# terms

id: PBO:0061841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoglycin","termid":"PBO:0061841"}


id: MONDO:1012391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"necrotizing meningoencephalitis, non-human animal","termid":"MONDO:1011879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing meningoencephalitis, dog","secondary_identifiers":["OMIA:001470-9615"],"termid":"MONDO:1012391","xrefs":{"Monarch":{"xref_id":"1012391"}}}


id: MONDO:0010408
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87088],"is_not":false,"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"This syndrome is characterized by the association of toe syndactyly, facial dysmorphism including telecanthus (abnormal distance between the eyes) and a broad nasal tip, urogenital malformations and anal atresia.","definition_xrefs":["Orphanet:140952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"syndactyly-telecanthus-anogenital and renal malformations syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:723581006","UMLS:C2678045","DOID:0111931","OMIM:300707","GARD:10295","MEDGEN:394424","MESH:C567475"],"synonyms":[{"name":"STAR","type":"related"},{"name":"STAR syndrome","type":"exact"},{"name":"STAR syndrome, X-linked dominant","type":"exact"},{"name":"Star syndrome","type":"related"},{"name":"syndactyly with renal and anogenital malformations","type":"related"},{"name":"syndactyly, telecanthus, anogenital and renal malformations","type":"related"},{"name":"syndactyly-telecanthus-anogenital and renal malformations syndrome","type":"exact"},{"name":"toe syndactyly, telecanthus, and anogenital and renal malformations","type":"related"},{"name":"toe syndactyly, telecanthus, anogenital and renal malformations","type":"related"}],"termid":"MONDO:0010408","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0010408"}}}


id: MONDO:0800423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 4","secondary_identifiers":["MEDGEN:394248","UMLS:C2677290"],"synonyms":[{"name":"CRCS4","type":"exact"}],"termid":"MONDO:0800423","xrefs":{"Monarch":{"xref_id":"0800423"}}}


id: PBO:0089845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26","termid":"PBO:0089845"}


id: GO:0000915
data:
  {"annotated_genes":["SJAG_00268","SJAG_02431","SJAG_04703","SJAG_04887","SJAG_04930","SJAG_01943","SJAG_03045","SJAG_00279","SJAG_01143","SJAG_03025","SJAG_01894","SJAG_03703","SJAG_02592","SJAG_00938","SJAG_02795","SJAG_00082","SJAG_02700","SJAG_01805","SJAG_04597","SJAG_04621","SJAG_03048","SJAG_01732","SJAG_00228","SJAG_00700","SJAG_04498","SJAG_02864","SJAG_04982","SJAG_04077","SJAG_03596","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111112],"is_not":false,"summary":null,"term":"GO:0000915"},{"annotations":[89668,98355,98613,108447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[98052,102739,118764,119906,92881,97977,99225,102882,88601,72901,92931,112613,112178,95621,118179,98248,75942,76705,75291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77785],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98602],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[102684],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90339,94747],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[119676,94149],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"The process of assembly of a ring composed of actin, myosin, and associated proteins that will function in cytokinesis.","definition_xrefs":["GOC:dph","GOC:clt","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"actomyosin contractile ring organization","termid":"GO:0044837"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"secondary_identifiers":["GO:2000708","GO:0045573"],"synonyms":[{"name":"constriction ring assembly","type":"narrow"},{"name":"contractile ring assembly","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"cytokinesis, actomyosin ring formation","type":"related"},{"name":"cytokinesis, contractile ring assembly","type":"related"},{"name":"myosin filament organisation involved in cytokinetic actomyosin contractile ring assembly","type":"related"},{"name":"myosin filament organization involved in cytokinetic actomyosin contractile ring assembly","type":"related"},{"name":"myosin filament organization of constriction ring assembly","type":"related"},{"name":"myosin filament organization of contractile ring assembly","type":"related"}],"termid":"GO:0000915","terms_by_termid":{"GO:0000915":null,"GO:0071520":null,"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: FYPO:0006904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression until the cell reaches a certain size.","definition_xrefs":["GO:0031567","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000298","FYPO:0000257","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell size control checkpoint","synonyms":[{"name":"normal cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006904"}


id: MONDO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A atherosclerosis that involves the renal artery.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic atherosclerosis","termid":"MONDO:0000980"},{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal artery atheroma","secondary_identifiers":["MEDGEN:510062","ICD9:440.1","UMLS:C0155734","DOID:14092","SCTID:45281005","ICD10CM:I70.1"],"synonyms":[{"name":"atherosclerosis of renal artery","type":"exact"},{"name":"renal artery atherosclerosis","type":"exact"},{"name":"renal atherosclerosis","type":"exact"}],"termid":"MONDO:0001876","xrefs":{"Monarch":{"xref_id":"0001876"}}}


id: PBO:0068413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 2","termid":"PBO:0068413"}


id: GO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["EC:3.6.3.21","TC:3.A.1.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine/arginine/lysine/ornithine porter activity (obsolete GO:0015597)","synonyms":[{"name":"histidine/arginine/lysine/ornithine porter activity","type":"exact"}],"termid":"GO:0015597"}


id: PBO:0051599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 subunit alpha","termid":"PBO:0051599"}


id: MONDO:1011415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, non-human animal","secondary_identifiers":["OMIA:000037"],"termid":"MONDO:1011415","xrefs":{"Monarch":{"xref_id":"1011415"}}}


id: GO:1904807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein oxidation.","definition_xrefs":["GOC:TermGenie","PMID:22719267","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein oxidation","termid":"GO:1904806"},{"relation_name":"negatively_regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein oxidation","synonyms":[{"name":"down regulation of protein amino acid oxidation","type":"exact"},{"name":"down regulation of protein oxidation","type":"exact"},{"name":"down-regulation of protein amino acid oxidation","type":"exact"},{"name":"down-regulation of protein oxidation","type":"exact"},{"name":"downregulation of protein amino acid oxidation","type":"exact"},{"name":"downregulation of protein oxidation","type":"exact"},{"name":"inhibition of protein amino acid oxidation","type":"narrow"},{"name":"inhibition of protein oxidation","type":"narrow"},{"name":"negative regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904807"}


id: MOD:00717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a methylated phenylalanine, such as N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated phenylalanine","synonyms":[{"name":"MePhe","type":"exact"}],"termid":"MOD:00717"}


id: GO:0070962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070961"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"activation of neutrophil mediated killing of bacterium","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of bacterium","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"upregulation of neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070962"}


id: PBO:0057649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-2","termid":"PBO:0057649"}


id: GO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the hydrogenosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"hydrogenosome","termid":"GO:0042566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"hydrogenosome lumen","termid":"GO:0034492"}


id: PBO:0050262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 40","termid":"PBO:0050262"}


id: MONDO:0017424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic brachydactyly","secondary_identifiers":["Orphanet:294937"],"synonyms":[{"name":"brachydactyly","type":"related"},{"name":"isolated brachydactyly","type":"related"},{"name":"nonsyndromic brachydactyly","type":"exact"}],"termid":"MONDO:0017424","xrefs":{"Monarch":{"xref_id":"0017424"}}}


id: GO:2000657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein binding.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apolipoprotein binding","termid":"GO:2000657"}


id: MONDO:0008419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 1","secondary_identifiers":["OMIM:181800","MEDGEN:438003","UMLS:C2700406"],"synonyms":[{"name":"IS1","type":"exact"},{"name":"adolescent idiopathic scoliosis","type":"related"},{"name":"adolescent isolated scoliosis","type":"related"},{"name":"scoliosis, idiopathic 1","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0008419","xrefs":{"Monarch":{"xref_id":"0008419"}}}


id: PBO:0091372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER zinc importer, CDF family, Zhf1","termid":"PBO:0091372"}


id: PBO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_torin1","termid":"PBO:0029142"}


id: GO:0062167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex composed of six subunits of each of the three homologous polypeptide chains C1QA, C1QB, and C1QB. It is a subunit of the complement C1 complex. In addition to complement activation, C1q appears to have roles in homeostasis and cellular development, superoxide (O2-) production by neutrophils, blood coagulation and neurological synapse pruning.","definition_xrefs":["PMID:29449492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"complement component C1q complex","synonyms":[{"name":"C1q","type":"exact"},{"name":"Complement 1q","type":"exact"}],"termid":"GO:0062167"}


id: GO:0045781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell budding","termid":"GO:0007116"},{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell budding","synonyms":[{"name":"down regulation of cell budding","type":"exact"},{"name":"down-regulation of cell budding","type":"exact"},{"name":"downregulation of cell budding","type":"exact"},{"name":"inhibition of cell budding","type":"narrow"},{"name":"negative regulation of budding","type":"broad"}],"termid":"GO:0045781"}


id: GO:0033962
data:
  {"annotated_genes":["SJAG_03070","SJAG_02213","SJAG_03157","SJAG_03023","SJAG_03460","SJAG_04640","SJAG_02638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72118,73500,74680,76311,77003,92892,113194],"is_not":false,"summary":null,"term":"GO:0033962"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.","definition_xrefs":["GOC:mah","PMID:17429074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02213":null,"SJAG_02638":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03157":null,"SJAG_03460":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"P-body assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"P body assembly","type":"exact"},{"name":"P body biogenesis","type":"related"},{"name":"cytoplasmic mRNA processing body assembly","type":"exact"}],"termid":"GO:0033962","terms_by_termid":{"GO:0033962":null}}


id: MONDO:0006027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma (disease) that involves the breast.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast synovial sarcoma","synonyms":[{"name":"breast synovial sarcoma (disease)","type":"exact"}],"termid":"MONDO:0006027","xrefs":{"Monarch":{"xref_id":"0006027"}}}


id: PBO:0068822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 60, pseudogene","termid":"PBO:0068822"}


id: MONDO:0010366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 5","secondary_identifiers":["MESH:C564480","OMIM:300581","MEDGEN:336854","UMLS:C1845119"],"synonyms":[{"name":"FG syndrome 5","type":"exact"},{"name":"FGS5","type":"related"}],"termid":"MONDO:0010366","xrefs":{"Monarch":{"xref_id":"0010366"}}}


id: GO:0070310
data:
  {"annotated_genes":["SJAG_00429","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101178,106926],"is_not":false,"summary":null,"term":"GO:0070310"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the protein kinase ATR and ATR-interacting protein (ATRIP) and binds single-stranded DNA; ssDNA binding affinity is increased in the presence of replication protein A.","definition_xrefs":["GOC:mah","PMID:14724280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"ATR-ATRIP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mec1-Lcd1 complex","type":"narrow"},{"name":"Rad3-Rad26 complex","type":"narrow"}],"termid":"GO:0070310","terms_by_termid":{"GO:0070310":null}}


id: GO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidylglycine monooxygenase activity","secondary_identifiers":["RHEA:21452","MetaCyc:PEPTIDYLGLYCINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"PAM activity","type":"related"},{"name":"PAM-A","type":"related"},{"name":"PAM-B","type":"related"},{"name":"peptide alpha-amidating enzyme","type":"related"},{"name":"peptide alpha-amide synthase activity","type":"related"},{"name":"peptide-alpha-amide synthetase activity","type":"related"},{"name":"peptidyl alpha-amidating enzyme activity","type":"related"},{"name":"peptidylglycine 2-hydroxylase activity","type":"exact"},{"name":"peptidylglycine alpha-amidating monooxygenase activity","type":"related"},{"name":"peptidylglycine alpha-hydroxylase activity","type":"related"},{"name":"peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"synthase, peptide alpha-amide","type":"related"}],"termid":"GO:0004504"}


id: PBO:0077450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183A","termid":"PBO:0077450"}


id: GO:0051657
data:
  {"annotated_genes":["SJAG_00053","SJAG_04221","SJAG_01116","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104694,90749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[107346,115506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of organelle location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of organelle localization","type":"related"}],"termid":"GO:0051657","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: GO:0032952
data:
  {"annotated_genes":["SJAG_00610","SJAG_04659","SJAG_01787","SJAG_04666","SJAG_01255","SJAG_04668","SJAG_04462","SJAG_03705","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87862,92759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[103162,106240,92743,118209,118337,105668,91108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-beta-D-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"regulates","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of (1->3)-beta-D-glucan metabolism","type":"exact"},{"name":"regulation of 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"regulation of 1,3-beta-glucan metabolic process","type":"broad"},{"name":"regulation of 1,3-beta-glucan metabolism","type":"exact"}],"termid":"GO:0032952","terms_by_termid":{"GO:0090334":null,"GO:0140748":null}}


id: PBO:0070504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 3","termid":"PBO:0070504"}


id: GO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [elongation factor 2] = ADP + [elongation factor 2] phosphate.","definition_xrefs":["MetaCyc:2.7.11.20-RXN","EC:2.7.11.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium/calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"elongation factor-2 kinase activity","secondary_identifiers":["RHEA:21436"],"synonyms":[{"name":"ATP:elongation factor 2 phosphotransferase activity","type":"related"},{"name":"Ca/CaM-kinase III activity","type":"related"},{"name":"CaM kinase III activity","type":"related"},{"name":"EF2K","type":"related"},{"name":"STK19","type":"related"},{"name":"calmodulin-dependent protein kinase III activity","type":"related"},{"name":"eEF-2 kinase activity","type":"exact"},{"name":"eEF2 kinase activity","type":"related"},{"name":"eEF2K","type":"related"},{"name":"elongation factor 2 kinase activity","type":"related"},{"name":"eukaryotic elongation factor 2 kinase activity","type":"related"}],"termid":"GO:0004686"}


id: FYECO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Inorganic phosphate was excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate absent","termid":"FYECO:0000337"}


id: PR:O74543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A large neutral amino acids transporter small subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C777.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.04","secondary_identifiers":["UniProtKB:O74543"],"synonyms":[{"name":"Spom972h-SLC7A8","type":"exact"}],"termid":"PR:O74543"}


id: PR:Q9USM1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpn1302 gene.","definition_xrefs":["UniProtKB:Q9USM1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasomal ubiquitin receptor ADRM1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.16c","synonyms":[{"name":"Spom972h-rpn1302","type":"exact"}],"termid":"PR:Q9USM1"}


id: PBO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved transmembrane protein (predicted)","termid":"PBO:0031905"}


id: MONDO:0010069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylocostal dysostosis-anal and genitourinary malformations syndrome is characterized by the association of spondylocostal dysostosis with anal and genitourinary malformations (anal atresia and agenesis of external and internal genitalia). To date, only four cases have been described in the literature. Autosomal recessive inheritance has been suggested.","definition_xrefs":["Orphanet:94095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondylocostal dysostosis-anal and genitourinary malformations syndrome","secondary_identifiers":["MEDGEN:341373","MESH:C564799","OMIM:271520","UMLS:C1849069"],"synonyms":[{"name":"CMn syndrome","type":"related"},{"name":"Casamassima-Morton-Nance syndrome","type":"exact"},{"name":"spondylocostal dysostosis with anal atresia and urogenital anomalies","type":"related"},{"name":"spondylocostal dysostosis-anal atresia-genitourinary malformation syndrome","type":"related"}],"termid":"MONDO:0010069","xrefs":{"Monarch":{"xref_id":"0010069"}}}


id: PBO:0085930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial protein that physically interacts with Tim23p; null mutant displays reduced respiratory growth","termid":"PBO:0085930"}


id: PBO:0041391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 60","termid":"PBO:0041391"}


id: GO:0005395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + eye pigment precursor(in) = ADP + phosphate + eye pigment precursor(out).","definition_xrefs":["TC:3.A.1.204.1"],"gene_count":0,"genotype_count":0,"name":"obsolete eye pigment precursor transporter activity (obsolete GO:0005395)","termid":"GO:0005395"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: PBO:0066074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 2","termid":"PBO:0066074"}


id: GO:0071159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of a homo- or heterodimer of members of a family of structurally related proteins that contain a conserved N-terminal region called the Rel homology domain (RHD). In the nucleus, NF-kappaB complexes act as transcription factors. In unstimulated cells, NF-kappaB dimers are sequestered in the cytoplasm by IkappaB monomers; signals that induce NF-kappaB activity cause degradation of IkappaB, allowing NF-kappaB dimers to translocate to the nucleus and induce gene expression.","definition_xrefs":["ISBN:0849327946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"NF-kappaB complex","termid":"GO:0071159"}


id: PBO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3","termid":"PBO:0043326"}


