01245","SJAG_02426","SJAG_00266","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100762,108284,116682,93091,92426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"down-regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"downregulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"inhibition of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"negative regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signaling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0045744","terms_by_termid":{"GO:0110034":null}}


id: GO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the level of any of the various angiotensinogen proteolytic products in the blood. This occurs by the proteolytic cleavage of angiotensinogen, and its proteolytic products, to create a variety of active peptide hormones, such as angiotensin I and angiotensin II, as well as through the removal of these peptides from the circulation.","definition_xrefs":["GOC:rl","PMID:21951628","Wikipedia:Angiotensin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","termid":"GO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiotensin levels in blood","synonyms":[{"name":"control of angiotensin levels in blood","type":"related"},{"name":"control of blood angiotensin level","type":"related"},{"name":"regulation of blood angiotensin level","type":"exact"}],"termid":"GO:0002002"}


id: MONDO:0016437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset focal dermal elastosis is a rare, acquired, dermis elastic tissue disorder characterized by a pseudoxanthoma elasticum-like papular eruption consisting of multiple, slowly progressive, asymptomatic, 2-5 mm, white to yellowish, non-follicular papules (that tend to form cobblestone plaques) predominantly distributed over the neck, axillae and flexural areas, with no systemic involvement. Skin biopsy reveals a focal increase of normal-appearing elastic tissue in the reticular dermis with no calcium deposits.","definition_xrefs":["Orphanet:228227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late-onset focal dermal elastosis","secondary_identifiers":["MEDGEN:1658281","GARD:20578","UMLS:C4751167"],"synonyms":[{"name":"PXE-like late-onset focal dermal elastosis","type":"exact"},{"name":"pseudoxanthoma-like late-onset focal dermal elastosis","type":"exact"}],"termid":"MONDO:0016437","xrefs":{"Monarch":{"xref_id":"0016437"}}}


id: PBO:0017934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA transmembrane transporter (predicted)","termid":"PBO:0017934"}


id: MONDO:0013420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the CX3CR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 12","secondary_identifiers":["MEDGEN:462429","OMIM:613784","DOID:0110024","UMLS:C3151079"],"synonyms":[{"name":"ARMD12","type":"exact"},{"name":"CX3CR1 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 12","type":"exact"},{"name":"age-related macular degeneration caused by mutation in CX3CR1","type":"exact"},{"name":"macular Degeneration, age-related, type 12","type":"exact"},{"name":"macular degeneration, age-related, 12","type":"related"}],"termid":"MONDO:0013420","xrefs":{"Monarch":{"xref_id":"0013420"}}}


id: GO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates the increase in its size or mass within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of growth of symbiont in host (obsolete GO:0044126)","termid":"GO:0044126"}


id: FYPO:0000060
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119507],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mononucleate during vegetative growth","type":"exact"},{"name":"mononucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000060","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32 (predicted)","termid":"PBO:0004716"}


id: PBO:0082223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in intracellular amino acid permease sorting, functions in heat shock element mediated gene expression, essential for growth in stress conditions; BUL2 has a paralog, BUL1, that arose from the whole genome duplication","termid":"PBO:0082223"}


id: PBO:0091964
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously curated onto incorrect strand","termid":"PBO:0091964"}


id: PBO:0040430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting alpha","termid":"PBO:0040430"}


id: MONDO:0024570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated hyperparathyroidism in which the cause of the disease is a mutation in the GCM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated hyperparathyroidism","termid":"MONDO:0015027"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism 4","secondary_identifiers":["UMLS:C4479229","GARD:18256","MEDGEN:1386327","OMIM:617343"],"synonyms":[{"name":"GCM2 familial isolated hyperparathyroidism","type":"exact"},{"name":"HRPT4","type":"related"},{"name":"familial isolated hyperparathyroidism caused by mutation in GCM2","type":"exact"},{"name":"hyperparathyroidism 4","type":"exact"},{"name":"hyperparathyroidism type 4","type":"exact"}],"termid":"MONDO:0024570","xrefs":{"Monarch":{"xref_id":"0024570"}}}


id: GO:0004726
data:
  {"annotated_genes":["SJAG_01667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63153],"is_not":false,"summary":null,"term":"GO:0004726"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: non-membrane spanning protein tyrosine phosphate + H2O = non-membrane spanning protein tyrosine + phosphate.","definition_xrefs":["PMID:34353440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0140096","GO:0016788","GO:0004721"],"is_obsolete":false,"name":"non-membrane spanning protein tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-177924","Reactome:R-HSA-177926","Reactome:R-HSA-9635739","Reactome:R-HSA-177935","Reactome:R-HSA-177923"],"termid":"GO:0004726","terms_by_termid":{"GO:0004726":null}}


id: FYPO:0006225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tetramethylammonium. Cells stop growing (and may die) at a concentration of tetramethylammonium that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to tetramethylammonium","synonyms":[{"name":"hypersensitive to tetramethylammonium","type":"exact"},{"name":"sensitive to TMA","type":"exact"},{"name":"sensitive to tetramethylammonium during mitotic cell cycle","type":"related"},{"name":"sensitive to tetramethylammonium during vegetative growth","type":"exact"}],"termid":"FYPO:0006225"}


id: SO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice site where the donor and acceptor sites differ from the canonical form.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000674 non_canonical_splice_site (obsolete SO:0000674)","synonyms":[{"name":"non canonical splice site","type":"exact"},{"name":"non-canonical splice site","type":"exact"}],"termid":"SO:0000674"}


id: GO:0015129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactate from one side of a membrane to the other. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"lactate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-373875","Reactome:R-HSA-373867"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015129"}


id: GO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"negative regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of GABA reuptake","type":"exact"},{"name":"negative regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051949"}


id: MONDO:0007212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly - long thumb syndrome is a very rare autosomal dominant heart-hand syndrome that is characterized by bisymmetric brachydactyly accompanied by long thumbs, joint anomalies (restriction of motion at the shoulder and metacarpophalangeal joints) and cardiac conduction defects. Additional features include small hands and feet, clinodactyly, narrow shoulders with short clavicles, pectus excavatum and mild shortness of the limbs, cardiomegaly and murmur of pulmonic stenosis.It has been described in four family members from three generations, with no new cases having been reported since 1981.","definition_xrefs":["Orphanet:2946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactyly-long thumb syndrome","secondary_identifiers":["UMLS:C1862169","MEDGEN:350609","MESH:C566204","OMIM:112430","SCTID:733454004","GARD:968"],"synonyms":[{"name":"brachydactyly long thumb type","type":"related"},{"name":"brachydactyly, long thumb type","type":"exact"},{"name":"brachydactyly, long-thumb type","type":"related"},{"name":"long-thumb brachydactyly syndrome","type":"related"}],"termid":"MONDO:0007212","xrefs":{"Monarch":{"xref_id":"0007212"}}}


id: PBO:0066723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 20","termid":"PBO:0066723"}


id: PBO:0062610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily T member 1 pseudogene","termid":"PBO:0062610"}


id: PBO:0088443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit, centractin family actin-like protein Arp1","termid":"PBO:0088443"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108615],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: MONDO:1011722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome B-related exercise intolerance, non-human animal","secondary_identifiers":["OMIA:002407"],"termid":"MONDO:1011722","xrefs":{"Monarch":{"xref_id":"1011722"}}}


id: PBO:0068028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 333","termid":"PBO:0068028"}


id: PBO:0071627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 46","termid":"PBO:0071627"}


id: PBO:0088184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication","termid":"PBO:0088184"}


id: GO:0034079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["MetaCyc:P125-PWY","ISBN:0911910123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"},{"relation_name":"is_a","term_name":"glycol biosynthetic process","termid":"GO:0042845"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butanediol biosynthetic process","synonyms":[{"name":"butanediol anabolism","type":"exact"},{"name":"butanediol biosynthesis","type":"exact"},{"name":"butanediol formation","type":"exact"},{"name":"butanediol synthesis","type":"exact"},{"name":"butylene glycol biosynthesis","type":"exact"},{"name":"butylene glycol biosynthetic process","type":"exact"}],"termid":"GO:0034079"}


id: PBO:0051204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-4","termid":"PBO:0051204"}


id: GO:0141081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or stops an inflammasome-mediated signal transduction pathway in the host organism by interfering with its normal execution. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:36227980","PMID:26687278","PMID:29061850","PMID:27214553","PMID:34324582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host inflammasome-mediated signal transduction","synonyms":[{"name":"perturbation of host inflammasome-mediated signal transduction","type":"broad"}],"termid":"GO:0141081"}


id: MONDO:0033370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 61","secondary_identifiers":["OMIM:617933","DOID:0080434","MEDGEN:1639392","UMLS:C4693688"],"synonyms":[{"name":"DEE61","type":"exact"},{"name":"EIEE61","type":"exact"},{"name":"developmental and epileptic encephalopathy 61","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 61","type":"exact"}],"termid":"MONDO:0033370","xrefs":{"Monarch":{"xref_id":"0033370"}}}


id: PBO:0087895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes; STP2 has a paralog, STP1, that arose from the whole genome duplication","termid":"PBO:0087895"}


id: GO:1902176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:11672522","GOC:TermGenie","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902176"}


id: MONDO:0012025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchiootic syndrome in which the cause of the disease is a mutation in the SIX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiootic syndrome","termid":"MONDO:0018878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiootic syndrome 3","secondary_identifiers":["GARD:15430","MEDGEN:333995","MESH:C564248","OMIM:608389","UMLS:C1842124"],"synonyms":[{"name":"BOS3","type":"related"},{"name":"SIX1 branchiootic syndrome","type":"exact"},{"name":"bo syndrome 3","type":"related"},{"name":"branchiootic syndrome 3","type":"exact"},{"name":"branchiootic syndrome caused by mutation in SIX1","type":"exact"},{"name":"branchiootic syndrome type 3","type":"exact"}],"termid":"MONDO:0012025","xrefs":{"Monarch":{"xref_id":"0012025"}}}


id: MONDO:0006417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that arises from the small intestine.","definition_xrefs":["NCIT:C96055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"small intestine lymphoma","termid":"MONDO:0001852"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"small intestinal diffuse large B-cell lymphoma","secondary_identifiers":["MEDGEN:474155","EFO:1000534","UMLS:C3272522"],"synonyms":[{"name":"diffuse large B-cell lymphoma of small intestine","type":"exact"},{"name":"small intestinal diffuse large B-cell lymphoma","type":"exact"},{"name":"small intestine diffuse large B-cell lymphoma","type":"exact"}],"termid":"MONDO:0006417","xrefs":{"Monarch":{"xref_id":"0006417"}}}


id: GO:1904440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18353247","GOC:BHF","GOC:kom"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of iron ion transmembrane transport","termid":"GO:0034761"},{"relation_name":"is_a","term_name":"regulation of iron ion import across plasma membrane","termid":"GO:1904438"},{"relation_name":"positively_regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0098771"},{"rel_name":"regulates","termid":"GO:0098771"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903991"],"synonyms":[{"name":"activation of ferrous ion import into cell","type":"narrow"},{"name":"activation of ferrous iron import across plasma membrane","type":"narrow"},{"name":"positive regulation of ferrous ion import into cell","type":"related"},{"name":"positive regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"positive regulation of ferrous iron import into cell","type":"related"},{"name":"up regulation of ferrous ion import into cell","type":"related"},{"name":"up regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"up-regulation of ferrous ion import into cell","type":"related"},{"name":"up-regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"upregulation of ferrous ion import into cell","type":"related"},{"name":"upregulation of ferrous iron import across plasma membrane","type":"related"}],"termid":"GO:1904440"}


id: MONDO:0014842
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85980],"is_not":false,"summary":null,"term":"MONDO:0014842"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the TBL1XR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 41","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616944","UMLS:C4310784","MEDGEN:934751","DOID:0070071"],"synonyms":[{"name":"MRD41","type":"exact"},{"name":"TBL1XR1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant intellectual disability 41","type":"exact"},{"name":"autosomal dominant mental retardation 41","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 41","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in TBL1XR1","type":"exact"},{"name":"intellectual disability, autosomal dominant 41","type":"exact"},{"name":"intellectual disability, autosomal dominant type 41","type":"exact"},{"name":"mental retardation, autosomal dominant 41","type":"exact"},{"name":"mental retardation, autosomal dominant type 41","type":"exact"}],"termid":"MONDO:0014842","terms_by_termid":{"MONDO:0014842":null},"xrefs":{"Monarch":{"xref_id":"0014842"}}}


id: MONDO:0010759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wildervanck syndrome is characterized by the triad of cervical vertebral fusion (Klippel-Feil anomaly), bilateral abducens palsy with retracted eyes (Duane syndrome) and congenital perceptive deafness.","definition_xrefs":["Orphanet:3456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wildervanck syndrome","secondary_identifiers":["SCTID:79665007","MEDGEN:120518","MedDRA:10069402","OMIM:314600","UMLS:C0265239","NORD:1853","GARD:5569","ICD9:759.89"],"synonyms":[{"name":"COA syndrome","type":"related"},{"name":"Cervicooculoacoustic syndrome","type":"exact"},{"name":"Wildervanck syndrome","type":"exact"},{"name":"cervico-oculo-acoustic dysplasia","type":"related"},{"name":"cervico-oculo-acoustic syndrome","type":"related"}],"termid":"MONDO:0010759","xrefs":{"Monarch":{"xref_id":"0010759"}}}


id: GO:1905039
data:
  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id: MONDO:0859223
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  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87444],"is_not":false,"summary":null,"term":"MONDO:0859223"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type Iw, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5562068","OMIM:619714","MEDGEN:1794278"],"termid":"MONDO:0859223","terms_by_termid":{"MONDO:0859223":null},"xrefs":{"Monarch":{"xref_id":"0859223"}}}


id: PBO:0028618
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U1_snRNP_binding","termid":"PBO:0028618"}


id: MONDO:0005457
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute stress reaction (obsolete MONDO:0005457)","termid":"MONDO:0005457","xrefs":{"Monarch":{"xref_id":"0005457"}}}


