# terms

id: MONDO:0017635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete parkinsonian syndrome due to neurodegenerative disease (obsolete MONDO:0017635)","secondary_identifiers":["Orphanet:306666"],"termid":"MONDO:0017635","xrefs":{"Monarch":{"xref_id":"0017635"}}}


id: PR:O74535
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation factor complex subunit C74.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.02c","synonyms":[{"name":"Spom972h-ppn1","type":"exact"}],"termid":"PR:O74535"}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: SO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: SO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that results in no gene product.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"null_mutation","termid":"SO:0002055"},{"relation_name":"is_a","term_name":"decreased_gene_product_level","termid":"SO:0002316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent_gene_product","synonyms":[{"name":"absent gene product","type":"exact"}],"termid":"SO:0002317"}


id: GO:0030336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell migration","synonyms":[{"name":"down regulation of cell migration","type":"exact"},{"name":"down-regulation of cell migration","type":"exact"},{"name":"downregulation of cell migration","type":"exact"},{"name":"inhibition of cell migration","type":"narrow"}],"termid":"GO:0030336"}


id: PBO:0058199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4492","termid":"PBO:0058199"}


id: PBO:0080909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta","termid":"PBO:0080909"}


id: GO:0106237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,12R,14Z)-12-hydroperoxyicosa-5,8,10,14-tetraenoate.","definition_xrefs":["GOC:gap","PMID:10100631","RHEA:41336","PMID:11256953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"arachidonate 12(R)-lipoxygenase activity","termid":"GO:0106237"}


id: GO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-dimethylallyladenine + S-adenosyl-L-methionine(1+) = S-methyl-5'-thioadenosine + discadenine + H+.","definition_xrefs":["EC:2.5.1.24","RHEA:19581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"discadenine synthase activity","secondary_identifiers":["MetaCyc:DISCADENINE-SYNTHASE-RXN","KEGG_REACTION:R03726"],"synonyms":[{"name":"S-adenosyl-L-methionine:6-N-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N6-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferas","type":"related"},{"name":"discadenine synthetase activity","type":"related"}],"termid":"GO:0047870"}


id: MONDO:0005397
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"}]},"cv_name":"mondo","definition":"Enlargement of the thyroid gland usually caused by lack of iodine in the diet, hyperthyroidism, or thyroid nodules. Symptoms include difficulty in breathing and swallowing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"goiter","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006042","UMLS:C0018021","HP:0000853","ICD9:240.9","DOID:12176","SCTID:3716002","MEDGEN:42270","EFO:0004283","NCIT:C26785"],"synonyms":[{"name":"Thyromegaly","type":"exact"},{"name":"goiter","type":"exact"},{"name":"goiter (disease)","type":"exact"},{"name":"goitre (disease)","type":"exact"}],"termid":"MONDO:0005397","terms_by_termid":{"MONDO:0007681":null},"xrefs":{"Monarch":{"xref_id":"0005397"}}}


id: FYPO:0006121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which membrane raft distribution, i.e. the process that establishes the spatial arrangement of membrane rafts within a cellular membrane, is abnormal.","definition_xrefs":["GO:0031580","PMID:19808887","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal membrane raft distribution","synonyms":[{"name":"abnormal lipid raft distribution","type":"exact"},{"name":"abnormal membrane raft distribution during mitotic cell cycle","type":"related"},{"name":"abnormal membrane raft distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006121"}


id: GO:0034671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the pronephros.","definition_xrefs":["GOC:mh"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in pronephros anterior/posterior pattern specification (obsolete GO:0034671)","synonyms":[{"name":"retinoic acid receptor signaling pathway involved in pronephric kidney anterior/posterior pattern specification","type":"exact"},{"name":"retinoic acid receptor signalling pathway involved in pronephros anterior-posterior patterning","type":"exact"}],"termid":"GO:0034671"}


id: PBO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A1","termid":"PBO:0043703"}


id: PBO:0116323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular 5'-nucleotidase, human NT5E family Efn2","termid":"PBO:0116323"}


id: GO:0072433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic G2/M transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G2 DNA damage checkpoint (obsolete GO:0072433)","synonyms":[{"name":"G2/M transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"detection of DNA damage stimulus involved in G2 DNA damage checkpoint","type":"related"},{"name":"detection of DNA damage stimulus involved in G2/M transition DNA damage checkpoint","type":"related"},{"name":"detection of DNA damage stimulus involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2/M transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic G2/M transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in G2/M transition DNA damage checkpoint","type":"related"},{"name":"sensing involved in mitotic G2/M transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072433"}


id: PBO:0088946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific disordered protein","termid":"PBO:0088946"}


id: GO:0048687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of sprouting of an injured axon.","definition_xrefs":["GOC:lm","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"positively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting of injured axon","synonyms":[{"name":"activation of sprouting of injured axon","type":"narrow"},{"name":"stimulation of sprouting of injured axon","type":"narrow"},{"name":"up regulation of sprouting of injured axon","type":"exact"},{"name":"up-regulation of sprouting of injured axon","type":"exact"},{"name":"upregulation of sprouting of injured axon","type":"exact"}],"termid":"GO:0048687"}


id: MONDO:0012878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the SDHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Cowden syndrome 2","secondary_identifiers":["MESH:C567337","OMIM:612359"],"synonyms":[{"name":"CWS2","type":"related"},{"name":"Cowden disease caused by mutation in SDHB","type":"exact"},{"name":"Cowden syndrome 2","type":"exact"},{"name":"Cowden syndrome type 2","type":"exact"},{"name":"SDHB Cowden disease","type":"exact"}],"termid":"MONDO:0012878","xrefs":{"Monarch":{"xref_id":"0012878"}}}


id: PBO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter (predicted)","termid":"PBO:0000135"}


id: PBO:0049207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2A","termid":"PBO:0049207"}


id: PBO:0050233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 11","termid":"PBO:0050233"}


id: MONDO:0018647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"secondary sclerosing cholangitis","secondary_identifiers":["GARD:21869","MEDGEN:586530","Orphanet:447774","SCTID:197442005","UMLS:C0400978"],"termid":"MONDO:0018647","xrefs":{"Monarch":{"xref_id":"0018647"}}}


id: FYPO:0002171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a low temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at low temperature (obsolete FYPO:0002171)","synonyms":[{"name":"cell viable at low temperature","type":"exact"},{"name":"viable cell at low temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at low temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0002171"}


id: GO:0019144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-sugar + H2O = AMP + sugar 1-phosphate.","definition_xrefs":["EC:3.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ADP-sugar diphosphatase activity","secondary_identifiers":["MetaCyc:ADPSUGPPHOSPHAT-RXN"],"synonyms":[{"name":"ADP-sugar pyrophosphatase activity","type":"related"},{"name":"ADP-sugar sugarphosphohydrolase activity","type":"related"},{"name":"ADPsugar pyrophosphatase activity","type":"related"},{"name":"adenosine diphosphosugar pyrophosphatase activity","type":"related"},{"name":"nucleoside diphosphate-sugar hydrolase activity","type":"broad"}],"termid":"GO:0019144"}


id: MONDO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"optic atrophy","termid":"MONDO:0003608"},{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucomatous atrophy of optic disk","secondary_identifiers":["MEDGEN:543288","ICD9:377.14","DOID:10337","SCTID:1207009","UMLS:C0271342"],"synonyms":[{"name":"glaucomatous atrophy [cupping] of optic disc","type":"exact"},{"name":"glaucomatous atrophy [cupping] of optic disk","type":"exact"}],"termid":"MONDO:0001006","xrefs":{"Monarch":{"xref_id":"0001006"}}}


id: PBO:0060850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 1","termid":"PBO:0060850"}


id: PBO:0088029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB family mitochondrial protein; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; contains transmembrane domain and mitochondrial targeting sequence","termid":"PBO:0088029"}


id: FYPO:0003049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["SO:0000673","PomBase:mah","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"},{"relation_name":"output_of","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0003048"],"is_obsolete":false,"name":"increased transcriptional readthrough","synonyms":[{"name":"3'-extended transcript","type":"related"},{"name":"increased transcript length by 3' extension","type":"related"},{"name":"increased transcript length due to transcriptional readthrough","type":"exact"},{"name":"poly(A) readthrough","type":"related"}],"termid":"FYPO:0003049"}


id: PBO:0003465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase gamma subunit (predicted)","termid":"PBO:0003465"}


id: PBO:0069275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 531, pseudogene","termid":"PBO:0069275"}


id: MONDO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe Canavan disease (CD) is a rapidly progressing neurodegenerative disorder characterized by leukodystrophy with macrocephaly, severe developmental delay and hypotonia.","definition_xrefs":["Orphanet:314911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Canavan disease","termid":"MONDO:0010079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"severe Canavan disease","secondary_identifiers":["GARD:17437","MEDGEN:1826002","UMLS:C5575558"],"synonyms":[{"name":"infantile Canavan disease","type":"exact"},{"name":"neonatal Canavan disease","type":"exact"}],"termid":"MONDO:0017830","xrefs":{"Monarch":{"xref_id":"0017830"}}}


id: MONDO:1011560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephroma that occurs in ducks.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"nephroma, non-human animal","termid":"MONDO:1011438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephroma, ducks","secondary_identifiers":["OMIA:001113-8835"],"termid":"MONDO:1011560","xrefs":{"Monarch":{"xref_id":"1011560"}}}


id: MONDO:0009854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroneus tertius muscle, absence of","secondary_identifiers":["OMIM:261400","MEDGEN:376684","UMLS:C1850001"],"synonyms":[{"name":"peroneus tertius muscle, absence of","type":"exact"}],"termid":"MONDO:0009854","xrefs":{"Monarch":{"xref_id":"0009854"}}}


id: PBO:0045668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNAP pseuodgene 3","termid":"PBO:0045668"}


id: PBO:0116408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 4","termid":"PBO:0116408"}


id: PBO:0111314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein, TspO","termid":"PBO:0111314"}


id: PBO:0085265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxin; required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p; partially redundant with Pex21p; primarily responsible for peroxisomal import during growth on oleate, and expression is induced during oleate growth","termid":"PBO:0085265"}


id: MONDO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pontiac fever (obsolete MONDO:0000264)","termid":"MONDO:0000264","xrefs":{"Monarch":{"xref_id":"0000264"}}}


id: MONDO:0016822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare systemic disease characterized by severe myalgia and peripheral eosinophilia associated with tryptophan dietary supplementation. The symptoms do not subside after tryptophan discontinuation. Clinical presentation includes muscle tenderness and cramps, fatigue, weakness, paresthesia, peripheral edema, arthralgia, dyspnea, skin rash, dry mouth, and development of scleroderma-like skin abnormalities.","definition_xrefs":["Orphanet:2582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myalgia-eosinophilia syndrome associated with tryptophan","secondary_identifiers":["MedDRA:10014952","MEDGEN:698358","GARD:18775","UMLS:C1275050","MESH:D016603"],"termid":"MONDO:0016822","xrefs":{"Monarch":{"xref_id":"0016822"}}}


id: GO:0061648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the replacement of an existing tooth with another tooth.","definition_xrefs":["GOC:dph","PMID:15170864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth replacement","termid":"GO:0061648"}


id: PBO:0042453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 6","termid":"PBO:0042453"}


id: PBO:0080410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37D subunit of ESCRT-I","termid":"PBO:0080410"}


id: PBO:0058526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6071","termid":"PBO:0058526"}


id: MONDO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy in collagen vascular disease","secondary_identifiers":["UMLS:C0154759","SCTID:193177003","DOID:13649","ICD9:357.1","ICD9:357.4","MEDGEN:509648"],"termid":"MONDO:0001765","xrefs":{"Monarch":{"xref_id":"0001765"}}}


id: PBO:0064574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PORCN divergent transcript","termid":"PBO:0064574"}


id: PBO:0004777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur protein Isa2","termid":"PBO:0004777"}


id: PBO:0070812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 42","termid":"PBO:0070812"}


id: PBO:0070814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 44","termid":"PBO:0070814"}


id: GO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that results in the establishment of the ureteric bud such that there is a similar arrangement in form and relationship of parts along its anterior/posterior axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway (obsolete GO:0072101)","synonyms":[{"name":"specification of ureteric bud anterior/posterior asymmetry by BMP signaling pathway","type":"exact"},{"name":"specification of ureteric bud anterior/posterior symmetry by BMP signalling pathway","type":"exact"}],"termid":"GO:0072101"}


id: FYPO:0005640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is abnormal during one or both meiotic nuclear divisions, such that centromeres dissociate from the spindle pole body, but do not cluster with each other.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic centromere clustering","termid":"FYPO:0004086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000138","FYPO:0000641"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering with centromeres dissociated from spindle pole body","synonyms":[{"name":"abnormal centromere clustering during meiosis with centromeres dissociated from spindle pole body","type":"exact"},{"name":"abnormal centromere clustering with centromeres dissociated from SPB during meiotic cell cycle","type":"related"},{"name":"abnormal centromere clustering with centromeres dissociated from spindle pole body during meiosis","type":"exact"},{"name":"abnormal centromere clustering with centromeres dissociated from spindle pole body during meiotic cell cycle","type":"related"},{"name":"abnormal chromosome retrieval during meiosis with centromeres dissociated from spindle pole body","type":"related"},{"name":"abnormal kinetochore retrieval during meiosis with centromeres dissociated from spindle pole body","type":"related"},{"name":"abnormal meiotic centromere clustering with centromeres dissociated from SPB","type":"exact"}],"termid":"FYPO:0005640"}


id: PBO:0091199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys","termid":"PBO:0091199"}


id: PBO:0058258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4636","termid":"PBO:0058258"}


id: FYPO:0005125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during meiotic cell cycle","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene transcripts during meiotic cell cycle","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0005125"}


id: PBO:0091084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSB-forming protein Rec12/Spo11","termid":"PBO:0091084"}


id: PBO:0044259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR pseudogene 1","termid":"PBO:0044259"}


id: MONDO:0012859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the TNFRS11A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 7","secondary_identifiers":["DOID:0110946","MESH:C567354","OMIM:612301","Orphanet:178389","MEDGEN:436770","UMLS:C2676766","GARD:10106"],"synonyms":[{"name":"OPTB7","type":"exact"},{"name":"TNFRSF11A osteopetrosis (disease)","type":"exact"},{"name":"autosomal recessive osteoclast-poor osteopetrosis with hypogammaglobulinemia","type":"exact"},{"name":"autosomal recessive osteopetrosis type 7","type":"exact"},{"name":"osteoclast-poor osteopetrosis with hypogammaglobulinemia","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in TNFRSF11A","type":"exact"},{"name":"osteopetrosis autosomal recessive 7","type":"related"},{"name":"osteopetrosis osteoclast-poor with hypogammaglobulinemia","type":"related"},{"name":"osteopetrosis, autosomal recessive 7","type":"related"},{"name":"osteopetrosis, autosomal recessive type 7","type":"exact"},{"name":"osteopetrosis, osteoclast-poor, with hypogammaglobulinemia","type":"related"},{"name":"osteopetrosis-hypogammaglobulinemia syndrome","type":"exact"}],"termid":"MONDO:0012859","xrefs":{"Monarch":{"xref_id":"0012859"}}}


id: GO:0000296
data:
  {"annotated_genes":["SJAG_02059","SJAG_02344","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69271,111246,117649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The directed movement of spermine, N,N-bis(3-aminopropyl)-1,4-diaminobutane, a polyamine formed by the transfer of a propylamine group from decarboxylated S-adenosylmethionine to spermidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"spermine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0000296","terms_by_termid":{"GO:1903710":null}}


id: PBO:0084682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial C1-tetrahydrofolate synthase; involved in interconversion between different oxidation states of tetrahydrofolate (THF); provides activities of formyl-THF synthetase, methenyl-THF cyclohydrolase, and methylene-THF dehydrogenase","termid":"PBO:0084682"}


id: _global:correlates_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlates_with","termid":"_global:correlates_with"}


id: GO:0033822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose to a glucosylhydroxymethylcytosine residue in DNA.","definition_xrefs":["EC:2.4.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucosyl-DNA beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.28-RXN"],"synonyms":[{"name":"T6-beta-glucosyl transferase activity","type":"related"},{"name":"T6-glucosyl-HMC-beta-glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:D-glucosyl-DNA beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-glucosyl-DNA beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-glucosyldeoxyribonucleate beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0033822"}


id: PBO:0069278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 534, pseudogene","termid":"PBO:0069278"}


id: PBO:0045728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 7","termid":"PBO:0045728"}


id: PBO:0053914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1209","termid":"PBO:0053914"}


id: PBO:0066664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 1","termid":"PBO:0066664"}


id: GO:0051483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids, independent of mevalonate. Isopentenyl diphosphate (IPP) is the fundamental unit in terpenoid biosynthesis, and in mevalonate-independent biosynthesis, it is produced from pyruvate and glyceraldehyde 3-phosphate via intermediates including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpenoid biosynthetic process, mevalonate-independent","synonyms":[{"name":"mevalonate-independent terpene biosynthesis","type":"narrow"},{"name":"mevalonate-independent terpene biosynthetic process","type":"narrow"},{"name":"mevalonate-independent terpenoid biosynthesis","type":"exact"},{"name":"mevalonate-independent terpenoid biosynthetic process","type":"exact"},{"name":"terpene biosynthesis, mevalonate-independent","type":"narrow"},{"name":"terpene biosynthetic process, mevalonate-independent","type":"narrow"},{"name":"terpenoid anabolism, mevalonate-independent","type":"exact"},{"name":"terpenoid formation, mevalonate-independent","type":"exact"},{"name":"terpenoid synthesis, mevalonate-independent","type":"exact"}],"termid":"GO:0051483"}


id: MONDO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of immature glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"enteric pattern testicular yolk sac tumor","secondary_identifiers":["MEDGEN:308261","DOID:8362","NCIT:C39932","UMLS:C1515304"],"synonyms":[{"name":"testicular yolk Sac tumor, enteric pattern","type":"exact"}],"termid":"MONDO:0004543","xrefs":{"Monarch":{"xref_id":"0004543"}}}


id: PBO:0080012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 14","termid":"PBO:0080012"}


id: PBO:0051665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of CDK, cyclin A1 interacting protein 1","termid":"PBO:0051665"}


