# terms

id: PBO:0072641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 2',3'-cyclic phosphate and 5'-OH ligase","termid":"PBO:0072641"}


id: PBO:0040158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit family member 4","termid":"PBO:0040158"}


id: MONDO:0032911
data:
  {"annotated_genes":["SJAG_05282","SJAG_04613"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87054,87055],"is_not":false,"summary":null,"term":"MONDO:0032911"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04613":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 75","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394059","DOID:0112166","GARD:18153","OMIM:618778","MEDGEN:1713569"],"synonyms":[{"name":"DEAFNESS, AUTOSOMAL DOMINANT 75","type":"narrow"},{"name":"DFNA75","type":"narrow"},{"name":"deafness, autosomal dominant 75","type":"narrow"}],"termid":"MONDO:0032911","terms_by_termid":{"MONDO:0032911":null},"xrefs":{"Monarch":{"xref_id":"0032911"}}}


id: GO:0046348
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar catabolic process","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"amino sugar breakdown","type":"exact"},{"name":"amino sugar catabolism","type":"exact"},{"name":"amino sugar degradation","type":"exact"},{"name":"aminosaccharide catabolic process","type":"exact"},{"name":"aminosaccharide catabolism","type":"exact"}],"termid":"GO:0046348","terms_by_termid":{"GO:0006032":null}}


id: PBO:0062455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 128 pseudogene","termid":"PBO:0062455"}


id: GO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body as part of an immune response.","definition_xrefs":["PMID:14708592","ISBN:0781735149","PMID:14680625","PMID:7507411","PMID:8600538","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in immune response","synonyms":[{"name":"immune cell migration during immune response","type":"exact"},{"name":"immune cell trafficking during immune response","type":"exact"},{"name":"leucocyte migration during immune response","type":"exact"},{"name":"leucocyte trafficking during immune response","type":"exact"},{"name":"leukocyte trafficking during immune response","type":"exact"}],"termid":"GO:0002522"}


id: MOD:00684
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid.","definition_xrefs":["RESID:AA0004#ASN","PubMed:9582379","PubMed:1097438","PubMed:6692818","PubMed:8089117","Unimod:7#N","PubMed:9521123","PubMed:339692","PubMed:5764436","PubMed:4399050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid residue","termid":"MOD:00013"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated L-asparagine","synonyms":[{"name":"(2S)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"L-aspartic acid","type":"exact"},{"name":"MOD_RES Deamidated asparagine","type":"exact"},{"name":"aminosuccinic acid","type":"exact"},{"name":"dNAsn","type":"exact"}],"termid":"MOD:00684"}


id: PBO:0060518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear prelamin A recognition factor","termid":"PBO:0060518"}


id: PBO:0090556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone for ribosomal protein Rpl4, TPR repeat protein Acl4","termid":"PBO:0090556"}


id: GO:1990565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase chaperone complex required for the proper folding, maturation and stabilization of target proteins (mostly signaling protein kinases, some steroid hormone receptors), usually during or immediately after completion of translation. The highly conserved, phosphorylated CDC37-Ser13 (vertebrates) or cdc37-Ser14 (yeast) is essential for complex assembly and target protein binding. CDC37-Ser13 (Ser14) is phosphorylated by Casein kinase II (CK2), which in turn is a target of CDC37 creating a positive feedback loop. Complex binding also prevents rapid ubiquitin-dependent proteosomal degradation of target proteins.","definition_xrefs":["GOC:pad","GOC:PARL","PMID:21855797","PMID:22939624","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"HSP90-CDC37 chaperone complex","termid":"GO:1990565"}


id: PBO:0047459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 3","termid":"PBO:0047459"}


id: PBO:0052923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-6","termid":"PBO:0052923"}


id: GO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + 3,4',5-trihydroxy-stilbene + 4 CO2.","definition_xrefs":["EC:2.3.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trihydroxystilbene synthase activity","secondary_identifiers":["RHEA:11936","MetaCyc:RXN-87"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"},{"name":"resveratrol synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050350"}


id: PBO:0089293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rnf170","termid":"PBO:0089293"}


id: RO:HOM0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_between-species_paralogy_relationship_with","synonyms":[{"name":"between-species paralogous to","type":"exact"}],"termid":"RO:HOM0000050"}


id: GO:0014872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a myoblast into daughter cells. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast division","termid":"GO:0014872"}


id: PBO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 11","termid":"PBO:0060110"}


id: FYPO:0004772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular histidine level","termid":"FYPO:0001567"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar histidine level","synonyms":[{"name":"increased level of histidine in vacuole","type":"exact"},{"name":"increased vacuolar L-histidine level","type":"exact"},{"name":"increased vacuolar histidine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar histidine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004772"}


id: MONDO:0019796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrocephalosyndactyly (ACS) syndromes represent a group of inherited congenital malformation disorders characterized by craniosynostosis and fusion or webbing of the fingers or toes, often with other associated manifestations.","definition_xrefs":["Orphanet:946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrocephalosyndactyly","secondary_identifiers":["MEDGEN:267602","NCIT:C34348","DOID:12960","MedDRA:10000590","ICD9:755.55","SCTID:268262006","UMLS:C1510455"],"synonyms":[{"name":"ACS","type":"exact"},{"name":"acrocephalosyndactylia","type":"exact"},{"name":"acrocephalosyndactyly","type":"exact"}],"termid":"MONDO:0019796","xrefs":{"Monarch":{"xref_id":"0019796"}}}


id: PBO:0015267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator/ ubiquitin-protein ligase (predicted)","termid":"PBO:0015267"}


id: PBO:0074728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 86","termid":"PBO:0074728"}


id: PBO:0050636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSFY1 pseudogene 1","termid":"PBO:0050636"}


id: MOD:00417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidoethyl-L-cysteine.","definition_xrefs":["DeltaMass:72","Unimod:24#C","OMSSA:5","PubMed:1481983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidoethyl-L-cysteine","synonyms":[{"name":"Acrylamide adduct","type":"related"},{"name":"PAM-Cys","type":"exact"},{"name":"Propionamide","type":"related"},{"name":"Propionamide or Acrylamide adduct","type":"exact"},{"name":"S-(3-amino-3-oxopropyl)cysteine","type":"exact"},{"name":"S-carbamoylethyl-L-cysteine","type":"exact"},{"name":"S-propanamide-L-cysteine","type":"exact"},{"name":"propionamidec","type":"exact"}],"termid":"MOD:00417"}


id: GO:0051709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of killing of cells of another organism","secondary_identifiers":["GO:0052248","GO:0052433","GO:0044531","GO:0052459"],"synonyms":[{"name":"modulation by organism of apoptotic process in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation of programmed cell death in other organism","type":"narrow"},{"name":"modulation of programmed cell death in other organism involved in symbiotic interaction","type":"narrow"},{"name":"regulation of killing of cells of other organism","type":"exact"}],"termid":"GO:0051709"}


id: GO:0033479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-galacturonate, a substance composed of galacturonic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-D-galacturonate metabolic process","synonyms":[{"name":"UDP-D-galacturonate metabolism","type":"exact"}],"termid":"GO:0033479"}


id: PBO:0029851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029851"}


id: PBO:0082198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoinase; converts allantoin to allantoate in the first step of allantoin degradation; expression sensitive to nitrogen catabolite repression","termid":"PBO:0082198"}


id: PR:Q9UTN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00402","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxaloacetate transport protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.02c","secondary_identifiers":["UniProtKB:Q9UTN1"],"synonyms":[{"name":"Spom972h-SLC25A34","type":"exact"}],"termid":"PR:Q9UTN1"}


id: PBO:0027837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027837"}


id: PBO:0066692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RMDN2 antisense RNA 1","termid":"PBO:0066692"}


id: PBO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_input","termid":"PBO:0006175"}


id: PBO:0070036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1333, pseudogene","termid":"PBO:0070036"}


id: GO:1905772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesodermal cell differentiation.","definition_xrefs":["GOC:rph","PMID:23765923","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"positively_regulates","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell differentiation","synonyms":[{"name":"activation of mesoderm cell differentiation","type":"narrow"},{"name":"activation of mesodermal cell differentiation","type":"narrow"},{"name":"positive regulation of mesoderm cell differentiation","type":"exact"},{"name":"up regulation of mesoderm cell differentiation","type":"exact"},{"name":"up regulation of mesodermal cell differentiation","type":"exact"},{"name":"up-regulation of mesoderm cell differentiation","type":"exact"},{"name":"up-regulation of mesodermal cell differentiation","type":"exact"},{"name":"upregulation of mesoderm cell differentiation","type":"exact"},{"name":"upregulation of mesodermal cell differentiation","type":"exact"}],"termid":"GO:1905772"}


id: SO:1000108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000108 mutaton_causing_inframe_polypeptide_C_terminal_elongation (obsolete SO:1000108)","synonyms":[{"name":"inframe_polypeptide C-terminal elongation","type":"exact"},{"name":"mutaton causing inframe polypeptide C terminal elongation","type":"exact"}],"termid":"SO:1000108"}


id: MONDO:0016471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pachyonychia congenita (PC) is a rare genodermatosis predominantly featuring painful palmoplantar keratoderma, thickened nails, cysts and whitish oral mucosa.","definition_xrefs":["Orphanet:2309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita","secondary_identifiers":["OMIMPS:167200","UMLS:C0265334","NORD:1542","DOID:0050449","MESH:D053549","GARD:10753","icd11.foundation:1446983705","MEDGEN:78556","NCIT:C84986"],"synonyms":[{"name":"Jackson-Lawler type pachyonychia congenita","type":"exact"},{"name":"Jadassohn-Lewandowsky syndrome","type":"exact"},{"name":"PC","type":"exact"},{"name":"congenital pachyonychia","type":"related"},{"name":"pachyonychia congenita syndrome","type":"related"},{"name":"pachyonychia congenita type 1","type":"narrow"},{"name":"pachyonychia congenita, Jadassohn-Lewandowsky type","type":"exact"}],"termid":"MONDO:0016471","xrefs":{"Monarch":{"xref_id":"0016471"}}}


id: GO:1902237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:rl","PMID:20160352","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of ER stress-induced apoptosis","type":"narrow"},{"name":"activation of apoptosis in response to ER stress","type":"narrow"},{"name":"activation of apoptosis triggered by ER stress","type":"narrow"},{"name":"activation of endoplasmic reticulum stress-induced apoptosis","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress-induced apoptosis","type":"exact"},{"name":"positive regulation of apoptosis in response to ER stress","type":"exact"},{"name":"positive regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"positive regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of ER stress-induced apoptosis","type":"exact"},{"name":"up regulation of apoptosis in response to ER stress","type":"exact"},{"name":"up regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"up regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress-induced apoptosis","type":"exact"},{"name":"up-regulation of apoptosis in response to ER stress","type":"exact"},{"name":"up-regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"up-regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress-induced apoptosis","type":"exact"},{"name":"upregulation of apoptosis in response to ER stress","type":"exact"},{"name":"upregulation of apoptosis triggered by ER stress","type":"exact"},{"name":"upregulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902237"}


id: GO:0140681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri- or a dimethyl-lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:21914792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 demethylase activity","termid":"GO:0051864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0003824","GO:0032452","GO:0140096","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"histone H3K36me2/H3K36me3 demethylase activity","secondary_identifiers":["MetaCyc:RXN-20643","RHEA:60236","EC:1.14.11.69"],"synonyms":[{"name":"histone H3-tri/dimethyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3K36me2 demethylase activity","type":"broad"},{"name":"histone H3K36me3 demethylase activity","type":"related"}],"termid":"GO:0140681"}


id: PBO:0051875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 2","termid":"PBO:0051875"}


id: PBO:0039620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A3","termid":"PBO:0039620"}


id: GO:2000455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"regulates","term_name":"T-helper 17 cell extravasation","termid":"GO:0035699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 cell extravasation","termid":"GO:2000455"}


id: PBO:0088351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase Adh4-like","termid":"PBO:0088351"}


id: GO:0048610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular or single-celled organism.","definition_xrefs":["GOC:jid","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular process involved in reproduction (obsolete GO:0048610)","synonyms":[{"name":"cellular process involved in reproduction","type":"exact"},{"name":"reproductive cellular process","type":"related"}],"termid":"GO:0048610"}


id: PBO:0052945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte associated protein 2","termid":"PBO:0052945"}


id: GO:0031902
data:
  {"annotated_genes":["SJAG_01981","SJAG_04024","SJAG_02429","SJAG_02100","SJAG_03347","SJAG_04023","SJAG_03892","SJAG_04349","SJAG_04513","SJAG_05210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76511,78807,88462,92339,97988,99834,101399],"is_not":false,"summary":null,"term":"GO:0031902"},{"annotations":[119437,62543,60523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a late endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_03347":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04513":null,"SJAG_05210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"late endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"termid":"GO:0031902","terms_by_termid":{"GO:0031902":null,"GO:0032585":null}}


id: PR:Q9UUI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap145 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.10c","synonyms":[{"name":"Spom972h-sap145","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI3"}


id: GO:0004793
data:
  {"annotated_genes":["SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008732"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine = glycine + acetaldehyde.","definition_xrefs":["EC:4.1.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"threonine aldolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:THREONINE-ALDOLASE-RXN","RHEA:19625"],"synonyms":[{"name":"L-threonine acetaldehyde-lyase (glycine-forming)","type":"related"},{"name":"L-threonine acetaldehyde-lyase activity","type":"related"},{"name":"L-threonine aldolase activity","type":"exact"}],"termid":"GO:0004793","terms_by_termid":{"GO:0008732":null}}


id: PBO:0059284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L41","termid":"PBO:0059284"}


id: MONDO:0013762
data:
  {"annotated_genes":["SJAG_03553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86999],"is_not":false,"summary":null,"term":"MONDO:0013762"}]},"cv_name":"mondo","definition":"Lipoic acid synthetase deficiency is a rare condition that affects the mitochondria. Mitochondria are tiny structures found in almost every cell of the body. They are responsible for creating most of the energy necessary to sustain life and support growth. People affected by this condition generally experience early-onset lactic acidosis, severe encephalopathy, seizures, poor growth, hypotonia, and developmental delay. It is caused by changes (mutations) in the LIAS gene and it is inherited in an autosomal recessive pattern. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"},{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0005244","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"lipoic acid synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12678","OMIM:614462","MEDGEN:482517","Orphanet:401859","UMLS:C3280887"],"synonyms":[{"name":"HGCLAS","type":"related"},{"name":"PDHLD","type":"related"},{"name":"hyperglycinemia, lactic acidosis, and seizures","type":"related"},{"name":"pyruvate dehydrogenase lipoic acid synthetase deficiency","type":"related"}],"termid":"MONDO:0013762","terms_by_termid":{"MONDO:0013762":null},"xrefs":{"Monarch":{"xref_id":"0013762"}}}


id: MONDO:0003961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical large cell neuroendocrine carcinoma (obsolete MONDO:0003961)","termid":"MONDO:0003961","xrefs":{"Monarch":{"xref_id":"0003961"}}}


id: PBO:0075699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing regulatory glutamic acid and lysine rich protein 1","termid":"PBO:0075699"}


id: PBO:0056371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8","termid":"PBO:0056371"}


id: PBO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding 1","termid":"PBO:0043123"}


id: GO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a tubulin complex. Includes the synthesis and folding of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex. A tubulin complex is a heterodimer of tubulins alpha and beta, from which microtubules are assembled.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin complex biogenesis (obsolete GO:0072668)","synonyms":[{"name":"tubulin complex biogenesis","type":"exact"}],"termid":"GO:0072668"}


id: FYPO:0005090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cytokinesis RNAs are transcribed from genes whose products are involved in one or more cytokinetic processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005090"}


id: GO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by phosphopantetheinylation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein phosphopantetheinylation","synonyms":[{"name":"protein amino acid phosphopantetheinylation","type":"exact"}],"termid":"GO:0018215"}


id: PBO:0116611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3137","termid":"PBO:0116611"}


id: PBO:0057186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 342","termid":"PBO:0057186"}


id: MONDO:0800195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achalasia-alacrima syndrome","synonyms":[{"name":"AAAS","type":"exact"}],"termid":"MONDO:0800195","xrefs":{"Monarch":{"xref_id":"0800195"}}}


id: PBO:0076563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3D","termid":"PBO:0076563"}


id: GO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gonadotropin-releasing hormone to initiate a change in cell activity. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor activity","synonyms":[{"name":"GnRH receptor activity","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor activity","type":"exact"}],"termid":"GO:0004968"}


id: PBO:0078785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-2","termid":"PBO:0078785"}


id: PBO:0060269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 3","termid":"PBO:0060269"}


id: PBO:0027165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_azygotic_ascus_with_more_than_four_spores","termid":"PBO:0027165"}


id: PBO:0089642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer delta subunit Ret2","termid":"PBO:0089642"}


id: PR:Q9P7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ker1 gene.","definition_xrefs":["UniProtKB:Q9P7P1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.03","synonyms":[{"name":"DNA-directed RNA polymerase I 17 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ker1","type":"exact"},{"name":"nucleolar protein ker1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P1"}


id: PBO:0030745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030745"}


id: PBO:0083924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose 1,6-bisphosphate aldolase; required for glycolysis and gluconeogenesis; catalyzes conversion of fructose 1,6 bisphosphate to glyceraldehyde-3-P and dihydroxyacetone-P; locates to mitochondrial outer surface upon oxidative stress; N-terminally propionylated in vivo","termid":"PBO:0083924"}