id: GO:0007187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation or inhibition of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide.","definition_xrefs":["ISBN:0815316194","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","synonyms":[{"name":"G protein signaling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"GPCR signaling pathway via cyclic nucleotide second messenger","type":"exact"}],"termid":"GO:0007187"}


id: GO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic phenol-containing compound metabolic process","termid":"GO:0018959"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic phenol-containing compound catabolic process","synonyms":[{"name":"aerobic phenol-containing compound breakdown","type":"exact"},{"name":"aerobic phenol-containing compound catabolism","type":"exact"},{"name":"aerobic phenol-containing compound degradation","type":"exact"}],"termid":"GO:0046191"}


id: MONDO:0006609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive shedding of dry scaly material from the scalp in humans.","definition_xrefs":["MESH:D063807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic dermatitis","termid":"MONDO:0006608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"seborrheic infantile dermatitis","secondary_identifiers":["SCTID:400201008","ICD9:690.11","DOID:8941"],"synonyms":[{"name":"Seborrhoea capitis","type":"exact"},{"name":"Seborrhoeic dermatitis of scalp","type":"exact"},{"name":"Seborrhoeic eczema of scalp","type":"exact"},{"name":"complement 5 dysfunction","type":"exact"},{"name":"cradle cap","type":"exact"},{"name":"generalised seborrheic dermatitis of infants","type":"exact"},{"name":"generalized seborrheic dermatitis of infants","type":"exact"},{"name":"infantile seborrheic dermatitis","type":"exact"},{"name":"infantile seborrhoeic dermatitis","type":"exact"},{"name":"pityriasis capitis","type":"related"},{"name":"scalp seborrheic dermatitis (disease)","type":"exact"},{"name":"seborrhea capitis","type":"exact"},{"name":"seborrhea sicca","type":"exact"},{"name":"seborrheic dermatitis (disease) of scalp","type":"exact"}],"termid":"MONDO:0006609","xrefs":{"Monarch":{"xref_id":"0006609"}}}


id: FYPO:0003337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to septum","termid":"FYPO:0002718"},{"relation_name":"is_a","term_name":"increased protein localization to cell division site","termid":"FYPO:0004655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to septum","synonyms":[{"name":"increased protein localisation to septum","type":"exact"},{"name":"increased protein localization to cell septum","type":"exact"},{"name":"increased protein localization to division septum","type":"exact"},{"name":"increased protein localization to septum during mitotic cell cycle","type":"related"},{"name":"increased protein localization to septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003337"}


id: PBO:0061096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 1","termid":"PBO:0061096"}


id: MONDO:0004608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the oropharynx.","definition_xrefs":["NCIT:C7398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx cancer","termid":"MONDO:0005517"},{"relation_name":"is_a","term_name":"neoplasm of oropharynx","termid":"MONDO:0021364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oropharynx cancer","secondary_identifiers":["DOID:8557","EFO:1001931","MEDGEN:57783","MESH:D009959","ICD9:146","ICD9:146.5","ICD9:146.6","ICD9:146.9","UMLS:C0153382","ICD9:146.7","ICD10CM:C10"],"synonyms":[{"name":"cancer of oropharynx","type":"exact"},{"name":"malignant neoplasm of junctional region of oropharynx","type":"exact"},{"name":"malignant neoplasm of lateral wall of oropharynx","type":"exact"},{"name":"malignant neoplasm of oropharynx","type":"exact"},{"name":"malignant neoplasm of posterior wall of oropharynx","type":"exact"},{"name":"malignant neoplasm of the oropharynx","type":"exact"},{"name":"malignant oropharyngeal neoplasm","type":"exact"},{"name":"malignant oropharyngeal tumor","type":"exact"},{"name":"malignant oropharyngeal tumour","type":"exact"},{"name":"malignant oropharynx neoplasm","type":"exact"},{"name":"malignant tumor of mesopharynx","type":"exact"},{"name":"malignant tumor of oropharynx","type":"exact"},{"name":"malignant tumor of posterior wall of oropharynx","type":"exact"},{"name":"malignant tumor of the oropharynx","type":"exact"},{"name":"malignant tumour of mesopharynx","type":"exact"},{"name":"malignant tumour of oropharynx","type":"exact"},{"name":"malignant tumour of posterior wall of oropharynx","type":"exact"},{"name":"malignant tumour of the oropharynx","type":"exact"},{"name":"oropharyngeal cancer","type":"exact"},{"name":"oropharyngeal carcinoma","type":"narrow"},{"name":"oropharynx cancer","type":"exact"},{"name":"primary malignant neoplasm of lateral wall of oropharynx","type":"exact"}],"termid":"MONDO:0004608","xrefs":{"Monarch":{"xref_id":"0004608"}}}


id: MOD:00323
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysine methyl ester.","definition_xrefs":["Unimod:34#C-term","PubMed:10973948","RESID:AA0318","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-lysine","termid":"MOD:01683"},{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-lysine methyl ester","synonyms":[{"name":"2,6-diaminohexanoic methyl ester","type":"exact"},{"name":"L-lysine methyl ester","type":"exact"},{"name":"MOD_RES Lysine methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"OMeLys","type":"exact"},{"name":"alpha,epsilon-diaminocaproic methyl ester","type":"exact"},{"name":"methyl (S)-2,6-diaminohexanoate","type":"exact"},{"name":"methyl L-lysinate","type":"exact"},{"name":"methyl esterified L-lysine","type":"exact"}],"termid":"MOD:00323"}


id: PBO:0113437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Squalene epoxidase; catalyzes epoxidation of squalene to 2,3-oxidosqualene; plays essential role in ergosterol-biosynthesis pathway and is specific target of antifungal drug terbinafine; directed to ER via guided entry of tail-anchored proteins (GET) pathway; degradation by ERAD triggered by membrane lipid saturation; human SQLE functionally complements the lethality of the erg1 null mutation","termid":"PBO:0113437"}


id: PBO:0042244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 6","termid":"PBO:0042244"}


id: GO:0140891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional small regulatory non-coding RNA derived from a tRNA.","definition_xrefs":["PMID:29120263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA-derived regulatory ncRNA processing","synonyms":[{"name":"tRNA-derived small RNA processing","type":"related"}],"termid":"GO:0140891"}


id: PBO:0050399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 4","termid":"PBO:0050399"}


id: GO:0018938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-nitropropane, a clear, colorless liquid with a mild, fruity odor. 2-nitropropane is used principally as a solvent and chemical intermediate. As a solvent, it is used in inks, paints, adhesives, varnishes, polymers, and synthetic materials. It is a feedstock for the manufacture of 2-nitro-2-methyl-1-propanol and 2-amino-2-methyl-1-propanol.","definition_xrefs":["UM-BBD_pathwayID:npp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-nitropropane metabolic process","secondary_identifiers":["MetaCyc:PWY-723"],"synonyms":[{"name":"2-nitropropane metabolism","type":"exact"}],"termid":"GO:0018938"}


id: MONDO:0003513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature or immature teratoma that arises from the stomach.","definition_xrefs":["NCIT:C5259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric teratoma","secondary_identifiers":["MEDGEN:272665","UMLS:C1333790","DOID:5561"],"synonyms":[{"name":"gastric teratoma","type":"exact"},{"name":"stomach teratoma","type":"exact"},{"name":"teratoma of stomach","type":"exact"},{"name":"teratoma of the stomach","type":"exact"}],"termid":"MONDO:0003513","xrefs":{"Monarch":{"xref_id":"0003513"}}}


id: PBO:0072393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 19","termid":"PBO:0072393"}


id: GO:0043470
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314","SJAG_02785","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73410,76379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[96908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[90032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[70422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[76378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of carbohydrates.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of carbohydrate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043470","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045820":null,"GO:1905857":null,"GO:2001172":null}}


id: MONDO:0005132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A herpesvirus infection caused by Cytomegalovirus. Healthy individuals generally do not produce symptoms. However, the infection may be life-threatening in affected immunocompromised patients. The virus may cause retinitis, esophagitis, gastritis, and colitis. Morphologically, it is characterized by the presence of intranuclear inclusion bodies.","definition_xrefs":["NCIT:C53649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytomegalovirus infection","secondary_identifiers":["SCTID:28944009","UMLS:C0010823","EFO:0001062","MEDGEN:8239","ICD9:078.5","MESH:D003586"],"synonyms":[{"name":"CMV infection","type":"exact"},{"name":"Cytomegaloviral infection","type":"exact"},{"name":"HCMV infection","type":"exact"}],"termid":"MONDO:0005132","xrefs":{"Monarch":{"xref_id":"0005132"}}}


id: MONDO:0032656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, cataracts, impaired intellectual development, and dystonia with abnormal striatum","secondary_identifiers":["OMIM:618284","UMLS:C4748984","MEDGEN:1648355"],"synonyms":[{"name":"MCIDDS","type":"related"},{"name":"MICROCEPHALY, CATARACTS, IMPAIRED INTELLECTUAL DEVELOPMENT, AND DYSTONIA WITH ABNORMAL STRIATUM","type":"related"}],"termid":"MONDO:0032656","xrefs":{"Monarch":{"xref_id":"0032656"}}}


id: MONDO:0008149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteogenesis imperfecta found in a single South African family.","definition_xrefs":["PMID:7241530","DOID:0110335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta type 1","termid":"MONDO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and wormian bones but without fractures","secondary_identifiers":["UMLS:C1833748","MEDGEN:331579","MESH:C563487","GARD:15100","OMIM:166230"],"synonyms":[{"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and WORMIAN bones, but without fractures","type":"related"}],"termid":"MONDO:0008149","xrefs":{"Monarch":{"xref_id":"0008149"}}}


id: PBO:0027482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_level_during_G0","termid":"PBO:0027482"}


id: PATO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"width","synonyms":[{"name":"breadth","type":"related"}],"termid":"PATO:0000921"}


id: PBO:0029250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_polymerization","termid":"PBO:0029250"}


id: PBO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large subunit Gsa1","termid":"PBO:0001749"}


id: PBO:0025444
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic aciduria","termid":"PBO:0025444"}


id: GO:0102525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-argininium(1+) + 2-oxoglutarate + O2 = (3S)-3-hydroxy-L-arginine(1+) + succinate + carbon dioxide.","definition_xrefs":["GOC:pz","RHEA:36607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-oxoglutarate, L-arginine oxygenase (succinate-forming) activity","secondary_identifiers":["EC:1.14.11.41","MetaCyc:RXN-14542"],"termid":"GO:0102525"}


id: _global:negatively_regulates_characteristic
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates_characteristic","termid":"_global:regulates_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates_characteristic","secondary_identifiers":["RO:0019002"],"termid":"_global:negatively_regulates_characteristic"}


id: FYPO:0004294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has a septum in an abnormal location when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized septum in stationary phase","synonyms":[{"name":"abnormal septum localization in stationary phase","type":"related"},{"name":"abnormal septum location in stationary phase","type":"exact"},{"name":"abnormal septum position in stationary phase","type":"exact"},{"name":"abnormal septum positioning in stationary phase","type":"related"},{"name":"asymmetric septum in stationary phase","type":"exact"},{"name":"asymmetrically located septum in stationary phase","type":"exact"},{"name":"mislocalised septum in stationary phase","type":"exact"},{"name":"misplaced septum in stationary phase","type":"exact"}],"termid":"FYPO:0004294"}


id: GO:0005267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a potassium ion through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:pr","GOC:BHF","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium channel activity","secondary_identifiers":["Reactome:R-HSA-2534365","Reactome:R-HSA-1299297","Reactome:R-HSA-1299304","Reactome:R-HSA-5578910","Reactome:R-HSA-1299359","Reactome:R-HSA-1296348","Reactome:R-HSA-1299318","Reactome:R-HSA-1299338","Reactome:R-HSA-1296035","Reactome:R-HSA-1296024","Reactome:R-HSA-1296037","Reactome:R-HSA-1296039"],"termid":"GO:0005267"}


id: FYPO:0000414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which plasma membrane fusion involved in cytogamy is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased cell fusion during mating (obsolete FYPO:0000414)","synonyms":[{"name":"cell fusion: decreased","type":"related"},{"name":"decreased cell fusion during conjugation","type":"exact"},{"name":"decreased plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"reduced cell fusion during mating","type":"exact"}],"termid":"FYPO:0000414"}


id: PBO:0058003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3926-2","termid":"PBO:0058003"}


id: MONDO:0012750
data:
  {"annotated_genes":["SJAG_03847"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86331],"is_not":false,"summary":null,"term":"MONDO:0012750"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03847":null},"genotype_count":0,"is_obsolete":false,"name":"lethal arthrogryposis-anterior horn cell disease syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:53696","GARD:16658","MEDGEN:1677784","MESH:C567502","SCTID:715565004","OMIM:611890","UMLS:C5193016"],"synonyms":[{"name":"LAAHD","type":"exact"},{"name":"Vuopala disease","type":"exact"},{"name":"congenital arthrogryposis with anterior horn cell disease","type":"exact"},{"name":"lethal arthrogryposis with anterior horn cell disease","type":"related"}],"termid":"MONDO:0012750","terms_by_termid":{"MONDO:0012750":null},"xrefs":{"Monarch":{"xref_id":"0012750"}}}


id: GO:1990012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic inclusion body found in some lateral geniculate neurons and composed of sheets of tubules (25 nm in diameter) separated by dense material (about 75 nm wide), which together with the tubules whorl give a structure resembling a fingerprint.","definition_xrefs":["NIF_Subcellular:nlx_151681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminated body","termid":"GO:1990011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"complex laminated body","synonyms":[{"name":"CLB","type":"related"}],"termid":"GO:1990012"}


id: FYPO:0002843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"output_of","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleoplasm","synonyms":[{"name":"ectopic protein localization to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002843"}


id: PBO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr2 (predicted)","termid":"PBO:0005591"}


id: FYPO:0003840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to carbendazim (mecarzole; MBC). Cells stop growing (and may die) at a concentration of carbendazim that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to carbendazim","synonyms":[{"name":"hypersensitive to carbendazim","type":"exact"},{"name":"sensitive to MBC","type":"exact"},{"name":"sensitive to carbendazim during mitotic cell cycle","type":"related"},{"name":"sensitive to carbendazim during vegetative growth","type":"exact"},{"name":"sensitive to mecarzole","type":"exact"},{"name":"sensitive to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"sensitive to methylbenzylcarbamylate","type":"exact"}],"termid":"FYPO:0003840"}


id: PBO:0028326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028326"}


id: GO:0046319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucosylceramide biosynthetic process","termid":"GO:0046317"},{"relation_name":"is_a","term_name":"positive regulation of ceramide biosynthetic process","termid":"GO:2000304"},{"relation_name":"positively_regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"activation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"positive regulation of glucosylceramide anabolism","type":"exact"},{"name":"positive regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"positive regulation of glucosylceramide formation","type":"exact"},{"name":"positive regulation of glucosylceramide synthesis","type":"exact"},{"name":"stimulation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"up regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"up-regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"upregulation of glucosylceramide biosynthetic process","type":"exact"}],"termid":"GO:0046319"}


id: PBO:0064465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 2, accessory subunit pseudogene 1","termid":"PBO:0064465"}


id: MONDO:0012107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, adult-onset, with anosmia","secondary_identifiers":["MESH:C563870","UMLS:C1837492","MEDGEN:324809","OMIM:608720"],"synonyms":[{"name":"neuropathy, hereditary sensory and autonomic, adult-onset, with anosmia","type":"exact"}],"termid":"MONDO:0012107","xrefs":{"Monarch":{"xref_id":"0012107"}}}


id: PBO:0062433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 96 pseudogene","termid":"PBO:0062433"}


id: FYPO:0005009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a lower extent than normal.","definition_xrefs":["PMID:22976295","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005009)","synonyms":[{"name":"decreased protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"decreased protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"reduced protein serine phosphorylation at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005009"}


id: PBO:0086602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is induced by activation of the HOG1 mitogen-activated signaling pathway and this induction is Hog1p/Pbs2p dependent; YJL107C and adjacent ORF, YJL108C are merged in related fungi","termid":"PBO:0086602"}


id: PR:O74758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D11.03c gene.","definition_xrefs":["UniProtKB:O74758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.03c","synonyms":[{"name":"Spom972h-SPBC17D11.03c","type":"exact"}],"termid":"PR:O74758"}


id: PBO:0040339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 5","termid":"PBO:0040339"}