id: MONDO:0015664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary artery dilatation is a rare developmental defect during embryogenesis characterized by the dilatation of the main pulmonary artery, with or without dilatation of the right and left pulmonary artery branches, and not attributed to any other cardiac, pulmonary and/or arterial wall disease. It may present with exertional dyspnea, fatigue, cough, hemoptysis, palpitation and chest pain, but may also be asymptomatic. In serious cases, trachea constriction due to postural changes may lead to attacks of cyanosis with severe dyspnea. Sudden cardiac death has been reported in some cases.","definition_xrefs":["Orphanet:1676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary artery dilatation","secondary_identifiers":["UMLS:C1384816","MEDGEN:1842555","GARD:6757"],"synonyms":[{"name":"idiopathic dilatation of the pulmonary artery","type":"related"}],"termid":"MONDO:0015664","xrefs":{"Monarch":{"xref_id":"0015664"}}}


id: GO:1905383
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynapse.","definition_xrefs":["GO_REF:0000087","PMID:24449494","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynapse","synonyms":[{"name":"protein localisation in presynapse","type":"exact"},{"name":"protein localisation to presynapse","type":"exact"},{"name":"protein localization in presynapse","type":"exact"},{"name":"recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905383"}


id: MONDO:0021569
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Emery-Dreifuss muscular dystrophy inherited in an autosomal dominant pattern and caused by mutations in the LMNA gene.","definition_xrefs":["NCIT:C126745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"},{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 2, autosomal dominant","secondary_identifiers":["Orphanet:264","MEDGEN:98048","GARD:10230","ICD9:425.4","MESH:C535898","OMIM:181350","SCTID:240072005","DOID:0110301","DOID:0070247","SCTID:718178006","OMIM:159001","UMLS:C0410190"],"synonyms":[{"name":"EDMD2","type":"exact"},{"name":"EMD2","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 2, autosomal dominant","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy, autosomal dominant","type":"related"},{"name":"Hauptmann-Thannhauser muscular dystrophy","type":"exact"},{"name":"LGMD1B","type":"exact"},{"name":"LMNA autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in LMNA","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy type 1B","type":"exact"},{"name":"benign scapuloperoneal muscular dystrophy with cardiomyopathy","type":"related"},{"name":"limb-girdle muscular dystrophy due to lamin A/C deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 1B","type":"related"},{"name":"muscular dystrophy with early contractures and cardiomyopathy, autosomal dominant","type":"related"},{"name":"muscular dystrophy, limb-girdle type 1B","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 1B","type":"related"},{"name":"muscular dystrophy, proximal, type 1B","type":"related"},{"name":"proximal muscular dystrophy type 1B","type":"exact"},{"name":"scapuloilioperoneal atrophy with cardiopathy","type":"related"}],"termid":"MONDO:0021569","xrefs":{"Monarch":{"xref_id":"0021569"}}}


id: PBO:0050438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L pseudogene 2","termid":"PBO:0050438"}


id: GO:0000148
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  {"annotated_genes":["SJAG_02222","SJAG_05285","SJAG_01288","SJAG_03587","SJAG_01453"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60187,62897,64419,69670,102952],"is_not":false,"summary":null,"term":"GO:0000148"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain.","definition_xrefs":["PMID:7983071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01288":null,"SJAG_01453":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"1,3-beta-D-glucan synthase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"(1->3)-beta-glucan synthase complex","type":"exact"},{"name":"1,3-beta-glucan synthase complex","type":"exact"}],"termid":"GO:0000148","terms_by_termid":{"GO:0000148":null}}


id: GO:0030424
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.","definition_xrefs":["GOC:nln","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon","secondary_identifiers":["Wikipedia:Axon","NIF_Subcellular:sao1770195789"],"termid":"GO:0030424"}


id: GO:0016463
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(in) = ADP + phosphate + Zn2+(out).","definition_xrefs":["RHEA:20621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type zinc transporter activity","secondary_identifiers":["EC:7.2.2.12","MetaCyc:RXN0-5205"],"synonyms":[{"name":"ATP phosphohydrolase (Zn2+-exporting)","type":"exact"},{"name":"P(1B)-type ATPase activity","type":"narrow"},{"name":"P1B-type ATPase activity","type":"related"},{"name":"Zn(2+)-exporting ATPase activity","type":"related"},{"name":"Zn2+-exporting ATPase activity","type":"related"},{"name":"zinc exporting ATPase activity","type":"broad"},{"name":"zinc transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"zinc-exporting ATPase activity","type":"related"},{"name":"zinc-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0016463"}


id: GO:0047287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-D-galactoside + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->6)-beta-D-galactosyl derivative + CMP + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactosylceramide alpha-2,6-N-sialyltransferase activity (obsolete GO:0047287)","termid":"GO:0047287"}


id: MONDO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myelomonocytic leukemia (obsolete MONDO:0004968)","termid":"MONDO:0004968","xrefs":{"Monarch":{"xref_id":"0004968"}}}


id: PBO:0078139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 18","termid":"PBO:0078139"}


id: PBO:0089256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap14","termid":"PBO:0089256"}


id: PBO:0117110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTBDN antisense RNA 1","termid":"PBO:0117110"}


id: GO:0033917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pectic acid from the non-reducing end, releasing digalacturonate.","definition_xrefs":["EC:3.2.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"exo-poly-alpha-galacturonosidase activity","secondary_identifiers":["RHEA:56232","MetaCyc:3.2.1.82-RXN"],"synonyms":[{"name":"exopolygalacturanosidase activity","type":"related"},{"name":"exopolygalacturonosidase activity","type":"related"}],"termid":"GO:0033917"}


id: MONDO:0018459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated glycerol kinase deficiency (GKD) is a very rare X-linked disorder of glycerol metabolism characterized biochemically by elevated plasma and urine glycerol levels, and clinically by variable neurometabolic manifestations, depending on the age of onset, and varying from a life-threatening childhood metabolic crisis to an asymptomatic adult form (infantile GKD, juvenile GKD, and adult GKD ).","definition_xrefs":["Orphanet:408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"isolated glycerol kinase deficiency","secondary_identifiers":["icd11.foundation:542432712","MEDGEN:657821","GARD:2807","UMLS:C0574108"],"synonyms":[{"name":"hyperglycerolemia","type":"exact"},{"name":"isolated inborn glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic inborn glycerol kinase deficiency","type":"exact"}],"termid":"MONDO:0018459","xrefs":{"Monarch":{"xref_id":"0018459"}}}


id: PBO:0053581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 604","termid":"PBO:0053581"}


id: GO:0019649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways in which formaldehyde is processed and used as a carbon source for the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation","termid":"GO:0019649"}


id: GO:0097019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of neurotransmitter receptors.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor catabolic process (obsolete GO:0097019)","synonyms":[{"name":"neurotransmitter receptor breakdown","type":"exact"},{"name":"neurotransmitter receptor catabolism","type":"exact"},{"name":"neurotransmitter receptor degradation","type":"exact"}],"termid":"GO:0097019"}


id: GO:0036092
data:
  {"annotated_genes":["SJAG_00114","SJAG_02289","SJAG_00063","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61659,61809,63337,71787],"is_not":false,"summary":null,"term":"GO:0036092"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol-3-phosphate, a phosphatidylinositol monophosphate carrying the phosphate group at the 3-position.","definition_xrefs":["GOC:al","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00114":null,"SJAG_02289":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null},"synonyms":[{"name":"PI(3)P biosynthesis","type":"exact"},{"name":"PtdIns3P biosynthesis","type":"exact"},{"name":"phosphatidylinositol-3-phosphate anabolism","type":"exact"},{"name":"phosphatidylinositol-3-phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol-3-phosphate formation","type":"exact"},{"name":"phosphatidylinositol-3-phosphate synthesis","type":"exact"}],"termid":"GO:0036092","terms_by_termid":{"GO:0036092":null}}


id: MOD:01989
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tyrosine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-tyrosine.","definition_xrefs":["RESID:AA0626","PubMed:21526839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-tyrosine","synonyms":[{"name":"(2R,5S)-2,5-diamino-5-carboxyl-6-(hydroxyphenyl)-4-thiahexanoic acid","type":"exact"},{"name":"(2S)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-tyrosine","type":"exact"}],"termid":"MOD:01989"}


id: PBO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase (predicted)","termid":"PBO:0004290"}


id: PBO:0012284
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparant orthologs","termid":"PBO:0012284"}


id: SO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating linear nucleic acid molecule that is distinct from a chromosome in the organism. They are capped by terminal proteins covalently bound to the 5' ends of the DNA.","definition_xrefs":["PMID:21719542","SBOL:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_plasmid","synonyms":[{"name":"linear plasmid","type":"exact"}],"termid":"SO:0002212"}


id: PBO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 4","termid":"PBO:0061793"}


id: PBO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 53","termid":"PBO:0048342"}


id: PBO:0003459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85 (predicted)","termid":"PBO:0003459"}


id: MONDO:0017505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"apodia","termid":"MONDO:0017446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"apodia, bilateral","secondary_identifiers":["Orphanet:295107","icd11.foundation:1292290082","UMLS:C0685440","MEDGEN:672391"],"synonyms":[{"name":"congenital absence of foot, bilateral","type":"exact"}],"termid":"MONDO:0017505","xrefs":{"Monarch":{"xref_id":"0017505"}}}


id: PR:Q09783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim8 gene.","definition_xrefs":["UniProtKB:Q09783","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.04","synonyms":[{"name":"Spom972h-tim8","type":"exact"}],"termid":"PR:Q09783"}


id: PBO:0062449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 116 pseudogene","termid":"PBO:0062449"}


id: MONDO:0012682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary predisposition to infections in which the cause of the disease is a mutation in the TYK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 35","secondary_identifiers":["Orphanet:331226","MESH:C566928","MEDGEN:409751","GARD:17514","DOID:0111989","OMIM:611521","UMLS:C1969086"],"synonyms":[{"name":"HIES with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"IMD35","type":"exact"},{"name":"TYK2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"TYK2 deficiency","type":"exact"},{"name":"autosomal recessive hyper-IgE syndrome due to TYK2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in TYK2","type":"exact"},{"name":"hyper-IgE syndrome with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"immunodeficiency 35","type":"exact"},{"name":"immunodeficiency type 35","type":"exact"},{"name":"susceptibility to infection due to TYK2 deficiency","type":"exact"},{"name":"tyrosine kinase 2 deficiency","type":"exact"}],"termid":"MONDO:0012682","xrefs":{"Monarch":{"xref_id":"0012682"}}}


id: PR:Q10337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- brc1 gene.","definition_xrefs":["UniProtKB:Q10337","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.05c","synonyms":[{"name":"Spom972h-brc1","type":"exact"}],"termid":"PR:Q10337"}


id: FYPO:0002588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of nickel ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to nickel","synonyms":[{"name":"resistance to nickel during mitotic cell cycle","type":"related"},{"name":"resistance to nickel during vegetative growth","type":"exact"},{"name":"resistance to nickel ion","type":"exact"},{"name":"resistance to nickel ions","type":"exact"},{"name":"resistant to nickel","type":"exact"}],"termid":"FYPO:0002588"}


id: PBO:0091587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Sdj1","termid":"PBO:0091587"}


id: GO:0097079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: selenite(out) + H+(out) = selenite(in) + H+(in).","definition_xrefs":["GOC:mcc","PMID:20861301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"selenite:proton symporter activity","synonyms":[{"name":"selenite:H+ symporter activity","type":"exact"},{"name":"selenite:hydrogen symporter activity","type":"exact"}],"termid":"GO:0097079"}


id: PBO:0083273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083273"}


id: MONDO:0017285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Penoscrotal transposition (PST) is a rare congenital genital anomaly in which the scrotum is positioned superior and anterior to the penis. PST may present with a broad spectrum of anomalies ranging from simple shawl scrotum (doughnut scrotum) to very complex extreme transposition with craniofacial, central nervous system, cardiac, gastrointestinal, urological, and other genital (undescended testicles, hypospadias, chordee) malformations. Growth deficiency and intellectual disability may also be noticed (60% of cases).","definition_xrefs":["Orphanet:2842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penoscrotal transposition","secondary_identifiers":["MedDRA:10067287","GARD:4273","MEDGEN:357036","NCIT:C99010","SCTID:312005008","MESH:C536650","icd11.foundation:1417779551","UMLS:C1868854","HP:0100600"],"synonyms":[{"name":"Prepenile scrotum","type":"related"},{"name":"congenital penoscrotal transposition","type":"exact"},{"name":"congenital transposition of the penis","type":"related"},{"name":"penoscrotal transposition","type":"exact"},{"name":"penoscrotal transposition (disease)","type":"exact"}],"termid":"MONDO:0017285","xrefs":{"Monarch":{"xref_id":"0017285"}}}


id: GO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD81, a member of the tetraspan family.","definition_xrefs":["PMID:10229664","PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD81 complex","synonyms":[{"name":"ITGA4-ITGB1-CD81 complex","type":"narrow"}],"termid":"GO:0070520"}


id: PBO:0079652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V1","termid":"PBO:0079652"}


id: MONDO:0005369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing neuroendocrine tumor, composed of uniform, round, or polygonal cells having monotonous, centrally located nuclei and small nucleoli, infrequent mitoses, and no necrosis. The tumor may show a variety of patterns, such as solid, trabecular, and acinar. Electron microscopy shows small secretory granules. Immunohistochemical studies reveal NSE, as well as chromogranin immunoreactivity. Malignant histology (cellular pleomorphism, hyperchromatic nuclei, prominent nucleoli, necrosis, and mitoses) can occasionally be seen. Such cases may have an aggressive clinical course. Gastrointestinal tract and lung are common sites of involvement.","definition_xrefs":["NCIT:C2915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carcinoid tumor","secondary_identifiers":["UMLS:C0007095","HP:0100570","EFO:0004243","ICDO:8240/3","ICD9:209.60","MESH:D002276","MEDGEN:2838","NANDO:2200396","SCTID:443492008","ICDO:8241/3"],"synonyms":[{"name":"NET G1","type":"exact"},{"name":"carcinoid","type":"exact"},{"name":"carcinoid tumor","type":"exact"},{"name":"carcinoid tumor (disease)","type":"exact"},{"name":"carcinoid tumour (disease)","type":"exact"},{"name":"neuroendocrine neoplasm G1","type":"exact"},{"name":"neuroendocrine tumor G1","type":"exact"},{"name":"neuroendocrine tumour G1","type":"exact"}],"termid":"MONDO:0005369","xrefs":{"Monarch":{"xref_id":"0005369"}}}


id: PBO:0082078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-deoxynucleotidase; non-essential gene involved in deoxyribonucleoside monophosphate degradation; interacts with the DNA helicase Hpr5p; YGL101W has a paralog, YBR242W, that arose from the whole genome duplication","termid":"PBO:0082078"}