id: GO:0033998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride (DFA III) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inulin fructotransferase (DFA-III-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.18-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan lyase (alpha-D-fructofuranose-beta-D-fructofuranose-1,2':2,3'-dianhydride-forming) activity","type":"related"},{"name":"inulase II activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (1,2':2,3'-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (forming alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride) activity","type":"related"},{"name":"inulin fructotransferase (DFA-III-producing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing, difructofuranose-1,2':2,3'-dianhydride-forming) activity","type":"related"},{"name":"inulinase II activity","type":"related"}],"termid":"GO:0033998"}


id: MONDO:0003183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete trachea adenoid cystic carcinoma (obsolete MONDO:0003183)","termid":"MONDO:0003183","xrefs":{"Monarch":{"xref_id":"0003183"}}}


id: SO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript encoded by sequences adjacent to the ends of the 5' and 3' miR-encoding sequences that abut the loop in precursor miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moR","synonyms":[{"name":"microRNA-offset RNA","type":"exact"}],"termid":"SO:0002032"}


id: PBO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB endocytic adaptor protein","termid":"PBO:0061658"}


id: PBO:0077307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM44 antisense RNA 2","termid":"PBO:0077307"}


id: MONDO:1012467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postpartum dysgalactia syndrome, non-human animal","termid":"MONDO:1011680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postpartum dysgalactia syndrome, pig","secondary_identifiers":["OMIA:001822-9823"],"termid":"MONDO:1012467","xrefs":{"Monarch":{"xref_id":"1012467"}}}


id: FYPO:0003345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation does not occur; arrest normally occurs in G1 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000257","FYPO:0000298","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"abolished cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"abolished mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"abolished mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"abolished nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase in response to nitrogen starvation abolished","type":"exact"}],"termid":"FYPO:0003345"}


id: PBO:0091826
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae POL2","termid":"PBO:0091826"}


id: GO:0016903
data:
  {"annotated_genes":["SJAG_00660","SJAG_03903","SJAG_02464","SJAG_06621","SJAG_00674","SJAG_03064","SJAG_02135","SJAG_00027","SJAG_03293","SJAG_00482","SJAG_00234","SJAG_00869","SJAG_02006","SJAG_03786","SJAG_02961","SJAG_02235","SJAG_02945","SJAG_03828","SJAG_06622","SJAG_00636","SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003842"},{"annotations":[101188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"},{"annotations":[76436,78958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"},{"annotations":[92152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051268"},{"annotations":[92153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051269"},{"annotations":[64639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004073"},{"annotations":[76425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004350"},{"annotations":[109713,80776,72853,109709,109714,109708,75070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"},{"annotations":[65078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004043"},{"annotations":[71819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003942"},{"annotations":[70687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004591"},{"annotations":[79416,73114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004739"},{"annotations":[76400,77912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[87786,88764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00482":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00869":null,"SJAG_01869":null,"SJAG_02006":null,"SJAG_02135":null,"SJAG_02235":null,"SJAG_02464":null,"SJAG_02945":null,"SJAG_02961":null,"SJAG_03064":null,"SJAG_03293":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016903","terms_by_termid":{"GO:0003842":null,"GO:0003942":null,"GO:0004029":null,"GO:0004043":null,"GO:0004073":null,"GO:0004350":null,"GO:0004365":null,"GO:0004591":null,"GO:0004739":null,"GO:0004777":null,"GO:0036243":null,"GO:0051268":null,"GO:0051269":null,"GO:0140087":null}}


id: PBO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 29","termid":"PBO:0072152"}


id: PBO:0029280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0029280"}


id: FYPO:0006149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to idarubicin. Cells stop growing (and may die) at a concentration of idarubicin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to idarubicin","synonyms":[{"name":"hypersensitive to idarubicin","type":"exact"},{"name":"sensitive to idarubicin during mitotic cell cycle","type":"related"},{"name":"sensitive to idarubicin during vegetative growth","type":"exact"}],"termid":"FYPO:0006149"}


id: SO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A shRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"shRNA_primary_transcript","termid":"SO:0002038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_shRNA_primary_transcript","synonyms":[{"name":"miR encoding shRNA primary transcript","type":"exact"}],"termid":"SO:0002039"}


id: MONDO:0005403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neonatal systemic lupus erthematosus (obsolete MONDO:0005403)","termid":"MONDO:0005403","xrefs":{"Monarch":{"xref_id":"0005403"}}}


id: PBO:0026835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_polymerase_activity","termid":"PBO:0026835"}


id: PBO:0066011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY RNA binding protein like","termid":"PBO:0066011"}


id: GO:0102910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 2 coniferol + O2 = (+)-pinoresinol + 2 H2O. The The protein encoding this activity has been termed 'dirigent protein' because it does not express any catalytic activity and serves only to bind and orientate the coniferyl alcohol-derived free radicals.","definition_xrefs":["GOC:pz","MetaCyc:RXN-8677","PMID:37202648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"dirigent protein activity","termid":"GO:0102910"}


id: GO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 4 isopentenyl diphosphate = 4 diphosphate + all-trans-heptaprenyl diphosphate.","definition_xrefs":["PMID:9708911","RHEA:27794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"heptaprenyl diphosphate synthase activity","secondary_identifiers":["GO:0036422","MetaCyc:TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN","EC:2.5.1.30"],"synonyms":[{"name":"HepPP synthase activity","type":"related"},{"name":"all-trans-heptaprenyl-diphosphate synthase activity","type":"exact"},{"name":"heptaprenyl pyrophosphate synthase activity","type":"related"},{"name":"heptaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-hexaprenyltranstransferase activity","type":"exact"}],"termid":"GO:0000010"}


id: PBO:0091073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase","termid":"PBO:0091073"}


id: PBO:0040970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 41","termid":"PBO:0040970"}


id: GO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chitin","termid":"GO:0010200"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chitin","termid":"GO:0071323"}


id: PBO:0003862
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy","termid":"PBO:0003862"}


id: FYPO:0003660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"decreased double-strand break repair during vegetative growth","synonyms":[{"name":"decreased double-strand break repair during mitotic cell cycle","type":"related"},{"name":"reduced double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003660"}


id: MONDO:0006423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm arising from the extraskeletal soft tissues near tendons and joints. It is a well circumscribed tumor characterized by the presence of chondrocytes, a lobulated hyaline cartilage growth pattern, and in some cases calcification.","definition_xrefs":["NCIT:C9482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondroma","termid":"MONDO:0002360"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft tissue chondroma","secondary_identifiers":["DOID:3814","EFO:1000540","MEDGEN:266157","SCTID:404078000","UMLS:C1275277"],"synonyms":[{"name":"chondroma of soft parts","type":"exact"},{"name":"extraskeletal chondroma","type":"exact"},{"name":"extraskeletal osteochondroma","type":"exact"},{"name":"soft tissue chondroma","type":"exact"}],"termid":"MONDO:0006423","xrefs":{"Monarch":{"xref_id":"0006423"}}}


id: GO:0120225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"coenzyme A binding","synonyms":[{"name":"CoA binding","type":"exact"}],"termid":"GO:0120225"}


id: PBO:0078899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-3","termid":"PBO:0078899"}


id: FYPO:0009110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal after short incubation in hydroxyurea.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal vegetative cell population growth after short incubation in hydroxyurea","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"normal vegetative cell population growth after acute hydroxyurea treatment","type":"exact"}],"termid":"FYPO:0009110"}


id: PBO:0088152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-ATPase assembly factor; functions with other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector (V0); protein abundance increases in response to DNA replication stress","termid":"PBO:0088152"}


id: FYPO:0007504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K9 specific histone demethylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone demethylase activity","termid":"FYPO:0007503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000654","FYPO:0000641","FYPO:0000661"],"is_obsolete":false,"name":"abolished histone demethylase activity (H3-K9 specific)","synonyms":[{"name":"histone demethylase activity (H3-K9 specific) abolished","type":"exact"}],"termid":"FYPO:0007504"}


id: PBO:0084592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YGL046W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL045W","termid":"PBO:0084592"}


id: GO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of lactone rings (intramolecular cyclic esters) to produce a hydroxyl group and a carboxyl group.","definition_xrefs":["PMID:11640988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactonohydrolase activity","termid":"GO:0046573"}


id: GO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"}


id: PBO:0005775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGG1 interacting factor 3 family, implicated in trancription","termid":"PBO:0005775"}


id: MONDO:0011449
data:
  {"annotated_genes":["SJAG_05175","SJAG_05182","SJAG_04706","SJAG_04295","SJAG_02139"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85716,85717,85718,85719,85720],"is_not":false,"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","definition":"Salla disease is the mildest form of the free sialic acid storage disorders, which primarily affect the nervous system. Infants with Salla disease typically begin to experience poor muscle tone (hypotonia) during the first year of life,followed by slowly progressive neurological problems. Signs and symptoms include intellectual disability and developmental delay; seizures ; ataxia ; muscle spasticity; and involuntary slow movements of the limbs (athetosis). About one-third of affected children learn to walk. It is caused by mutations in the SLC17A5 gene and is inherited in an autosomal recessive manner. Treatment is generally symptomatic and supportive.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"Salla disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309334","OMIM:604369","MedDRA:10067531","UMLS:C1096903","MEDGEN:203368","GARD:4754","NANDO:2201294","NANDO:1200149","SCTID:87074006","NANDO:1200582","NCIT:C85067"],"synonyms":[{"name":"SD","type":"related"},{"name":"Salla disease","type":"exact"},{"name":"sialic acid storage disease","type":"exact"},{"name":"sialuria, Finnish type","type":"related"}],"termid":"MONDO:0011449","terms_by_termid":{"MONDO:0011449":null},"xrefs":{"Monarch":{"xref_id":"0011449"}}}


id: PBO:0004788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase Arg4 (predicted)","termid":"PBO:0004788"}


id: PBO:0058957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 1","termid":"PBO:0058957"}


id: PBO:0050363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 66","termid":"PBO:0050363"}


id: PBO:0083391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF AIM9/YER080W","termid":"PBO:0083391"}


id: PBO:0064508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit I","termid":"PBO:0064508"}


id: PBO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic Rho guanine nucleotide exchange factor","termid":"PBO:0090236"}


id: PBO:0078871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 5","termid":"PBO:0078871"}


id: PBO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase (predicted)","termid":"PBO:0005205"}


id: GO:0140043
data:
  {"annotated_genes":["SJAG_02736","SJAG_00405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103237,117228],"is_not":false,"summary":null,"term":"GO:0140043"}]},"cv_name":"biological_process","definition":"Any process in which a lipid droplet is transported to, or maintained to the prospore membrane leading edge.","definition_xrefs":["PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid localization","termid":"GO:0010876"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_02736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipid droplet localization to prospore membrane leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adiposome localization to FSM membrane leading edge","type":"exact"},{"name":"adiposome localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"adiposome localization to forespore membrane leading edge","type":"related"},{"name":"lipid body localization to FSM membrane leading edge","type":"exact"},{"name":"lipid body localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"lipid body localization to forespore membrane leading edge","type":"related"},{"name":"lipid particle localization to FSM membrane leading edge","type":"exact"},{"name":"lipid particle localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"lipid particle localization to forespore membrane leading edge","type":"related"}],"termid":"GO:0140043","terms_by_termid":{"GO:0140043":null}}


id: MONDO:0032692
data:
  {"annotated_genes":["SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86433],"is_not":false,"summary":null,"term":"MONDO:0032692"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618348","MEDGEN:1679283","UMLS:C5193044","GARD:16344"],"synonyms":[{"name":"GALLOWAY-MOWAT SYNDROME 7","type":"related"},{"name":"GAMOS7","type":"related"}],"termid":"MONDO:0032692","terms_by_termid":{"MONDO:0032692":null},"xrefs":{"Monarch":{"xref_id":"0032692"}}}


id: GO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of the classical pathway of complement activation, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, classical pathway in another organism (obsolete GO:0044627)","synonyms":[{"name":"modulation of complement activation, classical pathway in other organism","type":"exact"},{"name":"regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044627"}


id: PBO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member G","termid":"PBO:0048912"}


id: PBO:0053903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1193","termid":"PBO:0053903"}


id: PBO:0014232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0014232"}


id: PBO:0049417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2G, pseudogene","termid":"PBO:0049417"}


id: PBO:0066193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B divergent transcript","termid":"PBO:0066193"}


id: MONDO:0850079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic bilambdoid craniosynostosis","secondary_identifiers":["GARD:22476","UMLS:C5680395","Orphanet:620178","MEDGEN:1842897"],"termid":"MONDO:0850079","xrefs":{"Monarch":{"xref_id":"0850079"}}}


id: MONDO:0034678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare non-syndromic limb malformation characterized by a hand or foot with more than five digits that has a recognizable anterior/posterior axis of symmetry, either with a hallux- or thumb-like structure or an interdigital space in the middle. The most lateral digits on each side typically resemble fifth fingers or toes. The malformation may be unilateral or bilateral and may occur in isolation or in association with other congenital anomalies. [Orphanet:498494]","definition_xrefs":["Orphanet:498494"],"gene_count":0,"genotype_count":0,"name":"obsolete mirror-image polydactyly (obsolete MONDO:0034678)","termid":"MONDO:0034678","xrefs":{"Monarch":{"xref_id":"0034678"}}}


id: MONDO:0800312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wooly hair, autosomal recessive 1, with or without hypotrichosis","secondary_identifiers":["MEDGEN:341227","UMLS:C1848435"],"synonyms":[{"name":"ARWH1","type":"exact"}],"termid":"MONDO:0800312","xrefs":{"Monarch":{"xref_id":"0800312"}}}


id: GO:0047804
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68744],"is_not":false,"summary":null,"term":"GO:0047804"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-substituted L-cysteine + H2O = a thiol + NH4+ + pyruvate.","definition_xrefs":["RHEA:18121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cysteine-S-conjugate beta-lyase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["EC:4.4.1.13","MetaCyc:RXN-6763"],"synonyms":[{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating) activity","type":"related"},{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"S-alkylcysteine lyase activity","type":"related"},{"name":"alkylcysteine lyase activity","type":"related"},{"name":"cystathionine beta-lyase activity","type":"related"},{"name":"cysteine conjugate beta-lyase activity","type":"related"},{"name":"cysteine-S-conjugate b-lyase activity","type":"exact"},{"name":"glutamine transaminase K/cysteine conjugate beta-lyase activity","type":"related"}],"termid":"GO:0047804","terms_by_termid":{"GO:0047804":null}}


id: PBO:0047813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N2","termid":"PBO:0047813"}


id: PBO:0114093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp9","termid":"PBO:0114093"}


id: GO:0047410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + charged-fMet-tRNAs = L-methionylaminoacyl-tRNA + formate.","definition_xrefs":["MetaCyc:3.5.1.27-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete N-formylmethionylaminoacyl-tRNA deformylase activity (obsolete GO:0047410)","synonyms":[{"name":"N-formyl-L-methionylaminoacyl-tRNA amidohydrolase activity","type":"exact"}],"termid":"GO:0047410"}


id: PBO:0046713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eva-1 homolog B","termid":"PBO:0046713"}


id: GO:0010528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transposition. Transposition results in the movement of discrete segments of DNA between nonhomologous sites.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transposition (obsolete GO:0010528)","termid":"GO:0010528"}


id: PBO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 1","termid":"PBO:0045797"}


id: PBO:0047727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FN1 divergent transcript","termid":"PBO:0047727"}


id: FYPO:0003070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a single-stranded DNA 5'-3' exodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000002","FYPO:0001985","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"}


id: PBO:0069725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1006, pseudogene","termid":"PBO:0069725"}


id: GO:0052416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont macromolecule (obsolete GO:0052416)","termid":"GO:0052416"}


id: FYPO:0007545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic nuclear bridge for a longer time than normal.","definition_xrefs":["PMID:32502403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic nuclear bridge","synonyms":[{"name":"increased duration of protein localisation to mitotic nuclear bridge","type":"exact"},{"name":"increased duration of protein localization to mitotic nuclear bridge during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to mitotic nuclear bridge during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic nuclear bridge","type":"exact"}],"termid":"FYPO:0007545"}


id: MONDO:0013028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adenosine monophosphate (AMP) deaminase deficiency is a metabolic disorder for which two forms have been described. Lack of activity of the erythrocyte isoform of AMP deaminase has been described in subjects with low plasma uric acid levels without obvious clinical relevance and will not be described further. Myoadenylate deaminase deficiency is an inherited disorder of muscular energy metabolism with a lack of AMP deaminase activity in skeletal muscle. It is characterized by exercise-induced muscle pain, cramps and/or early fatigue.","definition_xrefs":["Orphanet:45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005336","MONDO:0019254"],"is_obsolete":false,"name":"adenosine monophosphate deaminase deficiency","secondary_identifiers":["icd11.foundation:550341491","ICD9:277.2","GARD:547","MESH:C538234","SCTID:9105005","UMLS:C2931781","MEDGEN:444140"],"synonyms":[{"name":"AMP deaminase deficiency","type":"exact"},{"name":"myoadenylate deaminase deficiency","type":"exact"}],"termid":"MONDO:0013028","xrefs":{"Monarch":{"xref_id":"0013028"}}}


id: GO:0008423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of bleomycin B2 (a cytotoxic glycometallopeptide) by hydrolysis of a peptide bond of beta-aminoalanine, but also shows general aminopeptidase activity. The specificity varies somewhat with source, but amino acid arylamides of Met, Leu and Ala are preferred.","definition_xrefs":["EC:3.4.22.40"],"gene_count":0,"genotype_count":0,"name":"obsolete bleomycin hydrolase activity (obsolete GO:0008423)","synonyms":[{"name":"aminopeptidase C (Lactococcus lactis)","type":"narrow"},{"name":"bleomycin hydrolase activity","type":"exact"}],"termid":"GO:0008423"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: PBO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nramp family manganese ion transmembrane transporter","termid":"PBO:0017771"}