id: MONDO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary immaturity","secondary_identifiers":["MEDGEN:542574","DOID:424","UMLS:C0270163","SCTID:42908004","ICD9:770.4"],"synonyms":[{"name":"primary atelectasis of newborn","type":"exact"},{"name":"primary atelectasis, in perinatal period","type":"exact"}],"termid":"MONDO:0002929","xrefs":{"Monarch":{"xref_id":"0002929"}}}


id: PBO:0066175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor like 1","termid":"PBO:0066175"}


id: PBO:0057355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-3","termid":"PBO:0057355"}


id: PR:Q10425
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01787","PANTHER:PTHR14068:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.08","secondary_identifiers":["UniProtKB:Q10425"],"synonyms":[{"name":"Spom972h-EIF3B","type":"exact"},{"name":"eIF3 p90 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3b (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 90 kDa subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spPrt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3 p90 subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10425"}


id: MONDO:1012978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in dogs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, dog","termid":"MONDO:1012978","xrefs":{"Monarch":{"xref_id":"1012978"}}}


id: GO:1901370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glutathione stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glutathione","termid":"GO:1901370"}


id: PBO:0068404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 223","termid":"PBO:0068404"}


id: PBO:0067732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 30","termid":"PBO:0067732"}


id: PBO:0113345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 25S rRNA maturation and 60S ribosomal subunit assembly; localizes to the nucleolus and in foci along nuclear periphery; constituent of 66S pre-ribosomal particles; cooperates with Rrs1p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering","termid":"PBO:0113345"}


id: PBO:0072860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl-tRNA synthetase 1","termid":"PBO:0072860"}


id: MONDO:0019983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"multiloculated renal cyst","secondary_identifiers":["MEDGEN:609113","SCTID:86463003","UMLS:C0431719","NANDO:2200171","Orphanet:97366","GARD:19376"],"synonyms":[{"name":"multilocular cyst of the kidney","type":"exact"},{"name":"multilocular renal cyst","type":"exact"}],"termid":"MONDO:0019983","xrefs":{"Monarch":{"xref_id":"0019983"}}}


id: PBO:0058195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4488","termid":"PBO:0058195"}


id: GO:0141068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of epigenetic modifications (imprints) in autosomal (non-sexual) chromosomes during gametogenesis, and propagation of these imprints during the organism's life. Genomic imprinting leads to an asymmetry between the maternal and paternal alleles and differential expression of the corresponding alleles. This can happen through heterochromatin formation or differential chromatin loop formation.","definition_xrefs":["PMID:31782494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"autosome genomic imprinting","synonyms":[{"name":"autosomal genomic imprinting","type":"exact"},{"name":"genomic imprinting of autosomal genes","type":"exact"}],"termid":"GO:0141068"}


id: PBO:0079319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 9B","termid":"PBO:0079319"}


id: MOD:00035
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to (2S,3R)-3-hydroxyasparagine.","definition_xrefs":["ChEBI:141853","RESID:AA0026","PubMed:2820791","PubMed:11823643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxy-L-asparagine","termid":"MOD:01688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R)-3-hydroxyasparagine","synonyms":[{"name":"(2S,3R)-2,4-diamino-3-hydroxy-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-hydroxy-4-butanediamic acid","type":"exact"},{"name":"(2S,3R)-3-hydroxyasparagine","type":"exact"},{"name":"(3R)3HyAsn","type":"exact"},{"name":"2-azanyl-3-hydroxy-4-butanediamic acid","type":"exact"},{"name":"L-erythro-beta-hydroxyasparagine","type":"exact"},{"name":"MOD_RES (3R)-3-hydroxyasparagine","type":"exact"},{"name":"erythro-beta-hydroxylated L-asparagine","type":"exact"}],"termid":"MOD:00035"}


id: PBO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_break-induced_loss_of_heterozygosity_via_chromosomal_translocation","termid":"PBO:0034673"}


id: PBO:0073491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate lyase 1","termid":"PBO:0073491"}


id: PBO:0073329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 5","termid":"PBO:0073329"}


id: PBO:0028656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-S-shaped_cell","termid":"PBO:0028656"}


id: MONDO:0004678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common fungal infection of the stratum corneum of the skin, hair, or nails by a dermatophyte. It is characterized by itching, inflammation, redness of the skin, small papular vesicles, central clearing, fissures, scaling, and/or hair loss in the affected area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"},{"relation_name":"is_a","term_name":"superficial mycosis","termid":"MONDO:0024268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatophytosis","secondary_identifiers":["ICD9:110.9","ICD10CM:B35","MEDGEN:3768","NCIT:C26745","SCTID:47382004","UMLS:C0011636","ICD9:110","DOID:8913","icd11.foundation:1802307036","ICD9:110.8"],"synonyms":[{"name":"dermatomycosis","type":"related"},{"name":"fungal skin disease","type":"exact"},{"name":"fungal skin diseases","type":"exact"},{"name":"ringworm","type":"related"},{"name":"skin disease, fungal","type":"exact"},{"name":"skin diseases, fungal","type":"exact"}],"termid":"MONDO:0004678","xrefs":{"Monarch":{"xref_id":"0004678"}}}


id: PBO:0038652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 2, lysosomal","termid":"PBO:0038652"}


id: PBO:0005112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Ssl1","termid":"PBO:0005112"}


id: PBO:0005361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin For3","termid":"PBO:0005361"}


id: GO:1901335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone catabolic process","synonyms":[{"name":"lactone breakdown","type":"exact"},{"name":"lactone catabolism","type":"exact"},{"name":"lactone degradation","type":"exact"}],"termid":"GO:1901335"}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119701,119702,119705,119709,119714,119717],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PMID:22156749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_01906","SJAG_03940"],"single_locus_genotype_uniquenames":["ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","nem1delta","ned1delta"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: PR:Q9P381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13A2.03 gene.","definition_xrefs":["UniProtKB:Q9P381","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.03","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-DG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTP:phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC13A2.03","type":"exact"}],"termid":"PR:Q9P381"}


id: PR:O59706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3A subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02615","PANTHER:PTHR12786:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.09","secondary_identifiers":["UniProtKB:O59706"],"synonyms":[{"name":"Spom972h-SF3A3","type":"exact"},{"name":"spliceosome-associated protein 61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59706"}


id: PBO:0077174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talin 1","termid":"PBO:0077174"}


id: MONDO:0015542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophagocytic lymphohistiocytosis due to infections, autoimmune disorders, or underlying malignancies. Signs and symptoms include fever, lymphadenopathy, hepatomegaly, splenomegaly, and pancytopenia.","definition_xrefs":["NCIT:C121184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophagocytic syndrome","termid":"MONDO:0015540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"secondary hemophagocytic lymphohistiocytosis","secondary_identifiers":["Orphanet:158041","GARD:20026","UMLS:C4054044","MEDGEN:883550"],"synonyms":[{"name":"acquired hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"acquired hemophagocytic syndrome","type":"exact"},{"name":"reactive hemophagocytic syndrome","type":"exact"}],"termid":"MONDO:0015542","xrefs":{"Monarch":{"xref_id":"0015542"}}}


id: PBO:0016538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, associated with clathrin coated vesicles (predicted)","termid":"PBO:0016538"}


id: MONDO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuritis of a single nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"mononeuritis simplex","secondary_identifiers":["UMLS:C0235880","MEDGEN:65914","DOID:1802","ICD9:355.9","SCTID:32595002"],"synonyms":[{"name":"mononeuritis","type":"exact"}],"termid":"MONDO:0002121","xrefs":{"Monarch":{"xref_id":"0002121"}}}


id: GO:0019446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tyrosine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine catabolic process to phosphoenolpyruvate (obsolete GO:0019446)","synonyms":[{"name":"tyrosine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"tyrosine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019446"}


id: GO:0046310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of 1,3-dichloro-2-propanol (DCP), a halohydrin suspected of being carcinogenic, mutagenic and genotoxic.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3-dichloro-2-propanol catabolic process (obsolete GO:0046310)","synonyms":[{"name":"1,3-dichloro-2-propanol breakdown","type":"exact"},{"name":"1,3-dichloro-2-propanol catabolism","type":"exact"},{"name":"1,3-dichloro-2-propanol degradation","type":"exact"}],"termid":"GO:0046310"}


id: PBO:0030431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_eisosome_filament","termid":"PBO:0030431"}


id: PBO:0070651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 22","termid":"PBO:0070651"}


id: PBO:0043639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 2","termid":"PBO:0043639"}


id: MONDO:0013399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiomyopathy, dilated, 1T (obsolete MONDO:0013399)","termid":"MONDO:0013399","xrefs":{"Monarch":{"xref_id":"0013399"}}}


id: PBO:0045570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 19","termid":"PBO:0045570"}


id: MONDO:0013908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thyrotoxic periodic paralysis","termid":"MONDO:0019201"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic periodic paralysis, susceptibility to, 3","secondary_identifiers":["UMLS:C3553839","MEDGEN:766753","OMIM:614834"],"synonyms":[{"name":"TTPP3","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0013908","xrefs":{"Monarch":{"xref_id":"0013908"}}}


id: MOD:00862
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-alanine.","definition_xrefs":["ChEBI:29949","PubMed:7287302","PubMed:7961627","RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"},{"name":"MOD_RES D-alanine (Ser)","type":"exact"}],"termid":"MOD:00862"}


id: GO:0009451
data:
  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id: FYPO:0006126
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id: PBO:0109087
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id: PBO:0110497
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id: MONDO:0032568
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id: PBO:0036064
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id: GO:0009953
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id: GO:0038043
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id: MONDO:1012805
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id: PBO:0085576
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id: PBO:0028891
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id: PBO:0056284
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id: MONDO:0022464
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id: PR:O59753
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein complementing XP-A cells that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02497","PANTHER:PTHR10142:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.03","secondary_identifiers":["UniProtKB:O59753"],"synonyms":[{"name":"Spom972h-XPA","type":"exact"},{"name":"XP-A family homolog rhp14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59753"}


id: PBO:0058136
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id: PBO:0076695
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id: GO:1903745
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id: PBO:0036433
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id: GO:1905474
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id: PBO:0059502
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id: MONDO:0007677
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id: PBO:0031821
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id: PBO:0031028
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id: PBO:0042879
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 206","termid":"PBO:0042879"}


id: PBO:0043568
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 5 chain","termid":"PBO:0043568"}


id: MONDO:1010471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"},{"relation_name":"is_a","term_name":"conotruncal heart malformations, dog","termid":"MONDO:1010453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, dog","secondary_identifiers":["OMIA:000795-9615"],"termid":"MONDO:1010471","xrefs":{"Monarch":{"xref_id":"1010471"}}}


id: GO:1904086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epiboly involved in gastrulation with mouth forming second.","definition_xrefs":["PMID:24892953","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epiboly involved in gastrulation with mouth forming second","termid":"GO:1904086"}


id: GO:0051203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The reduction of peptidyl-aspartic acid to form peptidyl-L-aspartyl aldehyde, as found photosystem II P680 chlorophyll A apoprotein.","definition_xrefs":["PMID:15237995","RESID:AA0373"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid reduction to form L-aspartyl aldehyde (obsolete GO:0051203)","synonyms":[{"name":"peptidyl-aspartic acid reduction to form L-aspartate-beta-semialdehyde","type":"exact"},{"name":"peptidyl-aspartic acid reduction to form L-beta-formylalanine","type":"exact"}],"termid":"GO:0051203"}


id: GO:1904686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["GO_REF:0000058","PMID:25963819","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"regulation of mitotic spindle disassembly","synonyms":[{"name":"regulation of mitotic spindle breakdown","type":"exact"},{"name":"regulation of mitotic spindle catabolism","type":"exact"},{"name":"regulation of mitotic spindle degradation","type":"exact"},{"name":"regulation of spindle breakdown during mitosis","type":"exact"},{"name":"regulation of spindle degradation during mitosis","type":"exact"},{"name":"regulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904686"}


id: PBO:0064361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate transmembrane protein, androgen induced 1","termid":"PBO:0064361"}


id: FYPO:0005543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"increased duration of actomyosin contractile ring contraction","synonyms":[{"name":"increased duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"prolonged actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0005543"}


id: PBO:0089561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (Sam37)","termid":"PBO:0089561"}


id: GO:1904749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:TermGenie","GOC:BHF_telomere","GO_REF:0000058","GOC:BHF","GOC:nc","PMID:24415760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to nucleolus","synonyms":[{"name":"regulation of protein localisation in nucleolus","type":"exact"},{"name":"regulation of protein localisation to nucleolus","type":"exact"},{"name":"regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904749"}


id: PBO:0047429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 rRNA-processing protein","termid":"PBO:0047429"}


id: PBO:0028935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tryptone","termid":"PBO:0028935"}


id: PBO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific protein kinase Mug27/Slk1","termid":"PBO:0005592"}


id: PR:Q9Y7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoheme IX farnesyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03301","PANTHER:PTHR11048:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.02c","secondary_identifiers":["UniProtKB:Q9Y7Y4"],"synonyms":[{"name":"Spom972h-COX10","type":"exact"},{"name":"heme O synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y4"}


id: PBO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 51","termid":"PBO:0071445"}


id: FYPO:0007365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphoenolpyruvate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphoenolpyruvate level","synonyms":[{"name":"decreased cellular PEP level","type":"exact"},{"name":"decreased cellular phosphoenolpyruvate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphoenolpyruvate level during vegetative growth","type":"exact"},{"name":"decreased level of phosphoenolpyruvate in cell","type":"exact"},{"name":"reduced cellular phosphoenolpyruvate level","type":"exact"}],"termid":"FYPO:0007365"}


id: GO:0019171
data:
  {"annotated_genes":["SJAG_04107","SJAG_00305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59928,75007],"is_not":false,"summary":null,"term":"GO:0019171"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3R)-hydroxyacyl-[acyl-carrier-protein] = a (2E)-enoyl-[acyl-carrier-protein] + H2O.","definition_xrefs":["RHEA:13097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:4.2.1.59","MetaCyc:3-HYDROXYDECANOYL-ACP-DEHYDR-RXN"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","type":"related"},{"name":"3-hydroxyacyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyacyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0019171","terms_by_termid":{"GO:0019171":null}}


id: GO:0102398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + dTDP-3-amino-4-dehydro-2,3,6-trideoxy-alpha-D-glucose = S-adenosyl-L-homocysteine + dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTDP-3-amino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N-methyltransferase activity (obsolete GO:0102398)","termid":"GO:0102398"}


id: PBO:0073091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C","termid":"PBO:0073091"}


id: GO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the C-terminal propeptide at Ala-Asp in type I and II procollagens and at Arg-Asp in type III.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete procollagen C-endopeptidase activity (obsolete GO:0017026)","synonyms":[{"name":"BMP1","type":"narrow"},{"name":"carboxyprocollagen peptidase activity","type":"related"},{"name":"procollagen C-endopeptidase activity","type":"exact"},{"name":"procollagen C-proteinase activity","type":"related"},{"name":"procollagen C-terminal peptidase activity","type":"related"},{"name":"procollagen C-terminal proteinase activity","type":"related"},{"name":"procollagen carboxy-terminal proteinase activity","type":"related"},{"name":"procollagen carboxypeptidase activity","type":"related"},{"name":"procollagen peptidase activity","type":"related"}],"termid":"GO:0017026"}


id: PBO:0038929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L3","termid":"PBO:0038929"}


id: FYECO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Uracil was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000070 absence of uracil (obsolete FYECO:0000070)","termid":"FYECO:0000070"}


id: PBO:0017575
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hmg protein counteracting Adriamycin in Pombe","termid":"PBO:0017575"}


id: PBO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin","termid":"PBO:0043368"}


id: PBO:0052779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19 pseudogene 2","termid":"PBO:0052779"}


id: GO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopentanone + H+ + NADPH + O2 = 5-valerolactone + H2O + NADP+.","definition_xrefs":["RHEA:15737","EC:1.14.13.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cyclopentanone monooxygenase activity","secondary_identifiers":["MetaCyc:CYCLOPENTANONE-MONOOXYGENASE-RXN","KEGG_REACTION:R02554"],"synonyms":[{"name":"cyclopentanone 1,2-monooxygenase activity","type":"related"},{"name":"cyclopentanone oxygenase activity","type":"related"},{"name":"cyclopentanone,NADPH:oxygen oxidoreductase (5-hydroxylating, lactonizing)","type":"related"}],"termid":"GO:0047799"}


id: PBO:0016960
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin DeAcetylase","termid":"PBO:0016960"}