id: GO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate.","definition_xrefs":["EC:3.1.6.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-acetylgalactosamine-4-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.12-RXN","Reactome:R-HSA-2282889","Reactome:R-HSA-1793207","Reactome:R-HSA-9036065","Wikipedia:Arylsulfatase_B","Reactome:R-HSA-1606789"],"synonyms":[{"name":"N-acetyl-D-galactosamine-4-sulfate 4-sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine 4-sulfate sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine-4-sulphatase activity","type":"exact"},{"name":"acetylgalactosamine 4-sulfatase activity","type":"related"},{"name":"arylsulfatase B","type":"exact"},{"name":"chondroitinsulfatase","type":"broad"}],"termid":"GO:0003943"}


id: GO:0099500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space.","definition_xrefs":["GOC:aruk","ISBN:0071120009","PMID:18618940","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion to plasma membrane","termid":"GO:0099500"}


id: GO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation involved in immune response","termid":"GO:0002263"},{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation involved in immune response","synonyms":[{"name":"immune cell activation during immune response","type":"related"},{"name":"leucocyte activation during immune response","type":"related"},{"name":"leukocyte activation during immune response","type":"related"}],"termid":"GO:0002366"}


id: PBO:0084600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL200C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKL201C","termid":"PBO:0084600"}


id: PBO:0050007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction recognition protein","termid":"PBO:0050007"}


id: GO:0140894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to an endolysosomal pattern recognition receptor (PRR) of the toll-like family. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["PMID:29679565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endolysosomal toll-like receptor signaling pathway","synonyms":[{"name":"endolysosomal pattern recognition receptor signaling pathway","type":"exact"}],"termid":"GO:0140894"}


id: MONDO:0006866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of neuromuscular transmission that occurs in a minority of newborns born to women with myasthenia gravis. Clinical features are usually present at birth or develop in the first 3 days of life and consist of hypotonia and impaired respiratory, suck, and swallowing abilities. This condition is associated with the passive transfer of acetylcholine receptor antibodies through the placenta. In the majority of infants the myasthenic weakness resolves (i.e., transient neonatal myasthenia gravis) although this disorder may rarely continue beyond the neonatal period (i.e., persistent neonatal myasthenia gravis). (From Menkes, Textbook of Child Neurology, 5th ed, p823; Neurology 1997 Jan;48(1):50-4)","definition_xrefs":["MESH:D020941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia gravis","termid":"MONDO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal myasthenia gravis","secondary_identifiers":["DOID:14043","MEDGEN:102360","ICD9:775.2","SCTID:82178003","UMLS:C0158982","icd11.foundation:1274860004","MedDRA:10028963"],"synonyms":[{"name":"neonatal myasthenia gravis","type":"exact"}],"termid":"MONDO:0006866","xrefs":{"Monarch":{"xref_id":"0006866"}}}


id: GO:0099550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, across the synaptic cleft, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}


id: PBO:0058586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6719","termid":"PBO:0058586"}


id: GO:0005999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xylulose biosynthetic process","secondary_identifiers":["Reactome:R-HSA-163754"],"synonyms":[{"name":"xylulose anabolism","type":"exact"},{"name":"xylulose biosynthesis","type":"exact"},{"name":"xylulose formation","type":"exact"},{"name":"xylulose synthesis","type":"exact"}],"termid":"GO:0005999"}


id: MONDO:0011927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tufted angioma is a very rare, benign, cutaneous, slow-growing, vascular tumor mostly developing in infancy or early childhood.","definition_xrefs":["Orphanet:1063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tufted angioma","secondary_identifiers":["icd11.foundation:1994573217","NCIT:C4487","SCTID:705155008","ICD9:215.9","GARD:425","HP:0012329","ICDO:9161/0","UMLS:C0346073","MESH:C536924","OMIM:607859","MEDGEN:83402"],"synonyms":[{"name":"Nakagawa angioblastoma","type":"exact"},{"name":"angioblastoma of Nakagawa","type":"exact"},{"name":"angioma tufted","type":"related"},{"name":"angioma, tufted","type":"related"},{"name":"tufted angioma","type":"exact"},{"name":"tufted angioma (disease)","type":"exact"},{"name":"tufted angioma of skin","type":"exact"},{"name":"tufted angioma of the skin","type":"exact"},{"name":"tufted hemangioma","type":"exact"},{"name":"tufted hemangioma of skin","type":"exact"},{"name":"tufted hemangioma of the skin","type":"exact"},{"name":"tufted skin angioma","type":"exact"}],"termid":"MONDO:0011927","xrefs":{"Monarch":{"xref_id":"0011927"}}}


id: PBO:0065793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2","termid":"PBO:0065793"}


id: PBO:0068494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 78, pseudogene","termid":"PBO:0068494"}


id: GO:0060467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fertilization","termid":"GO:0080154"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fertilization","termid":"GO:0060467"}


id: GO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of glial cell proliferation.","definition_xrefs":["GOC:tb","GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"positively_regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell proliferation","termid":"GO:0060252"}


id: MONDO:0020128
data:
  {"annotated_genes":["SJAG_03170","SJAG_02919","SJAG_03894","SJAG_04084","SJAG_02286","SJAG_04321","SJAG_04178","SJAG_02695","SJAG_02096","SJAG_04387","SJAG_07000","SJAG_04907","SJAG_00459","SJAG_00754","SJAG_02399","SJAG_00053","SJAG_03815","SJAG_03598","SJAG_04567","SJAG_02509","SJAG_01352","SJAG_05289","SJAG_03328","SJAG_03345","SJAG_00237","SJAG_03106","SJAG_01317","SJAG_02289","SJAG_03495","SJAG_04489","SJAG_01260","SJAG_01537","SJAG_03923","SJAG_00853","SJAG_01522","SJAG_00668","SJAG_02242"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069,87068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008453"},{"annotations":[86940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[85599,87628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[87130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[87241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[86006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[85752,85753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[86866,86865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86993,86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008026"},{"annotations":[85613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[85499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[87371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[85702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030055"},{"annotations":[86684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957874"},{"annotations":[86373,86374,86375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[86983,86984,86985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[86667,86668,86669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[85676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[86523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[86053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[86548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[85579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"},{"annotations":[86664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[86958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[87425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[87429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[87254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[86446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"},{"annotations":[86163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[86162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859279"},{"annotations":[86541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009669"},{"annotations":[86797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009673"},{"annotations":[86403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009672"},{"annotations":[86563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010056"},{"annotations":[87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[86630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"Neurological 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disorder","type":"exact"}],"termid":"MONDO:0020128","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008025":null,"MONDO:0008026":null,"MONDO:0008453":null,"MONDO:0008458":null,"MONDO:0009669":null,"MONDO:0009672":null,"MONDO:0009673":null,"MONDO:0010043":null,"MONDO:0010056":null,"MONDO:0010190":null,"MONDO:0010338":null,"MONDO:0010459":null,"MONDO:0010532":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0011879":null,"MONDO:0012077":null,"MONDO:0012080":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0012945":null,"MONDO:0013243":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0013853":null,"MONDO:0013884":null,"MONDO:0014485":null,"MONDO:0014531":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0014874":null,"MONDO:0015353":null,"MONDO:0030055":null,"MONDO:0030860":null,"MONDO:0060585":null,"MONDO:0859279":null,"MONDO:0859529":null,"MONDO:0957874":null},"xrefs":{"Monarch":{"xref_id":"0020128"}}}


id: PBO:0056522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBTPS1 divergent transcript","termid":"PBO:0056522"}


id: GO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Posterior movement of an organism, e.g. following the direction of the tail of an animal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directional locomotion","termid":"GO:0033058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"backward locomotion","termid":"GO:0043057"}


id: MONDO:0008724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of arthrogryposis characterized by congenital cleft palate, microcephaly, craniostenosis and arthrogryposis (limitation of extension of elbows, flexed adducted thumbs, camptodactyly and clubfeet). Additional features include facial dysmorphism (\\\"myopathic\\\" stiff face, antimongoloid slanting, external ophthalmoplegia, telecanthus, low-set large malrotated ears, open mouth, mierogenia and high arched palate). Velopharyngeal insufficiency with difficulties in swallowing, increased secretion of the nose and throat, prominent occiput, generalized muscular hypotonia with mild cyanosis and no spontaneous movements, seizures, torticollis, areflexia, intellectual disability, hypertrichosis of the lower extremities, and scleredema (in the first days of life) are also observed. The disease often leads to early death. Transmission is autosomal recessive. No new cases of adducted thumbs-arthrogryposis, Christian type have been described since 1983.","definition_xrefs":["Orphanet:2952"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducted thumbs-arthrogryposis syndrome, Christian type","secondary_identifiers":["OMIM:201550","MEDGEN:929724","GARD:10277","UMLS:C4304055"],"synonyms":[{"name":"adducted thumbs syndrome","type":"related"}],"termid":"MONDO:0008724","xrefs":{"Monarch":{"xref_id":"0008724"}}}


id: PBO:0056758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 13, eEF1A lysine and N-terminal methyltransferase","termid":"PBO:0056758"}


id: GO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism disseminates its spores.","definition_xrefs":["Wikipedia:Spore"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore dispersal","secondary_identifiers":["GO:0075326","GO:0075327"],"synonyms":[{"name":"active spore dispersal on or near host","type":"narrow"},{"name":"active spore dispersal on or near host during symbiotic interaction","type":"narrow"},{"name":"passive spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host during symbiotic interaction","type":"exact"}],"termid":"GO:0075325"}


id: MONDO:0011089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus venosus (PDV) is an extremely rare form of congenital portosystemic shunt that results in the diversion of portal blood into the systemic circulation. Failure of DV closure after birth leads to PDV. PDV results in portal venous blood bypassing the liver and directly entering the systemic circulation, decreasing hepatic blood flow and increasing blood volume and toxic substances in the systemic circulation.","definition_xrefs":["PMID:36329968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital portosystemic shunt","termid":"MONDO:0018811"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus venosus","secondary_identifiers":["MEDGEN:91033","OMIM:601466","UMLS:C0344688","ICD9:747.49","MESH:C562830","SCTID:253330006"],"synonyms":[{"name":"PDV","type":"related"},{"name":"PSVS","type":"related"},{"name":"patent ductus venosus","type":"exact"},{"name":"portosystemic Venous shunt, congenital","type":"related"}],"termid":"MONDO:0011089","xrefs":{"Monarch":{"xref_id":"0011089"}}}


id: PBO:0055904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 27","termid":"PBO:0055904"}


id: GO:0016019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a peptidoglycan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:14698226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan immune receptor activity","synonyms":[{"name":"peptidoglycan receptor activity","type":"broad"},{"name":"peptidoglycan recognition activity","type":"narrow"}],"termid":"GO:0016019"}


id: PATO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000437 sleep pattern value (obsolete PATO:0000437)","termid":"PATO:0000437"}


id: MONDO:0019084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radiation proctitis is a rare rectal disease directly induced by pelvic radiotherapy and characterized by rectal bleeding, change in bowel habits, tenesmus and sepsis.","definition_xrefs":["Orphanet:70475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proctitis","termid":"MONDO:0005538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"radiation proctitis","secondary_identifiers":["ICD9:569.49","UMLS:C0400827","GARD:18900","ICD10CM:K62.7","SCTID:235760009","MEDGEN:586421","MedDRA:10037766","NORD:1615","icd11.foundation:177305885"],"synonyms":[{"name":"Proctitis","type":"exact"}],"termid":"MONDO:0019084","xrefs":{"Monarch":{"xref_id":"0019084"}}}


id: GO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a protein cross-link.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-histidyl-L-tyrosine (obsolete GO:0018151)","termid":"GO:0018151"}


id: FYPO:0004634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during one or both meiotic nuclear divisions is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during meiosis","synonyms":[{"name":"normal cellular protein level during meiosis","type":"exact"},{"name":"normal protein accumulation during meiosis","type":"related"},{"name":"normal protein level during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004634"}


id: PBO:0086406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative gluconokinase; sequence similarity to bacterial and human gluconokinase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; upregulated by deletion of the RNAP-II associated factor, PAF1","termid":"PBO:0086406"}


id: PATO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The temporal relation between the end of the process with respect to a reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"offset quality","termid":"PATO:0002324"}


id: PBO:0069892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1181, pseudogene","termid":"PBO:0069892"}


id: MONDO:0012680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the GLIS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 7","secondary_identifiers":["OMIM:611498","MESH:C566930","UMLS:C1969092","DOID:0111116","MEDGEN:369409"],"synonyms":[{"name":"GLIS2 nephronophthisis (disease)","type":"exact"},{"name":"NPHP7","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in GLIS2","type":"exact"},{"name":"nephronophthisis 7","type":"exact"},{"name":"nephronophthisis type 7","type":"exact"}],"termid":"MONDO:0012680","xrefs":{"Monarch":{"xref_id":"0012680"}}}


id: MONDO:0014928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the MKS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with ocular defect","termid":"MONDO:0016364"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"Joubert syndrome 28","secondary_identifiers":["DOID:0110997","UMLS:C4310705","GARD:16195","MEDGEN:934672","OMIM:617121"],"synonyms":[{"name":"JBTS28","type":"exact"},{"name":"Joubert syndrome 28","type":"exact"},{"name":"Joubert syndrome caused by mutation in MKS1","type":"exact"},{"name":"Joubert syndrome type 28","type":"exact"},{"name":"MKS1 Joubert syndrome","type":"exact"}],"termid":"MONDO:0014928","xrefs":{"Monarch":{"xref_id":"0014928"}}}


id: PBO:0079842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog A","termid":"PBO:0079842"}


id: GO:0051716
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id: GO:0050145
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  {"annotated_genes":["SJAG_00779","SJAG_02038","SJAG_03798","SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72353,72270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[76281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[80762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleoside 5'-phosphate + ATP = a ribonucleoside 5'-diphosphate + ADP.","definition_xrefs":["RHEA:24036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null,"SJAG_03798":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"nucleoside monophosphate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2162092","Reactome:R-HSA-75125","Reactome:R-HSA-75126","GO:0019201","Reactome:R-HSA-9754978","Reactome:R-HSA-6788810","MetaCyc:NUCLEOSIDE-PHOSPHATE-KINASE-RXN","Reactome:R-HSA-6788798","Reactome:R-HSA-73548","Reactome:R-HSA-73635","EC:2.7.4.4"],"synonyms":[{"name":"ATP:nucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"NMP-kinase activity","type":"related"},{"name":"nucleoside-phosphate kinase activity","type":"exact"},{"name":"nucleotide kinase activity","type":"related"}],"termid":"GO:0050145","terms_by_termid":{"GO:0004017":null,"GO:0004385":null,"GO:0033862":null}}