id: PBO:0049118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 183","termid":"PBO:0049118"}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: GO:1903081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of C-C chemokine receptor CCR7 signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rl","PMID:11602640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine-mediated signaling pathway","termid":"GO:0070100"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine receptor CCR7 signaling pathway","termid":"GO:1903080"},{"relation_name":"negatively_regulates","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"down regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"down regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"down regulation of CCR7 signaling pathway","type":"related"},{"name":"down-regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"down-regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"down-regulation of CCR7 signaling pathway","type":"related"},{"name":"downregulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"downregulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"downregulation of CCR7 signaling pathway","type":"related"},{"name":"inhibition of C-C chemokine receptor CCR7 signaling pathway","type":"narrow"},{"name":"inhibition of C-C chemokine receptor CCR7 signalling pathway","type":"narrow"},{"name":"inhibition of CCR7 signaling pathway","type":"related"},{"name":"negative regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"negative regulation of CCR7 signaling pathway","type":"related"}],"termid":"GO:1903081"}


id: PBO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 45","termid":"PBO:0042841"}


id: MOD:00308
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an L-glutamine residue to form a carboxyl-terminal L-glutamimide.","definition_xrefs":["Unimod:23#Q","PubMed:14593103","PubMed:12771378","RESID:AA0303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamimide","synonyms":[{"name":"(3S)-3-aminopiperidine-2,6-dione","type":"exact"},{"name":"2-aminopentanimide","type":"exact"},{"name":"3-amino-2,6-piperidinedione","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"L-glutamimide","type":"exact"},{"name":"alpha-aminoglutarimide","type":"exact"}],"termid":"MOD:00308"}


id: PBO:0004109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 (predicted)","termid":"PBO:0004109"}


id: GO:0098824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine sulfation (obsolete GO:0098824)","termid":"GO:0098824"}


id: GO:0033185
data:
  {"annotated_genes":["SJAG_05219","SJAG_00831","SJAG_02903"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96753,104086,107035],"is_not":false,"summary":null,"term":"GO:0033185"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively.","definition_xrefs":["PMID:10835346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00831":null,"SJAG_02903":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dolichol-phosphate-mannose synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPM synthase complex","type":"exact"},{"name":"dolichyl-phosphate beta-D-mannosyltransferase complex","type":"exact"}],"termid":"GO:0033185","terms_by_termid":{"GO:0033185":null}}


id: MONDO:0011406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesteatoma, congenital","secondary_identifiers":["MEDGEN:95999","UMLS:C0395886","OMIM:604183","SCTID:232262007","MESH:C562858"],"synonyms":[{"name":"cholesteatoma, congenital","type":"exact"}],"termid":"MONDO:0011406","xrefs":{"Monarch":{"xref_id":"0011406"}}}


id: GO:1902819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethyl acetate.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000068","PMID:16013377","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"ethyl acetate metabolic process","termid":"GO:1902818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate biosynthetic process","synonyms":[{"name":"ethyl acetate anabolism","type":"exact"},{"name":"ethyl acetate biosynthesis","type":"exact"},{"name":"ethyl acetate formation","type":"exact"},{"name":"ethyl acetate synthesis","type":"exact"},{"name":"ethyl ethanoate biosynthetic process","type":"exact"}],"termid":"GO:1902819"}


id: SO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of polypeptide with a given structural property.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_structural_region","secondary_identifiers":["BS:00337"],"synonyms":[{"name":"polypeptide structural region","type":"exact"},{"name":"structural_region","type":"related"}],"termid":"SO:0001070"}


id: GO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct. An example of this is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"ovulation","termid":"GO:0030728"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation from ovarian follicle","termid":"GO:0001542"}


id: GO:2001108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Rho guanyl-nucleotide exchange factor activity","synonyms":[{"name":"positive regulation of Rho guanine nucleotide exchange factor","type":"exact"},{"name":"positive regulation of RhoGEF","type":"exact"}],"termid":"GO:2001108"}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: PBO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 2","termid":"PBO:0001660"}


id: PBO:0077703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C2, fast skeletal type","termid":"PBO:0077703"}


id: GO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of peptidoglycan recognition protein signaling pathway","termid":"GO:0061058"},{"relation_name":"is_a","term_name":"negative regulation of defense response to bacterium","termid":"GO:1900425"},{"relation_name":"negatively_regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"negative regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061060"}


id: PATO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being oval and a little angular in the middle.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallelogram","termid":"PATO:0002317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid","termid":"PATO:0001938"}


id: GO:0043216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + daunorubicin(in) = ADP + phosphate + daunorubicin(out).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled daunorubicin transmembrane transporter activity (obsolete GO:0043216)","synonyms":[{"name":"ATP-dependent daunorubicin transmembrane transporter activity","type":"exact"},{"name":"daunorubicin ABC transporter","type":"narrow"},{"name":"daunorubicin-transporting ATPase activity","type":"exact"}],"termid":"GO:0043216"}


id: PBO:0083717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein that functions in assembly of the V0 sector of V-ATPase; functions with other assembly factors; null mutation enhances the vacuolar ATPase (V-ATPase) deficiency of a vma21 mutant impaired in endoplasmic reticulum (ER) retrieval","termid":"PBO:0083717"}


id: FYPO:0004576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:25398909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0001442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004576"}


id: MONDO:0004757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the ethmoid sinus that typically lasts beyond eight weeks. It is caused by infections, allergies, and the presence of sinus polyps or a deviated septum. Signs and symptoms include headache, nasal discharge, swelling in the face, dizziness, and breathing difficulties.","definition_xrefs":["NCIT:C34472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinusitis","termid":"MONDO:0005756"},{"relation_name":"is_a","term_name":"chronic rhinosinusitis","termid":"MONDO:0006031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic ethmoidal sinusitis","secondary_identifiers":["ICD10CM:J32.2","UMLS:C0008681","icd11.foundation:1076459084","MEDGEN:3454","DOID:9312","ICD9:473.2","SCTID:73237007"],"synonyms":[{"name":"chronic ethmoid sinusitis","type":"exact"},{"name":"chronic ethmoidal sinusitis","type":"exact"},{"name":"chronic ethmoiditis","type":"related"},{"name":"ethmoid sinusitis, chronic","type":"exact"},{"name":"ethmoidal sinusitis - chronic","type":"exact"}],"termid":"MONDO:0004757","xrefs":{"Monarch":{"xref_id":"0004757"}}}


id: PBO:0048409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GASK1B antisense RNA 1","termid":"PBO:0048409"}


id: PBO:0089951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA ligase Mse1","termid":"PBO:0089951"}


id: MONDO:0016274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare cervical cancer.","gene_count":0,"genotype_count":0,"name":"obsolete rare cancer of cervix uteri (obsolete MONDO:0016274)","secondary_identifiers":["Orphanet:213761"],"synonyms":[{"name":"rare cervical cancer","type":"exact"},{"name":"rare cervical malignant tumor","type":"exact"},{"name":"rare malignant tumor of cervix uteri","type":"exact"}],"termid":"MONDO:0016274","xrefs":{"Monarch":{"xref_id":"0016274"}}}


id: PR:Q09813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf111 gene.","definition_xrefs":["UniProtKB:Q09813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID 111 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.14","synonyms":[{"name":"Spom972h-taf111","type":"exact"},{"name":"TAFII-111 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP-associated factor 111 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09813"}


id: GO:0015305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (lactose or galactose)(out) + H+(out) = (lactose or galactose)(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.9"],"gene_count":0,"genotype_count":0,"name":"obsolete lactose, galactose:proton symporter activity (obsolete GO:0015305)","synonyms":[{"name":"lactose, galactose:hydrogen symporter activity","type":"exact"},{"name":"lactose, galactose:proton symporter activity","type":"exact"},{"name":"lactose,galactose:proton symporter activity","type":"exact"}],"termid":"GO:0015305"}


id: MOD:01824
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-127 reporter+balance group.","definition_xrefs":["URL:http://www.piercenet.com/files/2162220.pdf","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex-127 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01824"}


id: PR:Q09792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk8 gene.","definition_xrefs":["UniProtKB:Q09792","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.08","synonyms":[{"name":"Spom972h-ppk8","type":"exact"}],"termid":"PR:Q09792"}


id: FYPO:0001946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0001320","FYPO:0000337"],"is_obsolete":false,"name":"abolished mitotic sister chromatid separation","synonyms":[{"name":"abolished mitotic chromosome separation","type":"exact"},{"name":"absent mitotic sister chromatid separation","type":"exact"},{"name":"mitotic sister chromatid separation abolished","type":"exact"}],"termid":"FYPO:0001946"}


id: MONDO:0016750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-cleft palate-abnormal retinal pigmentation syndrome is a rare orofacial clefting syndrome characterized by microcephaly, cleft of the secondary palate and other variable abnormalities, including abnormal retinal pigmentation, facial dysmorphism with hypotelorism and maxillary hypoplasia. Goiter, camptodactyly, abnormal dermatoglyphics and mild intellectual disability may also be associated. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:2521"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-cleft palate syndrome","secondary_identifiers":["MESH:C535622","SCTID:719394002","UMLS:C2930954","MEDGEN:419293","GARD:8623"],"synonyms":[{"name":"Halal syndrome","type":"exact"},{"name":"microcephaly cleft palate autosomal dominant","type":"related"},{"name":"microcephaly-cleft palate-abnormal retinal pigmentation syndrome","type":"related"}],"termid":"MONDO:0016750","xrefs":{"Monarch":{"xref_id":"0016750"}}}


id: GO:0003344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pericardium is generated and organized.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"pericardium development","termid":"GO:0060039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardium morphogenesis","termid":"GO:0003344"}


id: GO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of signal promoting sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade during sporulation (sensu Saccharomyces) (obsolete GO:0000202)","synonyms":[{"name":"MAPKKK cascade during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000202"}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["PMID:19809492","GOC:BHF_telomere","PMID:19858100","GOC:nc","PMID:19214183","GOC:BHF","PMID:19581589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0044085","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: PBO:0116767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPON2 antisense RNA 1","termid":"PBO:0116767"}


id: PBO:0060808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit V2","termid":"PBO:0060808"}


id: PBO:0028934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_OMP_level","termid":"PBO:0028934"}


id: MONDO:0020803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A defect of the bundle branches or fascicles in the electrical conduction system of the heart.","definition_xrefs":["Wikipedia:Bundle_branch_block"],"gene_count":0,"genotype_count":0,"name":"obsolete bundle branch block (obsolete MONDO:0020803)","secondary_identifiers":["NANDO:2200215","NANDO:2100046","SCTID:6374002"],"termid":"MONDO:0020803","xrefs":{"Monarch":{"xref_id":"0020803"}}}


id: GO:0031400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein modification process","synonyms":[{"name":"down regulation of protein modification","type":"exact"},{"name":"down-regulation of protein modification","type":"exact"},{"name":"downregulation of protein modification","type":"exact"},{"name":"inhibition of protein modification","type":"narrow"}],"termid":"GO:0031400"}


id: PBO:0073202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEMA3B antisense RNA 1 (head to head)","termid":"PBO:0073202"}


id: PBO:0040414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit b","termid":"PBO:0040414"}


id: SO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an antisense long, non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_lncRNA_gene","synonyms":[{"name":"antisense lncRNA gene","type":"exact"}],"termid":"SO:0002182"}


id: GO:0035991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of nitric oxide (NO).","definition_xrefs":["GOC:kmv","PMID:21491957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"nitric oxide sensor activity","synonyms":[{"name":"NO sensor activity","type":"exact"}],"termid":"GO:0035991"}


id: GO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + thiomorpholine-3-carboxylate = NAD(P)H + 3,4-dehydro-1,4-thiomorpholine-3-carboxylate.","definition_xrefs":["MetaCyc:1.5.1.25-RXN","EC:1.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thiomorpholine-carboxylate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-5693347"],"synonyms":[{"name":"ketimine reductase activity","type":"related"},{"name":"ketimine-reducing enzyme","type":"related"},{"name":"thiomorpholine-3-carboxylate:NAD(P)+ 5,6-oxidoreductase activity","type":"related"}],"termid":"GO:0047127"}


id: GO:0080135
data:
  {"annotated_genes":["SJAG_03695","SJAG_05000","SJAG_01585","SJAG_00823","SJAG_02392","SJAG_03048","SJAG_03263","SJAG_04457","SJAG_02244","SJAG_01528","SJAG_03705","SJAG_00369","SJAG_01150","SJAG_01253","SJAG_04522","SJAG_00610","SJAG_00293","SJAG_02104","SJAG_01787","SJAG_01205","SJAG_03969","SJAG_01114","SJAG_00642","SJAG_04825","SJAG_03417","SJAG_04666","SJAG_00424","SJAG_03160","SJAG_00573","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107365,96184,118617,99765,104119,107926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[102682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[78422,77771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[112068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[106220,112021,91577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[88426,103160,89778,91106,92756,118208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[89603,116692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"},{"annotations":[112346,117576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[94223,110494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[107721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[78725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[102705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[91249,73026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[109630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cellular response to stress. Cellular response to stress is a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00369":null,"SJAG_00424":null,"SJAG_00573":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00823":null,"SJAG_01114":null,"SJAG_01150":null,"SJAG_01205":null,"SJAG_01253":null,"SJAG_01528":null,"SJAG_01585":null,"SJAG_01787":null,"SJAG_02104":null,"SJAG_02244":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03263":null,"SJAG_03345":null,"SJAG_03417":null,"SJAG_03695":null,"SJAG_03705":null,"SJAG_03969":null,"SJAG_04457":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0080135","terms_by_termid":{"GO:0010569":null,"GO:0045739":null,"GO:1900039":null,"GO:1903138":null,"GO:1903139":null,"GO:1904293":null,"GO:1904332":null,"GO:1904547":null,"GO:2000639":null,"GO:2000640":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: GO:1905642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA methylation.","definition_xrefs":["GOC:TermGenie","PMID:27336847","GOC:bc","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA methylation (obsolete GO:1905642)","synonyms":[{"name":"down regulation of DNA methylation","type":"exact"},{"name":"down-regulation of DNA methylation","type":"exact"},{"name":"downregulation of DNA methylation","type":"exact"},{"name":"inhibition of DNA methylation","type":"narrow"}],"termid":"GO:1905642"}


id: GO:0097564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["ISBN:9780124260207","PMID:16607022","PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right lateral basal body pair","termid":"GO:0097564"}


id: GO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome b that has a sulfur atom ligated to the iron of the prosthetic group (heme-thiolate); enzymes:typically monooxygenases acting on lipophilic substrates.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome P450 (obsolete GO:0005490)","synonyms":[{"name":"cytochrome P450","type":"exact"}],"termid":"GO:0005490"}


id: MONDO:0019551
data:
  {"annotated_genes":["SJAG_00031","SJAG_00252","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"},{"annotations":[87310,87311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal dominant hereditary axonal motor and sensory neuropathy (obsolete MONDO:0015360)","termid":"MONDO:0015360"},{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:467894833","GARD:16787","MEDGEN:140747","Orphanet:90120","DOID:0080068","UMLS:C0393807"],"synonyms":[{"name":"CMT6","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 6","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 6","type":"exact"},{"name":"peripheral neuropathy and optic atrophy","type":"exact"}],"termid":"MONDO:0019551","terms_by_termid":{"MONDO:0011002":null,"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0019551"}}}


id: MONDO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stenosis of lacrimal punctum","secondary_identifiers":["DOID:13653","MEDGEN:509869","ICD9:375.52","SCTID:74783009","UMLS:C0155244"],"termid":"MONDO:0001767","xrefs":{"Monarch":{"xref_id":"0001767"}}}


id: GO:0033704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: -3beta-hydroxy-5alpha-pregnane-20-one + NADP+ = 5-alpha-pregnane-3,20-dione + H+ + NADPH.","definition_xrefs":["RHEA:18137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxy-5-alpha-steroid dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R07138","MetaCyc:1.1.1.278-RXN","EC:1.1.1.278"],"synonyms":[{"name":"3beta-hydroxy-5alpha-steroid:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0033704"}


id: MONDO:0014445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the LZTFL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"LZTFL1-related ciliopathy","termid":"MONDO:1040046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 17","secondary_identifiers":["OMIM:615994","DOID:0110139","GARD:16041","UMLS:C3714980","MEDGEN:811538"],"synonyms":[{"name":"BBS17","type":"exact"},{"name":"Bardet-Biedl syndrome 17","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in LZTFL1","type":"exact"},{"name":"Bardet-Biedl syndrome type 17","type":"exact"},{"name":"LZTFL1 Bardet-Biedl syndrome","type":"exact"}],"termid":"MONDO:0014445","xrefs":{"Monarch":{"xref_id":"0014445"}}}


id: PBO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase (M phase inducer) Cdc25","termid":"PBO:0090643"}


id: FYPO:0005286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC1L boundary element.","definition_xrefs":["PomBase:mah","PMID:25972440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC1L","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC1L during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC1L","type":"exact"}],"termid":"FYPO:0005286"}


id: PBO:0082233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima3p overexpression allows the ima1 null mutant to grow on isomaltose; lower activitiy and thermostability in vitro than Ima2p despite sequence difference of only 3 amino acids; cleaves alpha-1,3 linkage of nigerose and turanose, but not alpha-1,5 of leucrose; identical to IMA4","termid":"PBO:0082233"}


id: PBO:0069078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 325, pseudogene","termid":"PBO:0069078"}


id: PBO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 43","termid":"PBO:0050981"}


id: PBO:0069720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1000, pseudogene","termid":"PBO:0069720"}


id: GO:1900342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0006790"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"}


id: PBO:0048734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 5","termid":"PBO:0048734"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: MONDO:0010618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism in which the inheritance is recessive and linked to the q26-q27 region of the X chromosome. The parathyroid glands are usually incompletely developed (parathyroid dysgenesis) or absent (parathyroid agenesis).","definition_xrefs":["NCIT:C131079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, familial isolated 1","termid":"MONDO:0007796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial isolated hypoparathyroidism due to agenesis of parathyroid gland","secondary_identifiers":["MESH:C563238","Orphanet:2239","OMIM:307700","MEDGEN:87437","UMLS:C0342344","DOID:0111388","GARD:16589","icd11.foundation:1282942432"],"synonyms":[{"name":"HYPX","type":"related"},{"name":"X-linked hypoparathyroidism","type":"exact"},{"name":"hypoparathyroidism, X-linked","type":"related"},{"name":"parathyroid glands, agenesis of","type":"related"}],"termid":"MONDO:0010618","xrefs":{"Monarch":{"xref_id":"0010618"}}}