id: GO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex of two polypeptides which catalyzes the transfer of methyl group from methylthiol to coenzyme M during methanogenesis.","definition_xrefs":["PMID:9371433","GOC:mengo_curators","PMID:11073950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methylthiol:coenzyme M methyltransferase complex","synonyms":[{"name":"methylthiol coenzyme M methyl transferase complex","type":"exact"},{"name":"methylthiol:CoM methyltransferase complex","type":"exact"},{"name":"methylthiol:coenzyme M methyl transferase complex","type":"exact"}],"termid":"GO:0044680"}


id: GO:0003800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein involved in an antiviral response.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete antiviral response protein activity (obsolete GO:0003800)","synonyms":[{"name":"antiviral response protein activity","type":"exact"}],"termid":"GO:0003800"}


id: GO:0048919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast development","termid":"GO:0048884"},{"relation_name":"part_of","term_name":"posterior lateral line development","termid":"GO:0048916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast development","termid":"GO:0048919"}


id: _global:genome_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome_of","termid":"_global:genome_of"}


id: PBO:0049705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0049705"}


id: PBO:0045083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like non-canonical Notch ligand 2","termid":"PBO:0045083"}


id: PR:O94679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03605","PANTHER:PTHR14222:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.13","secondary_identifiers":["UniProtKB:O94679"],"synonyms":[{"name":"Spom972h-NCAPD2","type":"exact"},{"name":"XCAP-D2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p128 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O94679"}


id: PBO:0090857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proline transmembrane transporter Put4","termid":"PBO:0090857"}


id: GO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of lateral motor column neurons. Lateral motor column neurons are generated only on limb levels and send axons into the limb mesenchyme. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","PMID:11262869","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron differentiation","termid":"GO:0021525"}


id: GO:0051306
data:
  {"annotated_genes":["SJAG_03350","SJAG_02542","SJAG_03048","SJAG_00883","SJAG_01956","SJAG_00146","SJAG_02169","SJAG_04699","SJAG_04573","SJAG_01082","SJAG_03681","SJAG_03351","SJAG_02186","SJAG_01679","SJAG_03353","SJAG_01297","SJAG_00666","SJAG_04999","SJAG_02380","SJAG_05329","SJAG_02336","SJAG_04884","SJAG_04661","SJAG_01330","SJAG_00460","SJAG_04259","SJAG_03126","SJAG_04126","SJAG_01805","SJAG_02498","SJAG_04968","SJAG_05236","SJAG_02451","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90685,92093,95501,101120,102157,117880],"is_not":false,"summary":null,"term":"GO:0051306"},{"annotations":[99914,108568,114087,116202,112269,91061,104211,107548,114574],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[99758,102117,110216,115858,106639,114803],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[103596],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000816"},{"annotations":[94536],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116975],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[115072,94144,111683,100463,98025,102427,102698],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[116977],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905824"},{"annotations":[96933,99934,99929],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901970"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04661":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2467813"],"synonyms":[{"name":"chromosome separation during mitosis","type":"related"},{"name":"mitotic chromosome separation","type":"related"},{"name":"mitotic sister chromatid resolution","type":"exact"},{"name":"sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:0051306","terms_by_termid":{"GO:0007094":null,"GO:0045842":null,"GO:0051306":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null,"GO:2000816":null}}


id: FYPO:0002396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"normal maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002396"}


id: PBO:0088826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1","termid":"PBO:0088826"}


id: GO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"complement component C5a binding","termid":"GO:0001856"}


id: MONDO:0013541
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86308],"is_not":false,"summary":null,"term":"MONDO:0013541"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:13032","Orphanet:300570","DOID:0090137","MEDGEN:814727","OMIM:614039","UMLS:C3808397"],"synonyms":[{"name":"CDCBM1","type":"exact"},{"name":"TUBB3 complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBB3","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 1","type":"exact"},{"name":"cortical dysgenesis with pontocerebellar hypoplasia due to TUBB3 mutation","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 1","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 1","type":"related"}],"termid":"MONDO:0013541","terms_by_termid":{"MONDO:0013541":null},"xrefs":{"Monarch":{"xref_id":"0013541"}}}


id: PBO:0064449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocalyxin like","termid":"PBO:0064449"}


id: MONDO:1010279
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hymen, imperforate that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hymen, imperforate, non-human animal","secondary_identifiers":["OMIA:001107"],"termid":"MONDO:1010279","xrefs":{"Monarch":{"xref_id":"1010279"}}}


id: MONDO:0800130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory syndrome characterized by onset of various autoimmune features usually in the first decades of life, although later onset has been reported. Typical features include autoimmune cytopenia, hemolytic anemia, thrombocytopenia, and lymphadenopathy. More variable features may include autoimmune thyroiditis, psoriasis or eczema, nephritis, hepatitis, and symptoms of systemic lupus erythematosus (SL). Some patients may have recurrent infections or exacerbation of the disease with acute infection. Laboratory studies show variable findings, often decreased numbers of naive B cells, lymphopenia with skewed subsets, hypogammaglobulinemia, presence of autoantibodies, and a hyperinflammatory state. The disorder shows autosomal dominant inheritance with incomplete penetrance.","definition_xrefs":["OMIM:619375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome with immunodeficiency","secondary_identifiers":["MEDGEN:1784363","UMLS:C5543547"],"termid":"MONDO:0800130","xrefs":{"Monarch":{"xref_id":"0800130"}}}


id: PBO:0089333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Teb1","termid":"PBO:0089333"}


id: MONDO:0017800
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudo-Meigs syndrome","secondary_identifiers":["Orphanet:314459","GARD:21373","UMLS:C5190824","MEDGEN:1678402"],"synonyms":[{"name":"pseudo-Demons-Meigs syndrome","type":"exact"}],"termid":"MONDO:0017800","xrefs":{"Monarch":{"xref_id":"0017800"}}}


id: PBO:0069344
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 604, pseudogene","termid":"PBO:0069344"}


id: PR:Q9UUH8
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUH8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.04c","synonyms":[{"name":"Spom972h-SPAC630.04c","type":"exact"}],"termid":"PR:Q9UUH8"}


id: PBO:0109514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCP nuclear cofactor family member 1","termid":"PBO:0109514"}


id: PR:000059631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein spc7 (Schizosaccharomyces pombe) that has been phosphorylated on residues at positions equivalent to Thr-257, Thr-338, Thr-366, Thr-395, Thr-422, Thr-453, Thr-507, Thr-529, and Thr-552 of the amino acid sequence represented by UniProtKB:O59757. Example: UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047.","definition_xrefs":["PomBase:VW","PMID:22521786","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spc7/Phos-MELT","pombase_gene_id":"SPCC1020.02","synonyms":[{"name":"PomBase_original_PRO_term_name: kinetochore protein spc7 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spc7/Phos-MELT","type":"exact"},{"name":"Spom-spc7/Phos:1","type":"exact"},{"name":"UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047","type":"narrow"}],"termid":"PR:000059631"}


id: PBO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 17","termid":"PBO:0071176"}


id: PATO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000129 absolute weight (obsolete PATO:0000129)","termid":"PATO:0000129"}


id: MONDO:0019046
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  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Each type of leukodystrophy is caused by a specific gene abnormality that leads to abnormal development or destruction of the white matter (myelin sheath) of the brain. The myelin sheath is the protective covering of the nerve and nerves can't function normally without it. 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id: PBO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 17","termid":"PBO:0060070"}


id: PBO:0063455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE11A antisense RNA 1","termid":"PBO:0063455"}


id: PATO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a spindle-like shape that is wide in the middle and tapers at both ends.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle-shaped","termid":"PATO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusiform","termid":"PATO:0002400"}


id: MONDO:0008829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chylous ascites is a rare form of ascites caused by accumulation of lymph in the peritoneal cavity, usually due to intra-abdominal malignancy, liver cirrhosis or abdominal surgery complications, and present with painless but progressive abdominal distension, dyspnea and weight gain.","definition_xrefs":["Orphanet:1160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chylous ascites","secondary_identifiers":["SCTID:52985009","ICD9:457.8","MedDRA:10003446","NCIT:C34482","OMIM:208300","GARD:1359","icd11.foundation:768846885","UMLS:C0008732","MESH:D002915","MEDGEN:969"],"synonyms":[{"name":"ascites, chylous","type":"related"},{"name":"congenital chylous ascites","type":"related"}],"termid":"MONDO:0008829","xrefs":{"Monarch":{"xref_id":"0008829"}}}


id: PBO:0042937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroadherin","termid":"PBO:0042937"}


id: GO:0100012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that regulates heart induction.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by canonical Wnt signaling pathway (obsolete GO:0100012)","termid":"GO:0100012"}


id: GO:0032307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of icosanoid secretion","termid":"GO:0032304"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin secretion","synonyms":[{"name":"down regulation of prostaglandin secretion","type":"exact"},{"name":"down-regulation of prostaglandin secretion","type":"exact"},{"name":"downregulation of prostaglandin secretion","type":"exact"},{"name":"inhibition of prostaglandin secretion","type":"narrow"},{"name":"negative regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032307"}


id: FYPO:0002045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show decreased sensitivity to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to heat shock","synonyms":[{"name":"increased cell population growth during cellular response to heat shock","type":"exact"},{"name":"increased growth during cellular response to heat shock","type":"exact"},{"name":"resistant to heat shock","type":"exact"}],"termid":"FYPO:0002045"}


id: GO:1990366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic acid.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete response to organic acid (obsolete GO:1990366)","synonyms":[{"name":"response to organic acid","type":"exact"}],"termid":"GO:1990366"}


id: PBO:0087033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L16A; N-terminally acetylated, binds 5.8 S rRNA; transcriptionally regulated by Rap1p; homologous to mammalian ribosomal protein L13A and bacterial L13; RPL16A has a paralog, RPL16B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087033"}


id: FYPO:0003447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glycosylated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of glycosylated protein in cell","synonyms":[{"name":"decreased accumulation of glycosylated protein in cell","type":"related"},{"name":"decreased cellular glycoprotein level","type":"exact"},{"name":"decreased glycosylated protein level during vegetative growth","type":"exact"},{"name":"decreased level of glycosylated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of glycosylated protein in cell during vegetative growth","type":"exact"},{"name":"reduced level of glycosylated protein in cell","type":"exact"}],"termid":"FYPO:0003447"}


id: GO:1900408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:TermGenie","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to oxidative stress","synonyms":[{"name":"down regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down regulation of cellular response to oxidative stress","type":"exact"},{"name":"down-regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down-regulation of cellular response to oxidative stress","type":"exact"},{"name":"downregulation of adaptive response to oxidative stress","type":"narrow"},{"name":"downregulation of cellular response to oxidative stress","type":"exact"},{"name":"inhibition of adaptive response to oxidative stress","type":"narrow"},{"name":"inhibition of cellular response to oxidative stress","type":"narrow"},{"name":"negative regulation of adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:1900408"}


id: GO:0045014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of glucose leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["PMID:11018147","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"},{"relation_name":"is_a","term_name":"negative regulation of transcription by glucose","termid":"GO:0061986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by glucose","synonyms":[{"name":"down regulation of transcription by glucose","type":"exact"},{"name":"down-regulation of transcription by glucose","type":"exact"},{"name":"downregulation of transcription by glucose","type":"exact"},{"name":"glucose effect","type":"exact"},{"name":"glucose repression","type":"exact"},{"name":"inhibition of transcription by glucose","type":"narrow"}],"termid":"GO:0045014"}


id: PBO:0047013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A16","termid":"PBO:0047013"}


id: PBO:0004500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1","termid":"PBO:0004500"}


id: GO:2000124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocannabinoid signaling pathway.","definition_xrefs":["PMID:15550444","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"endocannabinoid signaling pathway","termid":"GO:0071926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of endocannabinoid signaling pathway","synonyms":[{"name":"regulation of endocannabinoid signalling pathway","type":"exact"}],"termid":"GO:2000124"}


id: FYPO:0005200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to UV (obsolete FYPO:0005200)","synonyms":[{"name":"elongated inviable cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell during cellular response to ultraviolet light","type":"exact"},{"name":"lethal; elongated vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005200"}


id: GO:1904912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["PMID:26586433","GOC:BHF","GOC:BHF_telomere","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"positively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of RNA localization to telomere","synonyms":[{"name":"activation of establishment of RNA localisation to telomere","type":"narrow"},{"name":"activation of establishment of RNA localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localization to telomere","type":"exact"}],"termid":"GO:1904912"}


id: MONDO:0043264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent seizures causally related to CRANIOCEREBRAL TRAUMA. Seizure onset may be immediate but is typically delayed for several days after the injury and may not occur for up to two years. The majority of seizures have a focal onset that correlates clinically with the site of brain injury. Cerebral cortex injuries caused by a penetrating foreign object (CRANIOCEREBRAL TRAUMA, PENETRATING) are more likely than closed head injuries (HEAD INJURIES, CLOSED) to be associated with epilepsy. Concussive convulsions are nonepileptic phenomena that occur immediately after head injury and are characterized by tonic and clonic movements. (From Rev Neurol 1998 Feb;26(150):256-261; Sports Med 1998 Feb;25(2):131-6)","definition_xrefs":["MESH:D004834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"post-traumatic epilepsy","secondary_identifiers":["MEDGEN:4991","SCTID:75023009","UMLS:C0014557"],"synonyms":[{"name":"Epilepsies, post-traumatic","type":"related"},{"name":"Epilepsies, traumatic","type":"related"},{"name":"PTE - post-traumatic epilepsy","type":"related"},{"name":"concussive convulsion","type":"related"},{"name":"concussive convulsions","type":"related"},{"name":"convulsion, concussive","type":"related"},{"name":"convulsions, concussive","type":"related"},{"name":"disorder, post-traumatic seizure","type":"related"},{"name":"disorders, post-traumatic seizure","type":"related"},{"name":"early post traumatic seizures","type":"related"},{"name":"early post-traumatic seizure","type":"related"},{"name":"early post-traumatic seizures","type":"related"},{"name":"epilepsy, post traumatic","type":"related"},{"name":"epilepsy, traumatic","type":"related"},{"name":"impact seizure","type":"related"},{"name":"impact seizures","type":"related"},{"name":"late post traumatic seizures","type":"related"},{"name":"late post-traumatic seizure","type":"related"},{"name":"late post-traumatic seizures","type":"related"},{"name":"post traumatic seizure disorder","type":"related"},{"name":"post-traumatic Epilepsies","type":"related"},{"name":"post-traumatic epilepsy","type":"exact"},{"name":"post-traumatic seizure disorder","type":"related"},{"name":"post-traumatic seizure disorders","type":"related"},{"name":"post-traumatic seizure, early","type":"related"},{"name":"post-traumatic seizure, late","type":"related"},{"name":"post-traumatic seizures, early","type":"related"},{"name":"post-traumatic seizures, late","type":"related"},{"name":"seizure disorder, post traumatic","type":"related"},{"name":"seizure disorder, post-traumatic","type":"related"},{"name":"seizure disorders, post-traumatic","type":"related"},{"name":"seizure, early post-traumatic","type":"related"},{"name":"seizure, late post-traumatic","type":"related"},{"name":"seizures, early post-traumatic","type":"related"},{"name":"seizures, late post-traumatic","type":"related"},{"name":"traumatic Epilepsies","type":"related"},{"name":"traumatic epilepsy","type":"related"}],"termid":"MONDO:0043264","xrefs":{"Monarch":{"xref_id":"0043264"}}}


id: GO:0002134
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91198,92016],"is_not":false,"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to UTP, uridine 5'-triphosphate.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002134","terms_by_termid":{"GO:0002134":null}}


id: GO:0031321
data:
  {"annotated_genes":["SJAG_04615","SJAG_03536","SJAG_04781","SJAG_03746","SJAG_04483","SJAG_04922","SJAG_03688","SJAG_04901","SJAG_02241","SJAG_04275","SJAG_04080","SJAG_00971","SJAG_00663","SJAG_00826","SJAG_03915","SJAG_02320","SJAG_00114","SJAG_02248","SJAG_00821","SJAG_00405","SJAG_00486","SJAG_04271","SJAG_02529","SJAG_01769","SJAG_03250","SJAG_04010","SJAG_01483","SJAG_05309","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73433,91839,105298],"is_not":false,"summary":null,"term":"GO:0031321"},{"annotations":[114236,118835,110425,99154,100227,119317,107699,119135,102029,91629,97880,105612,97917,95705],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[103235,97881,114237,108032,100160,100159,97201,104446,92630,107151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[100161,94840,100442,100162,116273,106336],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"During ascospore formation, the process in which each haploid nucleus becomes encapsulated by a double membrane.","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_03250":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030437","GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ascospore-type prospore assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore formation","type":"exact"},{"name":"forespore formation","type":"related"}],"termid":"GO:0031321","terms_by_termid":{"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null}}