id: MONDO:0015792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, self-limiting thyroid disorder seen in preterm infants that is characterized by abnormally low serum levels of thyroxine and free thyroxine with normal serum levels of thyroid stimulating hormone.","definition_xrefs":["NCIT:C113171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient congenital hypothyroidism","secondary_identifiers":["icd11.foundation:592246939","MEDGEN:820541","Orphanet:178045","SCTID:119181000119104","UMLS:C3827793","GARD:20142"],"synonyms":[{"name":"THOP","type":"exact"},{"name":"hypothyroxinemia of prematurity","type":"exact"},{"name":"transient hypothyroxinemia of prematurity","type":"exact"}],"termid":"MONDO:0015792","xrefs":{"Monarch":{"xref_id":"0015792"}}}


id: PBO:0091976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex zeta subunit Ost5","termid":"PBO:0091976"}


id: GO:0032471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum calcium ion homeostasis","termid":"GO:0032469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum calcium ion concentration","synonyms":[{"name":"ER calcium ion concentration reduction","type":"exact"},{"name":"endoplasmic reticulum calcium ion concentration reduction","type":"exact"},{"name":"reduction of ER calcium ion concentration","type":"exact"},{"name":"reduction of calcium ion concentration in ER","type":"exact"},{"name":"reduction of calcium ion concentration in endoplasmic reticulum","type":"exact"},{"name":"reduction of endoplasmic reticulum calcium ion concentration","type":"exact"}],"termid":"GO:0032471"}


id: MONDO:1012414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hypoplasia with anasarca, non-human animal","termid":"MONDO:1011717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypoplasia with anasarca, cattle","secondary_identifiers":["OMIA:001562-9913"],"termid":"MONDO:1012414","xrefs":{"Monarch":{"xref_id":"1012414"}}}


id: GO:1903375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an acoustico-facial VII-VIII ganglion complex over time, from its formation to the mature structure.","definition_xrefs":["GOC:PARL","GO_REF:0000094","GOC:TermGenie","GOC:bf","PMID:18356247","GOC:mat"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facioacoustic ganglion development","synonyms":[{"name":"acoustico-facial VII-VIII ganglion complex development","type":"exact"},{"name":"acousticofacial ganglion development","type":"exact"},{"name":"facio-acoustic VII-VIII ganglion complex development","type":"exact"},{"name":"facio-acoustic ganglion complex VII-VIII development","type":"exact"},{"name":"facio-acoustic ganglion development","type":"exact"}],"termid":"GO:1903375"}


id: GO:0006449
data:
  {"annotated_genes":["SJAG_05265","SJAG_02812","SJAG_02189","SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74431],"is_not":false,"summary":null,"term":"GO:0006449"},{"annotations":[66594,76836,68833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00642":null,"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null},"termid":"GO:0006449","terms_by_termid":{"GO:0006449":null,"GO:0045905":null}}


id: GO:0032357
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73948],"is_not":false,"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized purine residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized DNA binding","termid":"GO:0032356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"oxidized purine DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxidised purine DNA binding","type":"exact"},{"name":"oxidized purine base DNA binding","type":"exact"},{"name":"oxidized purine nucleobase DNA binding","type":"exact"}],"termid":"GO:0032357","terms_by_termid":{"GO:0032357":null}}


id: GO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA region within the transcript that regulates the transcription of a gene, cistron, or operon.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory region RNA binding","termid":"GO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"transcription regulatory region RNA binding","termid":"GO:0001068"}


id: PBO:0086134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for maturation of mitochondrial [4Fe-4S] proteins; functions in a complex with Isa2p and possibly Iba57p; isa1 deletion causes loss of mitochondrial DNA and respiratory deficiency; depletion reduces growth on nonfermentable carbon sources; functional ortholog of bacterial A-type ISC proteins; human ISCA1 can complement isa1 null mutant","termid":"PBO:0086134"}


id: GO:0043842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (KDO)-lipid IVA + CMP-3-deoxy-D-manno-octulosonate = KDO2-lipid IVA + CMP, and lipid IVA + CMP-3-deoxy-D-manno-octulosonate = (KDO)-lipid IVA + CMP.","definition_xrefs":["PMID:9195966","PMID:1577828","PMID:2033061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"Kdo transferase activity","synonyms":[{"name":"3-deoxy-D-manno-octulosonic-acid transferase activity","type":"exact"},{"name":"WaaA","type":"related"},{"name":"kdtA","type":"related"}],"termid":"GO:0043842"}


id: MONDO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 10 syndrome is characterized by intellectual deficit, growth retardation, and various dysmorphic features. Less than 20 cases have been described. The main features are low birth weight, microcephaly, stubby nose with a prominent nasal bridge, hypertelorism, strabismus, wide-set nipples, single transverse palmar creases, and clinodactyly. Boys have undescended testes and hypoplastic scrotum. Congenital heart disease, hydronephrosis or renal hypoplasia was present in some of the cases.","definition_xrefs":["Orphanet:1438"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome 10 disorder","termid":"MONDO:0700017"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 10","secondary_identifiers":["UMLS:C0265438","MEDGEN:539252","GARD:1322","MESH:C538086","SCTID:86997002"],"synonyms":[{"name":"Ring 10","type":"related"},{"name":"Ring chromosome 10 syndrome","type":"related"},{"name":"Ring chromosome type 10","type":"exact"},{"name":"chromosome 10 ring","type":"related"},{"name":"r10","type":"related"}],"termid":"MONDO:0015431","xrefs":{"Monarch":{"xref_id":"0015431"}}}


id: GO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable heterodimeric complex composed of polycystin-1 and polycystin-2.","definition_xrefs":["GOC:hjd","PMID:11901144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"polycystin complex","termid":"GO:0002133"}


id: PBO:0089850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Srm160","termid":"PBO:0089850"}


id: GO:0072154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an S1 cell in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 cell differentiation","termid":"GO:0072062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell fate commitment","synonyms":[{"name":"S1 cell fate commitment","type":"exact"}],"termid":"GO:0072154"}


id: GO:0002806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide biosynthetic process","synonyms":[{"name":"down regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"downregulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"inhibition of antimicrobial peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002806"}


id: MONDO:0016647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare type of Stickler syndrome characterized by moderate to severe sensorineural hearing loss, high myopia, retinal degeneration, vitreous anomalies, and epiphyseal dysplasia. Midface hypoplasia, cleft palate, as well as additional skeletal manifestations (such as platyspondyly, scoliosis, and tibial and femoral bowing at birth) have also been observed.","definition_xrefs":["Orphanet:250984"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive Stickler syndrome (obsolete MONDO:0016647)","synonyms":[{"name":"Stickler syndrome, autosomal recessive","type":"exact"}],"termid":"MONDO:0016647","xrefs":{"Monarch":{"xref_id":"0016647"}}}


id: PBO:0070113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 27 pseudogene","termid":"PBO:0070113"}


id: FYPO:0002146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate (DEM) is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to DEM","synonyms":[{"name":"normal RNA accumulation during cellular response to DEM","type":"related"},{"name":"normal RNA level during cellular response to DEM during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to DEM during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to diethyl maleate","type":"exact"},{"name":"normal mRNA level during cellular response to DEM","type":"narrow"},{"name":"normal transcript level during cellular response to DEM","type":"exact"}],"termid":"FYPO:0002146"}


id: PBO:0051065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-17","termid":"PBO:0051065"}


id: PBO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly homolog COX15","termid":"PBO:0043765"}


id: PBO:0082420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and 1-acyl DHAP reductase; NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase involved in phosphatidic acid biosynthesis; lipid droplet triacylglycerol lipase involved in mobilization of non-polar lipids; found in lipid particles, endoplasmic reticulum and mitochondrial outer membrane; forms NADPH-regulated channel in mitochondrial outer membrane; required for spore germination; role in cell wall biosynthesis; capable of metabolizing steroid hormones","termid":"PBO:0082420"}


id: PBO:0039285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 14, pseudogene","termid":"PBO:0039285"}


id: PBO:0083370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF ALG3","termid":"PBO:0083370"}


id: GO:0071923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah","GOC:lb","PMID:17113138"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin loading (obsolete GO:0071923)","synonyms":[{"name":"negative regulation of cohesin association with chromatin","type":"exact"},{"name":"negative regulation of cohesin localisation to chromatin","type":"exact"},{"name":"negative regulation of cohesin localization to chromatin","type":"related"}],"termid":"GO:0071923"}


id: MONDO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis of gingiva and conjunctiva, with intellectual disability","secondary_identifiers":["MESH:C565958","OMIM:204850","UMLS:C1859815","MEDGEN:347240"],"synonyms":[{"name":"Hornova Dlushosova syndrome","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva with intellectual disability","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva with mental retardation","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva, with intellectual disability","type":"exact"},{"name":"amyloidosis of gingiva and conjunctiva, with mental retardation","type":"exact"}],"termid":"MONDO:0008776","xrefs":{"Monarch":{"xref_id":"0008776"}}}


id: PBO:0083072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacid dehydratase; putative 2Fe-2S protein; catalyzes third step in the common pathway leading to biosynthesis of branched-chain amino acids","termid":"PBO:0083072"}


id: GO:2000945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of amylopectin metabolic process","termid":"GO:2000942"},{"relation_name":"regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amylopectin catabolic process","synonyms":[{"name":"regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000945"}


id: PBO:0108898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 11","termid":"PBO:0108898"}


id: PBO:0047315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 5","termid":"PBO:0047315"}


id: PBO:0082209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; integral membrane glycoprotein of the Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides, one of five S. cerevisiae proteins of the MNN1 family","termid":"PBO:0082209"}


id: PBO:0061751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1","termid":"PBO:0061751"}


id: MONDO:0017949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis (HCHWA), Arctic type is a form of HCHWA characterized by an age of onset of 54-61 years and progressive Alzheimer's disease-like dementia, without intracerebral hemorrhages.","definition_xrefs":["Orphanet:324723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta amyloidosis, Arctic type","secondary_identifiers":["GARD:17493","ICD10EXP:E85.4+","ICD10EXP:I68.0*","UMLS:C2751494","MEDGEN:414032"],"synonyms":[{"name":"ABetaE22G amyloidosis","type":"exact"},{"name":"HCHWA, Arctic type","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Arctic variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Arctic type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Arctic type","type":"exact"}],"termid":"MONDO:0017949","xrefs":{"Monarch":{"xref_id":"0017949"}}}


id: PBO:0028074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_cut","termid":"PBO:0028074"}


id: GO:0031542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"positive regulation of anthocyanin metabolic process","termid":"GO:0031539"},{"relation_name":"is_a","term_name":"regulation of anthocyanin biosynthetic process","termid":"GO:0031540"},{"relation_name":"positively_regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anthocyanin biosynthetic process","synonyms":[{"name":"activation of anthocyanin biosynthetic process","type":"narrow"},{"name":"positive regulation of anthocyanin anabolism","type":"exact"},{"name":"positive regulation of anthocyanin biosynthesis","type":"exact"},{"name":"positive regulation of anthocyanin formation","type":"exact"},{"name":"positive regulation of anthocyanin synthesis","type":"exact"},{"name":"stimulation of anthocyanin biosynthetic process","type":"narrow"},{"name":"up regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"up-regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"upregulation of anthocyanin biosynthetic process","type":"exact"}],"termid":"GO:0031542"}


id: GO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates blood pressure at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of blood pressure","type":"exact"},{"name":"master pacemaker clock regulation of blood pressure","type":"exact"}],"termid":"GO:0003054"}


id: GO:0160130
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of RNA guanine-7 methyltransferase (RNMT) and RNA guanine-7 methyltransferase activating subunit (RAMAC) and is involved in mRNA cap methylation.","definition_xrefs":["PMID:22099306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mRNA cap methyltransferase RNMT:RAMAC complex","termid":"GO:0160130"}


id: PBO:0068520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 115, pseudogene","termid":"PBO:0068520"}


id: MONDO:0017670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant diffuse mutilating palmoplantar keratoderma (obsolete MONDO:0017670)","secondary_identifiers":["Orphanet:307773"],"synonyms":[{"name":"autosomal dominant diffuse mutilating palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017670","xrefs":{"Monarch":{"xref_id":"0017670"}}}


id: MONDO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the musculoskeletal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of musculoskeletal system","secondary_identifiers":["DOID:0060032"],"synonyms":[{"name":"musculoskeletal system autoimmune disease","type":"exact"},{"name":"musculoskeletal system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000589","xrefs":{"Monarch":{"xref_id":"0000589"}}}


id: PBO:0049012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol specific phospholipase D1","termid":"PBO:0049012"}


id: GO:0140735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lovastatin (also known as mevinolin, mevacor or monacolin K), a hypolipidemic inhibitor of (3S)-hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR).","definition_xrefs":["PMID:10334994","PMID:10381407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lovastatin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-7535","kegg.module:M00893"],"synonyms":[{"name":"lovastatin anabolism","type":"exact"},{"name":"lovastatin biosynthesis","type":"exact"},{"name":"lovastatin formation","type":"exact"},{"name":"lovastatin synthesis","type":"exact"},{"name":"mevacor anabolism","type":"exact"},{"name":"mevacor biosynthesis","type":"exact"},{"name":"mevacor biosynthetic process","type":"exact"},{"name":"mevacor formation","type":"exact"},{"name":"mevacor synthesis","type":"exact"},{"name":"mevinolin anabolism","type":"exact"},{"name":"mevinolin biosynthesis","type":"exact"},{"name":"mevinolin biosynthetic process","type":"exact"},{"name":"mevinolin formation,","type":"exact"},{"name":"mevinolin synthesis","type":"exact"},{"name":"monacolin K anabolism","type":"exact"},{"name":"monacolin K biosynthesis","type":"exact"},{"name":"monacolin K biosynthetic process","type":"exact"},{"name":"monacolin K formation","type":"exact"},{"name":"monacolin K synthesis","type":"exact"}],"termid":"GO:0140735"}


id: PBO:0067606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 774, pseudogene","termid":"PBO:0067606"}


id: PBO:0072952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase cancer associated transcript 8","termid":"PBO:0072952"}


id: GO:0016641
data:
  {"annotated_genes":["SJAG_01881","SJAG_02496","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[115055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[112137,76110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.3.-"],"termid":"GO:0016641","terms_by_termid":{"GO:0003884":null,"GO:0004733":null,"GO:0043799":null}}


id: MONDO:0020593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign hair follicle neoplasm with trichoblastic differentiation. It usually presents as a solitary papular lesion It most often presents on the head and neck area, but it may develop in any anatomic site containing hair follicles. Because of its benign nature, treatment usually is not required, provided that the diagnosis has been established with certainty.","definition_xrefs":["NCIT:C27132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichoblastoma","secondary_identifiers":["UMLS:C0349658","ICDO:8100/0","icd11.foundation:1414797713","MEDGEN:138112"],"synonyms":[{"name":"Brooke's tumor","type":"exact"},{"name":"Brooke's tumour","type":"exact"},{"name":"trichoblastoma","type":"exact"},{"name":"trichoepithelioma","type":"exact"},{"name":"trichoepithelioma, benign","type":"exact"},{"name":"trichogenic adnexal tumor","type":"exact"},{"name":"trichogenic adnexal tumour","type":"exact"},{"name":"trichogenic trichoblastoma","type":"exact"}],"termid":"MONDO:0020593","xrefs":{"Monarch":{"xref_id":"0020593"}}}


id: MONDO:0008030
data:
  {"annotated_genes":["SJAG_02396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86506],"is_not":false,"summary":null,"term":"MONDO:0008030"}]},"cv_name":"mondo","definition":"Any facioscapulohumeral muscular dystrophy in which the cause of the disease is a mutation in the FRG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0019303"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111192","UMLS:C5399970","GARD:15087","NCIT:C172704","OMIM:158900","MESH:C536391","MEDGEN:1727901"],"synonyms":[{"name":"FMD","type":"broad"},{"name":"FRG1 facioscapulohumeral muscular dystrophy","type":"exact"},{"name":"FSHD","type":"broad"},{"name":"FSHD1","type":"related"},{"name":"FSHD1A","type":"related"},{"name":"FSHMD1A","type":"related"},{"name":"Landouzy-Dejerine muscular dystrophy","type":"related"},{"name":"Landouzy-Dejerine muscular dystrophy facioscapulohumeral muscular dystrophy, infantile, included","type":"related"},{"name":"facioscapulohumeral dystrophy with sensorineural hearing loss and tortuosity of retinal arterioles","type":"related"},{"name":"facioscapulohumeral dystrophy with sensorineural hearing loss and tortuosity of retinal arterioles, included","type":"related"},{"name":"facioscapulohumeral muscular dystrophy","type":"broad"},{"name":"facioscapulohumeral muscular dystrophy 1","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 1A","type":"related"},{"name":"facioscapulohumeral muscular dystrophy caused by mutation in FRG1","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy type 1","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy, infantile","type":"related"},{"name":"muscular dystrophy, facioscapulohumeral","type":"related"},{"name":"muscular dystrophy, facioscapulohumeral, type 1","type":"related"},{"name":"muscular dystrophy, facioscapulohumeral, type 1A","type":"narrow"}],"termid":"MONDO:0008030","terms_by_termid":{"MONDO:0008030":null},"xrefs":{"Monarch":{"xref_id":"0008030"}}}


id: MOD:00804
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-beta-glucosylated L-serine.","definition_xrefs":["PubMed:2511201","PubMed:10734111","RESID:AA0397","PubMed:2105311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Glc) serine","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"O-glucosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-glucosylserine","type":"exact"},{"name":"OGlcSer","type":"exact"}],"termid":"MOD:00804"}


id: PBO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localization could be overexpression artifact","termid":"PBO:0005479"}


id: PBO:0076760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDH antisense RNA 1","termid":"PBO:0076760"}


id: MONDO:0700271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the CHEK2 gene. Pathogenic germline variation in CHEK2 confers an autosomal dominant predisposition to tumor formation at multiple primary sites, including breast cancer and prostate cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2-related cancer predisposition","termid":"MONDO:0700271","xrefs":{"Monarch":{"xref_id":"0700271"}}}


id: PBO:0050874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta","termid":"PBO:0050874"}


id: PBO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.3","termid":"PBO:0001863"}


id: MONDO:0044626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female infertility","termid":"MONDO:0021124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"female infertility due to oocyte meiotic arrest","secondary_identifiers":["Orphanet:488191","MEDGEN:1798912","UMLS:C5567489","GARD:17887"],"termid":"MONDO:0044626","xrefs":{"Monarch":{"xref_id":"0044626"}}}


id: PBO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRNA virus; member of the Sm protein family","termid":"PBO:0085035"}