id: PBO:0108600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_causally_upstream_of","termid":"PBO:0108600"}


id: MONDO:0014729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the MAG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 75","secondary_identifiers":["GARD:17813","OMIM:616680","UMLS:C4225250","DOID:0110820","MEDGEN:896387","Orphanet:459056"],"synonyms":[{"name":"MAG hereditary spastic paraplegia","type":"exact"},{"name":"SPG75","type":"exact"},{"name":"autosomal recessive spastic paraplegia 75","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 75","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in MAG","type":"exact"},{"name":"hereditary spastic paraplegia type 75","type":"exact"},{"name":"spastic paraplegia 75, autosomal recessive","type":"exact"}],"termid":"MONDO:0014729","xrefs":{"Monarch":{"xref_id":"0014729"}}}


id: PBO:0077437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 170B","termid":"PBO:0077437"}


id: MONDO:0022989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diomedi bernardi placidi syndrome","termid":"MONDO:0022989","xrefs":{"Monarch":{"xref_id":"0022989"}}}


id: PATO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers and extraembryonic cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Totipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"totipotent","termid":"PATO:0001399"}


id: GO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a host humoral defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of humoral immune response in host by virus (obsolete GO:0046736)","synonyms":[{"name":"active induction of humoral immune response in host by virus","type":"related"},{"name":"active viral induction of humoral immune response in host","type":"exact"}],"termid":"GO:0046736"}


id: GO:0010747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import across plasma membrane","termid":"GO:0010746"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of long-chain fatty acid import into cell","termid":"GO:0140214"},{"relation_name":"positively_regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"positive regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010747"}


id: GO:0034308
data:
  {"annotated_genes":["SJAG_03538","SJAG_04282","SJAG_02421","SJAG_05006","SJAG_03822","SJAG_02406","SJAG_03743","SJAG_02420","SJAG_00827","SJAG_04067","SJAG_03362","SJAG_00240","SJAG_03370","SJAG_01414","SJAG_00381","SJAG_02047","SJAG_01970","SJAG_04866","SJAG_01742"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99055,88847,99056,114918,114919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[96908],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[113990,89378],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[77507,74294,70518,74373,61723,78777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[66343,59043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[110759,110760,99852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_00381":null,"SJAG_00827":null,"SJAG_01414":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03370":null,"SJAG_03538":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"primary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"monohydric alcohol metabolic process","type":"exact"},{"name":"primary alcohol metabolism","type":"exact"}],"termid":"GO:0034308","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0019655":null,"GO:0036172":null,"GO:0090180":null,"GO:2001172":null}}


id: MONDO:0044234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hrm2 (obsolete MONDO:0044234)","secondary_identifiers":["OMIM:139450"],"synonyms":[{"name":"HRM2","type":"related"},{"name":"curly hair","type":"related"},{"name":"hair curvature, variation 1N","type":"related"},{"name":"hair morphology 2","type":"related"},{"name":"hair, curly","type":"exact"}],"termid":"MONDO:0044234","xrefs":{"Monarch":{"xref_id":"0044234"}}}


id: PBO:0114410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific microprotein","termid":"PBO:0114410"}


id: PBO:0069924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1216, pseudogene","termid":"PBO:0069924"}


id: GO:0003785
data:
  {"annotated_genes":["SJAG_04982","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72413,76056],"is_not":false,"summary":null,"term":"GO:0003785"}]},"cv_name":"molecular_function","definition":"Binding to monomeric actin, also known as G-actin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin binding","termid":"GO:0003779"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01993":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003779"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0003779","GO:0005515"],"is_obsolete":false,"name":"actin monomer binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G actin binding","type":"exact"}],"termid":"GO:0003785","terms_by_termid":{"GO:0003785":null}}


id: MONDO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-X-linked congenital disorder of glycosylation with intellectual disability as a major feature (obsolete MONDO:0018286)","secondary_identifiers":["Orphanet:371064"],"synonyms":[{"name":"non-X-linked CDG with intellectual disability as a major feature","type":"exact"}],"termid":"MONDO:0018286","xrefs":{"Monarch":{"xref_id":"0018286"}}}


id: PBO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 20","termid":"PBO:0070996"}


id: PBO:0041056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD7 pseudogene 7","termid":"PBO:0041056"}


id: GO:1904107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus membrane.","definition_xrefs":["GOC:kmv","PMID:25335890","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to microvillus","termid":"GO:1904106"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microvillus membrane","synonyms":[{"name":"protein localisation in microvillus membrane","type":"exact"},{"name":"protein localisation to microvillus membrane","type":"exact"},{"name":"protein localization in microvillus membrane","type":"exact"}],"termid":"GO:1904107"}


id: PBO:0056925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase","termid":"PBO:0056925"}


id: PBO:0073559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 2","termid":"PBO:0073559"}


id: GO:1903112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000058","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"},{"relation_name":"is_a","term_name":"positive regulation of single strand break repair","termid":"GO:1903518"},{"relation_name":"positively_regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of single-strand break repair via homologous recombination","synonyms":[{"name":"activation of single-strand break repair via homologous recombination","type":"narrow"},{"name":"up regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of single-strand break repair via homologous recombination","type":"exact"}],"termid":"GO:1903112"}


id: MONDO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inflammatory process causing damage and fibrosis of the pancreatic parenchyma. Signs and symptoms include abdominal pain, malabsorption and diabetes mellitus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic pancreatitis","secondary_identifiers":["MESH:D050500","UMLS:C0149521","NCIT:C84637","MEDGEN:101753","icd11.foundation:1758007371","ICD9:577.1","EFO:0000342","SCTID:235494005"],"synonyms":[{"name":"pancreatitis, chronic","type":"exact"}],"termid":"MONDO:0005003","xrefs":{"Monarch":{"xref_id":"0005003"}}}


id: PBO:0059373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 6","termid":"PBO:0059373"}


id: PBO:0117026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of PLAAT3 mediated phospholipid metabolism","termid":"PBO:0117026"}


id: MONDO:0012429
data:
  {"annotated_genes":["SJAG_00400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85700],"is_not":false,"summary":null,"term":"MONDO:0012429"}]},"cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the RNASEH2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"RNASEH2B-related type 1 interferonopathy","termid":"MONDO:0700257"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:483677","NANDO:2200894","NCIT:C165673","UMLS:C3489724","OMIM:610181","GARD:15472"],"synonyms":[{"name":"AGS2","type":"related"},{"name":"Aicardi-Goutieres syndrome 2","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in RNASEH2B","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 2","type":"exact"},{"name":"RNASEH2B Aicardi-Goutieres syndrome","type":"exact"},{"name":"RNASEH2B-related Aicardi-Goutieres syndrome","type":"related"}],"termid":"MONDO:0012429","terms_by_termid":{"MONDO:0012429":null},"xrefs":{"Monarch":{"xref_id":"0012429"}}}


id: PBO:0075056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-19","termid":"PBO:0075056"}


id: PBO:0064850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 1","termid":"PBO:0064850"}


id: MONDO:0012756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly characterized by developmental and language delays, mild intellectual disability, social impairments (autism spectrum disorders), mild variable dysmorphism and predisposition to obesity.","definition_xrefs":["Orphanet:261197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal 16p11.2 microdeletion syndrome","secondary_identifiers":["MEDGEN:461504","SCTID:718227006","NCIT:C120408","DOID:0070515","MESH:C579850","OMIM:611913","SCTID:699307007","UMLS:C3150154","ICD9:758.39","GARD:10740"],"synonyms":[{"name":"16p11.2 deletion syndrome","type":"related"},{"name":"Del(16)(p11.2)","type":"related"},{"name":"autism susceptibility 14A","type":"exact"},{"name":"autism, susceptibility to, 14A","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome, 593-KB","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome, 593kb","type":"exact"},{"name":"microdeletion 16p11.2","type":"related"},{"name":"monosomy 16p11.2","type":"related"},{"name":"proximal del(16)(p11.2)","type":"exact"},{"name":"proximal monosomy 16p11.2","type":"exact"}],"termid":"MONDO:0012756","xrefs":{"Monarch":{"xref_id":"0012756"}}}


id: PBO:0061630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 13","termid":"PBO:0061630"}


id: PR:000025005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm3 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm3","pombase_gene_id":"SPBPJ4664.03","synonyms":[{"name":"mfm3","type":"exact"}],"termid":"PR:000025005"}


id: PBO:0017676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transmembrane transporter Trk1","termid":"PBO:0017676"}


id: PBO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof14","termid":"PBO:0001437"}


id: GO:0097372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 18) + NAD+ + H2O = histone H3 L-lysine (position 18) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K18 to NAD, producing nicotinamide.","definition_xrefs":["PMID:22722849","GOC:sp","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0033558","GO:0016746","GO:0019213","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H3K18 deacetylase activity, NAD-dependent","synonyms":[{"name":"NAD-dependent histone H3-K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K18 specific)","type":"exact"}],"termid":"GO:0097372"}


id: PBO:0063073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPLN antisense RNA 1","termid":"PBO:0063073"}


id: PBO:0056062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 2","termid":"PBO:0056062"}


id: PBO:0063400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like","termid":"PBO:0063400"}


id: GO:0009221
data:
  {"annotated_genes":["SJAG_04487","SJAG_04665","SJAG_03771","SJAG_00885","SJAG_02874","SJAG_04657","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92776,107574,95820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[71370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[79844,70279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[68983,92777,71371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[71369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[70278,79817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-166"],"synonyms":[{"name":"pyrimidine deoxyribonucleotide anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleotide formation","type":"exact"},{"name":"pyrimidine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009221","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null}}


id: PBO:0051373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-34 (pseudogene)","termid":"PBO:0051373"}


id: PBO:0058477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5584","termid":"PBO:0058477"}


id: PATO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flavor quality inhering in a bearer by virtue of the bearer's having an acrid, sharp, or disagreeable flavor.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavourful","termid":"PATO:0001329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bitter","termid":"PATO:0002474"}


id: SO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that increases the level or amount of gene product produced.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered_gene_product_level","termid":"SO:0002314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_gene_product_level","synonyms":[{"name":"increased gene product level","type":"exact"},{"name":"increased transcription level","type":"exact"},{"name":"increased_transcription_level","type":"exact"}],"termid":"SO:0002315"}


id: PR:Q9USU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dimethyladenosine transferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethyladenosine transferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.02","secondary_identifiers":["UniProtKB:Q9USU2"],"synonyms":[{"name":"18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"18S rRNA dimethylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DIMT1","type":"exact"}],"termid":"PR:Q9USU2"}


id: PBO:0040907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 11","termid":"PBO:0040907"}


id: MONDO:0014439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the TRIM32 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of TRIM32","termid":"MONDO:0016153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 11","secondary_identifiers":["DOID:0110133","GARD:10210","MEDGEN:395295","MESH:C565920","OMIM:615988","UMLS:C1859569"],"synonyms":[{"name":"BBS11","type":"exact"},{"name":"Bardet-Biedl syndrome 11","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in TRIM32","type":"exact"},{"name":"Bardet-Biedl syndrome type 11","type":"exact"},{"name":"TRIM32 Bardet-Biedl syndrome","type":"exact"}],"termid":"MONDO:0014439","xrefs":{"Monarch":{"xref_id":"0014439"}}}


id: PBO:0089686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxidoreductase-like protein, human OXLD1 ortholog","termid":"PBO:0089686"}


id: GO:1900449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of glutamate receptor signaling pathway","synonyms":[{"name":"regulation of glutamate signaling pathway","type":"exact"},{"name":"regulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900449"}


id: FYPO:0001358
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119863,119860,119859,119861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"},{"annotations":[119622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[119619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[119583,119571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"},{"annotations":[119878,119868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000082"},{"annotations":[119847,119862,119846,119686,119848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000080"},{"annotations":[119785,119789,119478,119781,119737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001355"},{"annotations":[119632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[119728,119726,119551,119727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"},{"annotations":[119755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[119762,119768,119747,119773,119776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"},{"annotations":[119558,119586,119670,119574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000097"},{"annotations":[119628,119621,119626,119493,119620,119627,119492,119491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[119746,119761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000079"},{"annotations":[119561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"},{"annotations":[119669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[119617,119625,119624,119618,119623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"},{"annotations":[119869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000106"},{"annotations":[119552,119673,119672,119553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000107"},{"annotations":[119687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000714"},{"annotations":[119585,119573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[119671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001214"},{"annotations":[119572,119584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"},{"annotations":[119587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000841"},{"annotations":[119756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007522"},{"annotations":[119456,119912,119708,119647,119630,119685,119457,119725,119684,119629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the rate or extent of cell population growth in the vegetative growth phase of the life cycle. Cell population growth refers to an increase in the number of cells in the population as individual cells grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population growth phenotype","termid":"FYPO:0000139"},{"relation_name":"is_a","term_name":"biological process phenotype","termid":"FYPO:0000300"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00409":null,"SJAG_00426":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_00601":null,"SJAG_00610":null,"SJAG_01205":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01787":null,"SJAG_01794":null,"SJAG_01946":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03198":null,"SJAG_03449":null,"SJAG_03453":null,"SJAG_03575":null,"SJAG_03720":null,"SJAG_03892":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04551":null,"SJAG_04671":null,"SJAG_04697":null,"SJAG_04703":null,"SJAG_05207":null},"genotype_count":43,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01680","SJAG_03198","SJAG_03575","SJAG_01946","SJAG_01205"],"name":"vegetative cell population growth phenotype","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04703","SJAG_00409","SJAG_00266","SJAG_04671","SJAG_00426","SJAG_03892","SJAG_02763","SJAG_00364","SJAG_03449","SJAG_04464","SJAG_00514","SJAG_05207","SJAG_01787","SJAG_03720","SJAG_01242","SJAG_00610","SJAG_01680","SJAG_01794","SJAG_00429","SJAG_04287","SJAG_01946","SJAG_01410","SJAG_04697","SJAG_04312","SJAG_02592","SJAG_04551","SJAG_03453","SJAG_01605","SJAG_00601","SJAG_01205","SJAG_03198","SJAG_01355","SJAG_02527"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","rad9delta","crb2delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pka1delta","pck2delta","man1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","cmp7delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","rad26delta","chk1delta","pck1delta","cox6delta","rad3delta","ras1delta","cds1delta","gpd1delta","scd1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","scd2delta","tel1delta","rad51delta","for3delta","mrc1delta","ned1delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","rip1delta","vps32delta","sty1delta","cem1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","oar2delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","gms1delta","vps4delta","pmk1delta"],"synonyms":[{"name":"cell population growth phenotype during vegetative growth","type":"exact"},{"name":"fission yeast cell population growth phenotype during vegetative growth","type":"exact"},{"name":"vegetative cell population growth phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001358","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000078":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000314":null,"FYPO:0000079":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000271":null,"FYPO:0000674":null,"FYPO:0000714":null,"FYPO:0000726":null,"FYPO:0000841":null,"FYPO:0001214":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001408":null,"FYPO:0001690":null,"FYPO:0004481":null,"FYPO:0005152":null,"FYPO:0007521":null,"FYPO:0007522":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0052298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDRBS2 3'UTR overlapping transcript 1","termid":"PBO:0052298"}


id: FYPO:0000600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of vacuolar transport","synonyms":[{"name":"delayed onset of vacuolar protein transport","type":"narrow"},{"name":"delayed onset of vacuolar transport during mitotic cell cycle","type":"related"},{"name":"delayed onset of vacuolar transport during vegetative growth","type":"exact"},{"name":"delayed vacuolar transport","type":"exact"},{"name":"vacuolar transport: delayed","type":"related"}],"termid":"FYPO:0000600"}


id: PBO:0028624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_assembly","termid":"PBO:0028624"}


id: PBO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 6","termid":"PBO:0044655"}


id: GO:0034610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of oligodeoxyribonucleotides to yield deoxyribonucleoside 5'-phosphates.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA nuclease activity","termid":"GO:0004536"},{"relation_name":"is_a","term_name":"oligonucleotidase activity","termid":"GO:0008946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"oligodeoxyribonucleotidase activity","synonyms":[{"name":"DNA oligonucleotidase activity","type":"exact"}],"termid":"GO:0034610"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PBO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf29","termid":"PBO:0004561"}


id: PBO:0087661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Npr2p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and resulting in inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; homolog of human tumor suppressor NPRL2","termid":"PBO:0087661"}


id: MONDO:0009455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency, partial combined, with absence of HLA Determinants and beta-2-microglobulin from lymphocytes (obsolete MONDO:0009455)","secondary_identifiers":["OMIM:242870","MESH:C565468"],"synonyms":[{"name":"immunodeficiency, partial combined, with absence of HLA Determinants and beta-2-microglobulin from lymphocytes","type":"exact"}],"termid":"MONDO:0009455","xrefs":{"Monarch":{"xref_id":"0009455"}}}


id: MONDO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm characterized by a papillary growth pattern and a proliferation of neoplastic squamous cells without morphologic evidence of malignancy. Most frequently it arises in the oral cavity, nasopharynx, larynx, esophagus, vagina, and vulva.","definition_xrefs":["NCIT:C3712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous papilloma","secondary_identifiers":["MEDGEN:61470","DOID:139","ICDO:8052/0","UMLS:C0205874","EFO:1001970"],"synonyms":[{"name":"epidermoid cell papilloma","type":"exact"},{"name":"epidermoid papilloma","type":"exact"},{"name":"keratotic papilloma","type":"exact"},{"name":"papilloma, squamous cell, benign","type":"exact"},{"name":"squamous cell papilloma","type":"exact"},{"name":"squamous cell papilloma (morphologic abnormality)","type":"exact"},{"name":"squamous papilloma","type":"exact"}],"termid":"MONDO:0001825","xrefs":{"Monarch":{"xref_id":"0001825"}}}