id: PBO:0077635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 1","termid":"PBO:0077635"}


id: MONDO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any corneal dystrophy (disease) in which the cause of the disease is a mutation in the TGFBI gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial-stromal TGFBI dystrophy","secondary_identifiers":["DOID:0060441"],"synonyms":[{"name":"TGFBI corneal dystrophy (disease)","type":"exact"},{"name":"corneal dystrophy (disease) caused by mutation in TGFBI","type":"exact"}],"termid":"MONDO:0000764","xrefs":{"Monarch":{"xref_id":"0000764"}}}


id: PBO:0082940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic glutaredoxin; thioltransferase, glutathione-dependent disulfide oxidoreductase involved in maintaining redox state of target proteins, also exhibits glutathione peroxidase activity, expression induced in response to stress; GRX2 has two in-frame start codons resulting in a shorter isoform that is retained in the cytosol and a longer form translocated to the mitochondrial matrix; GRX2 has a paralog, GRX1, that arose from the whole genome duplication","termid":"PBO:0082940"}


id: GO:0160212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["PMID:11823786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0038023","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycine-gated cation channel activity","termid":"GO:0160212"}


id: PBO:0079770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 3","termid":"PBO:0079770"}


id: PBO:0066554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17 pseudogene 1","termid":"PBO:0066554"}


id: GO:0043315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil degranulation","synonyms":[{"name":"activation of neutrophil degranulation","type":"narrow"},{"name":"positive regulation of neutrophil granule exocytosis","type":"exact"},{"name":"stimulation of neutrophil degranulation","type":"narrow"},{"name":"up regulation of neutrophil degranulation","type":"exact"},{"name":"up-regulation of neutrophil degranulation","type":"exact"},{"name":"upregulation of neutrophil degranulation","type":"exact"}],"termid":"GO:0043315"}


id: MONDO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign squamous neoplasm characterized by a papillary growth pattern, diffusely involving a specific anatomic site.","definition_xrefs":["NCIT:C9009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous papillomatosis","secondary_identifiers":["UMLS:C1378340","ICDO:8060/0","DOID:7532","MEDGEN:235130"],"synonyms":[{"name":"squamous papillomatosis","type":"exact"}],"termid":"MONDO:0004267","xrefs":{"Monarch":{"xref_id":"0004267"}}}


id: MONDO:0005164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal fibroblastic neoplasm affecting the soft tissue and bone.","definition_xrefs":["NCIT:C3043"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone sarcoma","termid":"MONDO:0021054"},{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrosarcoma","secondary_identifiers":["DOID:3355","ONCOTREE:FIBS","SCTID:443250000","EFO:0002087","ICDO:8810/3","ICD9:171.9","HP:0100244","MEDGEN:5178","MESH:D005354","NANDO:2200060","MedDRA:10016632","Orphanet:2030","UMLS:C0016057","GARD:2327"],"synonyms":[{"name":"fibrocytic tumor","type":"broad"},{"name":"fibrocytic tumour","type":"broad"},{"name":"fibrosarcoma","type":"exact"},{"name":"fibrosarcoma (disease)","type":"exact"},{"name":"fibrosarcoma (excluding infantile fibrosarcoma)","type":"exact"},{"name":"fibrosarcoma - not infantile","type":"exact"},{"name":"fibrosarcoma of soft tissue","type":"exact"},{"name":"fibrosarcoma, malignant","type":"exact"},{"name":"fibrous tissue neoplasm","type":"exact"},{"name":"malignant fibromatous neoplasm","type":"exact"}],"termid":"MONDO:0005164","xrefs":{"Monarch":{"xref_id":"0005164"}}}


id: PBO:0091083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit e","termid":"PBO:0091083"}


id: PBO:0028330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_rDNA_separation","termid":"PBO:0028330"}


id: PR:P08091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4G3.02","synonyms":[{"name":"Spom972h-pho1","type":"exact"}],"termid":"PR:P08091"}


id: GO:0003816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of component C4 to C4a and C4b (Arg-Ala bond), and component C2 to C2a and C2b (Lys-Lys or Arg-Lys bond).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1s activity (obsolete GO:0003816)","synonyms":[{"name":"C1 esterase activity","type":"related"},{"name":"C1s esterase activity","type":"related"},{"name":"activated complement C1s","type":"related"},{"name":"complement C1s","type":"related"},{"name":"complement component C1s activity","type":"exact"},{"name":"complement subcomponent C1s","type":"related"}],"termid":"GO:0003816"}


id: GO:1905247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GO_REF:0000059","GOC:jl","PMID:21745575","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aspartic-type peptidase activity","synonyms":[{"name":"activation of aspartic-type peptidase activity","type":"narrow"},{"name":"up regulation of aspartic-type peptidase activity","type":"exact"},{"name":"up-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"upregulation of aspartic-type peptidase activity","type":"exact"}],"termid":"GO:1905247"}


id: GO:1905803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["PMID:23721876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"negatively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to manganese ion","synonyms":[{"name":"down regulation of cellular response to manganese","type":"exact"},{"name":"down regulation of cellular response to manganese ion","type":"exact"},{"name":"down-regulation of cellular response to manganese","type":"exact"},{"name":"down-regulation of cellular response to manganese ion","type":"exact"},{"name":"downregulation of cellular response to manganese","type":"exact"},{"name":"downregulation of cellular response to manganese ion","type":"exact"},{"name":"inhibition of cellular response to manganese","type":"narrow"},{"name":"inhibition of cellular response to manganese ion","type":"narrow"},{"name":"negative regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905803"}


id: GO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ascospore wall chitin biosynthetic process (obsolete GO:0034217)","synonyms":[{"name":"ascospore wall chitin anabolism","type":"exact"},{"name":"ascospore wall chitin biosynthesis","type":"exact"},{"name":"ascospore wall chitin formation","type":"exact"},{"name":"ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034217"}


id: PBO:0068488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 72, pseudogene","termid":"PBO:0068488"}


id: PBO:0084977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is upregulated in cells treated with the aldehydes furfural and glycolaldehyde, the mycotoxin patulin, and also the quinone methide triterpene celastrol; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0084977"}


id: MOD:00212
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["RESID:AA0207","PubMed:7947803","PubMed:7981196","Unimod:407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-4-hydroxycinnamyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"Hydroxycinnamyl","type":"related"},{"name":"MOD_RES S-(4-hydroxycinnamyl)cysteine","type":"exact"},{"name":"S-4-hydroxycinnamyl-L-cysteine","type":"exact"},{"name":"S-para-coumaryl-L-cysteine","type":"exact"},{"name":"cinnamate cysteine thioester","type":"exact"},{"name":"hydroxycinnamyl","type":"related"}],"termid":"MOD:00212"}


id: GO:0140717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont into host plant tissue via the stromata, microscopic pores in the epidermis of the aerial parts of terrestrial plants. These pores are essential for photosynthesis, as they allow CO2 to diffuse into the plant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17419713","PMID:29307013","PMID:16959560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into host through the stromata","termid":"GO:0140717"}


id: MOD:01268
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:271#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site T","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01268"}


id: MONDO:0008551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A short-rib dysplasia characterized by thoracic dystrophy, laryngeal stenosis and a small pelvis.","definition_xrefs":["Orphanet:3317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracolaryngopelvic dysplasia","secondary_identifiers":["icd11.foundation:337990406","OMIM:187760","SCTID:723556008","MESH:C536517","UMLS:C1861197","GARD:5184","MEDGEN:349978","OMIM:187770"],"synonyms":[{"name":"Barnes syndrome","type":"exact"},{"name":"TLPD","type":"related"},{"name":"autosomal dominant thoracolaryngopelvic dysplasia","type":"related"},{"name":"thoracolaryngopelvic dysplasia","type":"exact"},{"name":"thoracopelvic dysostosis","type":"exact"}],"termid":"MONDO:0008551","xrefs":{"Monarch":{"xref_id":"0008551"}}}


id: PBO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase","termid":"PBO:0005609"}


id: PBO:0089303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssb2-like","termid":"PBO:0089303"}


id: PBO:0113433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small gene in chromosome III recombination enhancer; activated during mating-type switching; bound by condensin complex, deletion drastically changes chromosome III structure, alters donor preference; promoter functions as locus control region (LCR) that regulates both transcription and long-range chromatin interactions","termid":"PBO:0113433"}


id: PBO:0049078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 119","termid":"PBO:0049078"}


id: MONDO:0054581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Townes-Brocks syndrome","termid":"MONDO:0007142"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Townes-Brocks syndrome 1","secondary_identifiers":["MEDGEN:1635275","UMLS:C4551481","OMIM:107480"],"synonyms":[{"name":"TBS1","type":"related"},{"name":"Townes-Brocks syndrome 1","type":"exact"},{"name":"Townes-Brocks-branchiootorenal-like syndrome","type":"related"},{"name":"anus, imperforate, with hand, Foot, and Ear anomalies","type":"related"},{"name":"deafness, sensorineural, with imperforate anus and thumb anomalies","type":"related"},{"name":"rear syndrome","type":"related"},{"name":"renal-ear-anal-radial syndrome","type":"related"},{"name":"townes-brocks branchiootorenal-like syndrome","type":"exact"}],"termid":"MONDO:0054581","xrefs":{"Monarch":{"xref_id":"0054581"}}}


id: PBO:0039006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 2","termid":"PBO:0039006"}


id: PBO:0045533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 3L","termid":"PBO:0045533"}


id: GO:0042401
data:
  {"annotated_genes":["SJAG_04481","SJAG_01455","SJAG_05007","SJAG_03632","SJAG_00043","SJAG_03167","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79588,73646,77557,74592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[76180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[78162,75196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[78161,103072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring at the level of individual cells resulting in the formation of any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"amine biosynthetic process","termid":"GO:0009309"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03632":null,"SJAG_04481":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biogenic amine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"biogenic amine anabolism","type":"exact"},{"name":"biogenic amine biosynthesis","type":"exact"},{"name":"biogenic amine formation","type":"exact"},{"name":"biogenic amine synthesis","type":"exact"},{"name":"cellular biogenic amine biosynthetic process","type":"exact"}],"termid":"GO:0042401","terms_by_termid":{"GO:0000162":null,"GO:0006597":null,"GO:0008295":null,"GO:0033387":null}}


id: MONDO:0032930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with poor growth and with or without seizures or ataxia","secondary_identifiers":["OMIM:618808","UMLS:C5394135","MEDGEN:1711370"],"synonyms":[{"name":"IDPOGSA","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH POOR GROWTH AND WITH OR WITHOUT SEIZURES OR ATAXIA","type":"related"}],"termid":"MONDO:0032930","xrefs":{"Monarch":{"xref_id":"0032930"}}}


id: PBO:0081526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 436","termid":"PBO:0081526"}


id: PBO:0031109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_microtubule-destabilizing_substance","termid":"PBO:0031109"}


id: PATO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's dependence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic","termid":"PATO:0001455"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: MONDO:0008674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete WHIM syndrome (obsolete MONDO:0008674)","secondary_identifiers":["NANDO:2200767"],"termid":"MONDO:0008674","xrefs":{"Monarch":{"xref_id":"0008674"}}}


id: GO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle tissue development","termid":"GO:0016202"}


id: SO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting one base ahead.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_frameshift_variant","synonyms":[{"name":"-1 frameshift variant","type":"exact"},{"name":"minus 1 frameshift variant","type":"exact"}],"termid":"SO:0001592"}


id: MONDO:0015111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroesophageal disease (obsolete MONDO:0015111)","secondary_identifiers":["Orphanet:101936"],"termid":"MONDO:0015111","xrefs":{"Monarch":{"xref_id":"0015111"}}}


id: PR:O94485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.04","synonyms":[{"name":"Spom972h-SPCC417.04","type":"exact"}],"termid":"PR:O94485"}


id: GO:0009935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nutrients into a cell or organelle.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete nutrient import (obsolete GO:0009935)","synonyms":[{"name":"nutrient import","type":"exact"},{"name":"nutrient uptake","type":"exact"}],"termid":"GO:0009935"}


id: MONDO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 4","termid":"MONDO:0016924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 4","secondary_identifiers":["Orphanet:262716","UMLS:C5679719","MEDGEN:1826041","icd11.foundation:1245616284","GARD:20861"],"synonyms":[{"name":"partial duplication of chromosome 4p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 4","type":"exact"},{"name":"partial trisomy of chromosome 4p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 4","type":"exact"}],"termid":"MONDO:0016941","xrefs":{"Monarch":{"xref_id":"0016941"}}}


id: GO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD86, a CD marker that occurs on antigen presenting cells that provides co-stimulatory signals necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD86 biosynthetic process","synonyms":[{"name":"CD86 anabolism","type":"exact"},{"name":"CD86 biosynthesis","type":"exact"},{"name":"CD86 formation","type":"exact"},{"name":"CD86 synthesis","type":"exact"}],"termid":"GO:0035781"}


id: PBO:0052621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRR1 pseudogene 1","termid":"PBO:0052621"}


id: PBO:0030950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation","termid":"PBO:0030950"}


id: GO:0044843
data:
  {"annotated_genes":["SJAG_03699","SJAG_02810","SJAG_03160","SJAG_00071","SJAG_00996","SJAG_01311","SJAG_01401","SJAG_02404","SJAG_01210","SJAG_02723","SJAG_03591","SJAG_00991","SJAG_03048","SJAG_04140","SJAG_01825","SJAG_01187","SJAG_05346","SJAG_00100","SJAG_01000","SJAG_02026","SJAG_03681","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108672,78684,112343,74514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000082"},{"annotations":[102676,116204,109203,89284,101940],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[91646,109980],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[93672,92078,99201,92498],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[106139,106974,102691,109498,117371,106295],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[75159,77089,115642,116206,109209,92084],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G1 phase commits to S phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00100":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01187":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044843","terms_by_termid":{"GO:0000082":null,"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: PBO:0113332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by fungal homology and RT-PCR;  localizes to cytosol and peroxisomes","termid":"PBO:0113332"}