id: MONDO:0016838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16q24.3 microdeletion syndrome is a recently described syndrome associated with variable developmental delay, facial dysmorphism, seizures and autistic spectrum disorder.","definition_xrefs":["Orphanet:261250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 16","termid":"MONDO:0016914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16q24.3 microdeletion syndrome","secondary_identifiers":["GARD:10935","UMLS:C4304594","MEDGEN:930263","SCTID:719580004"],"synonyms":[{"name":"Del(16)(q24.3)","type":"exact"},{"name":"chromosome 16q24.3 microdeletion syndrome","type":"related"},{"name":"monosomy 16q24.3","type":"exact"}],"termid":"MONDO:0016838","xrefs":{"Monarch":{"xref_id":"0016838"}}}


id: GO:0045954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immunity","termid":"GO:0002717"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"activation of natural killer cell mediated cytotoxicity","type":"narrow"},{"name":"positive regulation of NK cell mediated cell death","type":"exact"},{"name":"positive regulation of NK cell mediated cell killing","type":"exact"},{"name":"positive regulation of NK cell mediated cytolysis","type":"related"},{"name":"positive regulation of NK cell mediated cytotoxicity","type":"exact"},{"name":"positive regulation of natural killer cell mediated cell death","type":"exact"},{"name":"positive regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"positive regulation of natural killer cell mediated cytolysis","type":"related"},{"name":"stimulation of natural killer cell mediated cytotoxicity","type":"narrow"},{"name":"up regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"up-regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"upregulation of natural killer cell mediated cytotoxicity","type":"exact"}],"termid":"GO:0045954"}


id: GO:1904509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:26115433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"regulation of protein localization to basolateral plasma membrane","termid":"GO:1904508"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"down regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"inhibition of protein localisation in basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localisation to basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localization in basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localization to basolateral plasma membrane","type":"narrow"},{"name":"negative regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"negative regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"negative regulation of protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1904509"}


id: MONDO:0009734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperinsulinemic hypoglycemia in which the cause of the disease is a mutation in the ABCC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia","termid":"MONDO:0005803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia, familial, 1","secondary_identifiers":["OMIM:256450","DOID:0070219","SCTID:360339005","UMLS:C2931832","MEDGEN:419505"],"synonyms":[{"name":"ABCC8 hyperinsulinemic hypoglycemia (disease)","type":"exact"},{"name":"HHF1","type":"related"},{"name":"Nesidioblastosis of pancreas","type":"related"},{"name":"hyperinsulinemic hypoglycemia (disease) caused by mutation in ABCC8","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to SUR1 deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to focal adenomatous hyperplasia","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 1","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, familial, type 1","type":"exact"},{"name":"hyperinsulinism, congenital","type":"related"},{"name":"hyperinsulinism, familial, with pancreatic Nesidioblastosis","type":"related"},{"name":"hypoglycemia, hyperinsulinemic, of infancy","type":"related"},{"name":"persistent hyperinsulinemic hypoglycemia of infancy","type":"related"}],"termid":"MONDO:0009734","xrefs":{"Monarch":{"xref_id":"0009734"}}}


id: PBO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 5","termid":"PBO:0042605"}


id: PATO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001184 maturity value (obsolete PATO:0001184)","termid":"PATO:0001184"}


id: GO:0010792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via single-strand annealing.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"DNA double-strand break processing involved in repair via single-strand annealing","termid":"GO:0010792"}


id: MONDO:1011406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hemolytic anemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia, non-human animal","termid":"MONDO:1012981"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune hemolytic anemia, non-human animal","secondary_identifiers":["OMIA:000432"],"termid":"MONDO:1011406","xrefs":{"Monarch":{"xref_id":"1011406"}}}


id: GO:0006793
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id: PBO:0083595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; almost completely overlaps YNL090W/RHO2 which encodes a small GTPase of the Rho/Rac subfamily of Ras-like proteins","termid":"PBO:0083595"}


id: PR:O94609
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like modifier-activating enzyme 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF4","OMA:SCHPO03896","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme E1 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.21c","secondary_identifiers":["UniProtKB:O94609"],"synonyms":[{"name":"Spom972h-UBA1","type":"exact"},{"name":"poly(A)+ RNA transport protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94609"}


id: MONDO:0014989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any uncombable hair syndrome in which the cause of the disease is a mutation in the TGM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"uncombable hair syndrome","termid":"MONDO:0008621"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncombable hair syndrome 2","secondary_identifiers":["GARD:16216","OMIM:617251","MEDGEN:934616","UMLS:C4310649"],"synonyms":[{"name":"TGM3 uncombable hair syndrome","type":"exact"},{"name":"UHS2","type":"exact"},{"name":"uncombable hair syndrome 2","type":"exact"},{"name":"uncombable hair syndrome 2; UHS2","type":"exact"},{"name":"uncombable hair syndrome caused by mutation in TGM3","type":"exact"},{"name":"uncombable hair syndrome type 2","type":"exact"}],"termid":"MONDO:0014989","xrefs":{"Monarch":{"xref_id":"0014989"}}}


id: SO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000292 repetitive_element (obsolete SO:0000292)","termid":"SO:0000292"}


id: PBO:0067977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 279","termid":"PBO:0067977"}


id: MONDO:0014889
data:
  {"annotated_genes":["SJAG_01236"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86476],"is_not":false,"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"striatonigral degeneration","termid":"MONDO:0003122"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005559","MONDO:0003441"],"is_obsolete":false,"name":"striatonigral degeneration, childhood-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310743","GARD:17918","OMIM:617054","Orphanet:497906","MEDGEN:934710"],"synonyms":[{"name":"Lenk-Ploski syndrome","type":"exact"},{"name":"SNDC","type":"exact"},{"name":"childhood-onset basal ganglia degeneration syndrome","type":"exact"},{"name":"striatonigral Degeneration, childhood-onset","type":"exact"},{"name":"striatonigral degeneration, childhood-onset; SNDC","type":"exact"}],"termid":"MONDO:0014889","terms_by_termid":{"MONDO:0014889":null},"xrefs":{"Monarch":{"xref_id":"0014889"}}}


id: PBO:0072560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding D","termid":"PBO:0072560"}


id: PBO:0027390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027390"}


id: FYPO:0008146
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119839,119837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[119838,119840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[119825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-coding RNA transcribed measured in a cell is higher than normal.","definition_xrefs":["PMID:25989903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"increased ncRNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"termid":"FYPO:0008146","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: PR:Q10451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.01","synonyms":[{"name":"Spom972h-ppr5","type":"exact"}],"termid":"PR:Q10451"}


id: PBO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta1","termid":"PBO:0048203"}


id: FYPO:0002688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles, but does not elongate. The spindle pole bodies fail to separate, and often become spatially closer together, suggesting that the spindle shrinks.","definition_xrefs":["PMID:23885124","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during prophase","synonyms":[{"name":"SPB convergence","type":"exact"},{"name":"broken mitotic spindle without elongation during prophase","type":"related"},{"name":"mitotic spindle breakage without elongation during prophase","type":"related"},{"name":"mitotic spindle collapse without elongation during prophase during vegetative growth","type":"exact"},{"name":"spindle collapse without elongation during mitotic prophase","type":"exact"},{"name":"spindle collapse without elongation during prophase during mitotic cell cycle","type":"related"},{"name":"spindle pole body convergence","type":"exact"}],"termid":"FYPO:0002688"}


id: PBO:0077119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 50","termid":"PBO:0077119"}


id: GO:1900740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway (obsolete GO:1900740)","synonyms":[{"name":"activation of insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"activation of protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"activation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway","type":"narrow"},{"name":"activation of protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"activation of protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"},{"name":"positive regulation of insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"positive regulation of protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"positive regulation of protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"positive regulation of protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"},{"name":"up regulation of insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"up regulation of protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"up regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway","type":"exact"},{"name":"up regulation of protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"up regulation of protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"},{"name":"up-regulation of insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"up-regulation of protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"up-regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"up-regulation of protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"},{"name":"upregulation of insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"upregulation of protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"upregulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway","type":"exact"},{"name":"upregulation of protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"upregulation of protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"}],"termid":"GO:1900740"}


id: PBO:0089063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop16","termid":"PBO:0089063"}


id: PBO:0056465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 3","termid":"PBO:0056465"}


id: GO:0071270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-butanol, an alkyl primary alcohol with the formula C4H10O.","definition_xrefs":["GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-butanol metabolic process","synonyms":[{"name":"1-butanol metabolism","type":"exact"},{"name":"butan-1-ol metabolic process","type":"exact"},{"name":"butanol metabolic process","type":"broad"}],"termid":"GO:0071270"}


id: PBO:0039610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR like","termid":"PBO:0039610"}


id: PBO:0046444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 3","termid":"PBO:0046444"}


id: PBO:0088183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc cluster transcription factor that regulates respiratory growth; binds to promoters of genes involved in respiration, gluconeogenesis, and the glyoxylate shunt; required for normal carbon source utilization and adaptation to pH, osmotic and ethanol stress especially during non-fermentative metabolism","termid":"PBO:0088183"}


id: SO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with either a single protein product, or for which the regions encoding all its protein products overlap.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"monocistronic_transcript","termid":"SO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Monocistronic_mRNA"],"synonyms":[{"name":"monocistronic mRNA","type":"exact"},{"name":"monocistronic processed transcript","type":"exact"}],"termid":"SO:0000633"}


id: GO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes.","definition_xrefs":["PMID:2279698","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem cell division","secondary_identifiers":["GO:0048131"],"synonyms":[{"name":"germ-line stem cell renewal","type":"exact"}],"termid":"GO:0042078"}


id: PBO:0056642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 3","termid":"PBO:0056642"}


id: GO:0008972
data:
  {"annotated_genes":["SJAG_02420","SJAG_04282","SJAG_02421"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70519,74295,74374],"is_not":false,"summary":null,"term":"GO:0008972"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-amino-2-methyl-5-phosphomethylpyrimidine = ADP + 4-amino-2-methyl-5-diphosphomethylpyrimidine.","definition_xrefs":["EC:2.7.4.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02420":null,"SJAG_02421":null,"SJAG_04282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphomethylpyrimidine kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PYRIMSYN3-RXN","RHEA:19893"],"synonyms":[{"name":"ATP:4-amino-2-methyl-5-phosphomethylpyrimidine phosphotransferase activity","type":"related"},{"name":"hydroxymethylpyrimidine phosphokinase activity","type":"related"}],"termid":"GO:0008972","terms_by_termid":{"GO:0008972":null}}


id: MONDO:0009964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the IFT140 gene on chromosome 16p13.","definition_xrefs":["PMID:22503633","DOID:0110097"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"},{"relation_name":"is_a","term_name":"IFT140-related recessive ciliopathy","termid":"MONDO:0100509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 9 with or without polydactyly","secondary_identifiers":["MEDGEN:341455","Orphanet:140969","UMLS:C1849437","OMIM:266920","SCTID:254092004","GARD:15227","ICD9:759.89"],"synonyms":[{"name":"Conorenal syndrome","type":"exact"},{"name":"Mainzer Saldino syndrome","type":"exact"},{"name":"Mainzer-Saldino syndrome","type":"exact"},{"name":"SRTD9","type":"exact"},{"name":"Saldino-Mainzer syndrome","type":"exact"},{"name":"renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia and skeletal dysplasia","type":"exact"},{"name":"renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia, and skeletal dysplasia","type":"related"},{"name":"renal dysplasia-retinal pigmentary dystrophy-cerebellar ataxia-skeletal dysplasia syndrome","type":"exact"},{"name":"short-rib thoracic dysplasia 9 with or without polydactyly","type":"exact"}],"termid":"MONDO:0009964","xrefs":{"Monarch":{"xref_id":"0009964"}}}


id: PBO:0015263
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with noncoding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015263"}


id: PBO:0050336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1pseudogene 38","termid":"PBO:0050336"}


id: PATO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/obconical"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conical","termid":"PATO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obconical","termid":"PATO:0002347"}


id: PBO:0088286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1774 family multi-spanning conserved fungal membrane protein","termid":"PBO:0088286"}


id: GO:2000332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood microparticle formation","synonyms":[{"name":"regulation of microparticle generation","type":"exact"},{"name":"regulation of microparticle release","type":"exact"}],"termid":"GO:2000332"}


id: MONDO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasomnia characterized by paroxysmal episodes of choreoathetotic, ballistic, dystonic movements, and semipurposeful activity. The episodes occur during non-rapid eye movement sleep and typically recur several times per night.","definition_xrefs":["MESH:D020183","PMID:1630641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"},{"relation_name":"is_a","term_name":"sleep disorder","termid":"MONDO:0100081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"nocturnal paroxysmal dystonia","secondary_identifiers":["UMLS:C0393777","SCTID:230500006","MEDGEN:95991"],"synonyms":[{"name":"dystonia, hypnogenic paroxysmal","type":"exact"},{"name":"dystonia, nocturnal paroxysmal","type":"exact"},{"name":"dystonia, nocturnal, paroxysmal","type":"exact"},{"name":"dystonia, sleep-related","type":"exact"},{"name":"dystonias, hypnogenic paroxysmal","type":"exact"},{"name":"dystonias, nocturnal paroxysmal","type":"exact"},{"name":"dystonias, sleep-related","type":"exact"},{"name":"hypnogenic paroxysmal dystonia","type":"exact"},{"name":"hypnogenic paroxysmal dystonias","type":"exact"},{"name":"nocturnal paroxysmal dystonias","type":"exact"},{"name":"paroxysmal dystonia, hypnogenic","type":"exact"},{"name":"paroxysmal dystonia, nocturnal","type":"exact"},{"name":"paroxysmal dystonias, hypnogenic","type":"exact"},{"name":"paroxysmal dystonias, nocturnal","type":"exact"},{"name":"sleep related dystonia","type":"related"},{"name":"sleep-related dystonia","type":"related"},{"name":"sleep-related dystonias","type":"related"}],"termid":"MONDO:0043969","xrefs":{"Monarch":{"xref_id":"0043969"}}}


id: PBO:0114428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA EGFL7 opposite strand","termid":"PBO:0114428"}


id: PBO:0091397
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene replaced SPAC823.02 which was previously annotated at this locus in the incorrect frame","termid":"PBO:0091397"}


id: GO:1903653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts cell motility in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25049409","GOC:TermGenie","GO_REF:0000063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell motility","synonyms":[{"name":"modulation by symbiont of host cell locomotion","type":"exact"},{"name":"modulation by symbiont of host cell motility","type":"exact"},{"name":"modulation by symbiont of host cell movement","type":"related"},{"name":"regulation by symbiont of host cell motility","type":"exact"}],"termid":"GO:1903653"}


id: PBO:0029663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endodeoxyribonuclease_activity","termid":"PBO:0029663"}


id: MONDO:0017553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humero-ulnar synostosis","termid":"MONDO:0019782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-ulnar synostosis, bilateral","secondary_identifiers":["UMLS:C5438980","GARD:21220","icd11.foundation:1331627150","MEDGEN:1776945","Orphanet:295215"],"synonyms":[{"name":"humero-ulnar fusion, bilateral","type":"exact"}],"termid":"MONDO:0017553","xrefs":{"Monarch":{"xref_id":"0017553"}}}


id: FYPO:0005534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in telomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"},{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H4-K16 acetylation at telomere during vegetative growth","synonyms":[{"name":"decreased histone H4-K16 acetylation at telomere during mitotic cell cycle","type":"related"},{"name":"reduced histone H4-K16 acetylation at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005534"}


id: PBO:0034381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_synthesis_of","termid":"PBO:0034381"}