id: GO:1900785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving naphtho-gamma-pyrone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"naphtho-gamma-pyrone metabolic process","synonyms":[{"name":"naphtho-gamma-pyrone metabolism","type":"exact"},{"name":"naphtho-gamma-pyrones metabolic process","type":"related"},{"name":"naphtho-gamma-pyrones metabolism","type":"related"}],"termid":"GO:1900785"}


id: PBO:0109628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1L (pseudogene)","termid":"PBO:0109628"}


id: PBO:0069887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1176, pseudogene","termid":"PBO:0069887"}


id: MONDO:0016297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetically highly heterogeneous otorhinolaryngologic disease, resulting from inner and/or middle ear or hearing nerve anomalies, typically characterized by bilateral, severe to profound hearing loss (mean sensorineural hearing impairment of 60 dB or more for 500-, 1,000-, and 2,000-Hz frequency tones in the better ear) which occurs before the onset of speech development and is not associated with visible external ear abnormalities or any other medical problems. It is usually nonprogressive and impedes oral language acquisition.","definition_xrefs":["Orphanet:216445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"prelingual non-syndromic genetic hearing loss","secondary_identifiers":["UMLS:C4706679","SCTID:764098007","MEDGEN:1647959"],"synonyms":[{"name":"isolated prelingual genetic deafness","type":"narrow"},{"name":"prelingual non-syndromic genetic deafness","type":"narrow"},{"name":"prelingual non-syndromic genetic hearing loss","type":"exact"}],"termid":"MONDO:0016297","xrefs":{"Monarch":{"xref_id":"0016297"}}}


id: PBO:0034119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pollinated_by","termid":"PBO:0034119"}


id: PBO:0080170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 5","termid":"PBO:0080170"}


id: FYPO:0007164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of microtubule sliding, i.e. movement of one microtubule along another microtubule, is decreased.","definition_xrefs":["GO:0051012","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased microtubule sliding","termid":"FYPO:0007164"}


id: SO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 9 nucleotide recombination site (e.g. ACAAAAACC), part of a 3' D-recombination signal sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_nonamer","synonyms":[{"name":"3'D-NOMAMER","type":"exact"},{"name":"three prime D nonamer","type":"exact"}],"termid":"SO:0000494"}


id: PATO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having become firm or hard especially by increase of fibrous elements.","definition_xrefs":["mw:http://www.merriam-webster.com/dictionary/indurated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"friability","termid":"PATO:0002405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indurated","termid":"PATO:0002407"}


id: MONDO:0033658
data:
  {"annotated_genes":["SJAG_04960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86117],"is_not":false,"summary":null,"term":"MONDO:0033658"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1748227","OMIM:619072","UMLS:C5436732","GARD:18531"],"synonyms":[{"name":"NEDSEBA","type":"exact"}],"termid":"MONDO:0033658","terms_by_termid":{"MONDO:0033658":null},"xrefs":{"Monarch":{"xref_id":"0033658"}}}


id: GO:0160182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a quinol + nitrate = a quinone + H2O + nitrite.","definition_xrefs":["RHEA:56144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitrate reductase (quinone) activity","secondary_identifiers":["EC:1.7.5.1"],"synonyms":[{"name":"dissimilatory nitrate reductase","type":"related"},{"name":"dissimilatory nitrate reductase activity","type":"related"},{"name":"nitrate reductase A activity","type":"related"},{"name":"nitrate reductase Z activity","type":"related"},{"name":"quinol-nitrate oxidoreductase activity","type":"related"}],"termid":"GO:0160182"}


id: PBO:0059709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 17","termid":"PBO:0059709"}


id: PR:G2TRS4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C36.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.13","synonyms":[{"name":"Spom972h-SPBC36.13","type":"exact"}],"termid":"PR:G2TRS4"}


id: PBO:0066504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X2","termid":"PBO:0066504"}


id: PBO:0061525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal vesicle trafficking associated 1","termid":"PBO:0061525"}


id: MONDO:0012696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 4","secondary_identifiers":["OMIM:611571","DOID:0060923","MESH:C566914","MEDGEN:369916","UMLS:C1969046"],"synonyms":[{"name":"OTSC4","type":"exact"},{"name":"otosclerosis 4","type":"exact"}],"termid":"MONDO:0012696","xrefs":{"Monarch":{"xref_id":"0012696"}}}


id: PBO:0043385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calaxin","termid":"PBO:0043385"}


id: GO:0061786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A peptidoglycan endopeptidase activity that acts on a stem peptide of peptidoglycan.","definition_xrefs":["GOC:jh","GOC:dph","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"peptidoglycan stem peptide endopeptidase activity","termid":"GO:0061786"}


id: GO:0042707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into photoreceptor cell in the ocellus. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell fate commitment","termid":"GO:0042707"}


id: PBO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 6","termid":"PBO:0042993"}


id: PBO:0085413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sterol transporter of the ATP-binding cassette family; required, along with Pdr11p, for uptake of exogenous sterols and their incorporation into the plasma membrane; activity is stimulated by phosphatidylserine; sterol uptake is required for anaerobic growth because sterol biosynthesis requires oxygen; AUS1 has a paralog, PDR11, that arose from the whole genome duplication","termid":"PBO:0085413"}


id: MOD:00911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-leucine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-leucine residue","synonyms":[{"name":"ModLeu","type":"exact"}],"termid":"MOD:00911"}


id: PBO:0053544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 550","termid":"PBO:0053544"}


id: PBO:0040847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 2","termid":"PBO:0040847"}


id: PBO:0072264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 2","termid":"PBO:0072264"}


id: PBO:0051156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-36 (pseudogene)","termid":"PBO:0051156"}


id: GO:0048093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of male pigmentation","termid":"GO:0048088"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"male pigmentation","termid":"GO:0048094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male pigmentation","synonyms":[{"name":"activation of male pigmentation","type":"narrow"},{"name":"stimulation of male pigmentation","type":"narrow"},{"name":"up regulation of male pigmentation","type":"exact"},{"name":"up-regulation of male pigmentation","type":"exact"},{"name":"upregulation of male pigmentation","type":"exact"}],"termid":"GO:0048093"}


id: MONDO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm of the prostate. It is characterized by the presence of skeletal muscle exhibiting embryonic features.","definition_xrefs":["NCIT:C5525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate rhabdomyosarcoma","termid":"MONDO:0006389"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"},{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate embryonal rhabdomyosarcoma","secondary_identifiers":["DOID:3251","MEDGEN:233873","UMLS:C1335508"],"synonyms":[{"name":"embryonal rhabdomyosarcoma (disease) of prostate gland","type":"exact"},{"name":"embryonal rhabdomyosarcoma of prostate","type":"exact"},{"name":"embryonal rhabdomyosarcoma of the prostate","type":"exact"},{"name":"prostate embryonal rhabdomyosarcoma","type":"exact"},{"name":"prostate gland embryonal rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002574","xrefs":{"Monarch":{"xref_id":"0002574"}}}


id: GO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy in B cells, a state of functional inactivation which is part of B cell tolerance induction.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte anergy","termid":"GO:0002249"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell anergy","synonyms":[{"name":"B lymphocyte anergy","type":"exact"},{"name":"B-cell anergy","type":"exact"},{"name":"B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002515"}


id: PBO:0069875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1162, pseudogene","termid":"PBO:0069875"}


id: GO:1903895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:22013210","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900102"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"negatively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"down regulation of IRE1 branch of UPR","type":"exact"},{"name":"down regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"down-regulation of IRE1 branch of UPR","type":"exact"},{"name":"down-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"downregulation of IRE1 branch of UPR","type":"exact"},{"name":"downregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"downregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"downregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"downregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"downregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"downregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"downregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"inhibition of IRE1 branch of UPR","type":"narrow"},{"name":"inhibition of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"inhibition of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1alpha unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1p unfolded protein response","type":"narrow"},{"name":"inhibition of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"inhibition of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"inhibition of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"negative regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"negative regulation of IRE1 branch of UPR","type":"exact"},{"name":"negative regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"negative regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"negative regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"negative regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"negative regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"negative regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903895"}


id: PBO:0090769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip4","termid":"PBO:0090769"}


id: MONDO:0012739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of microtia, eye coloboma, and imperforation of the nasolacrimal duct.","definition_xrefs":["Orphanet:139450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia-eye coloboma-imperforation of the nasolacrimal duct syndrome","secondary_identifiers":["GARD:10300","OMIM:611863","UMLS:C2678482","MEDGEN:394835","MESH:C567512"],"synonyms":[{"name":"Balikova-Vermeesch syndrome","type":"exact"},{"name":"microtia eye coloboma and imperforation of the nasolacrimal duct","type":"related"},{"name":"microtia with nasolacrimal duct imperforation and eye coloboma","type":"related"}],"termid":"MONDO:0012739","xrefs":{"Monarch":{"xref_id":"0012739"}}}


id: GO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-5 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-5 receptor binding","synonyms":[{"name":"IL-5","type":"narrow"},{"name":"interleukin-5 receptor ligand","type":"narrow"}],"termid":"GO:0005137"}


id: GO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["PMID:20837040","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of complement activation, lectin pathway in another organism (obsolete GO:0044641)","synonyms":[{"name":"envenomation resulting in positive regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044641"}


id: GO:0072163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium in the mesonephros over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric epithelium development","termid":"GO:0072163"}


id: PBO:0055129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2548","termid":"PBO:0055129"}


id: PBO:0065982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1F pseudogene","termid":"PBO:0065982"}


id: PR:O42916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.10 gene.","definition_xrefs":["UniProtKB:O42916","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipid acyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.10","synonyms":[{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AGPAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPAAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPCAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPEAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPLAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC16A3.10","type":"exact"},{"name":"lysophosphatidic acid acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysophosphatidylcholine acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysophosphatidylethanolamine acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42916"}


id: PBO:0054687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2096","termid":"PBO:0054687"}


id: PBO:0066347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 domain containing 1","termid":"PBO:0066347"}


id: PBO:0002938
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Uncontrolled Mitosis","termid":"PBO:0002938"}


id: GO:0035368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a selenocysteine insertion sequence (SECIS), a regulatory sequence within mRNA which directs incorporation of a selenocysteine at a stop codon (UGA) during translation.","definition_xrefs":["GOC:imk","PMID:10760958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"selenocysteine insertion sequence binding","synonyms":[{"name":"SECIS binding","type":"exact"}],"termid":"GO:0035368"}


id: GO:1902221
data:
  {"annotated_genes":["SJAG_05007","SJAG_03124","SJAG_03312","SJAG_02505","SJAG_01455","SJAG_04652","SJAG_03167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78273,98671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[74592,77557,73646,79588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[79130,77020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving erythrose 4-phosphate/phosphoenolpyruvate family amino acid.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_04652":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolism","type":"exact"}],"termid":"GO:1902221","terms_by_termid":{"GO:0000162":null,"GO:0006571":null,"GO:0009094":null}}


id: PBO:0109402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 29, pseudogene","termid":"PBO:0109402"}


id: PBO:0065653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRD divergent transcript","termid":"PBO:0065653"}


id: GO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + trans-5-O-(4-coumaroyl)-D-quinate = H2O + NADP+ + trans-5-O-caffeoyl-D-quinate.","definition_xrefs":["EC:1.14.14.96","MetaCyc:1.14.13.36-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase activity","secondary_identifiers":["RHEA:16265"],"synonyms":[{"name":"5-O-(4-coumaroyl)-D-quinate/shikimate 3'-hydroxylase activity","type":"exact"},{"name":"coumaroylquinate(coumaroylshikimate) 3'-monooxygenase activity","type":"related"},{"name":"trans-5-O-(4-coumaroyl)-D-quinate,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"}],"termid":"GO:0047083"}


id: PBO:0088765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone, gankyrin","termid":"PBO:0088765"}


id: PBO:0082472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calnexin; integral membrane ER chaperone involved in folding and quality control of glycoproteins; chaperone activity is inhibited by Mpd1p, with which Cne1p interacts; 24% identical to mammalian calnexin; Ca+ binding not yet shown in yeast","termid":"PBO:0082472"}


id: GO:0033948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing (2->1) linked beta-D-fructofuranose residues in fructans.","definition_xrefs":["EC:3.2.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"fructan beta-(2,1)-fructosidase activity","secondary_identifiers":["MetaCyc:3.2.1.153-RXN"],"synonyms":[{"name":"1-FEH II","type":"related"},{"name":"1-FEH w1","type":"related"},{"name":"1-FEH w2","type":"related"},{"name":"1-fructan exohydrolase activity","type":"related"},{"name":"beta-(2,1)-D-fructan fructohydrolase activity","type":"related"},{"name":"beta-(2,1)-fructan exohydrolase activity","type":"related"},{"name":"beta-(2,1)-linkage-specific fructan-beta-fructosidase activity","type":"related"}],"termid":"GO:0033948"}


id: MONDO:0024623
data:
  {"annotated_genes":["SJAG_03578","SJAG_00863","SJAG_00731","SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[87378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[86036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[85711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"}]},"cv_name":"mondo","definition":"Pathological processes of the ear, the nose, and the throat, also known as the ENT diseases.","definition_xrefs":["MESH:D010038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_00863":null,"SJAG_01444":null,"SJAG_03578":null},"genotype_count":0,"is_obsolete":false,"name":"otorhinolaryngologic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:232208008","NANDO:1100015","MEDGEN:583054","UMLS:C0395797","ICD9:478.19","NCIT:C118420"],"synonyms":[{"name":"ENT disease","type":"related"},{"name":"ENT diseases","type":"related"},{"name":"disease, ENT","type":"related"},{"name":"disease, otolaryngologic","type":"related"},{"name":"disease, otolaryngological","type":"related"},{"name":"disease, otorhinolaryngologic","type":"related"},{"name":"disease, otorhinolaryngological","type":"related"},{"name":"diseases, ENT","type":"related"},{"name":"diseases, otolaryngologic","type":"related"},{"name":"diseases, otolaryngological","type":"related"},{"name":"diseases, otorhinolaryngologic","type":"related"},{"name":"diseases, otorhinolaryngological","type":"related"},{"name":"ear, nose and throat disorder","type":"exact"},{"name":"ear, nose or throat disorder","type":"exact"},{"name":"ear/nose/throat disease","type":"exact"},{"name":"otolaryngologic disease","type":"related"},{"name":"otolaryngologic diseases","type":"related"},{"name":"otolaryngologic disorder","type":"exact"},{"name":"otolaryngological disease","type":"related"},{"name":"otolaryngological diseases","type":"related"},{"name":"otorhinolaryngologic disease","type":"exact"},{"name":"otorhinolaryngological disease","type":"related"},{"name":"otorhinolaryngological diseases","type":"related"}],"termid":"MONDO:0024623","terms_by_termid":{"MONDO:0009558":null,"MONDO:0013385":null,"MONDO:0030067":null,"MONDO:0044720":null},"xrefs":{"Monarch":{"xref_id":"0024623"}}}


id: GO:0000110
data:
  {"annotated_genes":["SJAG_02556","SJAG_02334","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70438,75314,76009],"is_not":false,"summary":null,"term":"GO:0000110"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses DNA damage recognition and endodeoxynuclease activities. In S. cerevisiae, it is composed of Rad1p, Rad10p, and Rad14p; in human the subunits are ERCC4/XPF, ERCC1 and XPA, respectively.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleotide-excision repair factor 1 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NEF1 complex","type":"exact"},{"name":"XPA-ERCC1-ERCC4 complex","type":"exact"}],"termid":"GO:0000110","terms_by_termid":{"GO:0000110":null}}


id: GO:1905603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["PMID:30280653","GOC:aruk","GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:22524708","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"part_of","term_name":"maintenance of blood-brain barrier","termid":"GO:0035633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood-brain barrier permeability","synonyms":[{"name":"regulation of BBB permeability","type":"exact"},{"name":"regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905603"}


id: PBO:0027940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_glucose_starvation","termid":"PBO:0027940"}


id: MONDO:0019981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral multicystic dysplastic kidney is the form of multicystic dysplastic kidney (MCDK), a congenital anomaly of the kidney and urinary tract (CAKUT), in which one kidney is large, distended by multiple cysts, and non-functional.","definition_xrefs":["Orphanet:97363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicystic dysplastic kidney","termid":"MONDO:0015988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"unilateral multicystic dysplastic kidney","secondary_identifiers":["MEDGEN:292613","GARD:19375","UMLS:C1567426"],"synonyms":[{"name":"unilateral MCDK","type":"exact"},{"name":"unilateral multicystic renal dysplasia","type":"exact"}],"termid":"MONDO:0019981","xrefs":{"Monarch":{"xref_id":"0019981"}}}


id: PBO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC1 like intracellular cholesterol transporter 1","termid":"PBO:0061299"}


id: PBO:0029324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA_during_mitotic_G2_phase","termid":"PBO:0029324"}


id: PBO:0012839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of rudimentary homolog Erh1","termid":"PBO:0012839"}


id: MONDO:0006096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endometrial hyperplasia characterized by cytologic and architectural changes which may lead to endometrial carcinoma. Despite the atypical features and possible course, there is debate on whether to consider this a neoplasm. The relationship with endometrial intraepithelial neoplasia is also unclear.","definition_xrefs":["NCIT:C4654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical endometrial hyperplasia","secondary_identifiers":["UMLS:C0349579","EFO:1000098","SCTID:277158007","MEDGEN:138105","ICD9:621.33"],"synonyms":[{"name":"atypical hyperplasia of endometrium","type":"exact"},{"name":"atypical hyperplasia of the endometrium","type":"exact"},{"name":"endometrial hyperplasia with atypia","type":"exact"}],"termid":"MONDO:0006096","xrefs":{"Monarch":{"xref_id":"0006096"}}}


id: GO:1900008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["PMID:15020466","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900008)","synonyms":[{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900008"}


id: PATO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's processing a surface free of roughness or irregularities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth","termid":"PATO:0000701"}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: PBO:0054340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1733","termid":"PBO:0054340"}