id: GO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of floral organs. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid","PO:0025395","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"flower structural organization","termid":"GO:0048461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ structural organization","secondary_identifiers":["GO:0048435"],"synonyms":[{"name":"floral organ structural organisation","type":"exact"}],"termid":"GO:0048450"}


id: PBO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.31","termid":"PBO:0005241"}


id: MONDO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving the exposure of one's genitals to an unsuspecting stranger.","definition_xrefs":["NCIT:C94352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exhibitionism","secondary_identifiers":["ICD9:302.4","DOID:10236","MESH:D005084","ICD10CM:F65.2","SCTID:58349009","MEDGEN:41913","UMLS:C0015269"],"termid":"MONDO:0000983","xrefs":{"Monarch":{"xref_id":"0000983"}}}


id: PBO:0014293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein Scs2","termid":"PBO:0014293"}


id: MONDO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000529 (obsolete MONDO:0000529)","termid":"MONDO:0000529","xrefs":{"Monarch":{"xref_id":"0000529"}}}


id: GO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel.","definition_xrefs":["PMID:10206335","PMID:16931858","GOC:BHF","GOC:sl","PMID:21196346","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"amelogenesis","termid":"GO:0097186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enamel mineralization","synonyms":[{"name":"enamel formation","type":"related"}],"termid":"GO:0070166"}


id: PBO:0075608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondin 2","termid":"PBO:0075608"}


id: FYPO:0003319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which mannose-specific flocculation is increased. Mannose-specific flocculation is the non-sexual aggregation of cells, mediated via the binding of cell wall proteins on one cell to mannose residues on the other, and when it is increased cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah","GO:0036350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell-cell adhesion","termid":"FYPO:0005760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased mannose-specific flocculation","synonyms":[{"name":"increased cell-cell adhesion involved in mannose-specific flocculation","type":"exact"},{"name":"increased mannose-specific flocculation during mitotic cell cycle","type":"related"},{"name":"increased mannose-specific flocculation during vegetative growth","type":"exact"}],"termid":"FYPO:0003319"}


id: PBO:0055529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2964","termid":"PBO:0055529"}


id: PBO:0080873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YME1L1 pseudogene 1","termid":"PBO:0080873"}


id: PBO:0033757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_pole_body_duplication","termid":"PBO:0033757"}


id: PBO:0059819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 45","termid":"PBO:0059819"}


id: FYPO:0004161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0004161"}


id: GO:1903594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of histamine secretion by mast cell.","definition_xrefs":["PMID:18253931","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"regulation of histamine secretion by mast cell","termid":"GO:1903593"},{"relation_name":"negatively_regulates","term_name":"histamine secretion by mast cell","termid":"GO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of histamine secretion by mast cell","synonyms":[{"name":"down regulation of histamine secretion by mast cell","type":"exact"},{"name":"down-regulation of histamine secretion by mast cell","type":"exact"},{"name":"downregulation of histamine secretion by mast cell","type":"exact"},{"name":"inhibition of histamine secretion by mast cell","type":"narrow"}],"termid":"GO:1903594"}


id: PBO:0041547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 21","termid":"PBO:0041547"}


id: PBO:0030091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_tetrapeptide_nitrogen_source","termid":"PBO:0030091"}


id: PBO:0090084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox11","termid":"PBO:0090084"}


id: PBO:0065914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB guanine nucleotide exchange factor 1","termid":"PBO:0065914"}


id: MONDO:0018837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasculitis, characterized by inflammatory lesions in the wall of vessels, may be due to different viruses.","definition_xrefs":["Orphanet:48435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary vasculitis","termid":"MONDO:0018640"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious vasculitis","secondary_identifiers":["MEDGEN:1376009","GARD:18835","SCTID:724063005","UMLS:C4510302"],"termid":"MONDO:0018837","xrefs":{"Monarch":{"xref_id":"0018837"}}}


id: MONDO:0013584
data:
  {"annotated_genes":["SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86286],"is_not":false,"summary":null,"term":"MONDO:0013584"}]},"cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by adult onset of progressive peripheral sensory loss, progressive hearing impairment, and early-onset dementia that has material basis in heterozygous mutation in the DNMT1 gene on chromosome 19p13.","definition_xrefs":["DOID:0070158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002039","MONDO:0005559","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hereditary sensory neuropathy-deafness-dementia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C580162","Orphanet:456318","GARD:11927","NORD:1903","OMIM:614116","UMLS:C3279885","MEDGEN:481515"],"synonyms":[{"name":"DNMT1-related dementia, deafness, and sensory neuropathy","type":"related"},{"name":"HSAN1E","type":"exact"},{"name":"HSN 1E","type":"related"},{"name":"HSN1E","type":"exact"},{"name":"HSNIE","type":"related"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type 1E","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1E","type":"related"},{"name":"hereditary sensory neuropathy type 1E","type":"related"},{"name":"hereditary sensory neuropathy type IE","type":"exact"},{"name":"hereditary sensory neuropathy with hearing loss and dementia","type":"related"},{"name":"hereditary sensory neuropathy-sensorineural hearing loss-dementia syndrome","type":"exact"},{"name":"neuropathy, hereditary sensory, type 1E","type":"related"},{"name":"neuropathy, hereditary sensory, type IE","type":"related"},{"name":"neuropathy, hereditary sensory, with hearing loss and dementia","type":"related"}],"termid":"MONDO:0013584","terms_by_termid":{"MONDO:0013584":null},"xrefs":{"Monarch":{"xref_id":"0013584"}}}


id: GO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a 90S preribosome. The 90S preribosome represents the complex that forms on the primary rRNA transcript before it splits into the small subunit and large subunit portions.","definition_xrefs":["GOC:krc","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"90S preribosome assembly","termid":"GO:0034463"}


id: GO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class II protein complex.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"MHC class II protein complex assembly","termid":"GO:0002399"}


id: PR:P20772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trifunctional purine biosynthetic protein adenosine-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthetic protein ADE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.01","secondary_identifiers":["UniProtKB:P20772"],"synonyms":[{"name":"Spom972h-GART","type":"exact"}],"termid":"PR:P20772"}


id: PBO:0077941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-1","termid":"PBO:0077941"}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: PBO:0049155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1C","termid":"PBO:0049155"}


id: SO:0001610
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence at the C terminus deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"CDS_three_prime_extension","termid":"SO:0002229"},{"relation_name":"is_a","term_name":"elongated_polypeptide","termid":"SO:0001609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide_C_terminal","synonyms":[{"name":"elongated polypeptide C terminal","type":"exact"}],"termid":"SO:0001610"}


id: GO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by lymphocytes expressing specific receptors for antigen produced through a somatic diversification process that includes somatic recombination of variable lymphocyte receptors (VLR) incorporating leucine-rich repeat (LRR) domains, and allowing for enhanced responses upon subsequent exposures to the same antigen (immunological memory). Examples of this process are found in jawless fish, including the lampreys (Petromyzontidae) and hagfishes (Myxinidae).","definition_xrefs":["GOC:mtg_sensu","GOC:add","PMID:16373579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune response based on somatic recombination of immune receptors built from leucine-rich repeat domains","synonyms":[{"name":"adaptive immune response based on somatic recombination of VLR built from LRR domains","type":"exact"},{"name":"adaptive immune response based on somatic recombination of variable lymphocyte receptors built from leucine-rich repeat domains","type":"exact"},{"name":"adaptive immune response in jawless fish","type":"exact"}],"termid":"GO:0002459"}


id: MONDO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of the inferior vena cava","secondary_identifiers":["Orphanet:95499","SCTID:81577001","GARD:19276","ICD9:747.49","MEDGEN:539592","UMLS:C0265932"],"synonyms":[{"name":"congenital anomaly of the IVC","type":"exact"},{"name":"congenital anomaly of the inferior caval vein","type":"exact"}],"termid":"MONDO:0019830","xrefs":{"Monarch":{"xref_id":"0019830"}}}


id: PBO:0074076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 51","termid":"PBO:0074076"}


id: FYPO:0003553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA catabolic process","synonyms":[{"name":"increased RNA breakdown","type":"exact"},{"name":"increased RNA catabolism","type":"exact"},{"name":"increased RNA degradation","type":"exact"}],"termid":"FYPO:0003553"}


id: PBO:0074342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 1","termid":"PBO:0074342"}


id: GO:0035272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system.","definition_xrefs":["Wikipedia:Exocrine_gland","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exocrine system development","termid":"GO:0035272"}


id: GO:0060161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the dopamine receptor protein signaling pathway. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"positively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine receptor signaling pathway","synonyms":[{"name":"positive regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060161"}


id: PBO:0027907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_multiseptate_cell_with_fragmented_nucleus","termid":"PBO:0027907"}


id: FYPO:0003131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"normal protein phosphorylation during cellular response to IR","type":"exact"},{"name":"normal protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003131"}


id: PR:O59736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leu3 gene.","definition_xrefs":["UniProtKB:O59736","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.16c","synonyms":[{"name":"Spom972h-leu3","type":"exact"},{"name":"alpha-IPM synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-isopropylmalate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59736"}


id: GO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nucleotide-sulfate from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transporter activity","termid":"GO:0015116"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nucleotide-sulfate transmembrane transporter activity","secondary_identifiers":["GO:0005341"],"synonyms":[{"name":"nucleotide-sulphate transporter activity","type":"exact"}],"termid":"GO:0005340"}


id: GO:0006776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid, all of which are derivatives of beta-carotene.","definition_xrefs":["GOC:jl","PMID:1503811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"vitamin A metabolic process","synonyms":[{"name":"vitamin A metabolism","type":"exact"}],"termid":"GO:0006776"}


id: PBO:0068229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 536","termid":"PBO:0068229"}


id: MONDO:0008738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complete lack of ganglia in the intestine. This is an extremely severe form of aganglionosis distinct from Hirschsprung Disease. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:596929","NCIT:C101074"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Hirschsprung disease","termid":"MONDO:0018309"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aganglionosis, total intestinal","secondary_identifiers":["UMLS:C0345240","MESH:C538058","NANDO:1200460","MEDGEN:83378","OMIM:202550","NANDO:2200948"],"synonyms":[{"name":"aganglionosis, total intestinal","type":"exact"},{"name":"total intestinal aganglionosis","type":"exact"}],"termid":"MONDO:0008738","xrefs":{"Monarch":{"xref_id":"0008738"}}}


id: GO:0050009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + propan-2-ol = acetone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.80","RHEA:21792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"isopropanol dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01550","MetaCyc:ISOPROPANOL-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"propan-2-ol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050009"}


id: GO:0022412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular process involved in reproduction in multicellular organism","synonyms":[{"name":"reproductive cellular process in multicellular organism","type":"exact"}],"termid":"GO:0022412"}


id: PBO:0081481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 358","termid":"PBO:0081481"}


id: PBO:0085663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in N-glycosylation; deletion mutation confers sensitivity to exidative stress and shows synthetic lethality with mutations in the spindle checkpoint genes BUB3 and MAD1; YNL080C is not an essential gene","termid":"PBO:0085663"}


id: PBO:0078864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC7 antisense RNA 1","termid":"PBO:0078864"}


id: MONDO:0019884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy of the long arm of chromosome 10 (10q) is characterized by pre- and postnatal growth retardation, a pattern of specific facial features, hypotonia, and developmental and psychomotor delay.","definition_xrefs":["Orphanet:96102"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 10","termid":"MONDO:0016961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 10q","secondary_identifiers":["UMLS:C2931728","MESH:C538087","NORD:934","GARD:19317","MEDGEN:419480","SCTID:718689000"],"synonyms":[{"name":"Chromosome 10, Distal Trisomy 10q","type":"exact"},{"name":"distal duplication 10q","type":"exact"},{"name":"distal trisomy type 10q","type":"exact"},{"name":"telomeric duplication 10q","type":"exact"},{"name":"trisomy 10qter","type":"exact"}],"termid":"MONDO:0019884","xrefs":{"Monarch":{"xref_id":"0019884"}}}


id: FYPO:0003612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population of spores are viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"viable spore population","synonyms":[{"name":"viable population of spores","type":"exact"}],"termid":"FYPO:0003612"}


id: PBO:0049752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 2","termid":"PBO:0049752"}


id: GO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a selenide-sulfide bond to form the cystine-like L-cysteinyl-L-selenocysteine, as in vertebrate selenopeptide P.","definition_xrefs":["RESID:AA0358"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteinyl-L-selenocysteine (obsolete GO:0050837)","termid":"GO:0050837"}


id: PBO:0084561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif","termid":"PBO:0084561"}


id: PBO:0042254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil serine rich protein 2","termid":"PBO:0042254"}


id: PBO:0047527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 1","termid":"PBO:0047527"}


id: GO:0098879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}


id: MONDO:1012531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digital dermatitis, non-human animal","termid":"MONDO:1011774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digital dermatitis, cattle","secondary_identifiers":["OMIA:002224-9913"],"termid":"MONDO:1012531","xrefs":{"Monarch":{"xref_id":"1012531"}}}


id: PBO:0016904
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 RNA is transcribed with a 3' extension that is removed by post-transcriptional RNA processing","termid":"PBO:0016904"}


id: PBO:0068476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 55, pseudogene","termid":"PBO:0068476"}


id: FYPO:0001945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport during vegetative growth","termid":"FYPO:0004848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein secretion","synonyms":[{"name":"normal protein secretion during mitotic cell cycle","type":"related"},{"name":"normal protein secretion during vegetative growth","type":"exact"}],"termid":"FYPO:0001945"}


id: GO:0060945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron differentiation","synonyms":[{"name":"heart neuron differentiation","type":"exact"}],"termid":"GO:0060945"}


id: GO:0023027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class I molecules via the antigen binding groove.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I protein binding","termid":"GO:0042288"},{"relation_name":"part_of","term_name":"MHC class I protein complex binding","termid":"GO:0023024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class I protein binding, via antigen binding groove","termid":"GO:0023027"}


id: PBO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_organization","termid":"PBO:0031578"}


id: PBO:0050388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 12","termid":"PBO:0050388"}


id: PBO:0053499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 479","termid":"PBO:0053499"}