id: MONDO:0008017
data:
  {"annotated_genes":["SJAG_02326","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86018,86019],"is_not":false,"summary":null,"term":"MONDO:0008017"}]},"cv_name":"mondo","definition":"A condition that affects the skin, hair, mucosa (areas ofthe body that are lined with mucus), gums (gingiva), eyes, nose and lungs. Symptoms typically begin in infancy and may include development of cataracts (clouding of the eye lens); blindness; hair loss (alopecia); abnormal changes to the perineum (the area between the anus and external genitalia); and small, skin-colored bumps (keratosis pilaris). Terminal lung disease has also been reported. The cause of HMD is thought to be an abnormality in desmosomes and gap junctions, which are structures involved in cell-to-cell contact. HMD typically follows autosomal dominant inheritance, but has occurred sporadically (in an individual who has no family history of the condition). Treatment typically focuses on individual symptoms of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary mucoepithelial dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5427","icd11.foundation:1167609602","ICD9:478.79","SCTID:403442005","Orphanet:1839","UMLS:C1274795","MEDGEN:220887","OMIM:158310","MESH:C536476"],"synonyms":[{"name":"HMD","type":"exact"},{"name":"Urban-Schosser-Spohn syndrome","type":"exact"},{"name":"mucoepithelial dysplasia, hereditary","type":"exact"}],"termid":"MONDO:0008017","terms_by_termid":{"MONDO:0008017":null},"xrefs":{"Monarch":{"xref_id":"0008017"}}}


id: GO:0008111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-methylacyl-CoA = (2R)-2-methylacyl-CoA.","definition_xrefs":["EC:5.1.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase activity","secondary_identifiers":["Reactome:R-HSA-192056","Reactome:R-HSA-193452","MetaCyc:5.1.99.4-RXN","Reactome:R-HSA-193736","Reactome:R-HSA-193763","Reactome:R-HSA-389897","RHEA:12657"],"synonyms":[{"name":"2-methylacyl-CoA 2-epimerase activity","type":"related"}],"termid":"GO:0008111"}


id: PBO:0027017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomeric_repeat_sequence","termid":"PBO:0027017"}


id: GO:0015159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}


id: PBO:0044280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 3","termid":"PBO:0044280"}


id: GO:0110088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that occurs in a hippocampal neuron.","definition_xrefs":["GOC:sl","PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}


id: PBO:0111650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller SMARCAD1 family Fft2","termid":"PBO:0111650"}


id: PBO:0089551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27","termid":"PBO:0089551"}


id: PBO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar to fragment of cox1 intron protein","termid":"PBO:0003023"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: MONDO:0044271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone mineral density quantitative trait locus 1 (obsolete MONDO:0044271)","secondary_identifiers":["OMIM:601884"],"synonyms":[{"name":"BMND1","type":"related"},{"name":"bone mineral density quantitative trait locus 1","type":"related"},{"name":"bone mineral density variability 1","type":"exact"},{"name":"high bone Mass","type":"related"},{"name":"osteoporosis, susceptibility to","type":"related"}],"termid":"MONDO:0044271","xrefs":{"Monarch":{"xref_id":"0044271"}}}


id: PR:G2TRK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2H10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2H10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2H10.04","synonyms":[{"name":"Spom972h-SPAC2H10.04","type":"exact"}],"termid":"PR:G2TRK3"}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: GO:0045545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to syndecan, an integral membrane proteoglycan (250-300 kDa) associated largely with epithelial cells.","definition_xrefs":["PMID:9355727","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"syndecan binding","termid":"GO:0045545"}


id: PBO:0080798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 4","termid":"PBO:0080798"}


id: PBO:0051597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 22 receptor subunit alpha 1","termid":"PBO:0051597"}


id: PBO:0077430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167A pseudogene 1","termid":"PBO:0077430"}


id: PBO:0059746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 20","termid":"PBO:0059746"}


id: GO:1905261
data:
  {"annotated_genes":["SJAG_03720","SJAG_03048","SJAG_00100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102695,108673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[116536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["PMID:26653857","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation","termid":"GO:1903341"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0140013","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905261","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: MONDO:0012825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant soft tissue neoplasm of uncertain differentiation, characterized by the presence of chondroblast-like cells in a myxoid stroma and a multinodular growth pattern. The most common sites of involvement are the deep soft tissues of the extremities, particularly the thigh. It usually presents as an enlarging soft tissue mass. Patients may have long survivals, but local recurrences and metastases occur in approximately half of the cases. The most common site of metastasis is the lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extraskeletal myxoid chondrosarcoma","secondary_identifiers":["OMIM:612237","GARD:17105","MESH:C563195","ICD9:171.9","DOID:6496","MEDGEN:220892","ONCOTREE:EMCHS","SCTID:404079008","UMLS:C1275278","Orphanet:209916","NCIT:C27502"],"synonyms":[{"name":"EMC","type":"related"},{"name":"chondrosarcoma, extraskeletal myxoid","type":"related"},{"name":"extraosseous chondrosarcoma","type":"exact"},{"name":"extraskeletal chondrosarcoma","type":"exact"},{"name":"myxoid extraosseous chondrosarcoma","type":"exact"},{"name":"myxoid extraskeletal chondrosarcoma","type":"exact"}],"termid":"MONDO:0012825","xrefs":{"Monarch":{"xref_id":"0012825"}}}


id: GO:0072197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ureter are generated and organized. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter morphogenesis","termid":"GO:0072197"}


id: MONDO:0019655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"sporadic idiopathic steroid-resistant nephrotic syndrome with focal segmental hyalinosis","secondary_identifiers":["Orphanet:93218"],"synonyms":[{"name":"sporadic idiopathic steroid-resistant nephrotic syndrome with focal segmental glomerulosclerosis","type":"exact"}],"termid":"MONDO:0019655","xrefs":{"Monarch":{"xref_id":"0019655"}}}


id: PR:Q10283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-hydroxy-3-methylglutaryl-coenzyme A reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10572:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-coenzyme A reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.09c","secondary_identifiers":["UniProtKB:Q10283"],"synonyms":[{"name":"HMG-CoA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC162.09c","type":"related"},{"name":"Spom972h-HMGCR","type":"exact"},{"name":"its12","type":"related"}],"termid":"PR:Q10283"}


id: PBO:0055389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2819","termid":"PBO:0055389"}


id: MONDO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ketoadipicaciduria (obsolete MONDO:0009494)","termid":"MONDO:0009494","xrefs":{"Monarch":{"xref_id":"0009494"}}}


id: GO:0004911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-2 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-2 receptor activity","synonyms":[{"name":"IL-2 receptor activity","type":"exact"},{"name":"IL-2R","type":"exact"}],"termid":"GO:0004911"}


id: MONDO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of microscopic colitis of unknown etiology. It is characterized by the presence of collagen deposits in the lamina propria of the colonic mucosa. Patients present with chronic watery diarrhea. Colonoscopy reveals normal-appearing mucosa. The diagnosis is made with the microscopic examination of the colonic biopsy samples.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microscopic colitis","termid":"MONDO:0000702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"collagenous colitis","secondary_identifiers":["DOID:0060183","NCIT:C27021","ICD10CM:K52.831","Orphanet:36205","icd11.foundation:1322041450","MEDGEN:65945","ICD9:558.9","UMLS:C0238067","SCTID:19311003","EFO:1001293","MedDRA:10048928","MESH:D046729"],"termid":"MONDO:0000703","xrefs":{"Monarch":{"xref_id":"0000703"}}}


id: GO:0070352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fat cell proliferation","termid":"GO:0070346"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"positively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of white fat cell proliferation","synonyms":[{"name":"activation of white fat cell proliferation","type":"narrow"},{"name":"positive regulation of white adipocyte proliferation","type":"exact"},{"name":"positive regulation of white adipose cell proliferation","type":"exact"},{"name":"stimulation of white fat cell proliferation","type":"narrow"},{"name":"up regulation of white fat cell proliferation","type":"exact"},{"name":"up-regulation of white fat cell proliferation","type":"exact"},{"name":"upregulation of white fat cell proliferation","type":"exact"}],"termid":"GO:0070352"}


id: PBO:0110831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor, glucose sensing, Scr1","termid":"PBO:0110831"}


id: PBO:0029574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination_(obsolete_FYPO:0002147)","termid":"PBO:0029574"}


id: FYPO:0004783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000641"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}


id: GO:0035756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont moves from one side of an epithelium to the other within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:10639460","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated migration across host tissue barrier","termid":"GO:0141142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated migration across host transepithelium","synonyms":[{"name":"migration in host through an epithelial cell layer","type":"exact"},{"name":"migration of symbiont within host by transepithelial trafficking","type":"exact"},{"name":"symbiont-mediated migration through host transepithelium","type":"exact"},{"name":"transepithelial migration of symbiont in host","type":"exact"},{"name":"transmigration of symbiont in host","type":"related"}],"termid":"GO:0035756"}


id: GO:1901560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a purvalanol A stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to purvalanol A","termid":"GO:1901560"}


id: PBO:0043390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymase 1","termid":"PBO:0043390"}


id: GO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:dph","GOC:add","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle derived foam cell differentiation","termid":"GO:0090078"}


id: PBO:0054914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2328","termid":"PBO:0054914"}


id: PBO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 1 pseudogene 1","termid":"PBO:0050584"}


id: MONDO:1010229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, non-human animal","secondary_identifiers":["OMIA:000312"],"termid":"MONDO:1010229","xrefs":{"Monarch":{"xref_id":"1010229"}}}


id: PBO:0031459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cycloheximide","termid":"PBO:0031459"}


id: PBO:0113039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide binding protein; putative ceramide transfer protein involved in the nonvesicular transport of ceramides between the endoplasmic reticulum and Golgi apparatus; contributes to sphingolipid biosynthesis at the cis-Golgi; localizes to the cis-Golgi and the cytoplasm; required for the diauxic growth shift; promotes survival in mammalian cells under apoptosis-inducing conditions; mutant has increased aneuploidy tolerance","termid":"PBO:0113039"}


id: PR:O14222
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsv1 gene.","definition_xrefs":["UniProtKB:O14222","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein fsv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.03c","synonyms":[{"name":"Spom972h-fsv1","type":"exact"}],"termid":"PR:O14222"}


id: GO:0005835
data:
  {"annotated_genes":["SJAG_04972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58544,72635],"is_not":false,"summary":null,"term":"GO:0005835"}]},"cv_name":"cellular_component","definition":"A multienzyme complex that catalyses the synthesis of fatty acids from acetyl CoA.","definition_xrefs":["GOC:sgd_curators","ISBN:0716746840","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fatty acid synthase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Fatty_acid_synthetase_complex","GO:0031373","GO:0031374"],"synonyms":[{"name":"FAS complex","type":"exact"},{"name":"cytosolic FAS complex","type":"exact"},{"name":"cytosolic fatty acid synthase complex","type":"exact"},{"name":"cytosolic type I FAS complex","type":"exact"},{"name":"cytosolic type I fatty acid synthase complex","type":"exact"},{"name":"fatty acid synthetase complex","type":"exact"},{"name":"holo-[acyl-carrier-protein] synthase complex","type":"related"}],"termid":"GO:0005835","terms_by_termid":{"GO:0005835":null}}


id: GO:0090475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibasic protein processing","termid":"GO:0090472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"lys-lys specific dibasic protein processing","termid":"GO:0090475"}


id: MONDO:1012716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in horses with a XY karyotype.","definition_xrefs":["OMIA:001601-9796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, horse","termid":"MONDO:1012716","xrefs":{"Monarch":{"xref_id":"1012716"}}}


id: MONDO:0100261
data:
  {"annotated_genes":["SJAG_04763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013948"},{"annotations":[87233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054549"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0006025","MONDO:0005559","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX3 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX3 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX3 defect","type":"exact"}],"termid":"MONDO:0100261","terms_by_termid":{"MONDO:0013948":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0100261"}}}


id: MONDO:0004990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subsets of breast carcinoma defined by expression of genes characteristic of luminal epithelial cells.","definition_xrefs":["NCIT:C53555","NCIT:C53554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast tumor luminal A or B","secondary_identifiers":["DOID:0060548","EFO:0000306"],"synonyms":[{"name":"breast tumor luminal","type":"exact"},{"name":"breast tumour luminal","type":"exact"},{"name":"luminal breast cancer","type":"exact"},{"name":"luminal breast carcinoma","type":"related"}],"termid":"MONDO:0004990","xrefs":{"Monarch":{"xref_id":"0004990"}}}


id: PBO:0039528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 9","termid":"PBO:0039528"}


id: PBO:0059636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 2","termid":"PBO:0059636"}


id: PBO:0078807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 24-1","termid":"PBO:0078807"}


id: MONDO:0007492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare movement disorder characterized by involuntary, repetitive, sustained muscle contractions or postures involving one or more sites of the body.","definition_xrefs":["Orphanet:256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset generalized dystonia","termid":"MONDO:0100016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"early-onset generalized limb-onset dystonia","secondary_identifiers":["DOID:0060730","OMIM:128100","UMLS:C1851945","MESH:C538005","MEDGEN:338823","NANDO:1200512","MONDO:0023033","GARD:2027","NANDO:2200884","NCIT:C116718","NANDO:2100240"],"synonyms":[{"name":"DYT-TOR1A","type":"exact"},{"name":"DYT-TOR1A dystonia","type":"related"},{"name":"DYT1","type":"exact"},{"name":"Dyt1","type":"related"},{"name":"EOTD","type":"exact"},{"name":"Early-onset Primary dystonia","type":"related"},{"name":"Early-onset torsion dystonia","type":"related"},{"name":"Oppenheim dystonia","type":"exact"},{"name":"Oppenheim's dystonia","type":"exact"},{"name":"Primary torsion dystonia","type":"related"},{"name":"dystonia 1","type":"related"},{"name":"dystonia 1, torsion, Autosomal dominant","type":"related"},{"name":"dystonia 1, torsion, autosomal dominant","type":"related"},{"name":"dystonia musculorum deformans","type":"exact"},{"name":"dystonia musculorum deformans 1","type":"related"},{"name":"dystonia-1, torsion","type":"exact"},{"name":"early onset primary dystonia","type":"exact"},{"name":"early onset torsion dystonia","type":"exact"},{"name":"early-onset generalised torsion dystonia","type":"exact"},{"name":"early-onset generalized limb-onset dystonia","type":"exact"},{"name":"early-onset generalized torsion dystonia","type":"exact"},{"name":"early-onset primary dystonia","type":"exact"},{"name":"early-onset torsion dystonia","type":"exact"},{"name":"idiopathic dystonia","type":"exact"},{"name":"idiopathic dystonia DYT1","type":"related"},{"name":"idiopathic torsion dystonia","type":"related"},{"name":"torsion dystonia 1","type":"related"},{"name":"torsion dystonia 1, autosomal dominant","type":"related"},{"name":"torsion dystonia type 1","type":"exact"}],"termid":"MONDO:0007492","xrefs":{"Monarch":{"xref_id":"0007492"}}}


id: GO:0034250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"positively_regulates","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amide metabolic process","synonyms":[{"name":"positive regulation of amide metabolism","type":"exact"},{"name":"positive regulation of cellular amide metabolic process","type":"exact"}],"termid":"GO:0034250"}


id: MONDO:0020446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary sinus stenosis","secondary_identifiers":["UMLS:C0344684","Orphanet:99117","MEDGEN:576420","GARD:19658"],"termid":"MONDO:0020446","xrefs":{"Monarch":{"xref_id":"0020446"}}}


id: PBO:0027569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_septated_mononucleate_cell","termid":"PBO:0027569"}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: MONDO:0009686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musk, inability to smell","secondary_identifiers":["MESH:C564980","UMLS:C1850807","OMIM:254150","MEDGEN:342594"],"synonyms":[{"name":"musk, inability to smell","type":"exact"}],"termid":"MONDO:0009686","xrefs":{"Monarch":{"xref_id":"0009686"}}}


id: MONDO:1012596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in humpback whales due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, humpback whale","secondary_identifiers":["OMIA:000202-9773"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Megaptera novaeangliae (humpback whale)","type":"exact"}],"termid":"MONDO:1012596","xrefs":{"Monarch":{"xref_id":"1012596"}}}


id: PBO:0080507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0080507"}


id: MONDO:0020284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heart position anomaly (obsolete MONDO:0020284)","secondary_identifiers":["Orphanet:98716"],"termid":"MONDO:0020284","xrefs":{"Monarch":{"xref_id":"0020284"}}}


id: GO:0106266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trihydroxyphenylhexan-1-one + chloride + FADH2 + O2 = (3-chloro-2,4,6-trihydroxyphenyl)hexan-1-one + FAD + H+ + 2 H2O.","definition_xrefs":["PMID:20231486","RHEA:64356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-chloro THPH synthase activity","termid":"GO:0106266"}