id: PBO:0090400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion transmembrane transporter","termid":"PBO:0090400"}


id: GO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a tumor cell that act to protect the cell or organism.","definition_xrefs":["ISBN:0781735149","PMID:16730260","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to tumor cell","termid":"GO:0002357"}


id: MONDO:0020360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated cryptophthalmia","termid":"MONDO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"complete cryptophthalmia","secondary_identifiers":["MEDGEN:1773866","Orphanet:98949","icd11.foundation:162797488","UMLS:C5437887","GARD:16876","DOID:0111719"],"termid":"MONDO:0020360","xrefs":{"Monarch":{"xref_id":"0020360"}}}


id: PBO:0084758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial membrane protein; coordinates expression of mitochondrially-encoded genes; may facilitate delivery of mRNA to membrane-bound translation machinery","termid":"PBO:0084758"}


id: PBO:0044390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily B member 7, pseudogene","termid":"PBO:0044390"}


id: PATO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000232 taste (obsolete PATO:0000232)","termid":"PATO:0000232"}


id: PBO:0113274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[PIN(+)] prion, named for [PSI+] INducibility; an infectious protein conformation that is generally an ordered protein aggregate","termid":"PBO:0113274"}


id: PBO:0055586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3022","termid":"PBO:0055586"}


id: PBO:0086432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; green fluorescent protein (GFP)-fusion protein localizes to the plasma membrane in a punctate pattern","termid":"PBO:0086432"}


id: PBO:0079840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 family C-terminal like","termid":"PBO:0079840"}


id: GO:0030034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the parallel bundle of actin filaments at the core of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle assembly","termid":"GO:0030046"},{"relation_name":"part_of","term_name":"microvillus assembly","termid":"GO:0030033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"microvillar actin bundle assembly","termid":"GO:0030034"}


id: PBO:0073862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 1","termid":"PBO:0073862"}


id: MONDO:0006119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal marginal zone B-cell lymphoma of mucosa associated lymphoid tissue that arises from the breast as a primary tumor.","definition_xrefs":["NCIT:C35688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"breast mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["MEDGEN:234051","UMLS:C1332633"],"synonyms":[{"name":"breast MALT lymphoma","type":"exact"},{"name":"breast mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006119","xrefs":{"Monarch":{"xref_id":"0006119"}}}


id: GO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"activation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"stimulation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"up regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"up-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"upregulation of long-term neuronal synaptic plasticity","type":"exact"}],"termid":"GO:0048170"}


id: PR:O42944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh2 gene.","definition_xrefs":["UniProtKB:O42944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.09c","synonyms":[{"name":"Spom972h-omh2","type":"exact"}],"termid":"PR:O42944"}


id: PBO:0081410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 260","termid":"PBO:0081410"}


id: MONDO:0014437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS9-related ciliopathy","termid":"MONDO:0700236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 9","secondary_identifiers":["MESH:C565918","UMLS:C1859567","GARD:10208","OMIM:615986","DOID:0110131","MEDGEN:347182"],"synonyms":[{"name":"BBS9","type":"exact"},{"name":"BBS9 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 9","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS9","type":"exact"},{"name":"Bardet-Biedl syndrome type 9","type":"exact"}],"termid":"MONDO:0014437","xrefs":{"Monarch":{"xref_id":"0014437"}}}


id: PBO:0017782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid8 (predicted)","termid":"PBO:0017782"}


id: PBO:0079846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone A","termid":"PBO:0079846"}


id: PBO:0067965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 267","termid":"PBO:0067965"}


id: MONDO:0014824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete craniofacial dysplasia-short stature-ectodermal anomalies-intellectual disability syndrome (obsolete MONDO:0014824)","termid":"MONDO:0014824","xrefs":{"Monarch":{"xref_id":"0014824"}}}


id: GO:0010367
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in animals are localized in the extracellular space.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoamylase complex","termid":"GO:0043033"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular isoamylase complex","termid":"GO:0010367"}


id: MONDO:0018693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete kuru (obsolete MONDO:0018693)","termid":"MONDO:0018693","xrefs":{"Monarch":{"xref_id":"0018693"}}}


id: SO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000761 phagemid_clone (obsolete SO:0000761)","termid":"SO:0000761"}


id: GO:0018677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pentachlorophenol + NADPH + H+ + O2 = tetrachlorohydroquinone + NADP+ + chloride.","definition_xrefs":["EC:1.14.13.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pentachlorophenol monooxygenase activity","secondary_identifiers":["RHEA:18685","UM-BBD_enzymeID:r0313","MetaCyc:PCP4MONO-RXN"],"synonyms":[{"name":"PCB 4-monooxygenase activity","type":"related"},{"name":"PCB4MO activity","type":"related"},{"name":"PCP hydroxylase activity","type":"related"},{"name":"PcpB","type":"related"},{"name":"pentachlorophenol 4-monooxygenase activity","type":"exact"},{"name":"pentachlorophenol dechlorinase activity","type":"related"},{"name":"pentachlorophenol dehalogenase activity","type":"related"},{"name":"pentachlorophenol hydroxylase activity","type":"exact"},{"name":"pentachlorophenol,NADPH:oxygen oxidoreductase (hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018677"}


id: PBO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EB1 family Mal3","termid":"PBO:0001434"}


id: MONDO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally high level of estrogen.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperestrogenism (obsolete MONDO:0001946)","secondary_identifiers":["NANDO:2200379","DOID:14336","ICD10CM:E28.0","ICD9:256.0","ICD10WHO:E28.0","SCTID:37295009"],"synonyms":[{"name":"estrogen Excess","type":"related"},{"name":"hyperestrogenism","type":"exact"}],"termid":"MONDO:0001946","xrefs":{"Monarch":{"xref_id":"0001946"}}}


id: GO:0010646
data:
  {"annotated_genes":["SJAG_03453","SJAG_03974","SJAG_04522","SJAG_05000","SJAG_03353","SJAG_03355","SJAG_03263","SJAG_02451","SJAG_01790","SJAG_01587","SJAG_02233","SJAG_06621","SJAG_06592","SJAG_06270","SJAG_04455","SJAG_01032","SJAG_01181","SJAG_00845","SJAG_03405","SJAG_04462","SJAG_00169","SJAG_04329","SJAG_03631","SJAG_01787","SJAG_02336","SJAG_01114","SJAG_00143","SJAG_02379","SJAG_04249","SJAG_04943","SJAG_01679","SJAG_03486","SJAG_04496","SJAG_05346","SJAG_03828","SJAG_05184","SJAG_02605","SJAG_03508","SJAG_02514","SJAG_04666","SJAG_02169","SJAG_00289","SJAG_01187","SJAG_03327","SJAG_00561","SJAG_03928","SJAG_03705","SJAG_03907","SJAG_02481","SJAG_00600","SJAG_03072","SJAG_01142","SJAG_01464","SJAG_02000","SJAG_03678","SJAG_03936","SJAG_04825","SJAG_03799","SJAG_04776","SJAG_00990","SJAG_03089","SJAG_00688","SJAG_01805","SJAG_01885","SJAG_01978","SJAG_03681","SJAG_02013","SJAG_03592","SJAG_00293","SJAG_00975","SJAG_00027","SJAG_02183","SJAG_00078","SJAG_00526","SJAG_00229","SJAG_00824","SJAG_00883","SJAG_00082","SJAG_00991","SJAG_02486","SJAG_00209","SJAG_01386","SJAG_00875","SJAG_02858","SJAG_00266","SJAG_03903","SJAG_03371","SJAG_03501","SJAG_00457","SJAG_01837","SJAG_00610","SJAG_00318","SJAG_01199","SJAG_00424","SJAG_04910","SJAG_02135","SJAG_04551","SJAG_03126","SJAG_02424","SJAG_03488","SJAG_02945","SJAG_03185","SJAG_01253","SJAG_04235","SJAG_06588","SJAG_06622","SJAG_02426","SJAG_02392","SJAG_02231","SJAG_04259","SJAG_02878","SJAG_02311","SJAG_00781","SJAG_03048","SJAG_03893","SJAG_01184","SJAG_03969","SJAG_00642","SJAG_01297","SJAG_01245","SJAG_02765","SJAG_01150","SJAG_05030","SJAG_01983","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104211,112269,114087,116202,107548,99914,114574,108568,91061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[116682,108284,100762,93091,92426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[101316,116430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[99765,104119,107365,96184,118617,107926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[102462,103159,89777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[94536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[92001,95369,96304,99767,117378,118618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[107454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[93667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[72516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[71917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[99916,91065,101596,92070,110480,93268,107856,95971,105364,107415,73128,93184,93802,107550,116205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[106220,91577,112021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[73526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[105455,93673,109983,116431,118340,96430,88364,73938,73959,80294,113465,107466,116783,118532,109580,103328,99202,101773,114282,114882,117342,99898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[116576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[111291,102465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[88426,92756,89778,118208,91106,103160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[114092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[116975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[118584,112789,109256,109255,109258,117671,109254,112131,109257,109252,95591,109253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[115890,104021,88485,114928,91187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[87880,94147,102703,110836,90343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[78725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[73402,69621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[94656,110852,96431,88652,75790,113168,74400,72890,77145,76630,76239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[91533,98074,107314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"},{"annotations":[80733,74964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043408"},{"annotations":[101659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[70251,75249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[113675,90305,104818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"},{"annotations":[115783,118097,94392,93235,108163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":125,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00078":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00561":null,"SJAG_00600":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00688":null,"SJAG_00781":null,"SJAG_00824":null,"SJAG_00845":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01199":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01587":null,"SJAG_01679":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02169":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02486":null,"SJAG_02514":null,"SJAG_02605":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03488":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03705":null,"SJAG_03799":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03928":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04496":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05346":null,"SJAG_06270":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010646","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0032007":null,"GO:0032008":null,"GO:0032483":null,"GO:0035024":null,"GO:0043408":null,"GO:0043409":null,"GO:0046580":null,"GO:0050850":null,"GO:0062038":null,"GO:0090029":null,"GO:0090267":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1900745":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903139":null,"GO:1903432":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null,"GO:1905325":null,"GO:1905326":null,"GO:2000639":null,"GO:2000640":null}}


id: PBO:0114318
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing, 10AA, ~10 copies","termid":"PBO:0114318"}


id: MONDO:0023188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Freiberg's disease is rare condition that primarily affects the second or third metatarsal (the long bones of the foot). Although people of all ages can be affected by this condition, Freiberg's disease is most commonly diagnosed during adolescence through the second decade of life. Common signs and symptoms include pain and stiffness in the front of the foot, which often leads to a limp. Affected people may also experience swelling, limited range of motion, and tenderness of the affected foot. Symptoms are generally triggered by weight-bearing activities, including walking. The exact underlying cause of Freiberg's disease is currently unknown. Treatment depends on many factors, including the severity of condition; the signs and symptoms present; and the age of the patient.","definition_xrefs":["GARD:0002380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteochondritis of tarsal/metatarsal bone","termid":"MONDO:0016086"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Freiberg disease","secondary_identifiers":["SCTID:28466007","GARD:2380","MESH:C535636","icd11.foundation:74359553","MEDGEN:75532","Orphanet:564003","UMLS:C0264099"],"synonyms":[{"name":"Freiberg's disease","type":"exact"},{"name":"Freiberg's infraction","type":"related"},{"name":"Freiberg-Kohler syndrome","type":"related"},{"name":"Kohler's second disease","type":"related"},{"name":"Osteochondrosis of the metatarsal head, usually the second","type":"related"},{"name":"second metatarsal osteochondrosis","type":"related"}],"termid":"MONDO:0023188","xrefs":{"Monarch":{"xref_id":"0023188"}}}


id: PBO:0056818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 11","termid":"PBO:0056818"}


id: PBO:0054843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2257","termid":"PBO:0054843"}


id: GO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the periphery, in this case, any location in the body other than the thymus.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral T cell tolerance induction","synonyms":[{"name":"peripheral T lymphocyte tolerance induction","type":"exact"},{"name":"peripheral T-cell tolerance induction","type":"exact"},{"name":"peripheral T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002458"}


id: PBO:0049624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 27","termid":"PBO:0049624"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: PBO:0081989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 18","termid":"PBO:0081989"}


id: PBO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp1","termid":"PBO:0090411"}


id: MONDO:0005482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hypomineralisation of systemic origin of one to four permanent first molars frequently associated with affected incisors","definition_xrefs":["EFO:0005321"],"gene_count":0,"genotype_count":0,"name":"obsolete molar-incisor hypomineralization (obsolete MONDO:0005482)","secondary_identifiers":["ICD9:520.5","SCTID:698053001"],"termid":"MONDO:0005482","xrefs":{"Monarch":{"xref_id":"0005482"}}}


id: PBO:0075602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOC domain containing 1","termid":"PBO:0075602"}


id: GO:1903124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of thioredoxin peroxidase activity.","definition_xrefs":["PMID:21850687","GO_REF:0000059","GOC:TermGenie","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of thioredoxin peroxidase activity (obsolete GO:1903124)","synonyms":[{"name":"down regulation of TPx activity","type":"exact"},{"name":"down regulation of TrxPx activity","type":"exact"},{"name":"down regulation of thiol peroxidase activity","type":"exact"},{"name":"down regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"down-regulation of TPx activity","type":"exact"},{"name":"down-regulation of TrxPx activity","type":"exact"},{"name":"down-regulation of thiol peroxidase activity","type":"exact"},{"name":"down-regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"downregulation of TPx activity","type":"exact"},{"name":"downregulation of TrxPx activity","type":"exact"},{"name":"downregulation of thiol peroxidase activity","type":"exact"},{"name":"downregulation of thioredoxin peroxidase activity","type":"exact"},{"name":"inhibition of TPx activity","type":"narrow"},{"name":"inhibition of TrxPx activity","type":"narrow"},{"name":"inhibition of thiol peroxidase activity","type":"narrow"},{"name":"inhibition of thioredoxin peroxidase activity","type":"narrow"},{"name":"negative regulation of TPx activity","type":"exact"},{"name":"negative regulation of TrxPx activity","type":"exact"},{"name":"negative regulation of thiol peroxidase activity","type":"exact"}],"termid":"GO:1903124"}


id: GO:0033463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"GGA codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033463"}


id: PATO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being confined or restricted to multiple locations.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-localised","synonyms":[{"name":"multi-focal","type":"exact"}],"termid":"PATO:0001791"}


id: MONDO:0002531
data:
  {"annotated_genes":["SJAG_01111","SJAG_02855","SJAG_04213","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"},{"annotations":[87664,87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant tumor involving the skin. Representative examples of benign skin neoplasms include the benign melanocytic skin nevus, acanthoma, sebaceous adenoma, sweat gland adenoma, lipoma, hemangioma, fibroma, and benign fibrous histiocytoma. Representative examples of malignant skin neoplasms include basal cell carcinoma, squamous cell carcinoma, melanoma, and Kaposi sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_02855":null,"SJAG_03453":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:19993","SCTID:126488004","ICD9:239.2","UMLS:C0037286","DOID:3165","EFO:0004198","MESH:D012878","NCIT:C3372","ONCOTREE:SKIN"],"synonyms":[{"name":"neoplasm of skin","type":"exact"},{"name":"neoplasm of skin by site","type":"exact"},{"name":"neoplasm of the skin","type":"exact"},{"name":"neoplasm of zone of skin","type":"exact"},{"name":"skin","type":"related"},{"name":"skin benign neoplasm","type":"related"},{"name":"skin neoplasm","type":"exact"},{"name":"skin neoplasms","type":"exact"},{"name":"skin tumor","type":"exact"},{"name":"skin tumour","type":"exact"},{"name":"tumor of skin","type":"exact"},{"name":"tumor of the skin","type":"exact"},{"name":"tumor of zone of skin","type":"exact"},{"name":"tumour of skin","type":"exact"},{"name":"tumour of the skin","type":"exact"},{"name":"tumour of zone of skin","type":"exact"},{"name":"zone of skin neoplasm","type":"exact"},{"name":"zone of skin neoplasm (disease)","type":"exact"},{"name":"zone of skin tumor","type":"exact"},{"name":"zone of skin tumour","type":"exact"}],"termid":"MONDO:0002531","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0024517":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0002531"}}}


id: PATO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000538 alkali sensitivity value (obsolete PATO:0000538)","termid":"PATO:0000538"}


id: PBO:0055251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2678","termid":"PBO:0055251"}


id: PBO:0064147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKNOX2 divergent transcript","termid":"PBO:0064147"}


id: GO:0022603
data:
  {"annotated_genes":["SJAG_00855","SJAG_00333","SJAG_04522","SJAG_01212","SJAG_02392","SJAG_02169","SJAG_02838","SJAG_03486","SJAG_04322","SJAG_04666","SJAG_00610","SJAG_01456","SJAG_02022","SJAG_04509","SJAG_01799","SJAG_00216","SJAG_04724","SJAG_00514","SJAG_02222","SJAG_02536","SJAG_00236","SJAG_00028","SJAG_00304","SJAG_03705","SJAG_03637","SJAG_00661","SJAG_00596","SJAG_04461","SJAG_00845","SJAG_00244","SJAG_04203","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96180,94913,90204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[103806,111072,116780,88397,118204,100065,107172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[91064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[116606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[102366,106773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[116884,107928],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[94081,100500,105680],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[104019],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[109194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[115351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[119665,119664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[95993,94919,113354,104852,119088,91479],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[92764,106432,88243,103163],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anatomical structure morphogenesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00304":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00855":null,"SJAG_01212":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04203":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anatomical structure morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"synonyms":[{"name":"regulation of morphogenesis","type":"exact"}],"termid":"GO:0022603","terms_by_termid":{"GO:0008360":null,"GO:0010637":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061361":null,"GO:0090141":null,"GO:0090258":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal inhibitory axon guidance protein","termid":"PBO:0045459"}