id: GO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetate + diphosphate = acetyl phosphate + phosphate.","definition_xrefs":["RHEA:24276","EC:2.7.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"acetate kinase (diphosphate) activity","secondary_identifiers":["KEGG_REACTION:R00320","MetaCyc:ACETATE-KINASE-PYROPHOSPHATE-RXN"],"synonyms":[{"name":"acetate kinase (pyrophosphate) activity","type":"related"},{"name":"diphosphate:acetate phosphotransferase activity","type":"related"},{"name":"pyrophosphate-acetate phosphotransferase activity","type":"related"}],"termid":"GO:0047601"}


id: MONDO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A infectious disease involving the Bacteria.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial infectious disease (obsolete MONDO:0001026)","synonyms":[{"name":"Bacteria infection","type":"exact"},{"name":"infections, Bacteria","type":"related"}],"termid":"MONDO:0001026","xrefs":{"Monarch":{"xref_id":"0001026"}}}


id: FYPO:0005965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lithium import","termid":"FYPO:0005964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased lithium import","synonyms":[{"name":"decreased cellular lithium import","type":"exact"},{"name":"decreased lithium import during mitotic cell cycle","type":"related"},{"name":"decreased lithium import during vegetative growth","type":"exact"},{"name":"decreased lithium import into cell","type":"exact"},{"name":"decreased lithium ion import","type":"exact"},{"name":"reduced lithium import","type":"exact"}],"termid":"FYPO:0005965"}


id: RO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_ends","termid":"RO:0002084"}


id: GO:0016583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome modeling (obsolete GO:0016583)","synonyms":[{"name":"nucleosome modeling","type":"exact"}],"termid":"GO:0016583"}


id: MONDO:0006550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign polypoid lesion of mesodermal origin that arises from the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin tag","termid":"MONDO:0004026"},{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroepithelial polyp of urethra","secondary_identifiers":["UMLS:C1336884","DOID:8108","NCIT:C6170","MEDGEN:234460"],"synonyms":[{"name":"fibroepithelial polyp of the urethra","type":"exact"},{"name":"fibroepithelial polyp of urethra","type":"exact"},{"name":"skin tag of urethra","type":"related"},{"name":"urethra fibroepithelial polyp","type":"exact"},{"name":"urethra skin tag","type":"exact"},{"name":"urethral fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0006550","xrefs":{"Monarch":{"xref_id":"0006550"}}}


id: PBO:0081444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300 pseudogene 1","termid":"PBO:0081444"}


id: GO:0033138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation","termid":"GO:0033135"},{"relation_name":"positively_regulates","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-serine phosphorylation","termid":"GO:0033138"}


id: GO:0010796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the volume of a multivesicular body, a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles.","definition_xrefs":["GOC:jp","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of multivesicular body size (obsolete GO:0010796)","termid":"GO:0010796"}


id: MONDO:0007806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotrichosis 4 (obsolete MONDO:0007806)","termid":"MONDO:0007806","xrefs":{"Monarch":{"xref_id":"0007806"}}}


id: PBO:0053982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1298","termid":"PBO:0053982"}


id: PBO:0077211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 2","termid":"PBO:0077211"}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: GO:0110127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unloading solutes that are produced in the source tissues, from the sieve tube or companion cell of the phloem into the sink tissues.","definition_xrefs":["GOC:lr","PMID:19025382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem transport","termid":"GO:0010233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phloem unloading","termid":"GO:0110127"}


id: PBO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-actinin","termid":"PBO:0002181"}


id: GO:0019328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallate catabolic process","termid":"GO:0019396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"anaerobic gallate catabolic process","secondary_identifiers":["MetaCyc:P3-PWY"],"synonyms":[{"name":"anaerobic gallate breakdown","type":"exact"},{"name":"anaerobic gallate catabolism","type":"exact"},{"name":"anaerobic gallate degradation","type":"exact"},{"name":"anaerobic gallic acid catabolic process","type":"exact"},{"name":"anaerobic gallic acid catabolism","type":"exact"},{"name":"gallate fermentation","type":"exact"}],"termid":"GO:0019328"}


id: MONDO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cleft larynx, posterior","secondary_identifiers":["GARD:4015","Orphanet:2005","OMIM:215800","UMLS:C1859083","MEDGEN:349091"],"synonyms":[{"name":"Novak syndrome","type":"related"},{"name":"cleft larynx, posterior","type":"exact"},{"name":"laryngotracheoesophageal cleft pulmonary hypoplasia","type":"related"},{"name":"stridor, congenital","type":"related"}],"termid":"MONDO:0008990","xrefs":{"Monarch":{"xref_id":"0008990"}}}


id: PBO:0012600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin","termid":"PBO:0012600"}


id: PBO:0028682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope,_with_spindle_pole_body_in_cytoplasm","termid":"PBO:0028682"}


id: PBO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor","termid":"PBO:0005004"}


id: FYPO:0003808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the movement of mitochondria is normal (i.e. indistinguishable from wild type). Mitochondria normally form tips that grow and shrink stochastically.","definition_xrefs":["PMID:19373772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial motility","synonyms":[{"name":"normal mitochondrial dynamics","type":"exact"},{"name":"normal mitochondrial mobility","type":"exact"},{"name":"normal mitochondrial motility during mitotic cell cycle","type":"exact"},{"name":"normal mitochondrial motility during vegetative growth","type":"exact"},{"name":"normal nuclear membrane morphology","type":"narrow"}],"termid":"FYPO:0003808"}


id: GO:0010664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.","definition_xrefs":["GOC:rl","GOC:tb","GOC:mtg_apoptosis","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell apoptotic process","termid":"GO:0010656"},{"relation_name":"is_a","term_name":"regulation of striated muscle cell apoptotic process","termid":"GO:0010662"},{"relation_name":"negatively_regulates","term_name":"striated muscle cell apoptotic process","termid":"GO:0010658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of striated muscle cell apoptotic process","synonyms":[{"name":"down regulation of striated muscle cell apoptosis","type":"exact"},{"name":"down-regulation of striated muscle cell apoptosis","type":"exact"},{"name":"downregulation of striated muscle cell apoptosis","type":"exact"},{"name":"inhibition of striated muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010664"}


id: MONDO:0013707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 24","secondary_identifiers":["GARD:22560","DOID:0081197","MEDGEN:482173","UMLS:C3280543","OMIM:614345"],"synonyms":[{"name":"MRT24","type":"exact"},{"name":"intellectual disability, autosomal recessive 24","type":"exact"},{"name":"mental retardation, autosomal recessive 24","type":"related"}],"termid":"MONDO:0013707","xrefs":{"Monarch":{"xref_id":"0013707"}}}


id: GO:0039648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters ubiquitin-like protein modification of target proteins of either host or symbiont proteins. This includes ubiquitination, SUMOylation, NEDDylation, and ISG15ylation. The ubiquitination status of a protein  affects whether it is targeted to the proteasome for degradation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25166298","PMID:26712804","PMID:26483404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host ubiquitin-like protein modification","synonyms":[{"name":"modulation by symbiont of host protein ubiquitination","type":"exact"},{"name":"modulation of host ubiquitin pathway by virus","type":"narrow"},{"name":"symbiont-mediated perturbation of host protein SUMOlyation","type":"narrow"},{"name":"symbiont-mediated perturbation of host protein ubiquitination","type":"narrow"}],"termid":"GO:0039648"}


id: PBO:0046728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"envoplakin","termid":"PBO:0046728"}


id: PBO:0081613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 541","termid":"PBO:0081613"}


id: MONDO:0021640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of malignant gliomas that includes anaplastic astrocytoma, anaplastic oligodendroglioma, anaplastic oligoastrocytoma, and anaplastic ependymoma.","definition_xrefs":["NCIT:C127816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"grade III glioma","secondary_identifiers":["UMLS:C4287997","MEDGEN:925529"],"synonyms":[{"name":"WHO grade III glioma","type":"exact"},{"name":"anaplastic glioma","type":"exact"}],"termid":"MONDO:0021640","xrefs":{"Monarch":{"xref_id":"0021640"}}}


id: MONDO:0015563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blue cone monochromatism (obsolete MONDO:0015563)","termid":"MONDO:0015563","xrefs":{"Monarch":{"xref_id":"0015563"}}}


id: GO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly stable complex composed of the ATAC complex and the mediator complex (also called TRAP or MED). MECO binds and regulates the transcription of a subset of non-coding RNAs transcribed by RNA polymerase II.","definition_xrefs":["PMID:20508642","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MECO complex","synonyms":[{"name":"meta-coactivator complex","type":"exact"}],"termid":"GO:0002929"}


id: PBO:0056690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 11","termid":"PBO:0056690"}


id: MONDO:0004573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dietary deficiency of riboflavin causing a syndrome chiefly marked by cheilitis, angular stomatitis, glossitis associated with a purplish red or magenta-colored tongue that may show fissures, corneal vascularization, dyssebacia, and anemia. (Dorland, 27th ed)","definition_xrefs":["MESH:D012257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariboflavinosis","secondary_identifiers":["SCTID:20307000","MEDGEN:1830329","UMLS:C5779638","ICD9:266.0","DOID:8454","OMIM:615026"],"synonyms":[{"name":"riboflavin deficiency","type":"exact"},{"name":"vitamin B2 deficiency","type":"exact"}],"termid":"MONDO:0004573","xrefs":{"Monarch":{"xref_id":"0004573"}}}


id: MONDO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An auditory system disease that is characterized by a thin retracted ear drum becomes sucked into the middle-ear space and stuck (i.e., adherent) to the ossicles and other bones of the middle ear.","definition_xrefs":["Wikipedia:Otitis_media#Adhesive_otitis_media","DOID:11235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesive otitis media","secondary_identifiers":["MEDGEN:509984","SCTID:7699004","ICD10CM:H74.1","UMLS:C0155478","ICD9:385.1","ICD9:385.10"],"synonyms":[{"name":"adhesive middle ear disease","type":"exact"},{"name":"adhesive otitis media","type":"exact"},{"name":"chronic adhesive otitis media","type":"exact"},{"name":"fibrotic adhesive otitis media","type":"related"}],"termid":"MONDO:0001234","xrefs":{"Monarch":{"xref_id":"0001234"}}}


id: PBO:0045888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma","termid":"PBO:0045888"}


id: GO:0043676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The layer of sexine which forms a roof over the columella, granules or other infratectal elements.","definition_xrefs":["PMID:33706055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tectum","synonyms":[{"name":"sexine 2","type":"exact"}],"termid":"GO:0043676"}


id: PBO:0082885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with and phosphorylated by Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcription, specifically required for Gcn4p degradation, may be sensor of cellular protein biosynthetic capacity","termid":"PBO:0082885"}


id: PBO:0073342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 4","termid":"PBO:0073342"}


id: MONDO:0859289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal dysmotility syndrome","secondary_identifiers":["OMIM:620045","UMLS:C5774219","MEDGEN:1823992"],"termid":"MONDO:0859289","xrefs":{"Monarch":{"xref_id":"0859289"}}}


id: GO:0010343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death induced by singlet oxygen. Programmed cell death is the cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["PMID:17075038","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death in response to reactive oxygen species","termid":"GO:0097468"},{"relation_name":"part_of","term_name":"cellular response to singlet oxygen","termid":"GO:0071452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"singlet oxygen-mediated programmed cell death","synonyms":[{"name":"light-dependent programmed cell death","type":"broad"},{"name":"programmed cell death in response to singlet oxygen","type":"exact"}],"termid":"GO:0010343"}


id: PBO:0088170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1","termid":"PBO:0088170"}


id: PBO:0053147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 3","termid":"PBO:0053147"}


id: FYPO:0005218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H2A measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone H2A in cell","synonyms":[{"name":"decreased accumulation of histone H2A in cell","type":"related"},{"name":"decreased cellular histone H2A level","type":"exact"},{"name":"decreased histone H2A level during vegetative growth","type":"exact"},{"name":"decreased level of histone H2A in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H2A in cell during vegetative growth","type":"exact"},{"name":"reduced level of histone H2A in cell","type":"exact"}],"termid":"FYPO:0005218"}


id: PBO:0084787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; forms a heterodimer complex with Mto1p that performs the 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; similar to human GTPBP3","termid":"PBO:0084787"}


id: MONDO:0014770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CEP104 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 25","secondary_identifiers":["MEDGEN:895764","OMIM:616781","DOID:0110994","GARD:16159","UMLS:C4084842"],"synonyms":[{"name":"CEP104 Joubert syndrome","type":"exact"},{"name":"JBTS25","type":"exact"},{"name":"Joubert syndrome 25","type":"exact"},{"name":"Joubert syndrome caused by mutation in CEP104","type":"exact"},{"name":"Joubert syndrome type 25","type":"exact"}],"termid":"MONDO:0014770","xrefs":{"Monarch":{"xref_id":"0014770"}}}


id: FYPO:0001930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to gamma radiation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to gamma radiation","synonyms":[{"name":"abnormal cellular response to gamma radiation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"abnormal sensitivity to gamma radiation","type":"exact"}],"termid":"FYPO:0001930"}


id: GO:0031951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid metabolic process","termid":"GO:0031945"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid catabolic process","termid":"GO:0031949"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"positively_regulates","term_name":"glucocorticoid catabolic process","termid":"GO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of glucocorticoid catabolic process","synonyms":[{"name":"activation of glucocorticoid catabolic process","type":"narrow"},{"name":"stimulation of glucocorticoid catabolic process","type":"narrow"},{"name":"up regulation of glucocorticoid catabolic process","type":"exact"},{"name":"up-regulation of glucocorticoid catabolic process","type":"exact"},{"name":"upregulation of glucocorticoid catabolic process","type":"exact"}],"termid":"GO:0031951"}


id: PBO:0062017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 8","termid":"PBO:0062017"}


id: PBO:0117395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p25","termid":"PBO:0117395"}


id: PBO:0070234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 172 pseudogene","termid":"PBO:0070234"}


id: PBO:0028132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028132"}


id: PBO:0042565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN1A antisense RNA 1","termid":"PBO:0042565"}


id: PBO:0089739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS complex subunit Vac7","termid":"PBO:0089739"}


id: GO:1990432
data:
  {"annotated_genes":["SJAG_01836","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71531,118398],"is_not":false,"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"The process of forming the mature 3' end of a siRNA molecule.","definition_xrefs":["PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_02621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"siRNA 3' end processing","type":"exact"},{"name":"small interfering RNA 3'-end processing","type":"exact"}],"termid":"GO:1990432","terms_by_termid":{"GO:1990432":null}}


id: PBO:0046558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group I member 1","termid":"PBO:0046558"}