id: MONDO:0030906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Trichomonas tenax.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas tenax infectious disease","secondary_identifiers":["DOID:0050270"],"synonyms":[{"name":"Trichomonas tenax caused disease or disorder","type":"exact"},{"name":"Trichomonas tenax disease or disorder","type":"exact"},{"name":"Trichomonas tenax trichomoniasis","type":"related"}],"termid":"MONDO:0030906","xrefs":{"Monarch":{"xref_id":"0030906"}}}


id: FYPO:0000620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in metaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic metaphase","synonyms":[{"name":"abnormal cell cycle arrest in metaphase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest with unseparated chromosomes","type":"related"},{"name":"abnormal mitotic cell cycle arrest in metaphase","type":"exact"},{"name":"abolished mitotic metaphase/anaphase transition","type":"related"},{"name":"mitotic cell cycle progression in metaphase: arrested","type":"related"}],"termid":"FYPO:0000620"}


id: GO:0140014
data:
  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id: PBO:0114640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sulfur depletion response, Sdr1","termid":"PBO:0114640"}


id: FYPO:0007385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a longer time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:28366743","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"increased duration of protein-protein interaction","synonyms":[{"name":"increased duration of protein binding","type":"exact"}],"termid":"FYPO:0007385"}


id: PBO:0050272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMGN3 antisense RNA 1","termid":"PBO:0050272"}


id: FYPO:0005652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle is abnormal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000120","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"abnormal spindle morphology during meiosis I","synonyms":[{"name":"abnormal spindle morphology during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005652"}


id: GO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a post-lysosomal vacuole, a membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:22008230","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-lysosomal vacuole size","synonyms":[{"name":"regulation of post-lysosome size","type":"exact"},{"name":"regulation of postlysosomal vacuole size","type":"exact"},{"name":"regulation of postlysosome vacuole size","type":"exact"}],"termid":"GO:0044656"}


id: GO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of podosome assembly.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of podosome assembly","termid":"GO:0071801"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of podosome assembly","synonyms":[{"name":"down regulation of podosome assembly","type":"exact"},{"name":"down-regulation of podosome assembly","type":"exact"},{"name":"downregulation of podosome assembly","type":"exact"},{"name":"inhibition of podosome assembly","type":"narrow"}],"termid":"GO:0071802"}


id: MONDO:0022785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate cardiac defect ectrodactyly","termid":"MONDO:0022785","xrefs":{"Monarch":{"xref_id":"0022785"}}}


id: MOD:01903
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks two L-serine residues to form serine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:21568297","PubMed:21950656","RESID:AA0574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine oxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1-azanyl-2-hydroxyethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Ser-Ser)","type":"exact"},{"name":"L-serine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01903"}


id: GO:0052091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of nutrient release by host","synonyms":[{"name":"modulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052091"}


id: GO:1904519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a microtubule minus-end.","definition_xrefs":["PMID:25987607","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule end","termid":"GO:1905725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule minus-end","synonyms":[{"name":"protein localisation in microtubule minus-end","type":"exact"},{"name":"protein localisation to microtubule minus-end","type":"exact"},{"name":"protein localization in microtubule minus-end","type":"exact"}],"termid":"GO:1904519"}


id: PBO:0060881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 2","termid":"PBO:0060881"}


id: PBO:0066633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein like 2","termid":"PBO:0066633"}


id: GO:0044145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"modulation of development of symbiont during interaction with host","type":"related"},{"name":"modulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044145"}


id: PBO:0040509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin induced 1","termid":"PBO:0040509"}


id: PBO:0072975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 1","termid":"PBO:0072975"}


id: GO:0044294
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing nerve cell dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone","termid":"GO:0030426"},{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic growth cone","secondary_identifiers":["NIF_Subcellular:sao1594955670"],"synonyms":[{"name":"dendrite growth cone","type":"exact"}],"termid":"GO:0044294"}


id: PR:G2TRQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam13 gene.","definition_xrefs":["UniProtKB:G2TRQ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.15","synonyms":[{"name":"Spom972h-tam13","type":"exact"},{"name":"transcripts altered in meiosis protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ0"}


id: FYECO:0000460
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which potassium acetate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ potassium acetate","termid":"FYECO:0000460"}


id: MONDO:0018712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate, locally aggressive and rarely metastasizing blood vessel neoplasm. It is characterized by the presence of spindle, plump, and epithelioid endothelial cells and cellular atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"composite hemangioendothelioma","secondary_identifiers":["GARD:21907","SCTID:403984006","Orphanet:458758","MEDGEN:220987","UMLS:C1304513","NCIT:C45475"],"synonyms":[{"name":"composite hemangioendothelioma","type":"exact"}],"termid":"MONDO:0018712","xrefs":{"Monarch":{"xref_id":"0018712"}}}


id: GO:1990404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: amino acyl-[protein] + NAD+ = H+ + (ADP-D-ribosyl)-amino acyl-[protein] + nicotinamide.","definition_xrefs":["PMID:1899243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"NAD+-protein mono-ADP-ribosyltransferase activity","secondary_identifiers":["Wikipedia:ADP-ribosylation"],"synonyms":[{"name":"NAD+ ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+-protein ADP-ribosyltransferase activity","type":"broad"},{"name":"protein ADP-ribosylase activity","type":"exact"},{"name":"protein ADP-ribosyltransferase activity","type":"broad"},{"name":"protein mono-ADP-ribosyltransferase activity","type":"exact"},{"name":"ribosylase activity","type":"broad"}],"termid":"GO:1990404"}


id: MONDO:0011655
data:
  {"annotated_genes":["SJAG_00490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86655],"is_not":false,"summary":null,"term":"MONDO:0011655"}]},"cv_name":"mondo","definition":"An alveolar soft part sarcoma occurring in adults. The most common site of involvement is the extremity, particularly the deep soft tissues of the thigh.","definition_xrefs":["NCIT:C7943"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal muscle cancer","termid":"MONDO:0002847"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00490":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar soft part sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:171.9","Orphanet:163699","SCTID:404056007","DOID:4239","GARD:5654","HP:0012218","NCIT:C3750","MEDGEN:61652","MedDRA:10001882","OMIM:606243","EFO:0007143","NORD:760","UMLS:C0206657","MESH:D018234","ICDO:9581/3","NANDO:2200063","ONCOTREE:ASPS"],"synonyms":[{"name":"ASPS","type":"exact"},{"name":"adult alveolar soft Part sarcoma","type":"exact"},{"name":"adult alveolar soft part sarcoma","type":"exact"},{"name":"adult alveolar soft-Part sarcoma","type":"exact"},{"name":"alveolar soft PART sarcoma","type":"related"},{"name":"alveolar soft Part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma (disease)","type":"exact"},{"name":"alveolar soft tissue sarcoma","type":"related"},{"name":"alveolar soft-part sarcoma","type":"exact"},{"name":"alveolar soft-tissue sarcoma","type":"related"},{"name":"childhood alveolar soft part sarcoma","type":"narrow"},{"name":"paediatric alveolar soft Part sarcoma","type":"narrow"},{"name":"pediatric alveolar soft Part sarcoma","type":"narrow"}],"termid":"MONDO:0011655","terms_by_termid":{"MONDO:0011655":null},"xrefs":{"Monarch":{"xref_id":"0011655"}}}


id: PBO:0039930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 35","termid":"PBO:0039930"}


id: GO:0016034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-maleylacetoacetate = 4-fumarylacetoacetate.","definition_xrefs":["EC:5.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"maleylacetoacetate isomerase activity","secondary_identifiers":["MetaCyc:MALEYLACETOACETATE-ISOMERASE-RXN","GO:0018841","RHEA:14817","UM-BBD_reactionID:r0106","Reactome:R-HSA-71173"],"synonyms":[{"name":"4-maleylacetoacetate cis-trans-isomerase activity","type":"related"},{"name":"maleylacetoacetic isomerase activity","type":"related"},{"name":"maleylacetone cis-trans-isomerase activity","type":"related"},{"name":"maleylacetone isomerase activity","type":"related"}],"termid":"GO:0016034"}


id: GO:1903436
data:
  {"annotated_genes":["SJAG_03309","SJAG_04597","SJAG_02380","SJAG_03704","SJAG_03631","SJAG_00514","SJAG_01805","SJAG_01188","SJAG_05290","SJAG_03936","SJAG_00845","SJAG_03048","SJAG_01787","SJAG_02592","SJAG_00256","SJAG_02838","SJAG_04776","SJAG_02392","SJAG_04468","SJAG_00082","SJAG_01114","SJAG_04666","SJAG_03581","SJAG_03342"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[104015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[102689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[90339,94747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[94916,113671,87878,94748,110835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[119520,111077,91107,104020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[92757,106704,118192,94143,107366,105504,113672,90209,78276,115773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[94751,92758,87879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[119676,94149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[88195,101710,111684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:1903436","terms_by_termid":{"GO:0120306":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:0015480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Secretins are Gram-negative bacterial outer membrane proteins that form multimeric pores through which macromolecules, usually proteins, can pass. Form homomultimeric ring structures, 10-20 subunits per complex, with large central pores (inner diameters of 5-10 nm).","definition_xrefs":["TC:1.B.22.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete secretin (sensu Bacteria) (obsolete GO:0015480)","synonyms":[{"name":"secretin (sensu Bacteria)","type":"exact"}],"termid":"GO:0015480"}


id: MONDO:0003605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A neuroblastoma arising from the adrenal gland.","definition_xrefs":["NCIT:C4827"],"gene_count":0,"genotype_count":0,"name":"obsolete adrenal neuroblastoma (obsolete MONDO:0003605)","termid":"MONDO:0003605","xrefs":{"Monarch":{"xref_id":"0003605"}}}


id: GO:0102521
data:
  {"annotated_genes":["SJAG_04265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62924],"is_not":false,"summary":null,"term":"GO:0102521"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + S-adenosyl-L-methionine + N1-methylguanine37 in tRNAPhe = L-methionine + 5'-deoxyadenosine + carbon dioxide + H2O + 4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["RHEA:36347","PMID:34184886","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0016829","GO:0140101"],"is_obsolete":false,"name":"tRNA-4-demethylwyosine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:4.1.3.44","MetaCyc:RXN-14516"],"termid":"GO:0102521","terms_by_termid":{"GO:0102521":null}}


id: PBO:0113199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts with Tma46p, Ygr250cp, Gir2p and Yap1p via two-hybrid; localizes to cytosol and peroxisomes","termid":"PBO:0113199"}


id: GO:0061700
data:
  {"annotated_genes":["SJAG_00209","SJAG_02424","SJAG_04496","SJAG_00561","SJAG_03907"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75789,88360,88650,89754,106886],"is_not":false,"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A multiprotein subcomplex of the GATOR complex that regulates TORC1 signaling by interacting with the Rag GTPase. In human, this complex consists of WDR24, WDR59, MIOS, SEH1L, and SEC13. In S. cerevisiae, this complex is referred to as SEACAT and contains the Sea2p, Sea3p, Sea4p, Seh1p, Sec13p proteins.","definition_xrefs":["GOC:rb","PMID:25934700","GOC:krc","PMID:23723238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"Seh1-associated complex","termid":"GO:0035859"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_02424":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GATOR2 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SEACAT complex","type":"exact"}],"termid":"GO:0061700","terms_by_termid":{"GO:0061700":null}}


id: PBO:0063922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 1","termid":"PBO:0063922"}


id: MONDO:0009683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2H (LGMD2H) is a mild subtype of autosomal recessive limb girdle muscular dystrophy characterized by slowly progressive proximal muscle weakness and wasting of the pelvic and shoulder girdles with onset that usually occurs during the second or third decade of life. Clinical presentation is variable and can include calf psuedohypertrophy, joint contractures, scapular winging, muscle cramping and/or facial and respiratory muscle involvement.","definition_xrefs":["Orphanet:1878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of TRIM32","termid":"MONDO:0016153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2H","secondary_identifiers":["MESH:C535897","UMLS:C0270968","GARD:3844","OMIM:254110","SCTID:43226001","DOID:0110282","ICD9:359.89","MEDGEN:78750"],"synonyms":[{"name":"LGMD2H","type":"exact"},{"name":"Sarcotubular myopathy","type":"exact"},{"name":"TRIM32 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TRIM32","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2H","type":"exact"},{"name":"limb-girdle muscular dystrophy due to TRIM32 deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2H","type":"related"},{"name":"muscular dystrophy Hutterite type","type":"exact"},{"name":"muscular dystrophy limb-girdle type 2H","type":"related"},{"name":"muscular dystrophy, Hutterite type","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 8","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2H","type":"related"},{"name":"sarcotubular myopathy","type":"exact"}],"termid":"MONDO:0009683","xrefs":{"Monarch":{"xref_id":"0009683"}}}


id: PBO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl-tRNA synthetase subunit alpha","termid":"PBO:0047303"}


id: GO:0010785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles that will move from the plasma membrane to the endosome, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coating of Golgi vesicle","termid":"GO:0048202"},{"relation_name":"part_of","term_name":"vesicle targeting, plasma membrane to endosome","termid":"GO:0048201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle, plasma membrane to endosome targeting","termid":"GO:0010785"}


id: PBO:0080654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE2 oocyte meiosis inhibiting kinase","termid":"PBO:0080654"}


id: PBO:0114294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein anchor Pex26","termid":"PBO:0114294"}


id: GO:0090689
data:
  {"annotated_genes":["SJAG_02572","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88331,91617],"is_not":false,"summary":null,"term":"GO:0090689"}]},"cv_name":"cellular_component","definition":"The 'trough' of the cleavage furrow. This is the part of the cleavage furrow closest to the contractile ring.","definition_xrefs":["PMID:27082518","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cleavage furrow","termid":"GO:0032154"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02572":null,"SJAG_03915":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cleavage furrow leading edge","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090689","terms_by_termid":{"GO:0090689":null}}


id: PBO:0082514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the histone acetyltransferase complex (NuA4); acetylates four conserved internal lysines of histone H4 N-terminal tail and can acetylate histone H2A; master regulator of cellular acetylation balance; required for cell cycle progression and transcriptional silencing at the rDNA locus and regulation of autophagy; human ortholog TIP60/KAT5 is implicated in cancer and other diseases, functionally complements lethality of the esa1 null mutation","termid":"PBO:0082514"}


id: PBO:0044576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor, acyl-CoA binding protein","termid":"PBO:0044576"}


id: PBO:0047892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(q21)","termid":"PBO:0047892"}


id: GO:1901558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metformin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to metformin","termid":"GO:1901558"}


id: PBO:0058461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5190","termid":"PBO:0058461"}


id: PBO:0064514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 1","termid":"PBO:0064514"}


id: SO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_isopentenyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_isopentenyladenosine","secondary_identifiers":["RNAMOD:006"],"synonyms":[{"name":"N6 isopentenyladenosine","type":"exact"},{"name":"N6-isopentenyladenosine","type":"exact"},{"name":"i6A","type":"exact"}],"termid":"SO:0001300"}


id: PBO:0076935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 3","termid":"PBO:0076935"}


id: PBO:0091679
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GCP3","termid":"PBO:0091679"}


id: PBO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SKN7","termid":"PBO:0015697"}


id: FYPO:0006433
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119547],"is_not":false,"summary":null,"term":"FYPO:0006433"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the tubular endoplasmic reticulum (ER) is abnormal. The tubular ER is the portion of the ER that consists of tubules having membranes with high curvature in cross-section.","definition_xrefs":["PomBase:mah","GO:0071782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal tubular endoplasmic reticulum morphology","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal ER tubular network morphology","type":"exact"},{"name":"abnormal endoplasmic reticulum tubular network morphology","type":"exact"},{"name":"abnormal tubular ER morphology","type":"exact"},{"name":"abnormal tubular endoplasmic reticulum morphology during mitotic cell cycle","type":"related"},{"name":"abnormal tubular endoplasmic reticulum morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0006433","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PBO:0055858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 5","termid":"PBO:0055858"}


id: MONDO:0033169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curariform drugs toxicity","secondary_identifiers":["Orphanet:413693"],"termid":"MONDO:0033169","xrefs":{"Monarch":{"xref_id":"0033169"}}}


id: PBO:0042257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 3 pseudogene 1","termid":"PBO:0042257"}


id: GO:0019887
data:
  {"annotated_genes":["SJAG_03371","SJAG_02057","SJAG_00613","SJAG_00424","SJAG_03936","SJAG_02232","SJAG_03340","SJAG_04140","SJAG_04200","SJAG_00973","SJAG_04666","SJAG_03453","SJAG_05030","SJAG_00439","SJAG_01401","SJAG_01274","SJAG_03699","SJAG_01245","SJAG_02404","SJAG_01020","SJAG_01716","SJAG_02785","SJAG_04509","SJAG_01000","SJAG_01213","SJAG_04614","SJAG_04020","SJAG_02332","SJAG_01118","SJAG_04502","SJAG_03618","SJAG_03090","SJAG_00236","SJAG_02605","SJAG_00318","SJAG_00457","SJAG_03525","SJAG_05017","SJAG_03695","SJAG_00100","SJAG_03974","SJAG_03802","SJAG_00333","SJAG_03591","SJAG_01821","SJAG_01411","SJAG_01605","SJAG_05978","SJAG_02026","SJAG_01210","SJAG_03931","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72924,98079,116446,118685],"is_not":false,"summary":null,"term":"GO:0019887"},{"annotations":[71330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[92480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[117374,66334,70633,111514,101945,74360,80128,113275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[109210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[79459,70540,71824,70957,108676,62437,74168,106583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[91648,89560,116623,78798,73297,70472,72509,70811,107461,99519,111745,112791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[107334,76269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[75856,109584,75862,91528,89783,69284,89575,92770,88250,105449,110858,118671,91197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[118342,108725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01000":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_03974":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"protein kinase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019887","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019887":null,"GO:0019912":null,"GO:0030291":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: MONDO:0012050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"major depressive disorder","termid":"MONDO:0002009"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major depressive disorder 1","secondary_identifiers":["MESH:C563919","OMIM:608520","MEDGEN:325293","UMLS:C1837929"],"synonyms":[{"name":"MDD1","type":"exact"},{"name":"major depressive disorder 1","type":"exact"},{"name":"major depressive disorder type 1","type":"exact"},{"name":"unipolar depression 1","type":"related"}],"termid":"MONDO:0012050","xrefs":{"Monarch":{"xref_id":"0012050"}}}