id: GO:2000815
data:
  {"annotated_genes":["SJAG_05014","SJAG_03886","SJAG_02573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90141,90533,91863],"is_not":false,"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"A process of regulation of mRNA stability that is involved in a response to oxidative stress.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability involved in response to stress","termid":"GO:0010610"},{"relation_name":"part_of","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to oxidative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000815","terms_by_termid":{"GO:2000815":null}}


id: PBO:0035819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization","termid":"PBO:0035819"}


id: GO:1903859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite extension.","definition_xrefs":["GOC:PARL","GOC:pad","PMID:24898855","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite extension","termid":"GO:1903859"}


id: GO:0043738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanophenazine + reduced coenzyme F420 = dihydromethanophenazine + coenzyme F420.","definition_xrefs":["RHEA:54752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"reduced coenzyme F420 dehydrogenase activity","secondary_identifiers":["EC:1.5.98.3","MetaCyc:RXN-8106"],"synonyms":[{"name":"1,5-dihydrocoenzyme F420 dehydrogenase activity","type":"exact"},{"name":"F420H2 dehydrogenase activity","type":"exact"}],"termid":"GO:0043738"}


id: PBO:0054350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1743","termid":"PBO:0054350"}


id: PBO:0005088
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CSL response element 5'-GTG[G/A]GAA-3'","termid":"PBO:0005088"}


id: PBO:0034123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_reversal_relationship_with","termid":"PBO:0034123"}


id: PATO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001113 absolute energy value (obsolete PATO:0001113)","termid":"PATO:0001113"}


id: PBO:0005151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap1","termid":"PBO:0005151"}


id: GO:0048737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an appendage over time, from its formation in the imaginal disc to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived appendage development","termid":"GO:0048737"}


id: PBO:0068105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 412","termid":"PBO:0068105"}


id: PBO:0057554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 670","termid":"PBO:0057554"}


id: PR:Q10355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C22E12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.02","secondary_identifiers":["UniProtKB:Q10355"],"synonyms":[{"name":"Spom972h-RBM7","type":"exact"}],"termid":"PR:Q10355"}


id: PBO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 47","termid":"PBO:0045857"}


id: PBO:0109030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHCR7 divergent transcript","termid":"PBO:0109030"}


id: PBO:0068687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 68, pseudogene","termid":"PBO:0068687"}


id: PBO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 4","termid":"PBO:0060655"}


id: PBO:0081135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP28 divergent transcript","termid":"PBO:0081135"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: GO:0097183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor XI (F11); formation of the complex inhibits the serine protease activity of coagulation factor XI.","definition_xrefs":["PMID:2844223","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor XI complex","synonyms":[{"name":"PCI-coagulation factor XI complex","type":"exact"},{"name":"SERPINA5-coagulation factor XI complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor XI complex","type":"exact"},{"name":"protein C inhibitor-F11 complex","type":"exact"},{"name":"serpin A5-coagulation factor XI complex","type":"exact"}],"termid":"GO:0097183"}


id: PBO:0030659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Man8GlcNAc_level","termid":"PBO:0030659"}


id: PBO:0048725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 8 domain containing 1","termid":"PBO:0048725"}


id: PBO:0059515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded long non-coding cardiac associated RNA","termid":"PBO:0059515"}


id: MONDO:0019194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localised lipodystrophies are characterized by loss of subcutaneous tissue from small regions of the body.","definition_xrefs":["Orphanet:79088"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"localized lipodystrophy","secondary_identifiers":["GARD:5867","NCIT:C131814","UMLS:C4329999","MEDGEN:1385527"],"synonyms":[{"name":"centrifugal lipodystrophy (subtype)","type":"related"},{"name":"drug-induced localised lipodystrophy (subtype)","type":"related"},{"name":"drug-induced localized lipodystrophy (subtype)","type":"related"},{"name":"focal lipodystrophy","type":"exact"},{"name":"idiopathic localised lipodystrophy (subtype)","type":"related"},{"name":"idiopathic localized lipodystrophy (subtype)","type":"related"},{"name":"panniculitis and localised lipodystrophy (subtype)","type":"related"},{"name":"panniculitis and localized lipodystrophy (subtype)","type":"related"},{"name":"pressure-induced localised lipoatrophy (subtype)","type":"related"},{"name":"pressure-induced localized lipoatrophy (subtype)","type":"related"}],"termid":"MONDO:0019194","xrefs":{"Monarch":{"xref_id":"0019194"}}}


id: PBO:0086516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; not conserved in closely related Saccharomyces species; multicopy suppressor of glucose transport defects, likely due to the presence of an HXT4 regulatory element in the region","termid":"PBO:0086516"}


id: FYPO:0002806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenate ions. Cells stop growing (and may die) at a concentration of arsenate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to arsenate","synonyms":[{"name":"hypersensitive to arsenate","type":"exact"},{"name":"sensitive to arsenate during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenate during vegetative growth","type":"exact"},{"name":"sensitive to arsenate ions","type":"exact"}],"termid":"FYPO:0002806"}


id: PR:P78813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ent3 gene.","definition_xrefs":["UniProtKB:P78813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C794.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.11c","synonyms":[{"name":"Spom972h-ent3","type":"exact"}],"termid":"PR:P78813"}


id: PR:000044798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 42 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 42 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC110.03","synonyms":[{"name":"SPAC110.03","type":"related"},{"name":"Spom-cdc2","type":"exact"}],"termid":"PR:000044798"}


id: MONDO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-infectious or infectious inflammatory process affecting the vagina.","definition_xrefs":["NCIT:C26911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginitis","secondary_identifiers":["UMLS:C0042267","HP:0030683","ICD9:616.1","icd11.foundation:290861382","MESH:D014627","SCTID:30800001","ICD9:616.10","MEDGEN:21815","DOID:2170"],"synonyms":[{"name":"inflammation of vagina","type":"exact"},{"name":"vagina inflammation","type":"exact"},{"name":"vaginal Inflammation","type":"exact"},{"name":"vaginal inflammation","type":"exact"},{"name":"vaginitis","type":"exact"},{"name":"vaginitis (disease)","type":"exact"}],"termid":"MONDO:0002234","xrefs":{"Monarch":{"xref_id":"0002234"}}}


id: PBO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, S (pseudogene)","termid":"PBO:0050052"}


id: PBO:0076269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse associated protein 1","termid":"PBO:0076269"}


id: GO:0018730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (E)-glutaconate = acetate + glutaconyl-1-CoA.","definition_xrefs":["EC:2.8.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"glutaconate CoA-transferase activity","secondary_identifiers":["UM-BBD_reactionID:r0085","RHEA:23208","MetaCyc:GLUTACONATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:(E)-glutaconate CoA-transferase activity","type":"related"}],"termid":"GO:0018730"}


id: PBO:0083846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hMtr3p (EXOSC6)","termid":"PBO:0083846"}


id: PBO:0072418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 23","termid":"PBO:0072418"}


id: GO:1900132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of lipid binding.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lipid binding (obsolete GO:1900132)","synonyms":[{"name":"activation of lipid binding","type":"narrow"},{"name":"up regulation of lipid binding","type":"exact"},{"name":"up-regulation of lipid binding","type":"exact"},{"name":"upregulation of lipid binding","type":"exact"}],"termid":"GO:1900132"}


id: MONDO:0014504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the TWNK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0006025","MONDO:0005047","MONDO:0005066"],"is_obsolete":false,"name":"Perrault syndrome 5","secondary_identifiers":["UMLS:C4015307","OMIM:616138","MEDGEN:863744","GARD:16062"],"synonyms":[{"name":"PRLTS5","type":"related"},{"name":"Perrault syndrome 5","type":"exact"},{"name":"Perrault syndrome caused by mutation in TWNK","type":"exact"},{"name":"Perrault syndrome type 5","type":"exact"},{"name":"TWNK Perrault syndrome","type":"exact"}],"termid":"MONDO:0014504","xrefs":{"Monarch":{"xref_id":"0014504"}}}


id: MOD:00408
data:
  {"annotated_genes":["SJAG_02522","SJAG_00733"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[81079,80995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with an acetyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"is_obsolete":false,"name":"N-acetylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"N-Acetyl","type":"exact"},{"name":"N-Acetylation","type":"exact"},{"name":"NAcRes","type":"exact"}],"termid":"MOD:00408","terms_by_termid":{"MOD:00050":null}}


id: PBO:0064933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-protein thioesterase 2","termid":"PBO:0064933"}


id: PBO:0051294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-17","termid":"PBO:0051294"}


id: MONDO:0005680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A delayed relapse of epidemic typhus, caused by Rickettsia prowazekii.","definition_xrefs":["Wikipedia:Brill%E2%80%93Zinsser_disease"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"typhoid fever","termid":"MONDO:0005619"},{"relation_name":"is_a","term_name":"epidemic louse-borne typhus","termid":"MONDO:0019362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brill-Zinsser disease","secondary_identifiers":["Orphanet:99990","MEDGEN:2730","icd11.foundation:1961511435","SCTID:47761007","GARD:19725","EFO:0007182","UMLS:C0006181","DOID:11254","ICD9:081.1"],"synonyms":[{"name":"Brill Zinsser disease","type":"exact"},{"name":"Brill disease","type":"exact"},{"name":"Brill's disease","type":"exact"},{"name":"latent typhus","type":"related"},{"name":"recrudescent typhus","type":"exact"},{"name":"sporadic typhus","type":"related"}],"termid":"MONDO:0005680","xrefs":{"Monarch":{"xref_id":"0005680"}}}


id: PBO:0055255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2682","termid":"PBO:0055255"}


id: MONDO:0958268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic congenital bronchial atresia","secondary_identifiers":["Orphanet:649010","UMLS:C5816738","MEDGEN:1853136"],"termid":"MONDO:0958268","xrefs":{"Monarch":{"xref_id":"0958268"}}}


id: PBO:0081590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 divergent transcript","termid":"PBO:0081590"}


id: GO:0141198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at various positions of the ubiquitin monomers, forming branched linkages, such as K11/K48- or K11/K63-linked chains.","definition_xrefs":["PMID:29033132","PMID:37325469","PMID:31998699","PMID:29378950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein branched polyubiquitination","termid":"GO:0141198"}


id: MONDO:1011224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion, non-human animal","termid":"MONDO:1010322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectropion, dog","secondary_identifiers":["OMIA:000325-9615"],"termid":"MONDO:1011224","xrefs":{"Monarch":{"xref_id":"1011224"}}}


id: CHEBI:28304
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin","termid":"CHEBI:28304"}


id: GO:0048026
data:
  {"annotated_genes":["SJAG_02018","SJAG_02058","SJAG_00996","SJAG_01919","SJAG_03279","SJAG_01040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74434,75693,92500,111238],"is_not":false,"summary":null,"term":"GO:0048026"},{"annotations":[89815,118714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA splicing","termid":"GO:0033120"},{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"is_a","term_name":"positive regulation of mRNA processing","termid":"GO:0050685"},{"relation_name":"positively_regulates","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0035057"],"synonyms":[{"name":"activation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"activation of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"positive regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"positive regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"positive regulation of pre-mRNA splicing","type":"broad"},{"name":"stimulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"stimulation of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"up regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"up regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"up-regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"up-regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"upregulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"upregulation of nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"GO:0048026","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: PBO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall 1,3-beta-glucanosyltransferase Gas4","termid":"PBO:0090723"}


id: GO:0048134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single gonial founder cell.","definition_xrefs":["GOC:jid","PMID:21681920","PMID:10370240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line cyst formation","synonyms":[{"name":"germline cyst formation","type":"exact"}],"termid":"GO:0048134"}


id: GO:0035124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic caudal fin morphogenesis","termid":"GO:0035124"}


id: PATO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased size","synonyms":[{"name":"hypoplasia","type":"narrow"},{"name":"reduced","type":"related"},{"name":"small","type":"related"},{"name":"tiny","type":"related"},{"name":"underdeveloped","type":"narrow"}],"termid":"PATO:0000587"}


id: MONDO:0017977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development of gynecological interest (obsolete MONDO:0017977)","secondary_identifiers":["Orphanet:325632"],"synonyms":[{"name":"46,XY DSD of gynecological interest","type":"exact"}],"termid":"MONDO:0017977","xrefs":{"Monarch":{"xref_id":"0017977"}}}


id: PBO:0027447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_okadaic_acid","termid":"PBO:0027447"}


id: PBO:0064351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin C1","termid":"PBO:0064351"}


id: PBO:0077249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 2","termid":"PBO:0077249"}


id: GO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydropipecolic acid + NAD(P)H + H+ = L-pipecolic acid + NAD(P)+.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dehydropipecolic acid reductase","termid":"GO:0062046"}


id: PBO:0042520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 1","termid":"PBO:0042520"}


id: GO:0045712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of larval salivary gland boundary specification","termid":"GO:0045708"},{"relation_name":"positively_regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval salivary gland boundary specification","synonyms":[{"name":"activation of larval salivary gland determination","type":"narrow"},{"name":"positive regulation of larval salivary gland determination","type":"exact"},{"name":"stimulation of larval salivary gland determination","type":"narrow"},{"name":"up regulation of larval salivary gland determination","type":"exact"},{"name":"up-regulation of larval salivary gland determination","type":"exact"},{"name":"upregulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045712"}


id: GO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-3 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-5.","definition_xrefs":["PMID:11839579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"interleukin-3 receptor complex","synonyms":[{"name":"IL-3 receptor complex","type":"exact"}],"termid":"GO:0005894"}


id: PBO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_uracil","termid":"PBO:0030725"}


id: PBO:0084007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen branching enzyme, involved in glycogen accumulation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress; glycogen accumulation defect of the null mutant is functionally complemented by human GBE1, which is associated with glycogen storage disease","termid":"PBO:0084007"}


id: PBO:0063376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 2, ethanolamine","termid":"PBO:0063376"}


id: PBO:0062896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 2","termid":"PBO:0062896"}


id: PR:Q9P7W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P protein subunit p29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13348:SF0","OMA:SCHPO03472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.01c","secondary_identifiers":["UniProtKB:Q9P7W9"],"synonyms":[{"name":"Spom972h-POP4","type":"exact"}],"termid":"PR:Q9P7W9"}


id: MONDO:0031043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 12","secondary_identifiers":["MEDGEN:1823976","UMLS:C5774203","OMIM:620014","DOID:0081030"],"synonyms":[{"name":"LMPHM12","type":"exact"},{"name":"central conducting lymphatic anomaly","type":"exact"},{"name":"lymphatic malformation 12","type":"exact"}],"termid":"MONDO:0031043","xrefs":{"Monarch":{"xref_id":"0031043"}}}


id: GO:0075277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of telium development","termid":"GO:0075276"},{"relation_name":"positively_regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telium development","termid":"GO:0075277"}


id: PR:Q9UTR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asa1 gene.","definition_xrefs":["UniProtKB:Q9UTR9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.02","synonyms":[{"name":"Spom972h-asa1","type":"exact"}],"termid":"PR:Q9UTR9"}


id: PBO:0082630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Cia2p that directs Fe-S cluster incorporation and maturation of a subset of cytosolic and nuclear proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human MMS19","termid":"PBO:0082630"}


id: PBO:0077797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 1 member B","termid":"PBO:0077797"}


id: MONDO:0011179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmaniasis, tegumentary, susceptibility to","secondary_identifiers":["OMIM:602068","MEDGEN:412566","UMLS:C2748501"],"synonyms":[{"name":"leishmaniasis, tegumentary, susceptibility to","type":"exact"}],"termid":"MONDO:0011179","xrefs":{"Monarch":{"xref_id":"0011179"}}}


id: PBO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue","termid":"PBO:0001334"}


id: GO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of peroxisome organization.","definition_xrefs":["GOC:dph","PMID:7500953"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061424)","synonyms":[{"name":"positive regulation of peroxisome organisation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0061424"}


id: PR:000050506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the spg1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septum-promoting GTP-binding protein 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1565.06c","synonyms":[{"name":"GTPase spg1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPAC1565.06c","type":"related"},{"name":"Sid3 protein (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spg1","type":"exact"},{"name":"sid3","type":"related"},{"name":"spg1","type":"related"}],"termid":"PR:000050506"}


id: PomGeneEx:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PomGeneEx:0000006"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein absent","synonyms":[{"name":"protein expression absent","type":"exact"}],"termid":"PomGeneEx:0000022"}