id: MONDO:0015156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete typhus-group rickettsiosis (obsolete MONDO:0015156)","termid":"MONDO:0015156","xrefs":{"Monarch":{"xref_id":"0015156"}}}


id: MONDO:0859239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Chilton-Okur-Chung neurodevelopmental syndrome","secondary_identifiers":["OMIM:619841","UMLS:C5677022","MEDGEN:1803276"],"termid":"MONDO:0859239","xrefs":{"Monarch":{"xref_id":"0859239"}}}


id: MONDO:0100391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(2;12). (A cytogenetic abnormality that involves a translocation between chromosomes 2 and 12.)","definition_xrefs":["NCIT:C173543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(2;12)","synonyms":[{"name":"AML, t(2;12)","type":"exact"}],"termid":"MONDO:0100391","xrefs":{"Monarch":{"xref_id":"0100391"}}}


id: PBO:0028976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_GSNO","termid":"PBO:0028976"}


id: PBO:0040753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bradykinin receptor B2","termid":"PBO:0040753"}


id: PBO:0005794
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis","termid":"PBO:0005794"}


id: GO:0071879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenylate cyclase-activating adrenergic receptor protein signaling pathway. An adrenergic receptor signaling pathway is the series of molecular signals generated as a consequence of an adrenergic receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"positively_regulates","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"positive regulation of adrenergic receptor signaling pathway","type":"broad"},{"name":"positive regulation of adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071879"}


id: PBO:0055628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3067","termid":"PBO:0055628"}


id: FYPO:0001522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on caffeine","synonyms":[{"name":"normal cell population growth in presence of caffeine","type":"exact"},{"name":"normal cell population growth on caffeine","type":"exact"},{"name":"normal cellular response to caffeine","type":"related"},{"name":"normal vegetative cell population growth on caffeine","type":"exact"}],"termid":"FYPO:0001522"}


id: GO:0032007
data:
  {"annotated_genes":["SJAG_03089","SJAG_04910","SJAG_00824","SJAG_00289","SJAG_00875","SJAG_05346","SJAG_02231","SJAG_00169","SJAG_03072","SJAG_04206","SJAG_03501","SJAG_00991","SJAG_00457","SJAG_04249","SJAG_03486","SJAG_03355","SJAG_01184","SJAG_03974","SJAG_01142","SJAG_03678","SJAG_02765","SJAG_00209","SJAG_01983","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73526],"is_not":false,"summary":null,"term":"GO:0032007"},{"annotations":[80294,109580,96430,73938,113465,117342,118340,116431,99202,118532,114282,114882,73959,88364,103328,107466,109983,93673,116783,99898,105455,101773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[116576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TOR signaling pathway","type":"exact"},{"name":"down-regulation of TOR signaling pathway","type":"exact"},{"name":"downregulation of TOR signaling pathway","type":"exact"},{"name":"inhibition of TOR signaling pathway","type":"narrow"},{"name":"negative regulation of TOR signaling cascade","type":"related"},{"name":"negative regulation of TOR signaling pathway","type":"exact"},{"name":"negative regulation of TOR signalling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0032007","terms_by_termid":{"GO:0032007":null,"GO:1903940":null,"GO:1904262":null}}


id: GO:0072759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a topoisomerase inhibitor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to topoisomerase inhibitor","termid":"GO:0072758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to topoisomerase inhibitor","termid":"GO:0072759"}


id: PBO:0014262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD17","termid":"PBO:0014262"}


id: PBO:0068446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 20, pseudogene","termid":"PBO:0068446"}


id: PBO:0039818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 2","termid":"PBO:0039818"}


id: PBO:0085047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein involved in pre-mRNA splicing; component of a complex containing Cef1p; has similarity to S. pombe Cwf15p","termid":"PBO:0085047"}


id: PBO:0108940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 19","termid":"PBO:0108940"}


id: GO:0007531
data:
  {"annotated_genes":["SJAG_00247","SJAG_02828","SJAG_01465","SJAG_01113","SJAG_02319","SJAG_01076","SJAG_02079","SJAG_01410","SJAG_02401","SJAG_00399","SJAG_01677","SJAG_03097","SJAG_00757","SJAG_01419","SJAG_06638","SJAG_01601","SJAG_03997","SJAG_03221","SJAG_02226","SJAG_01068","SJAG_05153","SJAG_02724","SJAG_02556","SJAG_00073","SJAG_01495","SJAG_05239","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107371,119388,119389],"is_not":false,"summary":null,"term":"GO:0007531"},{"annotations":[99444,88272,117147,119144],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[89633,115325,110613,106951,99445,111134,89505,108829,96508,100904,88273,119063,117100,97753,106392],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[99383,93018,96982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[94417,108830,103542,103272],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[93698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of mating type upon an individual. Mating types are the equivalent in microorganisms of the sexes in higher organisms.","definition_xrefs":["PMID:33313646","PMID:8274857","PMID:8785123","PMID:28916791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type determination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007531","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: MONDO:0004265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, usually bacterial infection affecting the endometrium. It is characterized by the presence of neutrophils or microabscesses in the endometrial glands. Symptoms include fever, lower abdominal pain, and vaginal discharge.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometritis","termid":"MONDO:0000918"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute endometritis","secondary_identifiers":["MEDGEN:68654","ICD9:615.0","DOID:7528","UMLS:C0238103","icd11.foundation:1197441046","NCIT:C27022","SCTID:67667007"],"synonyms":[{"name":"endometritis, acute","type":"exact"}],"termid":"MONDO:0004265","xrefs":{"Monarch":{"xref_id":"0004265"}}}


id: PBO:0085631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in fluoride export; nearly identical to FEX2, and deletion of both proteins results in a large increase in fluoride sensitivity compared with the single mutant; contains two FEX domains connected by a linker; part of a widespread family of conserved fluoride export proteins","termid":"PBO:0085631"}


id: PBO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase B","termid":"PBO:0051702"}


id: PBO:0085667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0085667"}


id: MONDO:0011581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardioectodermal syndrome that is often associated with the gene DSP, encoding desmoplakin. Desmoplakin is a member of the plakin family of cell adhesion molecules that are responsible for the formation and maintenance of desmosomes. Variation in DSP is associated with cardiomyopathic manifestations that include: (1) seemingly isolated arrhythmogenic right ventricle cardiomyopathy (ARVC) that is atypical and can show left ventricle dominance, or be present in the left and right ventricle simultaneously; and (2) dilated cardiomyopathy. Cutaneous phenotypes including wooly hair and/or keratoderma can present along with the cardiomyopathy, but are noted as less penetrant features.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with wooly hair (obsolete MONDO:0018558)","termid":"MONDO:0018558"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"cardioectodermal syndrome","termid":"MONDO:0100080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","secondary_identifiers":["MEDGEN:340124","Orphanet:65282","MESH:C535581","OMIM:605676","DOID:0090128","GARD:5595","SCTID:719835006","UMLS:C1854063"],"synonyms":[{"name":"Carvajal syndrome","type":"exact"},{"name":"DCWHK","type":"exact"},{"name":"KWWH type II","type":"exact"},{"name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","type":"exact"},{"name":"cardiomyopathy dilated with woolly hair and keratoderma","type":"related"},{"name":"cardiomyopathy dilated with wooly hair and keratoderma","type":"related"},{"name":"cardiomyopathy, dilated, with woolly hair and keratoderma","type":"related"},{"name":"cardiomyopathy, dilated, with wooly hair and keratoderma","type":"related"},{"name":"dilated cardiomyopathy with woolly hair and keratoderma","type":"exact"},{"name":"dilated cardiomyopathy with wooly hair and keratoderma","type":"exact"},{"name":"epidermolytic palmoplantar keratoderma woolly hair and dilated cardiomyopathy","type":"related"},{"name":"epidermolytic palmoplantar keratoderma wooly hair and dilated cardiomyopathy","type":"related"},{"name":"keratoderma with woolly hair type II","type":"exact"},{"name":"keratoderma with wooly hair type II","type":"exact"},{"name":"palmoplantar keratoderma with left ventricular cardiomyopathy and woolly hair","type":"exact"},{"name":"palmoplantar keratoderma with left ventricular cardiomyopathy and wooly hair","type":"exact"},{"name":"woolly hair - palmoplantar keratoderma - dilated cardiomyopathy","type":"related"},{"name":"woolly hair - palmoplantar keratoderma - dilated cardiomyopathy syndrome","type":"related"},{"name":"woolly hair-palmoplantar hyperkeratosis-dilated cardiomyopathy syndrome","type":"exact"},{"name":"woolly hair-palmoplantar keratoderma-dilated cardiomyopathy syndrome","type":"exact"},{"name":"wooly hair - palmoplantar keratoderma - dilated cardiomyopathy","type":"related"},{"name":"wooly hair - palmoplantar keratoderma - dilated cardiomyopathy syndrome","type":"related"},{"name":"wooly hair-palmoplantar hyperkeratosis-dilated cardiomyopathy syndrome","type":"exact"},{"name":"wooly hair-palmoplantar keratoderma-dilated cardiomyopathy syndrome","type":"exact"}],"termid":"MONDO:0011581","xrefs":{"Monarch":{"xref_id":"0011581"}}}


id: MONDO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with combined immunodeficiency (obsolete MONDO:0018035)","secondary_identifiers":["Orphanet:331217","NANDO:2100203"],"termid":"MONDO:0018035","xrefs":{"Monarch":{"xref_id":"0018035"}}}


id: SO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_RNA_chromosome","synonyms":[{"name":"circular single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000966"}


id: PBO:0083639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF4E-associated protein, competes with eIF4G for binding to eIF4E; accelerates mRNA degradation by promoting decapping, facilitated by interaction with eIF4E; essential for Puf5p mediated repression; associates with Puf5p and Dhh1p; inhibits cap-dependent translation; functions independently of eIF4E to maintain genetic stability; plays a role in cell growth, implicated in the TOR signaling cascade","termid":"PBO:0083639"}


id: PBO:0089811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Swc3","termid":"PBO:0089811"}


id: MONDO:0011444
data:
  {"annotated_genes":["SJAG_04522","SJAG_02278","SJAG_01114","SJAG_04765"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85726,85727,85728,85729],"is_not":false,"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","definition":"Any Duane retraction syndrome in which the cause of the disease is a mutation in the CHN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Duane retraction syndrome","termid":"MONDO:0007473"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:196721","UMLS:C0751083","OMIM:604356","SCTID:128083007","GARD:9966"],"synonyms":[{"name":"CHN1 Duane retraction syndrome","type":"exact"},{"name":"DURS2","type":"related"},{"name":"Duane retraction syndrome 2","type":"exact"},{"name":"Duane retraction syndrome caused by mutation in CHN1","type":"exact"},{"name":"Duane retraction syndrome type 2","type":"exact"},{"name":"Duane syndrome type 2","type":"related"}],"termid":"MONDO:0011444","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0011444"}}}


id: MONDO:0000208
data:
  {"annotated_genes":["SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87229],"is_not":false,"summary":null,"term":"MONDO:0000208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary microcephaly-mild intellectual disability-young-onset diabetes syndrome","termid":"MONDO:0018320"},{"relation_name":"is_a","term_name":"microcephaly, short stature, and impaired glucose metabolism","termid":"MONDO:0800450"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04993":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, short stature, and impaired glucose metabolism 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18459","UMLS:C4014997","OMIM:616033","MEDGEN:863434"],"synonyms":[{"name":"MSSGM","type":"related"},{"name":"MSSGM1","type":"exact"},{"name":"microcephaly, short stature, and impaired glucose metabolism","type":"related"},{"name":"microcephaly, short stature, and impaired glucose metabolism 1","type":"exact"}],"termid":"MONDO:0000208","terms_by_termid":{"MONDO:0000208":null},"xrefs":{"Monarch":{"xref_id":"0000208"}}}


id: GO:2000234
data:
  {"annotated_genes":["SJAG_01764","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75782,78314],"is_not":false,"summary":null,"term":"GO:2000234"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of rRNA processing","termid":"GO:2000232"},{"relation_name":"positively_regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01764":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of rRNA processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"positive regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000234","terms_by_termid":{"GO:2000234":null}}


id: GO:1902645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tertiary alcohol.","definition_xrefs":["PMID:11288200","GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tertiary alcohol biosynthetic process","synonyms":[{"name":"tertiary alcohol anabolism","type":"exact"},{"name":"tertiary alcohol biosynthesis","type":"exact"},{"name":"tertiary alcohol formation","type":"exact"},{"name":"tertiary alcohol synthesis","type":"exact"}],"termid":"GO:1902645"}


id: PBO:0005621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin synthase","termid":"PBO:0005621"}


id: PR:Q9P3W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tel2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint protein tel2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.03","synonyms":[{"name":"Spom972h-tel2","type":"exact"}],"termid":"PR:Q9P3W5"}


id: PBO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 1","termid":"PBO:0042897"}


id: GO:1901431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cycloalkane","termid":"GO:1901431"}


id: MONDO:0007063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A adamantinoma that involves the long bone.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete long bone adamantinoma (obsolete MONDO:0007063)","termid":"MONDO:0007063","xrefs":{"Monarch":{"xref_id":"0007063"}}}