id: MONDO:0022645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardioencephalomyopathy","termid":"MONDO:0022645","xrefs":{"Monarch":{"xref_id":"0022645"}}}


id: FYPO:0000561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic G1 phase progression","synonyms":[{"name":"mitotic cell cycle progression in G1 phase: normal","type":"related"},{"name":"normal G1 phase progression during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G1 phase progression during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression in G1","type":"exact"}],"termid":"FYPO:0000561"}


id: PR:Q9Y7K1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase MsrB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C216.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.04c","secondary_identifiers":["UniProtKB:Q9Y7K1"],"synonyms":[{"name":"Spom972h-msrB","type":"exact"}],"termid":"PR:Q9Y7K1"}


id: PBO:0053548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 555","termid":"PBO:0053548"}


id: MONDO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Krabbe disease that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005244","MONDO:0002525","MONDO:0005066","MONDO:0002561","MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"adult Krabbe disease","secondary_identifiers":["GARD:20345","NANDO:2201219","MEDGEN:120623","NANDO:1200077","Orphanet:206448","UMLS:C0268252","icd11.foundation:699668826"],"synonyms":[{"name":"Krabbe disease of adults","type":"exact"}],"termid":"MONDO:0016091","xrefs":{"Monarch":{"xref_id":"0016091"}}}


id: PBO:0080015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 1","termid":"PBO:0080015"}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:1.1.99.25-RXN","EC:1.1.5.8","KEGG_REACTION:R01873"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: PBO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpromazine","termid":"PBO:0030823"}


id: GO:0003340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003339"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003340"}


id: PBO:0059005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMADHC pseudogene 1","termid":"PBO:0059005"}


id: PBO:0056848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mahogunin ring finger 1","termid":"PBO:0056848"}


id: PATO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being wound in a continuous series of loops.","definition_xrefs":["Online_Dictionary:Online_Dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiling","termid":"PATO:0001794"}


id: MONDO:0012202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malaria, susceptibility to","termid":"MONDO:0021024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malaria, mild, susceptibility to","secondary_identifiers":["UMLS:C1836721","OMIM:609148","MEDGEN:332274"],"synonyms":[{"name":"Mals","type":"related"},{"name":"malaria, mild, susceptibility to","type":"exact"},{"name":"susceptibility to mild malaria","type":"related"}],"termid":"MONDO:0012202","xrefs":{"Monarch":{"xref_id":"0012202"}}}


id: MONDO:0029811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laminopathy with peripheral neuropathy (obsolete MONDO:0029811)","secondary_identifiers":["Orphanet:300758"],"termid":"MONDO:0029811","xrefs":{"Monarch":{"xref_id":"0029811"}}}


id: PBO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inducer phosphatase Cdc25","termid":"PBO:0000387"}


id: PBO:0060444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD kinase","termid":"PBO:0060444"}


id: MONDO:1011463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, sheep","secondary_identifiers":["OMIA:000033-9940"],"termid":"MONDO:1011463","xrefs":{"Monarch":{"xref_id":"1011463"}}}


id: GO:1904905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:19460962","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"negatively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"down regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"down-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"downregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"inhibition of endothelial cell-matrix adhesion via fibronectin","type":"narrow"}],"termid":"GO:1904905"}


id: PBO:0052659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 27","termid":"PBO:0052659"}


id: PBO:0056186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin associated glycoprotein","termid":"PBO:0056186"}


id: PBO:0061934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 6","termid":"PBO:0061934"}


id: FYPO:0007448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"abnormal macroautophagy during nitrogen starvation","termid":"FYPO:0004670"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000257","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"normal reticulophagy during nitrogen starvation","synonyms":[{"name":"normal ER autophagy during nitrogen starvation","type":"exact"},{"name":"normal ER degradation during nitrogen starvation","type":"related"},{"name":"normal ER-phagy during nitrogen starvation","type":"exact"},{"name":"normal endoplasmic reticulum autophagy during nitrogen starvation","type":"exact"},{"name":"normal reticulophagy during nitrogen depletion","type":"exact"},{"name":"normal reticulophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007448"}


id: PBO:0042112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 184","termid":"PBO:0042112"}


id: GO:0000957
data:
  {"annotated_genes":["SJAG_02383","SJAG_02526","SJAG_01948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90718,91120,114191],"is_not":false,"summary":null,"term":"GO:0000957"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of RNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01948":null,"SJAG_02383":null,"SJAG_02526":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9836573"],"termid":"GO:0000957","terms_by_termid":{"GO:0000957":null}}


id: GO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenylpropanoate + NAD+ = (E)-cinnamate + NADH + H+.","definition_xrefs":["RHEA:50944","PMID:10849007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cinnamate reductase activity","termid":"GO:0043786"}


id: MONDO:0015262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachyolmia is a rare, clinically and genetically heterogeneous group of bone disorders characterized by short trunk, mild short stature, scoliosis and generalized platyspondyly without significant abnormalities in the long bones.","definition_xrefs":["Orphanet:1293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachyolmia","secondary_identifiers":["MESH:C537098","MEDGEN:96584","UMLS:C0432228","ICD9:756.19","GARD:10903","SCTID:254088006","DOID:0050690","icd11.foundation:1255949169"],"synonyms":[{"name":"brachyrachia","type":"exact"}],"termid":"MONDO:0015262","xrefs":{"Monarch":{"xref_id":"0015262"}}}


id: PBO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 pseudogene 1","termid":"PBO:0043994"}


id: GO:0000126
data:
  {"annotated_genes":["SJAG_00421","SJAG_03007","SJAG_03120"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72162,77897,95907],"is_not":false,"summary":null,"term":"GO:0000126"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIB contains the TATA-binding protein (TBP) and two Pol III-specific proteins, B'' and BRF.","definition_xrefs":["GOC:mah","PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03007":null,"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIB complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000126","terms_by_termid":{"GO:0000126":null}}


id: MONDO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of hip abnormalities commonly presenting in infancy involving the relationship between the femoral head and the acetabulum and that includes subluxation or dislocation at rest or upon provocation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"developmental dysplasia of the hip","secondary_identifiers":["MESH:D000082602","UMLS:C4551649","EFO:1000648","OMIMPS:142700","SCTID:52781008","DOID:0060930","ICD9:755.63","MEDGEN:1640560"],"synonyms":[{"name":"congenital acetabular dysplasia","type":"related"},{"name":"congenital dysplasia of the hip","type":"related"},{"name":"congenital hip dysplasia","type":"exact"},{"name":"dysplasia of acetabulum","type":"related"}],"termid":"MONDO:0000158","xrefs":{"Monarch":{"xref_id":"0000158"}}}


id: GO:0002804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"positively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antifungal peptide production","synonyms":[{"name":"activation of antifungal peptide production","type":"narrow"},{"name":"stimulation of antifungal peptide production","type":"narrow"},{"name":"up regulation of antifungal peptide production","type":"exact"},{"name":"up-regulation of antifungal peptide production","type":"exact"},{"name":"upregulation of antifungal peptide production","type":"exact"}],"termid":"GO:0002804"}


id: PBO:0029473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_tapered_vegetative_cell","termid":"PBO:0029473"}


id: MONDO:0007523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome, hypermobility type (HT-EDS) is the most frequent form of EDS, a group of hereditary connective tissue diseases, and is characterized by joint hyperlaxity, mild skin hyperextensibility, tissue fragility and extra-musculoskeletal manifestations.","definition_xrefs":["Orphanet:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, hypermobility type","secondary_identifiers":["NANDO:2201257","OMIM:130020","DOID:14757","NCIT:C125698","MESH:C536196","SCTID:30652003","NANDO:1200647","UMLS:C0268337","MEDGEN:75670","GARD:2081"],"synonyms":[{"name":"EDS 3","type":"related"},{"name":"EDS III","type":"exact"},{"name":"EDS3 (formerly)","type":"related"},{"name":"EDSHMB","type":"exact"},{"name":"Ehlers-Danlos syndrome type 3","type":"exact"},{"name":"Ehlers-Danlos syndrome type 3 (formerly)","type":"exact"},{"name":"Ehlers-Danlos syndrome, hypermobile type","type":"exact"},{"name":"Ehlers-Danlos syndrome, hypermobility type","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 3","type":"exact"},{"name":"Ehlers-Danlos syndrome, type III","type":"exact"},{"name":"HT-EDS","type":"exact"},{"name":"benign hypermobility syndrome","type":"related"},{"name":"hEDS","type":"related"},{"name":"hypermobile EDS","type":"related"},{"name":"hypermobile Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0007523","xrefs":{"Monarch":{"xref_id":"0007523"}}}


id: GO:0035855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow.","definition_xrefs":["CL:0000556","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megakaryocyte development","synonyms":[{"name":"megakaryocyte cell development","type":"exact"}],"termid":"GO:0035855"}


id: GO:0032118
data:
  {"annotated_genes":["SJAG_03073","SJAG_04143","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101754,106908,111535],"is_not":false,"summary":null,"term":"GO:0032118"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the horsetail-astral array, a structure of astral microtubules that emanates from the spindle pole body during meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"dynein-driven meiotic oscillatory nuclear movement","termid":"GO:0030989"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03073":null,"SJAG_04143":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007010","GO:0140013","GO:0006810","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"horsetail-astral microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"horsetail-astral microtubule array organization","type":"exact"},{"name":"horsetail-astral microtubule organisation","type":"exact"},{"name":"horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"GO:0032118","terms_by_termid":{"GO:0032118":null}}


id: PBO:0083505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF BDF2/YDL070W","termid":"PBO:0083505"}


id: MOD:01621
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two or more amino acid residues by forming an adduct with a compound containing a flavin group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin crosslinked residues","termid":"MOD:01621"}


id: PBO:0066055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C pseudogene 1","termid":"PBO:0066055"}


id: GO:0098921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by an endocannabinoid ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by lipid","termid":"GO:0098920"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by endocannabinoid","termid":"GO:0099542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by endocannabinoid","termid":"GO:0098921"}


id: MONDO:1010572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in long-tailed chinchilla.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, long-tailed chinchilla","secondary_identifiers":["OMIA:000279-34839"],"termid":"MONDO:1010572","xrefs":{"Monarch":{"xref_id":"1010572"}}}


id: PBO:0089896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase","termid":"PBO:0089896"}


id: MONDO:0014599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the COL4A3BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 34","secondary_identifiers":["MEDGEN:907277","OMIM:616351","DOID:0070064","UMLS:C4225156"],"synonyms":[{"name":"COL4A3BP autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD34","type":"exact"},{"name":"autosomal dominant intellectual disability 34","type":"exact"},{"name":"autosomal dominant mental retardation 34","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 34","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in COL4A3BP","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant type 34","type":"exact"},{"name":"mental retardation, autosomal dominant 34","type":"related"},{"name":"mental retardation, autosomal dominant type 34","type":"exact"}],"termid":"MONDO:0014599","xrefs":{"Monarch":{"xref_id":"0014599"}}}


id: PBO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 2","termid":"PBO:0080179"}


id: PBO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15b (predicted)","termid":"PBO:0001416"}


id: PBO:0051178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-66","termid":"PBO:0051178"}


id: GO:1990064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the ground tissue.","definition_xrefs":["PMID:23444357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground tissue pattern formation","synonyms":[{"name":"ground tissue patterning","type":"exact"}],"termid":"GO:1990064"}


id: PR:O43063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03572","PANTHER:PTHR11599:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.10c","secondary_identifiers":["UniProtKB:O43063"],"synonyms":[{"name":"Spom972h-PSMB6","type":"exact"}],"termid":"PR:O43063"}


id: GO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.2.2.-"],"termid":"GO:0016622"}


id: MONDO:0014200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant neurodevelopmental condition related to variants in CACNA1D. Most reported variants are de novo and functional studies have indicated a gain-of-function disease mechanism. This condition is characterized by developmental delay/intellectual disability, autism spectrum disorder, hypotonia and seizures. Other reported features include endocrine abnormalities such as primary aldosteronism and congenital hyperinsulinemic hypoglycemia, self-injurious behavior, facial dysmorphisms, and heart defects.","definition_xrefs":["PMID:37122292","PMID:32583268","PMID:23913001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldosterone-producing adenoma with seizures and neurological abnormalities","secondary_identifiers":["MEDGEN:815939","GARD:17591","Orphanet:369929","OMIM:615474","UMLS:C3809609"],"synonyms":[{"name":"APA with seizures and neurological abnormalities","type":"exact"},{"name":"Conn adenoma","type":"related"},{"name":"Conn adenoma with seizures and neurological abnormalities","type":"exact"},{"name":"PASNA","type":"related"},{"name":"aldosterone-secreting adenoma","type":"related"},{"name":"aldosterone-secreting adenoma with seizures and neurological abnormalities","type":"exact"},{"name":"aldosteronoma","type":"related"},{"name":"complex neurodevelopmental disorder with or without aldosteronism","type":"exact"},{"name":"primary aldosteronism due to Conn adenoma","type":"related"},{"name":"primary aldosteronism, seizures, and neurologic abnormalities","type":"exact"}],"termid":"MONDO:0014200","xrefs":{"Monarch":{"xref_id":"0014200"}}}


id: MOD:01411
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a monohydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated leucine","synonyms":[{"name":"Hy1Leu","type":"exact"}],"termid":"MOD:01411"}


id: MONDO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cell type cancer (obsolete MONDO:0000404)","termid":"MONDO:0000404","xrefs":{"Monarch":{"xref_id":"0000404"}}}


id: PBO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 7","termid":"PBO:0060438"}


id: MONDO:0019429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked neurodegenerative disorder characterized by intellectual deficit, blindness, convulsions, spasticity, mild hypomyelination and early death. It has been described in about ten male members from two generations of one family. The genetic defect responsible for the disorder is located in the pericentromeric region of the X chromosome, Xp11.3-q12.","definition_xrefs":["Orphanet:85336"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked neurodegenerative syndrome, Hamel type","secondary_identifiers":["SCTID:718847005","UMLS:C4305135","GARD:19062","MEDGEN:930804"],"termid":"MONDO:0019429","xrefs":{"Monarch":{"xref_id":"0019429"}}}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bhm","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: PBO:0003710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein Ymr1 (predicted)","termid":"PBO:0003710"}


id: PBO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA1 divergent transcript","termid":"PBO:0061268"}


id: PBO:0079355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBA1B antisense RNA 1","termid":"PBO:0079355"}


id: PBO:0061777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCA2 melanosomal transmembrane protein","termid":"PBO:0061777"}


id: PR:P46960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A geranylgeranyl transferase type-2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00626","PANTHER:PTHR11774:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl transferase type-2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.02","secondary_identifiers":["UniProtKB:P46960"],"synonyms":[{"name":"GGTase-II-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RABGGTB","type":"exact"},{"name":"geranylgeranyl transferase type II subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II protein geranyl-geranyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46960"}


id: GO:0009747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hexose and dependent on the detection of hexokinase.","definition_xrefs":["GOC:sm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose mediated signaling","termid":"GO:0009757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hexokinase-dependent signaling","synonyms":[{"name":"hexokinase-dependent signalling","type":"exact"}],"termid":"GO:0009747"}


id: FYPO:0005483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased inositol phosphate phosphatase activity","termid":"FYPO:0005483"}


id: GO:0000993
data:
  {"annotated_genes":["SJAG_04933","SJAG_00139","SJAG_04353","SJAG_00483","SJAG_01610","SJAG_01151","SJAG_03118","SJAG_00448"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71350,72576,76580,78988,78999],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[65300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[72881,78429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal RNA polymerase II transcription machinery binding","termid":"GO:0001099"},{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase II core binding","type":"exact"},{"name":"RNAP II core binding","type":"exact"}],"termid":"GO:0000993","terms_by_termid":{"GO:0000993":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase","termid":"PBO:0061194"}


id: PBO:0064795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1M","termid":"PBO:0064795"}


id: MONDO:0015531
data:
  {"annotated_genes":["SJAG_00570","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[86556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"}]},"cv_name":"mondo","definition":"Group of disorders which feature accumulations of active HISTIOCYTES and LYMPHOCYTES, but where the histiocytes are not LANGERHANS CELLS. The group includes HEMOPHAGOCYTIC LYMPHOHISTIOCYTOSIS; SINUS HISTIOCYTOSIS; xanthogranuloma; reticulohistiocytoma; juvenile XANTHOGRANULOMA; xanthoma disseminatum; as well as the lipid storage diseases (SEA-BLUE HISTIOCYTE SYNDROME; and NIEMANN-PICK DISEASES).","definition_xrefs":["MESH:D015616"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic disease with skin involvement (obsolete MONDO:0017368)","termid":"MONDO:0017368"},{"relation_name":"is_a","term_name":"histiocytosis","termid":"MONDO:0002637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-Langerhans cell histiocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8231","SCTID:127069007","Orphanet:157987","MEDGEN:9265","DOID:4330","ICD9:288.4","UMLS:C0019624"],"synonyms":[{"name":"histiocytosis, non-Langerhans-cell","type":"related"},{"name":"non-Langerhans-cell histiocytosis","type":"exact"}],"termid":"MONDO:0015531","terms_by_termid":{"MONDO:0009756":null,"MONDO:0011871":null,"MONDO:0011873":null},"xrefs":{"Monarch":{"xref_id":"0015531"}}}


id: PBO:0109227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF3 pseudogene 1","termid":"PBO:0109227"}


id: GO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a Cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate mRNA or circRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"cap-independent translational initiation","termid":"GO:0002190"}


id: MONDO:0005732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diphyllobothriasis (obsolete MONDO:0005732)","termid":"MONDO:0005732","xrefs":{"Monarch":{"xref_id":"0005732"}}}