id: GO:0034200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glycero-beta-D-manno-heptose 1,7-bisphosphate + H2O = D-glycero-beta-D-manno-heptose 1-phosphate + phosphate.","definition_xrefs":["RHEA:28518","PMID:11279237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase activity","secondary_identifiers":["EC:3.1.3.82","MetaCyc:RXN0-4361"],"synonyms":[{"name":"D,D-heptose 1,7-bisphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034200"}


id: PBO:0090960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase","termid":"PBO:0090960"}


id: GO:0030794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (S)-coclaurine = S-adenosyl-L-homocysteine + (S)-N-methylcoclaurine.","definition_xrefs":["EC:2.1.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"(S)-coclaurine-N-methyltransferase activity","secondary_identifiers":["RHEA:17409","MetaCyc:2.1.1.140-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-coclaurine-N-methyltransferase activity","type":"related"}],"termid":"GO:0030794"}


id: PBO:0085495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome activator; binds the core proteasome (CP) and stimulates proteasome-mediated protein degradation by inducing gate opening; required for sequestering CP into proteasome storage granule (PSG) during quiescent phase and for nuclear import of CP in proliferating cells; required for resistance to bleomycin, may be involved in protecting against oxidative damage; similar to mammalian PA200","termid":"PBO:0085495"}


id: GO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of ecdysiostatic hormone, a peptide hormone that inhibits ecdysone secretion.","definition_xrefs":["DOI:10.1002/(SICI)1520-6327(1997)35:1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0098772","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ecdysiostatic hormone activity","termid":"GO:0016087"}


id: PBO:0060324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IC","termid":"PBO:0060324"}


id: MONDO:0014165
data:
  {"annotated_genes":["SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86314],"is_not":false,"summary":null,"term":"MONDO:0014165"}]},"cv_name":"mondo","definition":"A rare congenital disorder of glycosylation characterized by neonatal hypotonia, global development delay, developmental regress and severe to profound intellectual disability, infantile onset seizures that are initially associated with febrile episodes with subsequent transition to unprovoked seizures, impaired vision with esotropia and nystagmus, progressive cerebral and cerebellar atrophy, skeletal abnormalities (including brachycephaly, scoliosis, slender long bones, delayed bone age, pectus excavatum and osteopenia), inverted nipples and dysmorphic features including high and narrow forehead, frontal bossing, short nose, depressed nasal bridge, anteverted nares, high palate and wide open mouth consistent with facial hypotonia. Other features may include cardiac abnormalities (such as patent ductus arteriosus, atrial septal defects), urogenital abnormalities (such as nephrocalcinosis, urolithiasis), and low plasma concentration of alkaline phosphatase.","definition_xrefs":["Orphanet:369837"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete slender bone dysplasia (obsolete MONDO:0019699)","termid":"MONDO:0019699"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"multiple congenital anomalies-hypotonia-seizures syndrome","termid":"MONDO:0100247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"multiple congenital anomalies-hypotonia-seizures syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080140","GARD:17584","UMLS:C3809356","MESH:C566367","MEDGEN:815686","OMIM:603530","OMIM:615398"],"synonyms":[{"name":"LFSS","type":"exact"},{"name":"M syndrome","type":"related"},{"name":"MCAHS type 3","type":"exact"},{"name":"MCAHS3","type":"related"},{"name":"PIGT multiple congenital anomalies/dysmorphic syndrome-intellectual disability","type":"exact"},{"name":"PIGT-CDG","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGT deficiency","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 7","type":"related"},{"name":"intellectual disability-seizures-hypotonia-ophthalmologic-skeletal anomalies syndrome","type":"related"},{"name":"light fixation seizure syndrome","type":"exact"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome 3","type":"exact"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome type 3","type":"exact"},{"name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability caused by mutation in PIGT","type":"exact"}],"termid":"MONDO:0014165","terms_by_termid":{"MONDO:0014165":null},"xrefs":{"Monarch":{"xref_id":"0014165"}}}


id: MONDO:0025102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of Old World and New World monkeys. This term includes diseases of baboons but not of chimpanzees or gorillas (= ape diseases).","definition_xrefs":["MESH:D008992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human primate disease","termid":"MONDO:0025013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monkey disease","synonyms":[{"name":"disease, monkey","type":"related"},{"name":"diseases, monkey","type":"related"},{"name":"monkey disease","type":"exact"}],"termid":"MONDO:0025102","xrefs":{"Monarch":{"xref_id":"0025102"}}}


id: PATO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001228 dull (obsolete PATO:0001228)","termid":"PATO:0001228"}


id: PBO:0088951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon-exon junction complex disassembly factor, human partner of Y14 and mago ortholog","termid":"PBO:0088951"}


id: MONDO:0018416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 59","secondary_identifiers":["UMLS:C4750857","MEDGEN:1669596","GARD:21695","Orphanet:401795"],"synonyms":[{"name":"SPG59","type":"exact"}],"termid":"MONDO:0018416","xrefs":{"Monarch":{"xref_id":"0018416"}}}


id: GO:1990168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K33-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 33 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["PMID:23827681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K33-linked deubiquitination","termid":"GO:1990168"}


id: MONDO:0100057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subset of exercise-induced anaphylaxis in which symptoms develop if exertion takes place within a few hours of eating a specific food. In the case of food-dependent exercise-induced anaphylaxis, neither the food nor the exercise alone is enough to cause anaphylaxis.","definition_xrefs":["GARD:0006392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exercise-induced anaphylaxis","termid":"MONDO:0100056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"food-dependent exercise-induced anaphylaxis","secondary_identifiers":["MEDGEN:1780757","icd11.foundation:854135859","UMLS:C5546138"],"termid":"MONDO:0100057","xrefs":{"Monarch":{"xref_id":"0100057"}}}


id: PBO:0055298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2725","termid":"PBO:0055298"}


id: GO:0039620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=7 symmetry. The T=7 capsid is composed of 12 pentameric and 60 hexameric capsomeres.","definition_xrefs":["VZ:804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=7 icosahedral viral capsid","termid":"GO:0039620"}


id: GO:1904270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pyroptosome complex.","definition_xrefs":["GOC:TermGenie","PMID:17964261","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"pyroptosome complex assembly","synonyms":[{"name":"ASC pyroptosome assembly","type":"exact"},{"name":"ASC pyroptosome formation","type":"exact"},{"name":"pyroptosome complex formation","type":"exact"}],"termid":"GO:1904270"}


id: PBO:0076365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 2","termid":"PBO:0076365"}


id: GO:0060433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a bronchus from an initial condition to its mature state. This process begins with the formation of the bronchus and ends with the mature structure. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus development","termid":"GO:0060433"}


id: PBO:0066321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: MOD:01829
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxymethyl-L-cysteine sulfoxide.","definition_xrefs":["PubMed:17689096","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxymethyl-L-cysteine","termid":"MOD:01061"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxymethyl-L-cysteine sulfoxide","synonyms":[{"name":"CmCO","type":"exact"}],"termid":"MOD:01829"}


id: GO:0051631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine uptake","synonyms":[{"name":"regulation of acetylcholine import","type":"exact"}],"termid":"GO:0051631"}


id: PBO:0043337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN6 transmembrane ER protein","termid":"PBO:0043337"}


id: PBO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved gene with no initiator methionine","termid":"PBO:0002367"}


id: GO:0034885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-N-formylaminovinylacetate + H2O = gamma-aminovinylacetate + HCOOH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-N-formylaminovinylacetate hydrolase activity (obsolete GO:0034885)","termid":"GO:0034885"}


id: PBO:0052312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0753","termid":"PBO:0052312"}


id: FYPO:0002803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["PomBase:mah","GO:0007033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole organization","synonyms":[{"name":"abnormal vacuolar organisation","type":"exact"},{"name":"abnormal vacuolar organization","type":"exact"},{"name":"abnormal vacuole organisation","type":"exact"}],"termid":"FYPO:0002803"}


id: PBO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate kinase (predicted)","termid":"PBO:0000593"}


id: MONDO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in the lung due to exposure to asbestos.","definition_xrefs":["NCIT:C27925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"asbestos-related lung carcinoma","secondary_identifiers":["UMLS:C1332337","DOID:7596","MEDGEN:231080"],"synonyms":[{"name":"asbestos-related lung cancer","type":"exact"},{"name":"asbestos-related lung carcinoma","type":"exact"}],"termid":"MONDO:0004295","xrefs":{"Monarch":{"xref_id":"0004295"}}}


id: PBO:0086473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; DPC25 is not an essential gene","termid":"PBO:0086473"}


id: PBO:0077385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 126A","termid":"PBO:0077385"}


id: GO:0031983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane or protein that forms a vesicle.","definition_xrefs":["GOC:vesicles","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"vesicle","termid":"GO:0031982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vesicle lumen","secondary_identifiers":["NIF_Subcellular:sao797538226"],"termid":"GO:0031983"}


id: PBO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php3","termid":"PBO:0001367"}


id: PBO:0029351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydroxyurea","termid":"PBO:0029351"}


id: RO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"}


id: SO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group III introns are introns found in the mRNA of the plastids of euglenoid protists. They are spliced by a two step transesterification with bulged adenosine as initiating nucleophile.","definition_xrefs":["PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_III_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_III_intron"],"synonyms":[{"name":"group III intron","type":"exact"}],"termid":"SO:0001213"}


id: GO:0044521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant muscle damage in the bitten organism.","definition_xrefs":["PMID:10620318","GOC:jl","PMID:21150580","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation perturbing biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in muscle damage in another organism","synonyms":[{"name":"envenomation resulting in muscle damage in other organism","type":"exact"}],"termid":"GO:0044521"}


id: GO:1905406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic cohesin loading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic cohesin loading (obsolete GO:1905406)","termid":"GO:1905406"}


id: GO:0075216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of spore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"modulation of spore encystment on host","termid":"GO:0075215"},{"relation_name":"positively_regulates","term_name":"spore encystment","termid":"GO:0075214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spore encystment on host","termid":"GO:0075216"}


id: PBO:0048119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUS RNA binding protein","termid":"PBO:0048119"}


id: FYPO:0001961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA topoisomerase II activity","termid":"FYPO:0001960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA topoisomerase II activity","synonyms":[{"name":"decreased DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"},{"name":"reduced DNA topoisomerase II activity","type":"exact"}],"termid":"FYPO:0001961"}


id: MONDO:0010897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD3 on chromosome 6p23.","definition_xrefs":["DOID:0070079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 3","secondary_identifiers":["MEDGEN:324936","UMLS:C1838069","OMIM:600511"],"synonyms":[{"name":"SCZD3","type":"exact"},{"name":"schizophrenia 3","type":"exact"},{"name":"schizophrenia 3 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 6-related","type":"related"}],"termid":"MONDO:0010897","xrefs":{"Monarch":{"xref_id":"0010897"}}}


id: PBO:0026965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth_during_phosphate_starvation","termid":"PBO:0026965"}


id: MOD:00915
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-proline residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-proline residue","synonyms":[{"name":"ModPro","type":"exact"}],"termid":"MOD:00915"}


id: MOD:01146
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(6-FAD)-L-cystine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(6-FAD)-L-cysteine","synonyms":[{"name":"FAD","type":"related"},{"name":"S6FADCys","type":"exact"}],"termid":"MOD:01146"}


id: PBO:0039459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD10 intronic transcript 1","termid":"PBO:0039459"}


id: GO:0160245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of sulfite. These include transport of sulfite away from sensitive areas and to compartments or complexes whose purpose is sequestration of sulfite.","definition_xrefs":["PMID:30859719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of sulfite","synonyms":[{"name":"sulfite detoxification","type":"exact"}],"termid":"GO:0160245"}


id: MONDO:0033091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, congenital, autosomal recessive 14","secondary_identifiers":["UMLS:C4539754","GARD:16471","OMIM:617571","DOID:0080258","MEDGEN:1620129"],"synonyms":[{"name":"ARCI14","type":"related"},{"name":"autosomal recessive congenital ichthyosis 14","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 14","type":"exact"}],"termid":"MONDO:0033091","xrefs":{"Monarch":{"xref_id":"0033091"}}}


id: MONDO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 58","secondary_identifiers":["UMLS:C5562008","DOID:0112352","MEDGEN:1794218","OMIM:619585"],"synonyms":[{"name":"SPGF58","type":"exact"}],"termid":"MONDO:0030463","xrefs":{"Monarch":{"xref_id":"0030463"}}}


id: MONDO:0011335
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86034],"is_not":false,"summary":null,"term":"MONDO:0011335"}]},"cv_name":"mondo","definition":"A rare disorder caused by mutation in the KIF22 gene. It is characterized by short stature, midface retrusion, progressive knee malalignment, generalized ligamentous laxity, and mild spinal deformity.","definition_xrefs":["NCIT:C125419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with multiple dislocations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1863732","MEDGEN:350960","SCTID:766820007","MESH:C535784","Orphanet:93360","OMIM:603546","DOID:0112199","GARD:9866"],"synonyms":[{"name":"SEMD-MD","type":"exact"},{"name":"SEMDJL2","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, Hall type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, leptodactylic type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxicity, Hall type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity type 2","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, leptodactylic type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations Hall type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations leptodactylic type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations, Hall type","type":"exact"}],"termid":"MONDO:0011335","terms_by_termid":{"MONDO:0011335":null},"xrefs":{"Monarch":{"xref_id":"0011335"}}}


id: PBO:0052605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kaptin, actin binding protein","termid":"PBO:0052605"}


id: PBO:0028549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_phosphate_starvation","termid":"PBO:0028549"}


id: PBO:0065598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 14","termid":"PBO:0065598"}


id: MONDO:0015518
data:
  {"annotated_genes":["SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"}]},"cv_name":"mondo","definition":"Several syndromes of bilateral symmetric spongy degeneration of the caudate nucleaus, putamen and globus pallidus characterized by developmental regression, choreoathetosis and dystonia progressing to spastic quadriparesis. IBSN can be familial or sporadic.","definition_xrefs":["Orphanet:1576"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic syndromic intellectual disability (obsolete MONDO:0015983)","termid":"MONDO:0015983"},{"relation_name":"excluded_subClassOf","term_name":"obsolete miscellaneous movement disorder due to neurodegenerative disease (obsolete MONDO:0017641)","termid":"MONDO:0017641"},{"relation_name":"excluded_subClassOf","term_name":"obsolete miscellaneous movement disorder due to genetic neurodegenerative disease (obsolete MONDO:0017662)","termid":"MONDO:0017662"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"infantile bilateral striatal necrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5040","NANDO:2100242","NANDO:2200888","MEDGEN:167090","icd11.foundation:1947032348","ICD10CM:G23.2","SCTID:718174008","UMLS:C0795996"],"synonyms":[{"name":"IBSN","type":"exact"},{"name":"SNDI","type":"related"},{"name":"infantile bilateral striatal necrosis","type":"exact"},{"name":"infantile striatonigral degeneration","type":"exact"},{"name":"infantile striatonigral necrosis","type":"exact"},{"name":"striatal degeneration familial","type":"related"},{"name":"striatonigral degeneration infantile","type":"related"}],"termid":"MONDO:0015518","terms_by_termid":{"MONDO:0010080":null},"xrefs":{"Monarch":{"xref_id":"0015518"}}}


id: PBO:0075905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA5 divergent transcript","termid":"PBO:0075905"}


id: PBO:0042607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 7","termid":"PBO:0042607"}


id: MONDO:0022872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis X-linked recessive","termid":"MONDO:0022872","xrefs":{"Monarch":{"xref_id":"0022872"}}}


id: PBO:0068664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 45, pseudogene","termid":"PBO:0068664"}


id: PBO:0013475
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses chk1delta sensitivity to UV and hydroxyurea","termid":"PBO:0013475"}


id: PBO:0076829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEPSIN adaptor related protein complex 4 accessory protein","termid":"PBO:0076829"}


id: PBO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AlkylTransferase-Like","termid":"PBO:0034748"}


id: SO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specialized region in the genomes of some yeast and fungi, the genes of which regulate mating type.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Mating-type_region"],"synonyms":[{"name":"mating type region","type":"exact"}],"termid":"SO:0001789"}


id: PBO:0113116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in endocytosis and autophagy; homologous to Chediak-Higashi syndrome and Beige proteins, both of which are implicated in disease syndromes in human and mouse, respectively, due to defective lysosomal trafficking; mutant phenotype and genetic interactions suggest a role in protein sorting","termid":"PBO:0113116"}


id: PBO:0071422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 28","termid":"PBO:0071422"}