id: MONDO:0015744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 19q is a rare chromosomal anomaly syndrome characterized by low birth weight, developmental delay, intellectual disability, short stature, craniofacial dysmorphism (incl. microcephaly, midface hypoplasia, hypertelorism, flat nasal bridge, ear anomalies, short philtrum, downturned corners of the mouth, micrognathia) and a short neck with redundant skin folds. Additional features may include hypotonia, skeletal anomalies (e.g. clino/camptodactyly), seizures and congenital cardiac, urogenital and gastrointestinal malformations.","definition_xrefs":["Orphanet:1717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 19","termid":"MONDO:0016969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 19q","secondary_identifiers":["GARD:18743","SCTID:766052008","MEDGEN:1646863","UMLS:C4707664"],"synonyms":[{"name":"distal duplication 19q","type":"exact"},{"name":"distal trisomy type 19q","type":"exact"},{"name":"telomeric duplication 19q","type":"exact"},{"name":"trisomy 19qter","type":"exact"}],"termid":"MONDO:0015744","xrefs":{"Monarch":{"xref_id":"0015744"}}}


id: GO:1901505
data:
  {"annotated_genes":["SJAG_00612","SJAG_01960","SJAG_04162","SJAG_00276","SJAG_03334","SJAG_01177","SJAG_00434","SJAG_02050","SJAG_00339","SJAG_04406","SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[101682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[58910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[103173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[93685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[72147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[112570,93454,93687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071917"},{"annotations":[75351,88710,76346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[76347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[77958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[77959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate derivative from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"carbohydrate derivative transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative transporter activity","type":"related"}],"termid":"GO:1901505","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0046964":null,"GO:0071917":null,"GO:0140987":null,"GO:1902557":null}}


id: PBO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBA57 divergent transcript","termid":"PBO:0050841"}


id: PR:Q10497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.11 gene.","definition_xrefs":["UniProtKB:Q10497","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26F1.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.11","synonyms":[{"name":"Spom972h-SPAC26F1.11","type":"exact"}],"termid":"PR:Q10497"}


id: PBO:0046699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 antisense RNA 1","termid":"PBO:0046699"}


id: PBO:0042132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil alpha-helical rod protein 1","termid":"PBO:0042132"}


id: GO:0046818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A location in the host cell nucleus where viral proteins colocalize late in infection prior to the onset of viral DNA synthesis. More than one site can be present simultaneously.","definition_xrefs":["PMID:10233976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"dense nuclear body","termid":"GO:0046818"}


id: PBO:0072097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 28","termid":"PBO:0072097"}


id: PBO:0046450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiplakin 1","termid":"PBO:0046450"}


id: PBO:0089787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein, G-patch domain, PINX1 family Pxr1","termid":"PBO:0089787"}


id: GO:0016761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-glucose + ((1,4)-beta-D-glucosyl)(n) = GDP + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["EC:2.4.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase activity","termid":"GO:0016759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cellulose synthase (GDP-forming) activity","secondary_identifiers":["MetaCyc:CELLULOSE-SYNTHASE-GDP-FORMING-RXN","RHEA:17797"],"synonyms":[{"name":"GDP-glucose-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"GDP-glucose-cellulose glucosyltransferase activity","type":"related"},{"name":"GDP-glucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"GDPglucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"cellulose synthase (guanosine diphosphate-forming) activity","type":"related"},{"name":"guanosine diphosphoglucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"guanosine diphosphoglucose-cellulose glucosyltransferase activity","type":"related"}],"termid":"GO:0016761"}


id: PBO:0056609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 2","termid":"PBO:0056609"}


id: PBO:0041804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 14","termid":"PBO:0041804"}


id: GO:1902247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of geranylgeranyl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"geranylgeranyl diphosphate metabolic process","termid":"GO:0033385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"geranylgeranyl diphosphate catabolic process","synonyms":[{"name":"geranylgeranyl diphosphate breakdown","type":"exact"},{"name":"geranylgeranyl diphosphate catabolism","type":"exact"},{"name":"geranylgeranyl diphosphate degradation","type":"exact"}],"termid":"GO:1902247"}


id: PBO:0025544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2, Ubc11/UbcP4","termid":"PBO:0025544"}


id: SO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting two bases backward.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_2_frameshift_variant","synonyms":[{"name":"+2 frameshift variant","type":"exact"},{"name":"plus 2 frameshift variant","type":"exact"}],"termid":"SO:0001595"}


id: MONDO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"perforated corneal ulcer","secondary_identifiers":["ICD9:370.06","MEDGEN:508831","UMLS:C0151844","icd11.foundation:232838320","DOID:10445","SCTID:46606001"],"termid":"MONDO:0001038","xrefs":{"Monarch":{"xref_id":"0001038"}}}


id: GO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a cytosine residue to uridine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytidine to uridine editing","secondary_identifiers":["Reactome:R-HSA-72200"],"termid":"GO:0016554"}


id: PBO:0082688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; required for vacuolar protein sorting; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p; human ortholog is implicated in progressive cerebello-cerebral atrophy type 2 (PCCA2)","termid":"PBO:0082688"}


id: GO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the relaxation of smooth muscle in a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in smooth muscle relaxation in another organism (obsolete GO:0044617)","synonyms":[{"name":"modulation of relaxation of smooth muscle in another organism","type":"related"},{"name":"modulation of relaxation of smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of smooth muscle in other organism","type":"exact"}],"termid":"GO:0044617"}


id: PBO:0057788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3115","termid":"PBO:0057788"}


id: GO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage condensation","termid":"GO:0001502"}


id: GO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell proliferation","termid":"GO:0070345"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"negatively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of white fat cell proliferation","synonyms":[{"name":"down regulation of white fat cell proliferation","type":"exact"},{"name":"down-regulation of white fat cell proliferation","type":"exact"},{"name":"downregulation of white fat cell proliferation","type":"exact"},{"name":"inhibition of white fat cell proliferation","type":"narrow"},{"name":"negative regulation of white adipocyte proliferation","type":"exact"},{"name":"negative regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070351"}


id: PBO:0076047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1 pseudogene 2","termid":"PBO:0076047"}


id: GO:0009756
data:
  {"annotated_genes":["SJAG_02481","SJAG_02444","SJAG_01254","SJAG_03081","SJAG_04026","SJAG_00472","SJAG_02311","SJAG_04551","SJAG_01245","SJAG_00424","SJAG_02426","SJAG_04312","SJAG_00610","SJAG_00266","SJAG_01699","SJAG_00574","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106814,116861,106228,94564,109325,109830,115833,107164,102167],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[93091,100762,116682,92426,108284],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[102462,103159,89777],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of carbohydrate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"carbohydrate mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate mediated signalling","type":"exact"}],"termid":"GO:0009756","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: PR:O13813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tom22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.16","synonyms":[{"name":"Spom972h-tom22","type":"exact"},{"name":"mitochondrial 22 kDa outer membrane protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translocase of outer membrane 22 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13813"}


id: PBO:0031507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_starvation","termid":"PBO:0031507"}


id: MONDO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral folate receptor alpha deficiency (obsolete MONDO:0000420)","termid":"MONDO:0000420","xrefs":{"Monarch":{"xref_id":"0000420"}}}


id: PBO:0062989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin coregulated like","termid":"PBO:0062989"}


id: PR:O74974
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A digestive organ expansion factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12933:SF0","OMA:SCHPO05047","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.01c","secondary_identifiers":["UniProtKB:O74974"],"synonyms":[{"name":"Spom972h-DIEXF","type":"exact"},{"name":"U three protein 25 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 25 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74974"}


id: GO:0140528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of a bilobe structure, a cytoskeletal structure in some kinetoplastid species linking the structures of the ciliary pocket collar and the flagellum attachment zone (aka cilium attachment zone).","definition_xrefs":["PMID:32675283","PMID:18443217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"bilobe structure assembly","synonyms":[{"name":"bilobe structure biogenesis","type":"exact"},{"name":"bilobe structure formation","type":"exact"},{"name":"kinetoplastid flagellar hook complex assembly","type":"exact"}],"termid":"GO:0140528"}


id: PBO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae COX18","termid":"PBO:0017089"}


id: PBO:0003325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human THOC5 ortholog (predicted)","termid":"PBO:0003325"}


id: PATO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001210 plane_angle_quantity (obsolete PATO:0001210)","termid":"PATO:0001210"}


id: GO:0098519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleotide + H2O = nucleotide + phosphate.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphatase activity, acting on free nucleotides (obsolete GO:0098519)","synonyms":[{"name":"nucleotide phosphatase activity","type":"exact"}],"termid":"GO:0098519"}


id: PBO:0084298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; a secreted, glycosylated form is regulated by glucose repression, and an intracellular, nonglycosylated enzyme is produced constitutively","termid":"PBO:0084298"}


id: GO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrosphingosine 1-phosphate + H2O = dihydrosphingosine + phosphate.","definition_xrefs":["PMID:12815058","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"dihydrosphingosine-1-phosphate phosphatase activity","secondary_identifiers":["RHEA:27514","MetaCyc:DHS-PHOSPHATASE-RXN"],"synonyms":[{"name":"dihydrosphingosine-1-phosphate phosphohydrolase activity","type":"exact"},{"name":"sphinganine-1-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0070780"}


id: MONDO:0014171
data:
  {"annotated_genes":["SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86268],"is_not":false,"summary":null,"term":"MONDO:0014171"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01215":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0090138","MEDGEN:815750","UMLS:C3809420","OMIM:615412"],"synonyms":[{"name":"CDCBM4","type":"exact"},{"name":"TUBG1 complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBG1","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 4","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 4","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 4","type":"related"}],"termid":"MONDO:0014171","terms_by_termid":{"MONDO:0014171":null},"xrefs":{"Monarch":{"xref_id":"0014171"}}}


id: PBO:0075009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-20","termid":"PBO:0075009"}


id: GO:0047747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) ATP + cholate + CoA = AMP + diphosphate + choloyl-CoA and (2) ATP + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + CoA = AMP + diphosphate + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA. This reaction is the first step in the conjugation of bile acids with amino acids, converting bile acids into their acyl-CoA thioesters. Chenodeoxycholate, deoxycholate, lithocholate and trihydroxycoprostanoate can also act as substrates.","definition_xrefs":["EC:6.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholate-CoA ligase activity","secondary_identifiers":["GO:0047477","MetaCyc:CHOLATE--COA-LIGASE-RXN"],"synonyms":[{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate--CoA ligase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate-CoA ligase activity","type":"exact"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate:CoA ligase (AMP-forming) activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA ligase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA synthetase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl coenzyme A synthetase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate-CoA ligase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA ligase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA synthetase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl coenzyme A synthetase activity","type":"related"},{"name":"BAL activity","type":"related"},{"name":"THCA-CoA ligase activity","type":"related"},{"name":"bile acid CoA ligase activity","type":"related"},{"name":"bile acid coenzyme A ligase activity","type":"related"},{"name":"cholate thiokinase activity","type":"related"},{"name":"cholate:CoA ligase (AMP-forming)","type":"related"},{"name":"cholic acid:CoA ligase activity","type":"related"},{"name":"cholic thiokinase activity","type":"related"},{"name":"choloyl coenzyme A synthetase activity","type":"related"},{"name":"choloyl-CoA synthetase activity","type":"related"},{"name":"cholyl-CoA synthetase activity","type":"related"},{"name":"trihydroxycoprostanoyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047747"}


id: GO:0090013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090013)","synonyms":[{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090013"}


id: PBO:0050719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 5","termid":"PBO:0050719"}


id: PBO:0086980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; VTC2 has a paralog, VTC3, that arose from the whole genome duplication","termid":"PBO:0086980"}


id: GO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tryptophan 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:TRYPTOPHAN-23-DIOXYGENASE-RXN","Reactome:R-HSA-198563","GO:0004426","Reactome:R-HSA-888614","Reactome:R-HSA-71188","RHEA:24536"],"synonyms":[{"name":"L-tryptophan 2,3-dioxygenase activity","type":"related"},{"name":"L-tryptophan pyrrolase activity","type":"related"},{"name":"L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"TDO","type":"related"},{"name":"indolamine 2,3-dioxygenase activity","type":"broad"},{"name":"indoleamine-pyrrole 2,3-dioxygenase activity","type":"exact"},{"name":"tryptamin 2,3-dioxygenase activity","type":"related"},{"name":"tryptamine 2,3-dioxygenase activity","type":"related"},{"name":"tryptophan oxygenase activity","type":"broad"},{"name":"tryptophan peroxidase activity","type":"broad"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0004833"}


id: PBO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.2","termid":"PBO:0005037"}


id: MONDO:0023696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease with similar features to Marinesco-Sjogren syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marinesco-Sjogren-like syndrome","secondary_identifiers":["OMIM:248810","MEDGEN:163207","UMLS:C0796036","MESH:C535913"],"synonyms":[{"name":"Marinesco-Sjogren-like syndrome (MSLS)","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, intellectual disability, and myopathy","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, mental retardation, and myopathy","type":"related"}],"termid":"MONDO:0023696","xrefs":{"Monarch":{"xref_id":"0023696"}}}


id: FYPO:0002905
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"normal telomere maintenance","synonyms":[{"name":"normal telomere maintenance during mitotic cell cycle","type":"related"},{"name":"normal telomere maintenance during vegetative growth","type":"exact"}],"termid":"FYPO:0002905"}


id: MONDO:0005001
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the stomach that is chronic in nature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic gastritis","secondary_identifiers":["HP:0005231","EFO:0000337","ICD9:535.4","ICD9:535.40","SCTID:8493009","MEDGEN:39089","UMLS:C0085695","NCIT:C26929","ICD9:535.41"],"synonyms":[{"name":"chronic gastritis","type":"exact"},{"name":"chronic gastritis (disease)","type":"exact"},{"name":"gastritis (disease), chronic","type":"exact"}],"termid":"MONDO:0005001","xrefs":{"Monarch":{"xref_id":"0005001"}}}


id: GO:1903769
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in bone marrow.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9241534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation in bone marrow","termid":"GO:0071863"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in bone marrow","termid":"GO:0071838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in bone marrow","synonyms":[{"name":"down regulation of bone marrow cell proliferation","type":"exact"},{"name":"down regulation of cell proliferation in bone marrow","type":"exact"},{"name":"down-regulation of bone marrow cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation in bone marrow","type":"exact"},{"name":"downregulation of bone marrow cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation in bone marrow","type":"exact"},{"name":"inhibition of bone marrow cell proliferation","type":"narrow"},{"name":"inhibition of cell proliferation in bone marrow","type":"narrow"},{"name":"negative regulation of bone marrow cell proliferation","type":"exact"}],"termid":"GO:1903769"}


id: PBO:0066829
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 128","termid":"PBO:0066829"}


id: GO:2000319
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id: PBO:0067772
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 72","termid":"PBO:0067772"}


id: PBO:0059422
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome recycling factor pseudogene 1","termid":"PBO:0059422"}


id: GO:0071489
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to red or far red light","termid":"GO:0071489"}


id: PBO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet3","termid":"PBO:0017812"}


id: FYPO:0007814
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is increased during a cellular response to hydroxyurea.","definition_xrefs":["PMID:34108240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea","synonyms":[{"name":"increased rate of DNA replication elongation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased rate of DNA strand elongation involved in mitotic DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of DNA strand elongation involved in nuclear cell cycle DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to HU","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007814"}


id: PBO:0031906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic19","termid":"PBO:0031906"}


id: MONDO:0020480
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"encephalopathy due to sulfite oxidase deficiency","termid":"MONDO:0019358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency","secondary_identifiers":["OMIMPS:252150","MEDGEN:75652","Orphanet:99732","GARD:3705","DOID:0111165","icd11.foundation:819219337","UMLS:C0268119"],"synonyms":[{"name":"MOCOD","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase and aldehyde oxidase","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase","type":"related"},{"name":"molybdenum cofactor deficiency","type":"related"}],"termid":"MONDO:0020480","xrefs":{"Monarch":{"xref_id":"0020480"}}}


id: GO:2000069
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-embryonic root development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of root development","termid":"GO:2000280"},{"relation_name":"regulates","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-embryonic root development","termid":"GO:2000069"}


id: GO:0031036
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament assembly","termid":"GO:0031034"},{"relation_name":"is_a","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0007010","GO:0030036","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"myosin II filament assembly","synonyms":[{"name":"myosin II polymerization","type":"related"}],"termid":"GO:0031036"}


id: PBO:0085546
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id: MONDO:0024458
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