id: MONDO:0021588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sebaceous gland carcinoma affecting the eyelid. It arises from the meibomian glands, glands of Zeis, or glands associated with the caruncle. It usually affects elderly women and is characterized by high rate of local recurrence, regional, and distant metastases.","definition_xrefs":["NCIT:C134831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid carcinoma","termid":"MONDO:0003876"},{"relation_name":"is_a","term_name":"ocular sebaceous carcinoma","termid":"MONDO:0006327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"eyelid sebaceous gland carcinoma","secondary_identifiers":["Orphanet:658590","UMLS:C4525405","MEDGEN:1612781"],"synonyms":[{"name":"carcinoma of sebaceous gland of eyelid","type":"exact"},{"name":"eyelid SGC","type":"exact"},{"name":"eyelid sebaceous gland carcinoma","type":"exact"},{"name":"sebaceous gland carcinoma of the eyelid","type":"exact"},{"name":"sebaceous gland of eyelid carcinoma","type":"exact"}],"termid":"MONDO:0021588","xrefs":{"Monarch":{"xref_id":"0021588"}}}


id: MONDO:1010277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orchitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orchitis, non-human animal","secondary_identifiers":["OMIA:000745"],"termid":"MONDO:1010277","xrefs":{"Monarch":{"xref_id":"1010277"}}}


id: PBO:0029853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5,_H4-K8,_H4-K12_and_H4-K16_acetylation_at_centromere_outer_repeat","termid":"PBO:0029853"}


id: PBO:0085210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding  phosphatidylserine transferase; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; GFP-fusion protein localizes to the cell periphery; overexpression extends lifespan by promoting vacuolar fusion; OSH6 has a paralog, OSH7, that arose from the whole genome duplication","termid":"PBO:0085210"}


id: FYPO:0000101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpropham. Cells stop growing (and may die) at a concentration of chlorpropham that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to chlorpropham","synonyms":[{"name":"hypersensitive to chlorpropham","type":"exact"},{"name":"sensitive to chlorpropham during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpropham during vegetative growth","type":"exact"},{"name":"sensitive to isopropyl N-3-chlorophenyl carbamate","type":"exact"},{"name":"sensitive to spindle poison","type":"broad"}],"termid":"FYPO:0000101"}


id: PBO:0078564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49D1","termid":"PBO:0078564"}


id: PBO:0042168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 scaffold protein","termid":"PBO:0042168"}


id: PBO:0056055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated transcript 1","termid":"PBO:0056055"}


id: FYPO:0009034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethylenediaminetetraacetic acid than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to ethylenediaminetetraacetic acid","synonyms":[{"name":"resistance to ethylenediaminetetraacetic acid during mitotic cell cycle","type":"related"},{"name":"resistance to ethylenediaminetetraacetic acid during vegetative growth","type":"exact"},{"name":"resistant to ethylenediaminetetraacetic acid","type":"exact"}],"termid":"FYPO:0009034"}


id: GO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphthalate + H+ = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["EC:4.1.1.69","RHEA:18601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3,4-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1447","GO:0034913","KEGG_REACTION:R01634","MetaCyc:34-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"3,4-dihydroxyphthalate 2-decarboxylase activity","type":"exact"},{"name":"3,4-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"3,4-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0047556"}


id: PBO:0057368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-2","termid":"PBO:0057368"}


id: FYPO:0003072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of primary amine oxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal primary amine oxidase activity","synonyms":[{"name":"decreased copper amine oxidase activity","type":"narrow"}],"termid":"FYPO:0003072"}


id: FYECO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for more than 48 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth >48 hrs","synonyms":[{"name":"growth >48 hours","type":"exact"}],"termid":"FYECO:0000237"}


id: GO:0043461
data:
  {"annotated_genes":["SJAG_04899","SJAG_01503","SJAG_07008","SJAG_04450","SJAG_06135","SJAG_01838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73852,78453,110454,74493,110033,89385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes.","definition_xrefs":["GOC:mah","GOC:jl","PMID:29514954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04450":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"F-type ATPase complex assembly","type":"exact"}],"termid":"GO:0043461","terms_by_termid":{"GO:0033615":null}}


id: PBO:0090801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Spo14","termid":"PBO:0090801"}


id: GO:0098634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the extracellular matrix.","definition_xrefs":["Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0098631","GO:0005488"],"is_obsolete":false,"name":"cell-matrix adhesion mediator activity","synonyms":[{"name":"cell-matrix adhesion molecule","type":"exact"},{"name":"protein binding involved in cell-matrix adhesion","type":"exact"}],"termid":"GO:0098634"}


id: PBO:0041686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide alpha","termid":"PBO:0041686"}


id: MONDO:0001880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glossitis","termid":"MONDO:0006771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"median rhomboid glossitis","secondary_identifiers":["ICD10CM:K14.2","icd11.foundation:598142773","MEDGEN:510155","UMLS:C0155963","DOID:14111","ICD9:529.2","SCTID:7522008","ICD9:750.19"],"synonyms":[{"name":"persistent tuberculum impar","type":"exact"}],"termid":"MONDO:0001880","xrefs":{"Monarch":{"xref_id":"0001880"}}}


id: PBO:0054882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2296","termid":"PBO:0054882"}


id: PBO:0082054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease; component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p; the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs","termid":"PBO:0082054"}


id: PBO:0046339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 4","termid":"PBO:0046339"}


id: PBO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 5","termid":"PBO:0044654"}


id: GO:0003723
data:
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id: FYPO:0004925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the outer surface of the ascospore wall is rougher and less regular than normal.","definition_xrefs":["PomBase:mah","PMID:20410137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall morphology","termid":"FYPO:0003138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002946","FYPO:0001985","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"irregular ascospore wall","synonyms":[{"name":"irregular ascospore wall surface texture","type":"exact"},{"name":"irregular spore wall","type":"exact"},{"name":"rough ascospore wall","type":"exact"}],"termid":"FYPO:0004925"}


id: PBO:0005480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,4-glucan synthase Ags1","termid":"PBO:0005480"}


id: GO:0030491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules.","definition_xrefs":["PMID:10357855","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"heteroduplex formation","termid":"GO:0030491"}


id: GO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that stops, prevents, or reduces the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function, epigenetic (obsolete GO:0045857)","synonyms":[{"name":"down regulation of protein activity, epigenetic","type":"exact"},{"name":"down-regulation of protein activity, epigenetic","type":"exact"},{"name":"downregulation of protein activity, epigenetic","type":"exact"},{"name":"inhibition of protein activity, epigenetic","type":"narrow"},{"name":"negative regulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045857"}


id: PBO:0060017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 5","termid":"PBO:0060017"}


id: SO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone that is invalid.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated","termid":"SO:0000790"},{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_cDNA_clone","synonyms":[{"name":"invalidated cDNA clone","type":"exact"}],"termid":"SO:0000809"}


id: PBO:0034567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_meiotic_cell_cycle","termid":"PBO:0034567"}


id: MONDO:0004842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the oral mucosa due to local or systemic factors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"},{"relation_name":"is_a","term_name":"mouth mucosa disorder","termid":"MONDO:0044992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatitis","secondary_identifiers":["ICD9:528.0","ICD9:528.00","NCIT:C26887","UMLS:C0038362","DOID:9637","SCTID:61170000","EFO:0009688","MEDGEN:52511","MESH:D013280"],"synonyms":[{"name":"inflammation of mouth mucosa","type":"exact"},{"name":"mouth mucosa inflammation","type":"exact"},{"name":"mucositis oral","type":"exact"},{"name":"oral mucositis","type":"exact"}],"termid":"MONDO:0004842","xrefs":{"Monarch":{"xref_id":"0004842"}}}


id: PBO:0082555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centrin (Cdc31p)-binding protein required for SPB duplication; localizes to the half-bridge of the spindle pole body (SPB); required for progression through G(2)-M transition; phosphorylated by Cdc28p-Clb2p and by Cdc5p; dephosphorylated by Cdc14p; has similarity to Xenopus laevis XCAP-C","termid":"PBO:0082555"}


id: PBO:0056623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED4 antisense RNA 1","termid":"PBO:0056623"}


id: GO:0036398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-protein complex containing at least the T-cell receptor complex and the LAT (linker for activation of T cells) scaffold protein. Also contains a variety of signaling proteins including co-receptors, kinases, phosphatases and adaptors such as CD8. Connects events on the plasma membrane to distal signaling cascades to ultimately modulate T cell biology.","definition_xrefs":["PMID:22426112","PMID:17534068","GOC:krc","PMID:20107804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TCR signalosome","synonyms":[{"name":"LAT signalosome","type":"exact"},{"name":"linker for activation of T cells signalosome","type":"exact"}],"termid":"GO:0036398"}


id: PBO:0046035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 3","termid":"PBO:0046035"}


id: MONDO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart disease in which the cause of the disease is a mutation in the GATA4 gene.","definition_xrefs":["PMID:28991257","MONDO:patterns/disease_series_by_gene","PMID:15810002","PMID:18672102","PMID:22101736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"structural congenital heart disease, multiple types - GATA4","termid":"MONDO:0100009","xrefs":{"Monarch":{"xref_id":"0100009"}}}


id: PBO:0066223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM26 antisense RNA 1","termid":"PBO:0066223"}


id: GO:0000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process via Ehrlich pathway","termid":"GO:0000955"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"}


id: SO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operon whose transcription is coordinated on several mutually overlapping transcription units transcribed in the same direction and sharing at least one gene.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"operon","termid":"SO:0000178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_operon","synonyms":[{"name":"complex operon","type":"exact"}],"termid":"SO:0002299"}


id: PBO:0074177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 4","termid":"PBO:0074177"}


id: GO:0097706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to oscillatory fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","PMID:21768538","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to oscillatory fluid shear stress","termid":"GO:0097704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to oscillatory fluid shear stress","secondary_identifiers":["Reactome:R-HSA-9860927"],"synonyms":[{"name":"blood vessel endothelial cell response to oscillatory fluid shear stress","type":"exact"}],"termid":"GO:0097706"}


id: PBO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell","termid":"PBO:0030367"}


id: PBO:0047373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 4","termid":"PBO:0047373"}


id: PBO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 17","termid":"PBO:0050315"}


id: GO:0017156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, induced by a rise in cytosolic calcium-ion levels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"calcium-ion regulated exocytosis","synonyms":[{"name":"calcium ion-dependent exocytosis","type":"exact"}],"termid":"GO:0017156"}


id: PBO:0081052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 10","termid":"PBO:0081052"}


id: GO:1901838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription of nuclear large rRNA mediated by RNA polymerase I.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase I","termid":"GO:0045943"},{"relation_name":"is_a","term_name":"regulation of transcription of nucleolar large rRNA by RNA polymerase I","termid":"GO:1901836"},{"relation_name":"positively_regulates","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription of nucleolar large rRNA by RNA polymerase I","synonyms":[{"name":"activation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"narrow"},{"name":"activation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"positive regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"up regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"up regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"up-regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"up-regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"upregulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"upregulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"}],"termid":"GO:1901838"}


id: SO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U5_LTR_region","termid":"SO:0000422"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_five_prime_LTR_region","synonyms":[{"name":"U5 5' long terminal repeat region","type":"exact"},{"name":"U5 five prime LTR region","type":"exact"}],"termid":"SO:0000428"}


id: PBO:0065080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase 2B, pseudogene","termid":"PBO:0065080"}


id: PBO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit (predicted)","termid":"PBO:0001227"}


id: PBO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 1","termid":"PBO:0043922"}


id: GO:2000750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000770"},{"relation_name":"negatively_regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"negative regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000750"}


id: PBO:0067730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 28","termid":"PBO:0067730"}


id: GO:0008230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex containing the products of the insect genes Ecdysone receptor (EcR) and ultraspiracle (usp). Binding of ecdysone promotes association between the two subunits, and the receptor complex then initiates molting and metamorphosis by binding DNA and regulating the transcription of target genes.","definition_xrefs":["PMID:14592980","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ecdysone receptor holocomplex","termid":"GO:0008230"}


id: MONDO:0006030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent infections of the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic cystitis","secondary_identifiers":["DOID:1680","EFO:1000023","MEDGEN:65146","NCIT:C27008","SCTID:33655002","UMLS:C0221763","ICD9:595.2"],"synonyms":[{"name":"cystitis, chronic","type":"exact"}],"termid":"MONDO:0006030","xrefs":{"Monarch":{"xref_id":"0006030"}}}


id: GO:0031987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion involved in locomotory behavior","synonyms":[{"name":"locomotion during locomotory behaviour","type":"exact"}],"termid":"GO:0031987"}


id: GO:0018681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 deisopropylatrazine + O2 = 2 acetaldehyde + 2 deisopropyldeethylatrazine.","definition_xrefs":["KEGG_REACTION:R05567"],"gene_count":0,"genotype_count":0,"name":"obsolete deisopropylatrazine monooxygenase activity (obsolete GO:0018681)","termid":"GO:0018681"}


id: GO:0043723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one + H2O = 5-amino-6-(5-phospho-D-ribosylamino)uracil + ammonia.","definition_xrefs":["PMID:11889103","MetaCyc:RXN-10058"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase activity (obsolete GO:0043723)","synonyms":[{"name":"2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase activity","type":"exact"},{"name":"DRAP deaminase activity","type":"exact"}],"termid":"GO:0043723"}


id: GO:0045728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases, that occurs in neutrophils, monocytes, and macrophages shortly after phagocytosing material. An enhanced uptake of oxygen leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, which play a part in microbiocidal activity.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory burst involved in defense response","termid":"GO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst after phagocytosis","synonyms":[{"name":"metabolic burst after phagocytosis","type":"exact"},{"name":"oxidative burst after phagocytosis","type":"exact"}],"termid":"GO:0045728"}


id: PBO:0072129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 6","termid":"PBO:0072129"}


id: GO:0070561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by vitamin D binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12637589","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"},{"relation_name":"part_of","term_name":"cellular response to vitamin D","termid":"GO:0071305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vitamin D receptor signaling pathway","synonyms":[{"name":"VDR signaling pathway","type":"exact"},{"name":"calcitriol signaling pathway","type":"narrow"},{"name":"intracellular vitamin D receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated vitamin D signaling pathway","type":"exact"},{"name":"vitamin D receptor signalling pathway","type":"exact"}],"termid":"GO:0070561"}


id: GO:2000596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"negatively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optic nerve formation","synonyms":[{"name":"negative regulation of CN II biosynthesis","type":"related"},{"name":"negative regulation of CN II formation","type":"related"}],"termid":"GO:2000596"}


id: PBO:0067557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 709, pseudogene","termid":"PBO:0067557"}


id: PBO:0044971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 8","termid":"PBO:0044971"}


id: PBO:0079268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC39A antisense RNA 1","termid":"PBO:0079268"}


id: PBO:0052313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0825","termid":"PBO:0052313"}


id: PBO:0046343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 1","termid":"PBO:0046343"}


id: PBO:0017074
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA substrate Km 20 nM, Vmax 1.1-2.5 nM/min","termid":"PBO:0017074"}


id: GO:0060480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung goblet cell. A goblet cell is a cell of the epithelial lining that produces and secretes mucins.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"},{"relation_name":"part_of","term_name":"lobar bronchus epithelium development","termid":"GO:0060481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung goblet cell differentiation","synonyms":[{"name":"pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:0060480"}


id: GO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRK receptor activity (obsolete GO:0005013)","synonyms":[{"name":"neurotrophin TRK receptor activity","type":"exact"}],"termid":"GO:0005013"}


id: GO:0048709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system.","definition_xrefs":["PMID:15139015","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte differentiation","termid":"GO:0048709"}


id: GO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte migration.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte migration","synonyms":[{"name":"down regulation of leukocyte migration","type":"exact"},{"name":"down-regulation of leukocyte migration","type":"exact"},{"name":"downregulation of leukocyte migration","type":"exact"},{"name":"inhibition of leukocyte migration","type":"narrow"},{"name":"negative regulation of immune cell migration","type":"exact"},{"name":"negative regulation of leucocyte migration","type":"exact"}],"termid":"GO:0002686"}


id: GO:0022407
data:
  {"annotated_genes":["SJAG_01778","SJAG_00926","SJAG_00910","SJAG_00156","SJAG_04191","SJAG_02380","SJAG_03484","SJAG_01253","SJAG_03473","SJAG_03802"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98902,99619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022408"},{"annotations":[106573,103871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060257"},{"annotations":[108949,106221,109072,111682,114390,116445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to another cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022407","terms_by_termid":{"GO:0022408":null,"GO:0060257":null,"GO:1900735":null}}


id: MONDO:0010348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 9","secondary_identifiers":["UMLS:C1845296","OMIM:300509","MEDGEN:375623"],"synonyms":[{"name":"DYX9","type":"exact"},{"name":"dyslexia, susceptibility to, 9","type":"exact"}],"termid":"MONDO:0010348","xrefs":{"Monarch":{"xref_id":"0010348"}}}


id: PBO:0081856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 789","termid":"PBO:0081856"}


id: GO:0035204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellocyte differentiation","synonyms":[{"name":"down regulation of lamellocyte differentiation","type":"exact"},{"name":"down-regulation of lamellocyte differentiation","type":"exact"},{"name":"downregulation of lamellocyte differentiation","type":"exact"},{"name":"inhibition of lamellocyte differentiation","type":"narrow"}],"termid":"GO:0035204"}


id: PBO:0057665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1256","termid":"PBO:0057665"}


id: GO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to paxillin and the FAK-related kinase Pyk2.","definition_xrefs":["PMID:11683411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-paxillin-Pyk2 complex","synonyms":[{"name":"ITGAV-ITGB3-PXN-PTK2b complex","type":"narrow"}],"termid":"GO:0071097"}


id: PR:Q10248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.20c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G9.20c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.20c","synonyms":[{"name":"Spom972h-SPAC4G9.20c","type":"exact"}],"termid":"PR:Q10248"}


id: MONDO:0006333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian dysgerminoma (obsolete MONDO:0006333)","termid":"MONDO:0006333","xrefs":{"Monarch":{"xref_id":"0006333"}}}


id: GO:0071356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor necrosis factor","termid":"GO:0034612"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor necrosis factor","synonyms":[{"name":"cellular response to TNF","type":"exact"}],"termid":"GO:0071356"}


id: PBO:0030748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell","termid":"PBO:0030748"}


id: PBO:0030098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_vegetative_growth","termid":"PBO:0030098"}


id: SO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region recognized by a recombinase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_signal_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_Signal_Sequences"],"synonyms":[{"name":"recombination signal sequence","type":"related"}],"termid":"SO:0001532"}


id: PR:O94287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized chloride channel protein C887.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.02","synonyms":[{"name":"Spom972h-SPBC887.02","type":"exact"}],"termid":"PR:O94287"}