id: GO:0006997
data:
  {"annotated_genes":["SJAG_03073","SJAG_04489","SJAG_00680","SJAG_01370","SJAG_03219","SJAG_03892","SJAG_03592","SJAG_01613","SJAG_01460","SJAG_01906","SJAG_01745","SJAG_00840","SJAG_02763","SJAG_01356","SJAG_04936","SJAG_01834","SJAG_01242","SJAG_01422","SJAG_01467","SJAG_03200","SJAG_03593","SJAG_04972","SJAG_03982","SJAG_01075","SJAG_04039","SJAG_02210","SJAG_03844","SJAG_03891","SJAG_01579","SJAG_02778","SJAG_03182","SJAG_04578","SJAG_04464","SJAG_03783","SJAG_03940","SJAG_05207","SJAG_03491","SJAG_04319","SJAG_02737","SJAG_04271","SJAG_04883","SJAG_01833","SJAG_00900","SJAG_03313","SJAG_02045","SJAG_02286","SJAG_01050","SJAG_00810","SJAG_00934","SJAG_03449","SJAG_04509","SJAG_00416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91333,99546,117244,88102,78994,91724,111773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000742"},{"annotations":[94176,101759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[88237,110221,93398,98013,110635,98683],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[110773],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007077"},{"annotations":[119413,119877,119923],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[91682,106880,103463,101211,119693,96296,98285,119692,119694,119695],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[103981],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0140516"},{"annotations":[92071,119882,113055,78541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006998"},{"annotations":[70946,91683],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071765"},{"annotations":[78995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[103777,108035,110039,119723,92283],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071763"},{"annotations":[72524],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"},{"annotations":[108079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"},{"annotations":[80691,74419,76462,77333,76752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006999"},{"annotations":[113603,71176,72555,104410,108474,112417,92412],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000183"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.","definition_xrefs":["GOC:jl","GOC:dph","GOC:ems","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00900":null,"SJAG_00934":null,"SJAG_01050":null,"SJAG_01075":null,"SJAG_01242":null,"SJAG_01356":null,"SJAG_01370":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01467":null,"SJAG_01579":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_01906":null,"SJAG_02045":null,"SJAG_02210":null,"SJAG_02286":null,"SJAG_02737":null,"SJAG_02763":null,"SJAG_02778":null,"SJAG_03073":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03592":null,"SJAG_03593":null,"SJAG_03783":null,"SJAG_03844":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_03982":null,"SJAG_04039":null,"SJAG_04271":null,"SJAG_04319":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04578":null,"SJAG_04883":null,"SJAG_04936":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32243490":null},"secondary_identifiers":["GO:0048287"],"synonyms":[{"name":"nuclear morphology","type":"related"},{"name":"nuclear organisation","type":"exact"},{"name":"nuclear organization","type":"exact"},{"name":"nuclear organization and biogenesis","type":"related"},{"name":"nucleus organization and biogenesis","type":"related"}],"termid":"GO:0006997","terms_by_termid":{"GO:0000183":null,"GO:0000742":null,"GO:0006998":null,"GO:0006999":null,"GO:0007077":null,"GO:0007084":null,"GO:0031468":null,"GO:0048288":null,"GO:0051292":null,"GO:0071763":null,"GO:0071765":null,"GO:0101024":null,"GO:0101026":null,"GO:0140515":null,"GO:0140516":null}}


id: PBO:0068176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 483","termid":"PBO:0068176"}


id: MONDO:0011949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thai symphalangism syndrome","secondary_identifiers":["MESH:C564303","OMIM:608028","MEDGEN:374990","UMLS:C1842679"],"synonyms":[{"name":"Thai symphalangism syndrome","type":"exact"}],"termid":"MONDO:0011949","xrefs":{"Monarch":{"xref_id":"0011949"}}}


id: PBO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0052058"}


id: GO:0008343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Feeding behavior in a fully developed and mature organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult feeding behavior","synonyms":[{"name":"adult feeding behaviour","type":"exact"}],"termid":"GO:0008343"}


id: MONDO:0005956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A plague in which the bacteria have entered the bloodstream.","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"plague","termid":"MONDO:0019095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"septicemic plague","secondary_identifiers":["ICD9:020.2","MEDGEN:56296","UMLS:C0152936","DOID:3481","SCTID:9012003","ICD10CM:A20.7"],"termid":"MONDO:0005956","xrefs":{"Monarch":{"xref_id":"0005956"}}}


id: PATO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a substance by virtue of the ease with which the substance can be changed from a solid to a liquid state especially by the application of heat.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meltability","termid":"PATO:0002199"}


id: GO:0033991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 1,5-anhydro-D-fructose = 2-hydroxy-2-(hydroxymethyl)-2H-pyran-3(6H)-one + H2O; (1a) 1,5-anhydro-D-fructose = 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose + H2O and (1b) 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose = 2-hydroxy-2-(hydroxymethyl)-2H-pyran-3(6H)-one.","definition_xrefs":["EC:4.2.1.110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldos-2-ulose dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14306","RHEA:12100"],"synonyms":[{"name":"1,5-anhydro-D-fructose dehydratase (microthecin-forming) activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase (microthecin-forming) activity","type":"related"},{"name":"AUDH","type":"related"},{"name":"pyranosone dehydratase activity","type":"related"}],"termid":"GO:0033991"}


id: MOD:01432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4S)-4,5-dihydroxyleucine.","definition_xrefs":["PubMed:3718926","ChEBI:141819","RESID:AA0446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4S)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01432"}


id: GO:1903078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:rl","PMID:11602640","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell periphery","termid":"GO:1904377"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to plasma membrane","secondary_identifiers":["GO:1905965","GO:0090004"],"synonyms":[{"name":"activation of protein localisation in plasma membrane","type":"narrow"},{"name":"activation of protein localization in plasma membrane","type":"narrow"},{"name":"activation of protein localization to plasma membrane","type":"narrow"},{"name":"activation of protein targeting to plasma membrane","type":"narrow"},{"name":"activation of protein-plasma membrane targeting","type":"narrow"},{"name":"positive regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"positive regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"positive regulation of protein localisation in plasma membrane","type":"exact"},{"name":"positive regulation of protein localization in plasma membrane","type":"exact"},{"name":"positive regulation of protein targeting to plasma membrane","type":"related"},{"name":"positive regulation of protein-plasma membrane targeting","type":"related"},{"name":"up regulation of protein localisation in plasma membrane","type":"exact"},{"name":"up regulation of protein localization in plasma membrane","type":"exact"},{"name":"up regulation of protein localization to plasma membrane","type":"exact"},{"name":"up regulation of protein targeting to plasma membrane","type":"related"},{"name":"up regulation of protein-plasma membrane targeting","type":"related"},{"name":"up-regulation of protein localisation in plasma membrane","type":"exact"},{"name":"up-regulation of protein localization in plasma membrane","type":"exact"},{"name":"up-regulation of protein localization to plasma membrane","type":"exact"},{"name":"up-regulation of protein targeting to plasma membrane","type":"related"},{"name":"up-regulation of protein-plasma membrane targeting","type":"related"},{"name":"upregulation of protein localisation in plasma membrane","type":"exact"},{"name":"upregulation of protein localization in plasma membrane","type":"exact"},{"name":"upregulation of protein localization to plasma membrane","type":"exact"},{"name":"upregulation of protein targeting to plasma membrane","type":"related"},{"name":"upregulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903078"}


id: MONDO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low grade ependymoma","secondary_identifiers":["Orphanet:251633","icd11.foundation:641455939"],"termid":"MONDO:0016697","xrefs":{"Monarch":{"xref_id":"0016697"}}}


id: PR:O74432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Golgi to ER traffic protein 4 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04374","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER traffic protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.12c","secondary_identifiers":["UniProtKB:O74432"],"synonyms":[{"name":"Spom972h-GET4","type":"exact"}],"termid":"PR:O74432"}


id: FYPO:0008045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than four nuclei, is longer than normal, and has a greater length:diameter ratio than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PBO:0079097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (GTA) 10-1","termid":"PBO:0079097"}


id: MONDO:0019323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus erythematosus is a rare superficial pemphigus disease characterized clinically by well-demarcated, localized, erythematous, scaly, hyperkeratotic, crusted plaques, with frequent butterfly distribution over the malar area of the face (but also commonly involving trunk and scalp, and less frequently the extremities, with a photoexposed distribution). Histologically, granular deposits along the dermal-epidermal junction, in addition to intercellular deposition in the upper epidermis, are observed.","definition_xrefs":["Orphanet:79480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pemphigus erythematosus","secondary_identifiers":["GARD:19022","icd11.foundation:399813106","MEDGEN:537812","UMLS:C0263312","MedDRA:10058917","SCTID:36739006","NANDO:1200233","EFO:0008603","ICD10CM:L10.4"],"synonyms":[{"name":"Senear-Usher syndrome","type":"exact"},{"name":"seborrheic pemphigus","type":"exact"}],"termid":"MONDO:0019323","xrefs":{"Monarch":{"xref_id":"0019323"}}}


id: PBO:0043470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 2","termid":"PBO:0043470"}


id: MONDO:0032932
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85854],"is_not":false,"summary":null,"term":"MONDO:0032932"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1713890","UMLS:C5394140","DOID:0070449","OMIM:618811"],"synonyms":[{"name":"MITOCHONDRIAL DNA DEPLETION SYNDROME 18","type":"related"},{"name":"MTDPS18","type":"related"}],"termid":"MONDO:0032932","terms_by_termid":{"MONDO:0032932":null},"xrefs":{"Monarch":{"xref_id":"0032932"}}}


id: MONDO:0957463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary bone and joint tuberculosis","secondary_identifiers":["Orphanet:645822","MEDGEN:1843400","UMLS:C5816705"],"termid":"MONDO:0957463","xrefs":{"Monarch":{"xref_id":"0957463"}}}


id: GO:0047631
data:
  {"annotated_genes":["SJAG_03977"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74342],"is_not":false,"summary":null,"term":"GO:0047631"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate.","definition_xrefs":["EC:3.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ADP-ribose diphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-1441","RHEA:10412","Reactome:R-HSA-2393954","Reactome:R-HSA-2393939","Reactome:R-HSA-5696049"],"synonyms":[{"name":"ADP-ribose phosphohydrolase activity","type":"exact"},{"name":"ADP-ribose pyrophosphatase activity","type":"exact"},{"name":"ADP-ribose ribophosphohydrolase activity","type":"related"},{"name":"ADPR-PPase activity","type":"exact"},{"name":"ADPribose diphosphatase activity","type":"related"},{"name":"ADPribose pyrophosphatase activity","type":"related"},{"name":"adenosine diphosphoribose pyrophosphatase activity","type":"exact"}],"termid":"GO:0047631","terms_by_termid":{"GO:0047631":null}}


id: GO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar ribonucleoprotein (obsolete GO:0030355)","synonyms":[{"name":"small nucleolar ribonucleoprotein","type":"exact"},{"name":"snoRNP","type":"exact"}],"termid":"GO:0030355"}


id: MONDO:0007071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenocortical hypofunction, chronic primary congenital","secondary_identifiers":["OMIM:103230","GARD:15033","MESH:C562711","SCTID:12427005","ICD9:255.41","UMLS:C0271740","MEDGEN:78784"],"synonyms":[{"name":"Addison disease, congenital","type":"related"},{"name":"adrenocortical hypofunction, chronic primary congenital","type":"exact"}],"termid":"MONDO:0007071","xrefs":{"Monarch":{"xref_id":"0007071"}}}


id: PBO:0089348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sorting and assembly machinery complex subunit Sam50","termid":"PBO:0089348"}


id: MONDO:0008644
data:
  {"annotated_genes":["SJAG_02317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87484],"is_not":false,"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","definition":"A chromosomal disease that has material basis in deletion polymorphisms at chromosome location 22q11 and is characterized by variable developmental problems and schizoid features.","definition_xrefs":["DOID:12583","PMID:PMID%3A+19243607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320","MONDO:0005267"],"is_obsolete":false,"name":"velocardiofacial syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:65085","UMLS:C0220704","NANDO:1200339","ICD9:758.32","MESH:D004062","NANDO:2200712","GARD:15123","NANDO:1200688","OMIM:192430"],"synonyms":[{"name":"22q11 deletion syndrome","type":"exact"},{"name":"Shprintzen VCF syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"related"},{"name":"VCF syndrome","type":"exact"},{"name":"VCF-velocardiofacial syndrome","type":"exact"},{"name":"chromosome 22Q11.2 deletion syndrome","type":"related"},{"name":"deletion 22q11.2 syndrome","type":"exact"},{"name":"velocardiofacial syndrome","type":"exact"}],"termid":"MONDO:0008644","terms_by_termid":{"MONDO:0008644":null},"xrefs":{"Monarch":{"xref_id":"0008644"}}}


id: GO:0140576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ascorbate at the level of a cell.","definition_xrefs":["PMID:1623014","PMID:32547589","PMID:17068337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascorbate homeostasis","synonyms":[{"name":"cellular ascorbate homeostasis","type":"narrow"}],"termid":"GO:0140576"}


id: PBO:0048413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA2 antisense RNA 1","termid":"PBO:0048413"}


id: PATO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having a hole or holes, especially a row or array of small holes.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perforate","secondary_identifiers":["PATO:0000649"],"synonyms":[{"name":"permeable","type":"related"},{"name":"pierced","type":"related"}],"termid":"PATO:0002112"}


id: MONDO:0000652
data:
  {"annotated_genes":["SJAG_02855","SJAG_00031","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[85819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the integumental system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02855":null,"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"integumentary system benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060121"],"synonyms":[{"name":"integumental system benign neoplasm","type":"exact"}],"termid":"MONDO:0000652","terms_by_termid":{"MONDO:0007908":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0000652"}}}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: PBO:0052528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein 1","termid":"PBO:0052528"}


id: MONDO:0011319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete activator of liver function 1 (obsolete MONDO:0011319)","secondary_identifiers":["OMIM:603416"],"synonyms":[{"name":"ALFN1","type":"related"},{"name":"Half1","type":"related"},{"name":"RPL21P1","type":"related"},{"name":"activator of liver function 1","type":"exact"},{"name":"activator of liver function type 1","type":"exact"},{"name":"ribosomal PROTEIN L21 pseudogene 1","type":"related"},{"name":"ribosomal Protein L21 pseudogene 1","type":"related"}],"termid":"MONDO:0011319","xrefs":{"Monarch":{"xref_id":"0011319"}}}


id: MONDO:0020402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Accessory mitral valve tissue is a congenital non-syndromic heart malformation defined as an accessory mitral valve leaflet or various accessory mitral valve structures. It may be asymptomatic or present at various ages with symptoms of left ventricular outflow tract obstruction, low cardiac output due to subaortic obstruction or congestive heart failure. In some cases, it may be a source of cardioembolism. The malformation may be isolated or associated with other congenital heart malformations.","definition_xrefs":["Orphanet:99061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital accessory mitral valve tissue","secondary_identifiers":["GARD:19628","MEDGEN:576493","UMLS:C0344774"],"termid":"MONDO:0020402","xrefs":{"Monarch":{"xref_id":"0020402"}}}


id: GO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a cardiac septum over time, from its initial formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac septum development","synonyms":[{"name":"heart septum development","type":"exact"}],"termid":"GO:0003279"}


id: PBO:0047430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 1","termid":"PBO:0047430"}


id: PBO:0078691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-4","termid":"PBO:0078691"}


id: GO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell aging (sensu Fungi) (obsolete GO:0030463)","synonyms":[{"name":"cell aging (sensu Fungi)","type":"exact"}],"termid":"GO:0030463"}


id: PBO:0080101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP11 small subunit processome component","termid":"PBO:0080101"}


id: PR:Q9P4X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh6 gene.","definition_xrefs":["UniProtKB:Q9P4X2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.04c","synonyms":[{"name":"Spom972h-omh6","type":"exact"}],"termid":"PR:Q9P4X2"}


id: PR:Q9HGP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bdf2 gene.","definition_xrefs":["UniProtKB:Q9HGP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain-containing protein C631.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC631.02","synonyms":[{"name":"Spom972h-bdf2","type":"exact"}],"termid":"PR:Q9HGP4"}


id: PBO:0058312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4685","termid":"PBO:0058312"}


id: MONDO:0013144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, hematological disease characterized by decreased levels of antithrombin activity in plasma resulting in impaired inactivation of thrombin and factor Xa. Patients have an increased risk for venous thromboembolism, usually in the deep veins of the arms, legs and pulmonary system and, on occasion, in other venous territories (e.g. cerebral veins or sinus, mesenteric, portal, hepatic, renal and/or retinal veins).","definition_xrefs":["Orphanet:82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"},{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary antithrombin deficiency","secondary_identifiers":["MESH:D020152","MEDGEN:75781","UMLS:C0272375","OMIM:613118","DOID:3755","SCTID:36351005","NORD:791","GARD:6148","ICD9:286.9"],"synonyms":[{"name":"AT III deficiency","type":"exact"},{"name":"AT3D","type":"exact"},{"name":"Antithrombin Deficiency","type":"exact"},{"name":"antithrombin 3 deficiency","type":"exact"},{"name":"antithrombin III deficiency","type":"exact"},{"name":"congenital AT-III deficiency","type":"exact"},{"name":"congenital antithrombin III deficiency","type":"exact"},{"name":"hereditary antithrombin deficiency","type":"exact"},{"name":"hereditary thrombophilia due to congenital antithrombin 3 deficiency","type":"exact"},{"name":"hereditary thrombophilia due to congenital antithrombin deficiency","type":"exact"},{"name":"inherited antithrombin deficiency","type":"exact"},{"name":"thrombophilia 7 due to antithrombin III deficiency","type":"exact"},{"name":"thrombophilia due to antithrombin 3 deficiency","type":"exact"},{"name":"thrombophilia due to antithrombin III deficiency","type":"exact"}],"termid":"MONDO:0013144","xrefs":{"Monarch":{"xref_id":"0013144"}}}


id: FYPO:0007537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the increase in small deletions or duplications (\\\"replication slippage\\\") that normally results from processing arrested replication forks is enhanced.","definition_xrefs":["PMID:33159083","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased replication slippage during replication fork processing","synonyms":[{"name":"increased replication slippage during replication fork processing during mitotic cell cycle","type":"related"},{"name":"increased replication slippage during replication fork processing during vegetative growth","type":"exact"}],"termid":"FYPO:0007537"}


id: PBO:0113455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; iki1 mutations confer resistance to the K. lactis toxin zymocin; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113455"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: FYPO:0000400
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the G2/M transition, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000446"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"secondary_identifiers":["FYPO:0003373"],"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"abnormal mitotic G2/M phase arrest","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at G2/M phase transition","type":"exact"},{"name":"abolished mitotic G2/M phase transition","type":"related"},{"name":"cell cycle progression through the G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000400","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0091390
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX domain containing protein","termid":"PBO:0091390"}


id: GO:0160218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate.","definition_xrefs":["PMID:37754565","PMID:36849569","PMID:26942675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of acetyl-CoA biosynthetic process from pyruvate","termid":"GO:0010510"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"pyruvate decarboxylation to acetyl-CoA","termid":"GO:0006086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"negative regulation of acetyl-CoA biosynthetic process from pyruvate","termid":"GO:0160218"}


id: PATO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased size quality inhering in a bearer by virtue of the bearer's exhibiting enlargement of a cell or constituent group of cells (for example, organ).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic","synonyms":[{"name":"hypertrophy","type":"narrow"}],"termid":"PATO:0000584"}