id: GO:1900264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"activation of DNA duplicase activity","type":"exact"},{"name":"activation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of DNA polymerase I","type":"narrow"},{"name":"activation of DNA polymerase II","type":"narrow"},{"name":"activation of DNA polymerase III","type":"narrow"},{"name":"activation of DNA polymerase V activity","type":"narrow"},{"name":"activation of DNA polymerase alpha","type":"narrow"},{"name":"activation of DNA polymerase beta","type":"narrow"},{"name":"activation of DNA polymerase gamma","type":"narrow"},{"name":"activation of DNA replicase activity","type":"exact"},{"name":"activation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of Klenow fragment","type":"narrow"},{"name":"activation of Taq DNA polymerase","type":"narrow"},{"name":"activation of Taq Pol I","type":"narrow"},{"name":"activation of Tca DNA polymerase","type":"narrow"},{"name":"activation of alpha DNA polymerase activity","type":"narrow"},{"name":"activation of beta DNA polymerase activity","type":"narrow"},{"name":"activation of delta DNA polymerase activity","type":"narrow"},{"name":"activation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"activation of duplicase","type":"broad"},{"name":"activation of epsilon DNA polymerase activity","type":"narrow"},{"name":"activation of eta DNA polymerase activity","type":"narrow"},{"name":"activation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of iota DNA polymerase activity","type":"narrow"},{"name":"activation of kappa DNA polymerase activity","type":"narrow"},{"name":"activation of lambda DNA polymerase activity","type":"narrow"},{"name":"activation of mu DNA polymerase activity","type":"narrow"},{"name":"activation of nu DNA polymerase activity","type":"narrow"},{"name":"activation of sequenase","type":"related"},{"name":"activation of sigma DNA polymerase activity","type":"narrow"},{"name":"activation of theta DNA polymerase activity","type":"narrow"},{"name":"activation of zeta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of DNA duplicase activity","type":"exact"},{"name":"positive regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of DNA polymerase I","type":"narrow"},{"name":"positive regulation of DNA polymerase II","type":"narrow"},{"name":"positive regulation of DNA polymerase III","type":"narrow"},{"name":"positive regulation of DNA polymerase V activity","type":"narrow"},{"name":"positive regulation of DNA polymerase alpha","type":"narrow"},{"name":"positive regulation of DNA polymerase beta","type":"narrow"},{"name":"positive regulation of DNA polymerase gamma","type":"narrow"},{"name":"positive regulation of DNA replicase activity","type":"exact"},{"name":"positive regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"positive regulation of Klenow fragment","type":"narrow"},{"name":"positive regulation of Taq DNA polymerase","type":"narrow"},{"name":"positive regulation of Taq Pol I","type":"narrow"},{"name":"positive regulation of Tca DNA polymerase","type":"narrow"},{"name":"positive regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"positive regulation of beta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of delta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"positive regulation of duplicase","type":"broad"},{"name":"positive regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"positive regulation of eta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"positive regulation of iota DNA polymerase activity","type":"narrow"},{"name":"positive regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"positive regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"positive regulation of mu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of nu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of sequenase","type":"related"},{"name":"positive regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"positive regulation of theta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up regulation of DNA duplicase activity","type":"exact"},{"name":"up regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of DNA polymerase I","type":"narrow"},{"name":"up regulation of DNA polymerase II","type":"narrow"},{"name":"up regulation of DNA polymerase III","type":"narrow"},{"name":"up regulation of DNA polymerase V activity","type":"narrow"},{"name":"up regulation of DNA polymerase alpha","type":"narrow"},{"name":"up regulation of DNA polymerase beta","type":"narrow"},{"name":"up regulation of DNA polymerase gamma","type":"narrow"},{"name":"up regulation of DNA replicase activity","type":"exact"},{"name":"up regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up regulation of Klenow fragment","type":"narrow"},{"name":"up regulation of Taq DNA polymerase","type":"narrow"},{"name":"up regulation of Taq Pol I","type":"narrow"},{"name":"up regulation of Tca DNA polymerase","type":"narrow"},{"name":"up regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up regulation of duplicase","type":"broad"},{"name":"up regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up regulation of sequenase","type":"related"},{"name":"up regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of DNA duplicase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of DNA polymerase I","type":"narrow"},{"name":"up-regulation of DNA polymerase II","type":"narrow"},{"name":"up-regulation of DNA polymerase III","type":"narrow"},{"name":"up-regulation of DNA polymerase V activity","type":"narrow"},{"name":"up-regulation of DNA polymerase alpha","type":"narrow"},{"name":"up-regulation of DNA polymerase beta","type":"narrow"},{"name":"up-regulation of DNA polymerase gamma","type":"narrow"},{"name":"up-regulation of DNA replicase activity","type":"exact"},{"name":"up-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up-regulation of Klenow fragment","type":"narrow"},{"name":"up-regulation of Taq DNA polymerase","type":"narrow"},{"name":"up-regulation of Taq Pol I","type":"narrow"},{"name":"up-regulation of Tca DNA polymerase","type":"narrow"},{"name":"up-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up-regulation of duplicase","type":"broad"},{"name":"up-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of sequenase","type":"related"},{"name":"up-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"upregulation of DNA duplicase activity","type":"exact"},{"name":"upregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of DNA polymerase I","type":"narrow"},{"name":"upregulation of DNA polymerase II","type":"narrow"},{"name":"upregulation of DNA polymerase III","type":"narrow"},{"name":"upregulation of DNA polymerase V activity","type":"narrow"},{"name":"upregulation of DNA polymerase alpha","type":"narrow"},{"name":"upregulation of DNA polymerase beta","type":"narrow"},{"name":"upregulation of DNA polymerase gamma","type":"narrow"},{"name":"upregulation of DNA replicase activity","type":"exact"},{"name":"upregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"upregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"upregulation of Klenow fragment","type":"narrow"},{"name":"upregulation of Taq DNA polymerase","type":"narrow"},{"name":"upregulation of Taq Pol I","type":"narrow"},{"name":"upregulation of Tca DNA polymerase","type":"narrow"},{"name":"upregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"upregulation of beta DNA polymerase activity","type":"narrow"},{"name":"upregulation of delta DNA polymerase activity","type":"narrow"},{"name":"upregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"upregulation of duplicase","type":"broad"},{"name":"upregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"upregulation of eta DNA polymerase activity","type":"narrow"},{"name":"upregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"upregulation of iota DNA polymerase activity","type":"narrow"},{"name":"upregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"upregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"upregulation of mu DNA polymerase activity","type":"narrow"},{"name":"upregulation of nu DNA polymerase activity","type":"narrow"},{"name":"upregulation of sequenase","type":"related"},{"name":"upregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"upregulation of theta DNA polymerase activity","type":"narrow"},{"name":"upregulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900264"}


id: FYPO:0001528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GTP binding","termid":"FYPO:0001528"}


id: FYPO:0005712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Cutin-1 (N-carbamoyl-2-(triphenyl-lambda-5-phosphanylidene)acetamide). Cells stop growing (and may die) at a concentration of Cutin-1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to Cutin-1","synonyms":[{"name":"hypersensitive to Cutin-1","type":"exact"},{"name":"sensitive to Cutin-1 during mitotic cell cycle","type":"related"},{"name":"sensitive to Cutin-1 during vegetative growth","type":"exact"},{"name":"sensitive to N-carbamoyl-2-(triphenyl-lambda-5-phosphanylidene)acetamide","type":"exact"}],"termid":"FYPO:0005712"}


id: PBO:0060548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX dehydratase","termid":"PBO:0060548"}


id: PBO:0116603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 4 (gene/pseudogene)","termid":"PBO:0116603"}


id: PBO:0056521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound transcription factor peptidase, site 1","termid":"PBO:0056521"}


id: PBO:0051074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5/OR15-5B (non-functional)","termid":"PBO:0051074"}


id: MONDO:1012298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"displaced abomasum, non-human animal","termid":"MONDO:1011663"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced abomasum, water buffalo","secondary_identifiers":["OMIA:001119-89462"],"termid":"MONDO:1012298","xrefs":{"Monarch":{"xref_id":"1012298"}}}


id: GO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-carboxyhexanoyl-[ACP] methyl ester + H2O = 6-carboxyhexanoyl-[ACP] + H+ + methanol.","definition_xrefs":["PMID:23045647","RHEA:42700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"pimelyl-[acyl-carrier protein] methyl ester esterase activity","secondary_identifiers":["EC:3.1.1.85","MetaCyc:RXN-11483"],"synonyms":[{"name":"pimelyl-[acyl-carrier protein] methyl ester hydrolase activity","type":"related"}],"termid":"GO:0090499"}


id: GO:0005832
data:
  {"annotated_genes":["SJAG_03320","SJAG_04121","SJAG_00609","SJAG_01002","SJAG_00447","SJAG_03570","SJAG_02926","SJAG_02378"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70135,73065,74016,76573,77024,78425,78523,80149],"is_not":false,"summary":null,"term":"GO:0005832"}]},"cv_name":"cellular_component","definition":"A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor.","definition_xrefs":["PMID:11580267","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_02378":null,"SJAG_02926":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04121":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"chaperonin-containing T-complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CCT particle","type":"exact"},{"name":"TriC","type":"exact"}],"termid":"GO:0005832","terms_by_termid":{"GO:0005832":null}}


id: GO:0031294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B- or T cell receptor to augment B- or T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte costimulation","synonyms":[{"name":"lymphocyte co-stimulation","type":"exact"}],"termid":"GO:0031294"}


id: PBO:0029164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation","termid":"PBO:0029164"}


id: FYPO:0000892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000892"}


id: GO:0008327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a methylated cytosine/guanine dinucleotide.","definition_xrefs":["PMID:11746232","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"methyl-CpG binding","termid":"GO:0008327"}


id: PBO:0011983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialr to S. pombe SPBC12C2.03c (paralog)","termid":"PBO:0011983"}


id: FYPO:0003245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the daughter nuclei formed by mitosis cluster in the middle of the cell during telophase. Normally, daughter nuclei move away from the cell division site during mitotic telophase.","definition_xrefs":["PMID:23087209","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"},{"relation_name":"output_of","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"telophase nuclear clustering","synonyms":[{"name":"daughter nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"kissing nuclei","type":"exact"},{"name":"nuclear clustering during mitotic telophase","type":"exact"},{"name":"nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"telophase nuclear clustering during vegetative growth","type":"related"}],"termid":"FYPO:0003245"}


id: MONDO:0859256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with language delay and seizures","secondary_identifiers":["DOID:0070444","MEDGEN:1805816","OMIM:619908","UMLS:C5676998"],"termid":"MONDO:0859256","xrefs":{"Monarch":{"xref_id":"0859256"}}}


id: GO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals) and an RSF1 homolog. It mediates nucleosome deposition and generates regularly spaced nucleosome arrays. In mammals, RSF is involved in regulation of transcription from RNA polymerase II promoters).","definition_xrefs":["PMID:12972596","PMID:16568949","PMID:15284901","PMID:21810179","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"RSF complex","synonyms":[{"name":"remodeling and spacing factor complex","type":"exact"}],"termid":"GO:0031213"}


id: PBO:0030843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_during_cellular_response_to_caffeine","termid":"PBO:0030843"}


id: PBO:0075549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 1","termid":"PBO:0075549"}


id: PBO:0036169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_methylation_during_vegetative_growth","termid":"PBO:0036169"}


id: PBO:0070143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 57 pseudogene","termid":"PBO:0070143"}


id: MONDO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, usually polypoid neoplasm that arises from the cervix. It is characterized by the presence of a glandular component and a smooth muscle cell component. Variants include the endocervical type, endometrial type, and atypical polypoid adenomyoma.","definition_xrefs":["NCIT:C40231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical adenomyoma","secondary_identifiers":["UMLS:C1516404","DOID:4995","MEDGEN:275705"],"synonyms":[{"name":"cervical adenomyoma","type":"exact"}],"termid":"MONDO:0003238","xrefs":{"Monarch":{"xref_id":"0003238"}}}


id: PBO:0043422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornifelin","termid":"PBO:0043422"}


id: MONDO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb duplication, polydactyly, syndactyly, and/or hyperphalangy (obsolete MONDO:0017434)","secondary_identifiers":["Orphanet:294959","icd11.foundation:1911144861"],"termid":"MONDO:0017434","xrefs":{"Monarch":{"xref_id":"0017434"}}}


id: MONDO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the pharynx.","definition_xrefs":["NCIT:C7545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"},{"relation_name":"is_a","term_name":"malignant tumor of neck","termid":"MONDO:0021310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pharynx cancer","secondary_identifiers":["MESH:D010610","UMLS:C0153405","MEDGEN:57554","DOID:0060119","EFO:0005577"],"synonyms":[{"name":"cancer of chordate pharynx","type":"exact"},{"name":"cancer of pharynx","type":"exact"},{"name":"chordate pharynx cancer","type":"exact"},{"name":"malignant chordate pharynx neoplasm","type":"exact"},{"name":"malignant neoplasm of chordate pharynx","type":"exact"},{"name":"malignant neoplasm of pharynx","type":"exact"},{"name":"malignant pharyngeal neoplasm","type":"exact"},{"name":"malignant pharyngeal tumor","type":"exact"},{"name":"malignant pharyngeal tumour","type":"exact"},{"name":"malignant pharynx neoplasm","type":"exact"},{"name":"malignant pharynx tumor","type":"exact"},{"name":"malignant pharynx tumour","type":"exact"},{"name":"malignant tumor of pharynx","type":"exact"},{"name":"malignant tumor of the pharynx","type":"exact"},{"name":"malignant tumour of pharynx","type":"exact"},{"name":"malignant tumour of the pharynx","type":"exact"},{"name":"pharyngeal cancer","type":"related"},{"name":"pharyngeal neoplasm","type":"exact"},{"name":"pharynx cancer","type":"exact"},{"name":"pharynx neoplasm","type":"broad"}],"termid":"MONDO:0005517","xrefs":{"Monarch":{"xref_id":"0005517"}}}


id: PBO:0053698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 899","termid":"PBO:0053698"}


id: PBO:0066010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY antisense RNA 1","termid":"PBO:0066010"}


id: PBO:0060092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 39","termid":"PBO:0060092"}


id: PBO:0005488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B Htb1","termid":"PBO:0005488"}


id: GO:0051263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of serine to N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine as found in microcin E492 produced from the mceA gene in plasmid pJAM229 of the E. coli VCS257 strain and the K. pneumoniae RYC492 strain.","definition_xrefs":["RESID:AA0374"],"gene_count":0,"genotype_count":0,"name":"obsolete microcin E492 biosynthetic process by siderophore ester modification of peptidyl-serine (obsolete GO:0051263)","synonyms":[{"name":"microcin E492 anabolism by siderophore ester modification of peptidyl-serine","type":"exact"},{"name":"microcin E492 formation by siderophore ester modification of peptidyl-serine","type":"exact"},{"name":"microcin E492 synthesis by siderophore ester modification of peptidyl-serine","type":"exact"}],"termid":"GO:0051263"}


id: GO:0060960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac neuron differentiation","termid":"GO:0060945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron fate commitment","synonyms":[{"name":"heart neuron fate commitment","type":"exact"}],"termid":"GO:0060960"}


id: PBO:0049062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR75-ASB3 readthrough","termid":"PBO:0049062"}


id: PR:Q9URZ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cat1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.11","synonyms":[{"name":"Spom972h-cat1","type":"exact"}],"termid":"PR:Q9URZ4"}


id: GO:1903047
data:
  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