id: PBO:0028852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_UV","termid":"PBO:0028852"}


id: PBO:0045121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C1B","termid":"PBO:0045121"}


id: PBO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 3","termid":"PBO:0050912"}


id: GO:0032326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor catabolic process","synonyms":[{"name":"Mo-molybdopterin cofactor breakdown","type":"exact"},{"name":"Mo-molybdopterin cofactor catabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor degradation","type":"exact"},{"name":"Moco catabolic process","type":"broad"},{"name":"Moco catabolism","type":"broad"}],"termid":"GO:0032326"}


id: PBO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 3","termid":"PBO:0071380"}


id: MONDO:0013911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the NSMF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 9 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","DOID:0090085","MEDGEN:766756","UMLS:C3553842","GARD:15850","OMIM:614838"],"synonyms":[{"name":"HH9","type":"related"},{"name":"NSMF hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 9 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in NSMF","type":"exact"}],"termid":"MONDO:0013911","xrefs":{"Monarch":{"xref_id":"0013911"}}}


id: PBO:0049099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 156","termid":"PBO:0049099"}


id: PBO:0039344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALX homeobox 4","termid":"PBO:0039344"}


id: MONDO:0012330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Talo-patello-scaphoid osteolysis is an extremely rare form of primary osteolysis, described in two sisters to date, characterized by bilateral osteolysis of the tali, scaphoids, and patellae (accompanied by periarticular swelling and pain) and short fourth metacarpals (brachydactyly type E), in the absence of renal disease. Autosomal recessive inheritance has been suggested.","definition_xrefs":["Orphanet:50809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talo-patello-scaphoid osteolysis","secondary_identifiers":["MESH:C536894","MEDGEN:400611","UMLS:C1864784","OMIM:609655","icd11.foundation:1276091756","GARD:10061"],"synonyms":[{"name":"singh-Williams-McAlister syndrome","type":"exact"},{"name":"talo-patello-scaphoid osteolysis, synovitis, and short fourth metacarpals","type":"related"}],"termid":"MONDO:0012330","xrefs":{"Monarch":{"xref_id":"0012330"}}}


id: PBO:0027576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_endoplasmic_reticulum","termid":"PBO:0027576"}


id: GO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted glutamate transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted glutamate transport vesicle","termid":"GO:0060199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle lumen","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle lumen","type":"exact"}],"termid":"GO:0060204"}


id: PR:O42634
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein DMC1/LIM15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein dmc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.03c","secondary_identifiers":["UniProtKB:O42634"],"synonyms":[{"name":"Spom972h-DMC1","type":"exact"}],"termid":"PR:O42634"}


id: GO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains a diploid copy of the cell's complete genome. Sections of contiguous sequence in the macronucleus are often interrupted by internal eliminated sequences (IES), and may be permuted, in micronuclei. Genic transcription is not found in micronuclei. Some ciliate species may contain multiple micronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"micronucleus","secondary_identifiers":["Wikipedia:Micronucleus"],"termid":"GO:0031040"}


id: PR:P87053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat-containing protein pof1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.05c","synonyms":[{"name":"Spom972h-pof1","type":"exact"},{"name":"skp1-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87053"}


id: GO:0048721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the clypeus are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"clypeus development","termid":"GO:0048723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus morphogenesis","termid":"GO:0048721"}


id: GO:0048892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line nerve over time, form its formation to the mature structure. Lateral line nerves project primarily to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve development","synonyms":[{"name":"nLL development","type":"exact"}],"termid":"GO:0048892"}


id: PBO:0046135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A","termid":"PBO:0046135"}


id: PBO:0050242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 20","termid":"PBO:0050242"}


id: GO:0046617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of nucleolar expansion, as seen in Saccharomyces.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar size increase (sensu Saccharomyces) (obsolete GO:0046617)","synonyms":[{"name":"nucleolar size increase (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046617"}


id: GO:0033769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin II or glyceollin III + NADP+ + 2 H2O, and 4-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin I + NADP+ + 2 H2O.","definition_xrefs":["EC:1.14.14.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyceollin synthase activity","synonyms":[{"name":"dimethylallyl-3,6a,9-trihydroxypterocarpan cyclase activity","type":"exact"}],"termid":"GO:0033769"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: GO:0044363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism effects a change in the frequency, rate or extent of the activity of a potassium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of potassium channel activity in another organism (obsolete GO:0044363)","synonyms":[{"name":"modulation of potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044363"}


id: MOD:00487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:115#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxProBiotin","type":"related"},{"name":"Oxidized Proline biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00487"}


id: PBO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"destrin, actin depolymerizing factor","termid":"PBO:0045508"}


id: MONDO:0017051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic maple syrup urine disease (classic MSUD) is the most severe and probably common form of MSUD characterized by a maple syrup odor in the cerumen at birth, poor feeding, lethargy and focal dystonia, followed by progressive encephalopathy and central respiratory failure if untreated.","definition_xrefs":["Orphanet:268145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"classic maple syrup urine disease","secondary_identifiers":["GARD:17263","NANDO:2201078","MEDGEN:78689","UMLS:C0268568"],"synonyms":[{"name":"classic BCKD deficiency","type":"exact"},{"name":"classic MSUD","type":"exact"},{"name":"classic branched-chain 2-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"classic branched-chain alpha-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"classic branched-chain ketoaciduria","type":"exact"},{"name":"classic maple syrup urine disease","type":"exact"}],"termid":"MONDO:0017051","xrefs":{"Monarch":{"xref_id":"0017051"}}}


id: MOD:00732
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a xylose sugar group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosylated residue","termid":"MOD:00729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"xylosylated","synonyms":[{"name":"Xyl","type":"exact"}],"termid":"MOD:00732"}


id: PBO:0071325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 1","termid":"PBO:0071325"}


id: PBO:0045581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 3","termid":"PBO:0045581"}


id: GO:0060946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell of the heart. Blood vessel endothelial cells are thin flattened cells that line the inside surfaces of blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac blood vessel endothelial cell differentiation","termid":"GO:0060946"}


id: GO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete microsome (obsolete GO:0005792)","secondary_identifiers":["Wikipedia:Microsome"],"synonyms":[{"name":"microsomal membrane","type":"related"},{"name":"microsome","type":"exact"}],"termid":"GO:0005792"}


id: MONDO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cessation of menstruation before the age of 40. Symptoms include hot flashes, night sweats, mood swings, and decreased sex drive.","definition_xrefs":["NCIT:C80099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian failure","termid":"MONDO:0005387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature menopause","secondary_identifiers":["EFO:0009005","MESH:D008594","UMLS:C0025322","DOID:10787","MEDGEN:9963","ICD9:256.31","ICD9:256.39","SCTID:237788002"],"synonyms":[{"name":"POF","type":"exact"},{"name":"early menopause","type":"exact"},{"name":"menopause - premature","type":"exact"},{"name":"menopause praecox","type":"exact"},{"name":"premature menopause","type":"exact"},{"name":"premature ovarian failure","type":"exact"}],"termid":"MONDO:0001119","xrefs":{"Monarch":{"xref_id":"0001119"}}}


id: MONDO:1012695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the PRKG2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, PRKG2-related, cattle","secondary_identifiers":["OMIA:001485-9913"],"termid":"MONDO:1012695","xrefs":{"Monarch":{"xref_id":"1012695"}}}


id: GO:0070242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a thymocyte, an immature T cell located in the thymus.","definition_xrefs":["ISBN:0781765196","GOC:mtg_apoptosis","CL:0000893","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymocyte apoptotic process","synonyms":[{"name":"immature T cell apoptosis","type":"related"},{"name":"thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070242"}


id: PBO:0005443
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.6","termid":"PBO:0005443"}


id: PBO:0054314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1706","termid":"PBO:0054314"}


id: GO:1904118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["PMID:25677106","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"}


id: PBO:0059919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 5","termid":"PBO:0059919"}


id: MONDO:0018349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MAN1B1-CDG is a form of congenital disorders of N-linked glycosylation characterized by intellectual disability, delayed motor development, hypotonia and truncal obesity. Additional features include slight facial dysmorphism (hypertelorism, downslanting palpebral fissures, large, low-set ears, hypoplastic nasolabial fold, thin upper lip), hypermobility of the joints and skin laxity. The disease is caused by mutations in the gene MAN1B1 (9q34.3).","definition_xrefs":["Orphanet:397941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"MAN1B1-congenital disorder of glycosylation","secondary_identifiers":["MEDGEN:1375785","GARD:12417","SCTID:733450008","UMLS:C4518783"],"synonyms":[{"name":"MAN1B1-CDG","type":"exact"},{"name":"MAN1B1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type II due to MAN1B1 deficiency","type":"exact"},{"name":"congenital disorder of glycosylation type 2 due to MAN1B1 deficiency","type":"exact"},{"name":"congenital disorder of glycosylation type II due to MAN1B1 deficiency","type":"exact"},{"name":"intellectual disability-truncal obesity syndrome","type":"exact"}],"termid":"MONDO:0018349","xrefs":{"Monarch":{"xref_id":"0018349"}}}


id: MONDO:0100175
data:
  {"annotated_genes":["SJAG_00185"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009709"}]},"cv_name":"mondo","definition":"A disorder of the musculoskeletal system caused by pathogenic variants in the TTN gene encoding the titin protein expressed in striated muscle. These variants are associated with a variety of overlapping congenital and adult-onset myopathies characterized by non-progressive or progressive neck, axial, and limb weakness, joint contractures, early-onset respiratory insufficiency, facial weakness, congenital cardiac anomalies and/or early-onset dilated cardiomyopathy. Histologic findings on skeletal muscle biopsy reveal a wide range of structural abnormalities and can include increased internalized and central nuclei, minicores, and dystrophic changes.","definition_xrefs":["PMID:27854229","PMID:29691892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of titin","termid":"MONDO:0016191"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"TTN-related myopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TTN myopathy","type":"exact"},{"name":"congenital myopathy related to TTN","type":"exact"}],"termid":"MONDO:0100175","terms_by_termid":{"MONDO:0009709":null},"xrefs":{"Monarch":{"xref_id":"0100175"}}}


id: PBO:0062032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 1","termid":"PBO:0062032"}


id: PBO:0088647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex WD repeat subunit Raf1/Dos1","termid":"PBO:0088647"}


id: FYPO:0004859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cell wall polysaccharide level","synonyms":[{"name":"increased cell wall polysaccharide accumulation","type":"related"},{"name":"increased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"increased cell wall polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0004859"}


id: PBO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMC3 antisense RNA 1","termid":"PBO:0046265"}


id: MONDO:0017131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary cardiac anomaly (obsolete MONDO:0017131)","secondary_identifiers":["Orphanet:271853"],"synonyms":[{"name":"genetic cardiac anomaly","type":"exact"}],"termid":"MONDO:0017131","xrefs":{"Monarch":{"xref_id":"0017131"}}}


id: MONDO:0020757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by an aura that includes motor weakness and the absence of family history.","definition_xrefs":["NCIT:C117011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial or sporadic hemiplegic migraine","termid":"MONDO:0018925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic hemiplegic migraine","secondary_identifiers":["icd11.foundation:1303340532","MEDGEN:318737","UMLS:C1832903"],"synonyms":[{"name":"sporadic hemiplegic migraine","type":"exact"}],"termid":"MONDO:0020757","xrefs":{"Monarch":{"xref_id":"0020757"}}}


id: PBO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein Mba1 (predicted)","termid":"PBO:0017644"}


id: PBO:0061141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 4","termid":"PBO:0061141"}


id: PBO:0012836
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens KRAS","termid":"PBO:0012836"}


id: PBO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (TBP)","termid":"PBO:0002510"}


id: PBO:0031250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_crossover","termid":"PBO:0031250"}


id: FYPO:0002047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show decreased sensitivity to heat shock, when the cell is also subject to nitrogen starvation. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to heat shock","termid":"FYPO:0002045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to heat shock during nitrogen starvation","synonyms":[{"name":"increased cell population growth during cellular response to heat shock during nitrogen starvation","type":"exact"},{"name":"increased growth during cellular response to heat shock during nitrogen starvation","type":"exact"},{"name":"resistance to heat shock during nitrogen depletion","type":"exact"},{"name":"resistance to heat shock during nitrogen deprivation","type":"exact"},{"name":"resistant to heat shock during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002047"}


id: GO:0102648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-fructose 6-phosphate + D-ribose 5-phosphate = D-glycero-D-altro-octulose 8-phosphate + D-glyceraldehyde 3-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-ribose 5-phosphate:D-fructose 6-phosphate transaldolase activity (obsolete GO:0102648)","termid":"GO:0102648"}


id: MONDO:0020763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Menke-Hennekam syndrome","termid":"MONDO:0020774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menke-Hennekam syndrome 1","secondary_identifiers":["MEDGEN:1675629","OMIM:618332","UMLS:C5193034"],"synonyms":[{"name":"MKHK1","type":"related"},{"name":"Menke-Hennekam syndrome 1","type":"exact"}],"termid":"MONDO:0020763","xrefs":{"Monarch":{"xref_id":"0020763"}}}


id: PBO:0076279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 2 like","termid":"PBO:0076279"}


id: GO:0030698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from 5,10-methylenetetrahydrofolate to the C5 atom of the uridine residue at position 54 in a tRNA molecule. This occurs in most Gram-positive bacteria and some Gram-negative bacteria.","definition_xrefs":["GOC:hjd","ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity (obsolete GO:0030698)","synonyms":[{"name":"RUMT","type":"broad"}],"termid":"GO:0030698"}


id: PR:Q9P7X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP23A10.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein P23A10.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.11c","synonyms":[{"name":"Spom972h-SPBP23A10.11c","type":"exact"}],"termid":"PR:Q9P7X4"}


id: PBO:0081970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 divergent transcript","termid":"PBO:0081970"}


id: GO:1900759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of D-amino-acid oxidase activity (obsolete GO:1900759)","synonyms":[{"name":"activation of D-amino-acid oxidase activity","type":"narrow"},{"name":"activation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"activation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"activation of new yellow enzyme","type":"related"},{"name":"positive regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"positive regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"positive regulation of new yellow enzyme","type":"related"},{"name":"up regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up regulation of new yellow enzyme","type":"related"},{"name":"up-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up-regulation of new yellow enzyme","type":"related"},{"name":"upregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"upregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"upregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"upregulation of new yellow enzyme","type":"related"}],"termid":"GO:1900759"}


id: PATO:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000000 pato (obsolete PATO:0000000)","termid":"PATO:0000000"}


id: PR:P87317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31F10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.16","synonyms":[{"name":"Spom972h-SPBC31F10.16","type":"exact"}],"termid":"PR:P87317"}


id: PR:Q9USV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor cbp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.14","synonyms":[{"name":"Spom972h-SPBC27B12.14","type":"exact"},{"name":"cytochrome b mRNA-processing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV6"}


id: GO:0006766
data:
  {"annotated_genes":["SJAG_00707","SJAG_02360","SJAG_01742","SJAG_03275","SJAG_01198","SJAG_00283","SJAG_04156","SJAG_03538","SJAG_02047","SJAG_02420","SJAG_02225","SJAG_00815","SJAG_04866","SJAG_00252","SJAG_00691","SJAG_01383","SJAG_01054","SJAG_00827","SJAG_05230","SJAG_03362","SJAG_04711","SJAG_02406","SJAG_00376","SJAG_04845","SJAG_00673","SJAG_02421","SJAG_02491","SJAG_02408","SJAG_01881","SJAG_00491","SJAG_00480","SJAG_05200","SJAG_01126","SJAG_00381","SJAG_00106","SJAG_01970","SJAG_01543","SJAG_01935","SJAG_01139","SJAG_04282","SJAG_03679","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[117349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[79703,76721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[105108,108661,60679,69311,112722,106406,57103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[71344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[72735,77852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[89378,113990],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[78497,75575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[75842,64257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[112135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[88067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[64255,75845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[78756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[79068,66120,71622,76792,60241,78295,117472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[73046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006771"},{"annotations":[61723,74373,78777,74294,77507,70518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[113896,66000,67674,78584,113902,116323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[66343,59043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[99852,110759,110760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[101192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[72760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamins. 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id: PBO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation_during_anaphase_B","termid":"PBO:0032696"}


id: PBO:0074842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 35A","termid":"PBO:0074842"}


id: PR:Q9UTN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.03","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc14","type":"exact"},{"name":"ubiquitin carrier protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTN8"}


id: MONDO:0021248
data:
  {"annotated_genes":["SJAG_03163","SJAG_00579","SJAG_01895","SJAG_03131","SJAG_01671","SJAG_03677","SJAG_00260","SJAG_04213","SJAG_03576","SJAG_02398","SJAG_03429","SJAG_03453","SJAG_05313","SJAG_03920","SJAG_01111","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87644,87645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011789"},{"annotations":[86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"},{"annotations":[85819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[86199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"},{"annotations":[87678,87679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[87663,87664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00579":null,"SJAG_01111":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03131":null,"SJAG_03163":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03576":null,"SJAG_03677":null,"SJAG_03920":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"nervous system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3268","MEDGEN:45046","UMLS:C0027766"],"synonyms":[{"name":"neoplasm of nervous system","type":"exact"},{"name":"neoplasm of the nervous system","type":"exact"},{"name":"nervous system neoplasm (disease)","type":"exact"},{"name":"nervous system neoplasms","type":"exact"},{"name":"nervous system tumor","type":"exact"},{"name":"nervous system tumour","type":"exact"},{"name":"tumor of nervous system","type":"exact"},{"name":"tumor of the nervous system","type":"exact"},{"name":"tumour of nervous system","type":"exact"},{"name":"tumour of the nervous system","type":"exact"}],"termid":"MONDO:0021248","terms_by_termid":{"MONDO:0007273":null,"MONDO:0007959":null,"MONDO:0008097":null,"MONDO:0008192":null,"MONDO:0009050":null,"MONDO:0009578":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0011789":null,"MONDO:0013224":null,"MONDO:0013602":null,"MONDO:0014937":null,"MONDO:0024517":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0021248"}}}


id: MONDO:0010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atkin-Flaitz syndrome is characterized by moderate to severe intellectual deficit, short stature, macrocephaly, and characteristic facies. It has been described in 11 males and three females from three successive generations of the same family. The males also presented with postpubertal macroorchidism. Transmission is X-linked.","definition_xrefs":["Orphanet:1193"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atkin-Flaitz syndrome","secondary_identifiers":["MEDGEN:163230","UMLS:C0796206","OMIM:300431","GARD:3537","SCTID:718577005"],"synonyms":[{"name":"Atkin syndrome","type":"related"},{"name":"Atkin-Flaitz syndrome","type":"exact"},{"name":"X-linked intellectual disability, Atkin type","type":"exact"}],"termid":"MONDO:0010323","xrefs":{"Monarch":{"xref_id":"0010323"}}}


id: GO:0033169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 9 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 demethylation (obsolete GO:0033169)","termid":"GO:0033169"}


id: PBO:0048807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 1 like","termid":"PBO:0048807"}


id: PBO:0077319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 54","termid":"PBO:0077319"}


id: MONDO:1011263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia, non-human animal","termid":"MONDO:1010337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopia, dog","secondary_identifiers":["OMIA:001487-9615"],"termid":"MONDO:1011263","xrefs":{"Monarch":{"xref_id":"1011263"}}}


id: MONDO:0019439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary amyloidosis is a form of amyloidosis, that complicates chronic inflammatory disorders (mainly rheumatoid arthritis) and is characterized by the aggregation and deposition of amyloid fibrils composed of serum amyloid A protein, an acute phase reactant. Although spleen, suprarenal gland, liver and gut are frequent sites of amyloid deposition, the clinical picture is dominated by renal involvement.","definition_xrefs":["Orphanet:85445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0021179"],"is_obsolete":false,"name":"AA amyloidosis","secondary_identifiers":["UMLS:C3536715","icd11.foundation:570181034","MedDRA:10039811","GARD:10560","ICD9:277.39","MEDGEN:782429","SCTID:281034005","DOID:0080936","NCIT:C3818"],"synonyms":[{"name":"amyloid A amyloidosis","type":"related"},{"name":"amyloidosis AA","type":"related"},{"name":"inflammatory amyloidosis","type":"exact"},{"name":"reactive amyloidosis","type":"exact"},{"name":"secondary amyloidosis","type":"exact"}],"termid":"MONDO:0019439","xrefs":{"Monarch":{"xref_id":"0019439"}}}


id: PBO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-endonuclease Apn2","termid":"PBO:0003563"}


id: MONDO:1012077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"faded shaker, non-human animal","termid":"MONDO:1011841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faded shaker, chicken","secondary_identifiers":["OMIA:000365-9031"],"termid":"MONDO:1012077","xrefs":{"Monarch":{"xref_id":"1012077"}}}


id: FYPO:0003217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the chromatin silencing at the central core of the centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere central core","termid":"FYPO:0000640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere central core","synonyms":[{"name":"decreased chromatin silencing at centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere central core during vegetative growth","type":"exact"},{"name":"decreased negative regulation of transcription at centromere central core","type":"related"},{"name":"decreased transcriptional repression at centromere central core","type":"related"},{"name":"reduced chromatin silencing at centromere central core","type":"exact"}],"termid":"FYPO:0003217"}


id: GO:1901215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron death (obsolete GO:1901215)","synonyms":[{"name":"down regulation of neuron cell death","type":"exact"},{"name":"down regulation of neuron death","type":"exact"},{"name":"down regulation of neuronal cell death","type":"exact"},{"name":"down-regulation of neuron cell death","type":"exact"},{"name":"down-regulation of neuron death","type":"exact"},{"name":"down-regulation of neuronal cell death","type":"exact"},{"name":"downregulation of neuron cell death","type":"exact"},{"name":"downregulation of neuron death","type":"exact"},{"name":"downregulation of neuronal cell death","type":"exact"},{"name":"inhibition of neuron cell death","type":"narrow"},{"name":"inhibition of neuron death","type":"narrow"},{"name":"inhibition of neuronal cell death","type":"narrow"},{"name":"negative regulation of neuron cell death","type":"exact"},{"name":"negative regulation of neuronal cell death","type":"exact"}],"termid":"GO:1901215"}


id: PBO:0042721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein A","termid":"PBO:0042721"}


id: SO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exemplar is a representative cDNA sequence for each gene. The exemplar approach is a method that usually involves some initial clustering into gene groups and the subsequent selection of a representative from each gene group.","direct_ancestors":[{"relation_name":"has_quality","term_name":"exemplar","termid":"SO:0000864"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_mRNA","synonyms":[{"name":"exemplar mRNA","type":"exact"}],"termid":"SO:0000734"}


id: PBO:0013020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Rad52 (previously Rad22)","termid":"PBO:0013020"}


id: PBO:0055487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2920","termid":"PBO:0055487"}


id: GO:0006563
data:
  {"annotated_genes":["SJAG_00582","SJAG_01880","SJAG_02313","SJAG_03914","SJAG_04449","SJAG_02791","SJAG_01766","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77865,73035,76507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[72496,73736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[61081,80049,117209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02313":null,"SJAG_02791":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-serine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-serine metabolism","type":"exact"}],"termid":"GO:0006563","terms_by_termid":{"GO:0006535":null,"GO:0006564":null,"GO:0019264":null}}


id: MONDO:0014065
data:
  {"annotated_genes":["SJAG_00080"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85487],"is_not":false,"summary":null,"term":"MONDO:0014065"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the UQCRQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15912","MEDGEN:767521","OMIM:615159","DOID:0080113","UMLS:C3554607"],"synonyms":[{"name":"MC3DN4","type":"related"},{"name":"UQCRQ mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in UQCRQ","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 4","type":"related"}],"termid":"MONDO:0014065","terms_by_termid":{"MONDO:0014065":null},"xrefs":{"Monarch":{"xref_id":"0014065"}}}


id: GO:1990043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage immediately 5' to pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["GOC:al","PMID:9708997","EC:3.1.25.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonuclease (pyrimidine dimer) activity","termid":"GO:0033892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5' deoxyribonuclease (pyrimidine dimer) activity","termid":"GO:1990043"}


id: PBO:0069003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 247, pseudogene","termid":"PBO:0069003"}


id: PBO:0044573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 3","termid":"PBO:0044573"}


id: PBO:0071188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 29","termid":"PBO:0071188"}


id: PBO:0049057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 62","termid":"PBO:0049057"}


id: GO:0019407
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"},{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"hexitol catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"hexitol breakdown","type":"exact"},{"name":"hexitol catabolism","type":"exact"},{"name":"hexitol degradation","type":"exact"}],"termid":"GO:0019407","terms_by_termid":{"GO:0006062":null}}


id: GO:0170006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which lipoate is transported across a membrane.","definition_xrefs":["PMID:25971966","PMID:20980265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipoate transmembrane transport","termid":"GO:0170006"}


id: PBO:0088354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase/IP8 pyrophosphatase","termid":"PBO:0088354"}


id: PBO:0040368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 5","termid":"PBO:0040368"}


id: MONDO:0012270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Tukel syndrome","secondary_identifiers":["MEDGEN:332153","OMIM:609428","UMLS:C1836217","DOID:0081021","GARD:9814","icd11.foundation:2132105652","MESH:C536925"],"synonyms":[{"name":"Cfeom-U","type":"related"},{"name":"Tukel syndrome","type":"exact"},{"name":"congenital extraocular muscle fibrosis with ulnar hand anomalies","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, 4","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, with ulnar hand anomalies","type":"related"}],"termid":"MONDO:0012270","xrefs":{"Monarch":{"xref_id":"0012270"}}}


id: PBO:0054853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2267","termid":"PBO:0054853"}


id: GO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a spore-bearing structure by fungus where spores will arise from asexual reproduction.","definition_xrefs":["GOC:clt","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development","termid":"GO:0030584"},{"relation_name":"part_of","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocarp development involved in asexual reproduction","synonyms":[{"name":"conidium development","type":"narrow"},{"name":"fruiting body formation involved in asexual reproduction","type":"broad"},{"name":"haploid fruiting","type":"related"},{"name":"homokaryotic fruiting","type":"related"},{"name":"imperfect stage fruiting body development","type":"narrow"},{"name":"monokaryotic fruiting","type":"related"}],"termid":"GO:0000905"}


id: PBO:0056546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple coagulation factor deficiency 2 pseudogene 1","termid":"PBO:0056546"}


id: SO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_J_C_cluster","synonyms":[{"name":"V DJ J C cluster","type":"exact"},{"name":"V-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000564"}


id: GO:0070568
data:
  {"annotated_genes":["SJAG_03188","SJAG_04233","SJAG_00890","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103405,75828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004475"},{"annotations":[75890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[73665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a guanylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_01724":null,"SJAG_03188":null,"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070568","terms_by_termid":{"GO:0004475":null,"GO:0004484":null,"GO:0008193":null}}


id: FYPO:0005376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which proteolysis is abnormal. Proteolysis is the hydrolysis of one or more peptide bonds within a protein.","definition_xrefs":["PomBase:mah","GO:0006508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal proteolysis","synonyms":[{"name":"abnormal peptidolysis","type":"exact"},{"name":"abnormal protein cleavage","type":"narrow"}],"termid":"FYPO:0005376"}


id: PBO:0013002
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013002"}


id: PBO:0030547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_valine_import","termid":"PBO:0030547"}


id: FYPO:0001014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal membrane organization during nitrogen starvation","synonyms":[{"name":"abnormal cellular membrane organization during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organisation during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organization during nitrogen depletion","type":"exact"},{"name":"abnormal membrane organization during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001014"}


id: MONDO:0021107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sleep disorder characterized by a tendency for excessive sleepiness during the day which occurs even after adequate sleep in the nighttime. The persons who suffer from this condition experience fatigue and may fall asleep at inappropriate times during the day.","definition_xrefs":["NCIT:C84489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy","secondary_identifiers":["SCTID:60380001","Orphanet:619284","MESH:D009290","UMLS:C0027404","DOID:8986","MEDGEN:45001","GARD:22460","icd11.foundation:1201727099"],"synonyms":[{"name":"narcolepsy with or without cataplexy","type":"exact"},{"name":"narcolepsy, without cataplexy","type":"narrow"},{"name":"paroxysmal sleep","type":"exact"}],"termid":"MONDO:0021107","xrefs":{"Monarch":{"xref_id":"0021107"}}}


id: PBO:0028535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028535"}


id: PATO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000341 sporophytic compatability value (obsolete PATO:0000341)","termid":"PATO:0000341"}


id: PBO:0073006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 5","termid":"PBO:0073006"}


id: PBO:0069142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 393, pseudogene","termid":"PBO:0069142"}


id: GO:1901728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monensin A.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monensin A metabolic process","synonyms":[{"name":"monensin A metabolism","type":"exact"},{"name":"monensin metabolism","type":"exact"}],"termid":"GO:1901728"}


id: GO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an S-layer enveloping the cell. The S-layer is a crystalline protein layer surrounding some bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-layer organization","synonyms":[{"name":"S-layer organisation","type":"exact"},{"name":"S-layer organization and biogenesis","type":"related"}],"termid":"GO:0045232"}


id: PR:Q10241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mismatch-binding protein cmb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.11c","synonyms":[{"name":"Spom972h-cmb1","type":"exact"}],"termid":"PR:Q10241"}


id: GO:0060920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a pacemaker cell. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell differentiation","synonyms":[{"name":"pacemaker cell differentiation","type":"broad"}],"termid":"GO:0060920"}


id: PBO:0071660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 1","termid":"PBO:0071660"}


id: PBO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 1","termid":"PBO:0046282"}


id: PBO:0117176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNGB3 antisense RNA 1","termid":"PBO:0117176"}


id: PBO:0003749
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.50","termid":"PBO:0003749"}


id: GO:0008342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in an insect larva.","definition_xrefs":["GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval feeding behavior (sensu Insecta) (obsolete GO:0008342)","synonyms":[{"name":"larval feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0008342"}


id: PBO:0077408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 143","termid":"PBO:0077408"}


id: PBO:0091780
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteractor of CENP-A loading Protein","termid":"PBO:0091780"}


id: PBO:0065907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab9 effector protein with kelch motifs","termid":"PBO:0065907"}


id: PBO:0084123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hEST1A/B (SMG5/6)-like protein; contributes to environment-sensing adaptive gene expression responses; Esl2p and Esl1p contain a 14-3-3-like domain and a putative PilT N-terminus ribonuclease domain; interacts with Pex14p; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; ESL2 has a paralog, ESL1, that arose from the whole genome duplication","termid":"PBO:0084123"}


id: GO:0033194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroperoxide stimulus. Hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroperoxide","termid":"GO:0033194"}


id: PBO:0056239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog, exon junction complex subunit","termid":"PBO:0056239"}


id: MONDO:1012792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypotrichosis that occurs in cattle due to a mutation in the KRT71 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypotrichosis, non-human animal","termid":"MONDO:1012977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis, KRT71-related, cattle","secondary_identifiers":["OMIA:002114-9913"],"termid":"MONDO:1012792","xrefs":{"Monarch":{"xref_id":"1012792"}}}


id: MONDO:1012644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in pigs and is characterized by no detectable or a severe quantitative deficiency of the glycoprotein von Willebrand factor (vWF) due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001058-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, pig","termid":"MONDO:1011615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease III, pig","termid":"MONDO:1012644","xrefs":{"Monarch":{"xref_id":"1012644"}}}


id: MONDO:0013443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the CEP152 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 5","secondary_identifiers":["GARD:15719","MEDGEN:462537","OMIM:613823","DOID:0070012","UMLS:C3151187"],"synonyms":[{"name":"CEP152 Seckel syndrome","type":"exact"},{"name":"SCKL5","type":"exact"},{"name":"Seckel syndrome 5","type":"exact"},{"name":"Seckel syndrome caused by mutation in CEP152","type":"exact"},{"name":"Seckel syndrome type 5","type":"exact"}],"termid":"MONDO:0013443","xrefs":{"Monarch":{"xref_id":"0013443"}}}


id: PATO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000532 micronutrient sensitivity value (obsolete PATO:0000532)","termid":"PATO:0000532"}


id: GO:1990897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that phosphorylates serine 2 residues in the CTD domain of productively elongating large subunits of DNA-directed RNA polymerase II, holoenzyme. In S. cerevisiae this complex consists of CTK1/CTK2/CTK3, in S. pombe Lsk1/Lsc1/Lsg1. Human CTK1 homologs include CDK12/13.","definition_xrefs":["PMID:24879308","PMID:20952539"],"gene_count":0,"genotype_count":0,"name":"obsolete CTDK-1 complex (obsolete GO:1990897)","termid":"GO:1990897"}


id: MONDO:0015328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of bone development disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare bone development disorder (obsolete MONDO:0015328)","secondary_identifiers":["NCIT:C34432","Orphanet:139012"],"synonyms":[{"name":"bone development disorder","type":"exact"},{"name":"rare bone development disease","type":"exact"},{"name":"rare skeletal development disorder","type":"exact"}],"termid":"MONDO:0015328","xrefs":{"Monarch":{"xref_id":"0015328"}}}


id: GO:0050639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-desacetyltaxuyunnanin C + acetyl-CoA = CoA + taxuyunnanin C.","definition_xrefs":["EC:2.3.1.163","RHEA:18837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"10-hydroxytaxane O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07252","MetaCyc:2.3.1.163-RXN"],"synonyms":[{"name":"acetyl coenzyme A: 10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl coenzyme A:10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050639"}


id: MONDO:0011567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in variation in the chromosome region 6q12-q16.","definition_xrefs":["PMID:11085912","DOID:0110437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1K","secondary_identifiers":["MEDGEN:381354","GARD:15382","MESH:C565320","OMIM:605582","UMLS:C1854159"],"synonyms":[{"name":"CMD1K","type":"exact"},{"name":"cardiomyopathy, dilated, 1K","type":"related"},{"name":"dilated cardiomyopathy type 1K","type":"exact"}],"termid":"MONDO:0011567","xrefs":{"Monarch":{"xref_id":"0011567"}}}


id: FYPO:0003046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC3L boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC3L","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC3L during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC3L during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC3L","type":"exact"}],"termid":"FYPO:0003046"}


id: GO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["GOC:mtg_transport","GOC:jl","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}


id: FYPO:0008337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules occurs to a lower extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008337"}


id: PBO:0047607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 2","termid":"PBO:0047607"}


id: GO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"GABA receptor binding","synonyms":[{"name":"4-aminobutanoate receptor binding","type":"exact"},{"name":"4-aminobutyrate receptor binding","type":"exact"},{"name":"diazepam binding inhibitor activity","type":"related"},{"name":"gamma-aminobutyric acid receptor binding","type":"exact"}],"termid":"GO:0050811"}


id: GO:0016497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with substance K, the peptide His-Lys-Thr-Asp-Ser-Phe-Val-Gly-Leu-Met, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"substance K receptor activity","synonyms":[{"name":"neurokinin A receptor activity","type":"exact"},{"name":"neuromedin L receptor activity","type":"exact"}],"termid":"GO:0016497"}


id: GO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased by the chemicals epinephrine and norepinephrine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: PBO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G elongation factor mitochondrial 1","termid":"PBO:0048549"}


id: FYPO:0007452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends end of microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:15809031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule end during mitotic interphase","termid":"FYPO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to microtubule plus-end","synonyms":[{"name":"normal protein localisation to microtubule plus-end","type":"exact"},{"name":"normal protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"normal protein localization to microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0007452"}


id: PBO:0088088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:dolichyl-phosphate glucosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum; human ortholog ALG5 can partially complement yeast alg5 mutant","termid":"PBO:0088088"}


id: PBO:0066590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member D","termid":"PBO:0066590"}


id: PBO:0059535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Phe (UUU/C)","termid":"PBO:0059535"}


id: PBO:0069747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1028, pseudogene","termid":"PBO:0069747"}


id: GO:0002893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of type II hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"negatively_regulates","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type II hypersensitivity","synonyms":[{"name":"down regulation of type II hypersensitivity","type":"exact"},{"name":"down-regulation of type II hypersensitivity","type":"exact"},{"name":"downregulation of type II hypersensitivity","type":"exact"},{"name":"inhibition of type II hypersensitivity","type":"narrow"}],"termid":"GO:0002893"}