id: MONDO:0012191
data:
  {"annotated_genes":["SJAG_02353"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85796],"is_not":false,"summary":null,"term":"MONDO:0012191"}]},"cv_name":"mondo","definition":"Hepatoencephalopathy due to combined oxidative phosphorylation deficiency type 1 is a rare, inherited mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by intrauterine growth retardation, metabolic decompensation with recurrent vomiting, persistent severe lactic acidosis, encephalopathy, seizures, failure to thrive, severe global developmental delay, poor eye contact, severe muscular hypotonia or axial hypotonia with limb hypertonia, hepatomegaly and/or liver dysfunction and/or liver failure, leading to fatal outcome in severe cases. Neuroimaging abnormalities may include corpus callosum thinning, leukodystrophy, delayed myelination and basal ganglia involvement.","definition_xrefs":["Orphanet:137681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02353":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"hepatoencephalopathy due to combined oxidative phosphorylation defect type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16949","NCIT:C125663","MESH:C563797","OMIM:609060","UMLS:C1836797","DOID:0111474","SCTID:764962002","MEDGEN:322999"],"synonyms":[{"name":"COXPD1","type":"related"},{"name":"GFM1 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"Hepatoencephalopathy due to COXPD1","type":"exact"},{"name":"Hepatoencephalopathy, early fatal progressive","type":"related"},{"name":"combined oxidative phosphorylation deficiency 1","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in GFM1","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 1","type":"exact"},{"name":"hepatoencephalopathy due to combined oxidative phosphorylation defect type 1","type":"exact"}],"termid":"MONDO:0012191","terms_by_termid":{"MONDO:0012191":null},"xrefs":{"Monarch":{"xref_id":"0012191"}}}


id: MOD:01722
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01722"}


id: MONDO:1011066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia, bilateral that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia, bilateral, non-human animal","termid":"MONDO:1010266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal hypoplasia, bilateral, pig","secondary_identifiers":["OMIA:000858-9823"],"termid":"MONDO:1011066","xrefs":{"Monarch":{"xref_id":"1011066"}}}


id: PBO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aberrent Microtubules when Overexpressed","termid":"PBO:0004317"}


id: PBO:0051530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit beta","termid":"PBO:0051530"}


id: PR:O94539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pam17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocated-associated motor subunit pam17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.04","synonyms":[{"name":"Spom972h-pam17","type":"exact"}],"termid":"PR:O94539"}


id: GO:0019036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specific locations and structures in the virus infected cell involved in transcribing the viral genome.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral transcriptional complex","termid":"GO:0019036"}


id: GO:0070656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new mechanoreceptors to replace those lost or destroyed by injury.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"}


id: PBO:0062407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 33 pseudogene","termid":"PBO:0062407"}


id: PBO:0082020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member A, cell cycle regulator","termid":"PBO:0082020"}


id: SO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:17099227","PMID:24659245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA_gene","synonyms":[{"name":"C/D scaRNA gene","type":"exact"}],"termid":"SO:0002372"}


id: PBO:0066362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 regulator of GUCY2D","termid":"PBO:0066362"}


id: PBO:0054163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1532","termid":"PBO:0054163"}


id: PBO:0080829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yes1 associated transcriptional regulator","termid":"PBO:0080829"}


id: GO:0050742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via S-(4a-FMN)-L-cysteine.","definition_xrefs":["RESID:AA0351"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via S-(4a-FMN)-L-cysteine (obsolete GO:0050742)","termid":"GO:0050742"}


id: GO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates glucose import.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import by transcription from RNA polymerase II promoter (obsolete GO:0100018)","termid":"GO:0100018"}


id: MONDO:0017516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of fingers","termid":"MONDO:0017451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of fingers, bilateral","secondary_identifiers":["icd11.foundation:412618992","MEDGEN:1665318","Orphanet:295130","UMLS:C4751023"],"synonyms":[{"name":"short fingers, bilateral","type":"exact"}],"termid":"MONDO:0017516","xrefs":{"Monarch":{"xref_id":"0017516"}}}


id: PBO:0042999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin B","termid":"PBO:0042999"}


id: PBO:0072379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27a pseudogene 5","termid":"PBO:0072379"}


id: MONDO:0012098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 20 (SCA20) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by cerebellar dysarthria as the initial typical manifestation.","definition_xrefs":["Orphanet:101110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 20","secondary_identifiers":["GARD:9997","icd11.foundation:960716995","DOID:0050971","MEDGEN:373352","MESH:C537199","SCTID:718771009","UMLS:C1837541","OMIM:608687"],"synonyms":[{"name":"SCA20","type":"exact"},{"name":"chromosome 11q12 duplication syndrome, 260-Kb","type":"related"},{"name":"spinocerebellar ataxia 20","type":"related"},{"name":"spinocerebellar ataxia type 20","type":"exact"},{"name":"spinocerebellar ataxia with dysphonia","type":"related"},{"name":"spinocerebellar ataxia with spasmodic cough","type":"related"}],"termid":"MONDO:0012098","xrefs":{"Monarch":{"xref_id":"0012098"}}}


id: GO:0032643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045420"],"synonyms":[{"name":"regulation of CCN2 production","type":"exact"},{"name":"regulation of CTGF production","type":"exact"},{"name":"regulation of Fisp12 production","type":"exact"},{"name":"regulation of Hcs24 production","type":"exact"},{"name":"regulation of IGFBP8 production","type":"exact"},{"name":"regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032643"}


id: PATO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having deeply undulating edges forming lobes.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lobate","termid":"PATO:0001367"}


id: PR:000050493
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:30853434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/UnPhos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"PomBase_original_PRO_term_name: division mal foutue 1 protein unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291","type":"narrow"},{"name":"mid1/UnPhos","type":"exact"},{"name":"mid1/UnPhos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050493"}


id: GO:0071458
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products that penetrate only the cytoplasmic side of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of cytoplasmic side of endoplasmic reticulum membrane (obsolete GO:0071458)","synonyms":[{"name":"integral to ER membrane, cytosolic side","type":"exact"},{"name":"integral to cytosolic leaflet of endoplasmic reticulum membrane","type":"exact"},{"name":"integral to cytosolic side of ER membrane","type":"exact"},{"name":"integral to cytosolic side of endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0071458"}


id: PBO:0054386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1782","termid":"PBO:0054386"}


id: GO:1902374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:20160119","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA catabolic process","synonyms":[{"name":"regulation of rRNA breakdown","type":"exact"},{"name":"regulation of rRNA catabolism","type":"exact"},{"name":"regulation of rRNA degradation","type":"exact"}],"termid":"GO:1902374"}


id: GO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulonate + NAD+ = 3-dehydro-L-gulonate + H+ + NADH.","definition_xrefs":["EC:1.1.1.45","RHEA:12889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-gulonate 3-dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-5661290","KEGG_REACTION:R02640","MetaCyc:L-GULONATE-3-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-3-aldonate dehydrogenase activity","type":"related"},{"name":"L-3-aldonic dehydrogenase activity","type":"related"},{"name":"L-3-hydroxyacid dehydrogenase activity","type":"related"},{"name":"L-beta-hydroxy-acid-NAD-oxidoreductase activity","type":"related"},{"name":"L-beta-hydroxyacid dehydrogenase activity","type":"related"},{"name":"L-gulonate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"L-gulonic acid dehydrogenase activity","type":"related"}],"termid":"GO:0050104"}


id: PBO:0069582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 856, pseudogene","termid":"PBO:0069582"}


id: PBO:0069998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1293, pseudogene","termid":"PBO:0069998"}


id: MONDO:0009506
data:
  {"annotated_genes":["SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"specific granule deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10778","MESH:C562873","UMLS:C0398593","OMIMPS:245480","Orphanet:169142","SCTID:234587000","MEDGEN:140766"],"synonyms":[{"name":"SGD","type":"related"},{"name":"lactoferrin-deficient neutrophils","type":"related"},{"name":"neutrophil lactoferrin deficiency","type":"related"},{"name":"neutrophil-specific granule deficiency","type":"exact"},{"name":"recurrent infection due to specific granule deficiency","type":"exact"},{"name":"specific granule deficiency","type":"exact"}],"termid":"MONDO:0009506","terms_by_termid":{"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0009506"}}}


id: PBO:0057176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 328","termid":"PBO:0057176"}


id: GO:0036284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing close contact between Sertoli-Sertoli cells or Sertoli-spermatids in the seminiferous tubules of the testes.","definition_xrefs":["PMID:22510523","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tubulobulbar complex","synonyms":[{"name":"TBC","type":"exact"}],"termid":"GO:0036284"}


id: GO:0098693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synaptic vesicle cycle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle cycle","termid":"GO:0098693"}


id: PBO:0002863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR38 (predicted)","termid":"PBO:0002863"}


id: MONDO:0034923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory/autoimmune disorder involving the lacrimal system (obsolete MONDO:0034923)","secondary_identifiers":["Orphanet:519264"],"termid":"MONDO:0034923","xrefs":{"Monarch":{"xref_id":"0034923"}}}


id: PBO:0026740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_rapamycin","termid":"PBO:0026740"}


id: GO:0009942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the longitudinal axis. In plants, this is the axis that runs from the shoot to the root.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"longitudinal axis specification","synonyms":[{"name":"apical-basal pattern specification","type":"exact"},{"name":"longitudinal axis determination","type":"related"}],"termid":"GO:0009942"}


id: PATO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being many folds greater relative to the normal average.","definition_xrefs":["PATOC:UMH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigantic","synonyms":[{"name":"giant","type":"exact"}],"termid":"PATO:0001940"}


id: MONDO:0100543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by the presence of somatic mutations in bone marrow or peripheral blood cells in individuals who may be cytopenic but do not have morphologic evidence of hematologic neoplasia. Its prevalence rises with age and is found in approximately 10% of individuals aged 70 to 80. It is associated with an increased risk of hematologic neoplasia. Mutations in the DNMT3A, TET2, or ASXL1 genes are usually identified. Approximately 10%-40% of individuals with age-related clonal hematopoiesis will progress to meet the diagnostic criteria for clonal hematopoiesis of indeterminate potential.","definition_xrefs":["NCIT:C158547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clonal hematopoiesis","termid":"MONDO:0100542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"clonal hematopoiesis of indeterminate potential","secondary_identifiers":["MEDGEN:1681237","UMLS:C4761612"],"termid":"MONDO:0100543","xrefs":{"Monarch":{"xref_id":"0100543"}}}


id: GO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the shaping of the outflow tract.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in outflow tract morphogenesis","termid":"GO:0061309"}


id: PBO:0087652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; complex binds specifically to cytosolic chaperonin and transfers target proteins to it","termid":"PBO:0087652"}


id: MONDO:0004038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency in the enamel tissue that results in the formation of grooves, pits, or dents on the surface of the affected teeth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental enamel hypoplasia","secondary_identifiers":["NCIT:C34529","DOID:693","EFO:1001304","MESH:D003744","MEDGEN:3730","SCTID:26597004","UMLS:C0011351"],"synonyms":[{"name":"enamel hypoplasia","type":"exact"}],"termid":"MONDO:0004038","xrefs":{"Monarch":{"xref_id":"0004038"}}}


id: MONDO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign inflammatory colitis caused by a non-IgE-mediated immune reaction to ingested food proteins.","definition_xrefs":["PMID:17584315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal allergy","termid":"MONDO:0000777"},{"relation_name":"is_a","term_name":"proctocolitis","termid":"MONDO:0024278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"food protein-induced allergic proctocolitis","secondary_identifiers":["UMLS:C4750318","MEDGEN:1663071"],"synonyms":[{"name":"FPIPC","type":"exact"},{"name":"allergic proctocolitis","type":"broad"},{"name":"milk protein proctocololitis","type":"narrow"}],"termid":"MONDO:0100002","xrefs":{"Monarch":{"xref_id":"0100002"}}}


id: GO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid-encoded DNA-directed RNA polymerase complex that resembles eubacterial multisubunit RNA polymerases, with a core composed of alpha, beta, and beta-prime subunits. An additional subunit, a sigma factor, is required for promoter recognition. PEP-A is generated from the PEP-B form during chloroplast maturation to generate a complex composed of at least thirteen polypeptides that is not sensitive to the antibiotic rifampicin, like its precursor form the PEP-B complex.","definition_xrefs":["PMID:10946105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex A","synonyms":[{"name":"PEP-A","type":"exact"}],"termid":"GO:0000343"}


id: GO:0120196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of anther dehiscence.","definition_xrefs":["GOC:lr","PMID:30911018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anther dehiscence","termid":"GO:0120194"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"anther dehiscence","termid":"GO:0009901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anther dehiscence","termid":"GO:0120196"}


id: PR:P87228
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-3-phosphoglycerate dehydrogenase SerA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3-phosphoglycerate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.07","secondary_identifiers":["UniProtKB:P87228"],"synonyms":[{"name":"3-PGDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-serA","type":"exact"}],"termid":"PR:P87228"}


id: PBO:0088697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85a","termid":"PBO:0088697"}


id: GO:0036171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a chemical stimulus.","definition_xrefs":["PMID:17554048","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}


id: PBO:0113123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential chromatin-associated protein; involved in initiation of DNA replication; promotes origin duplex unwinding by head-to-head CMG helicase complexes; required for association of MCM2-7 complex with replication origins; required to stabilize the catalytic subunit of DNA polymerase-alpha; coordinates function of the replication fork helicase; self-associates through its N-terminal domain","termid":"PBO:0113123"}


id: PBO:0046600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 2","termid":"PBO:0046600"}


id: MONDO:0005509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mesenchymal tumor composed of fibroblastic and histiocytic cells.","definition_xrefs":["NCIT:C35765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytoma","secondary_identifiers":["icd11.foundation:1211753554","ICDO:8831/0","DOID:4231","MEDGEN:267592","MESH:D051642","UMLS:C1509147","EFO:0005561"],"synonyms":[{"name":"histiocytoma","type":"exact"}],"termid":"MONDO:0005509","xrefs":{"Monarch":{"xref_id":"0005509"}}}


id: GO:1903936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium arsenite stimulus.","definition_xrefs":["GOC:TermGenie","PMID:18674524","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium arsenite","termid":"GO:1903935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium arsenite","termid":"GO:1903936"}


id: PBO:0047343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 1","termid":"PBO:0047343"}


id: GO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674","GO:0004527"],"is_obsolete":false,"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","secondary_identifiers":["EC:3.1.16.-"],"termid":"GO:0016797"}


id: GO:0006587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation from tryptophan of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolalkylamine metabolic process","termid":"GO:0006586"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"serotonin biosynthetic process","termid":"GO:0042427"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"serotonin biosynthetic process from tryptophan","synonyms":[{"name":"serotonin anabolism from tryptophan","type":"exact"},{"name":"serotonin formation from tryptophan","type":"exact"},{"name":"serotonin synthesis from tryptophan","type":"exact"}],"termid":"GO:0006587"}


id: GO:1901469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of syringal lignin catabolic process","synonyms":[{"name":"regulation of S-lignin catabolic process","type":"exact"},{"name":"regulation of syringal lignin breakdown","type":"exact"},{"name":"regulation of syringal lignin catabolism","type":"exact"},{"name":"regulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901469"}


id: PBO:0063202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP1 antisense RNA 1","termid":"PBO:0063202"}


id: PBO:0058120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4422 host gene","termid":"PBO:0058120"}


id: PATO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000832 relative visual acuity value (obsolete PATO:0000832)","termid":"PATO:0000832"}


id: PBO:0017595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med18","termid":"PBO:0017595"}


id: PBO:0069893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1183, pseudogene","termid":"PBO:0069893"}


id: PR:Q96WW4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ivn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WW4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasion protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.07c","synonyms":[{"name":"Spom972h-ivn1","type":"exact"}],"termid":"PR:Q96WW4"}


id: PBO:0078112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-2","termid":"PBO:0078112"}


id: PR:O14115
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptl2 gene.","definition_xrefs":["UniProtKB:O14115","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin-like phospholipase domain-containing protein SPAC1786.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.01c","synonyms":[{"name":"Spom972h-ptl2","type":"exact"}],"termid":"PR:O14115"}


id: PBO:0086982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; VTC complex is involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; also has mRNA binding activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0086982"}


id: MONDO:0004196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic rectal carcinoma with a spindle cell, sarcomatoid component.","definition_xrefs":["NCIT:C5556"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"squamous cell carcinoma of rectum","termid":"MONDO:0018515"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"},{"relation_name":"is_a","term_name":"rectal carcinoma","termid":"MONDO:0044937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectal sarcomatoid carcinoma","secondary_identifiers":["DOID:7356","MEDGEN:235533","UMLS:C1335689"],"synonyms":[{"name":"rectal sarcomatoid cancer","type":"exact"},{"name":"rectal sarcomatoid carcinoma","type":"exact"},{"name":"rectal spindle cell carcinoma","type":"exact"},{"name":"rectum sarcomatoid carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma of rectum","type":"exact"},{"name":"sarcomatoid carcinoma of the rectum","type":"exact"}],"termid":"MONDO:0004196","xrefs":{"Monarch":{"xref_id":"0004196"}}}


id: GO:0008220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes that cause necrosis, the death of tissues, in another organism.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete necrosis (obsolete GO:0008220)","synonyms":[{"name":"necrosis","type":"exact"}],"termid":"GO:0008220"}


id: PBO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast Phosphatase Activator","termid":"PBO:0007964"}


id: FYPO:0004285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mitomycin C.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on mitomycin C","synonyms":[{"name":"normal cell population growth in presence of mitomycin C","type":"exact"},{"name":"normal cell population growth on mitomycin C","type":"exact"},{"name":"normal vegetative cell population growth on mitomycin C","type":"exact"}],"termid":"FYPO:0004285"}


id: PBO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad7 homolog Rhp7","termid":"PBO:0005008"}


id: PBO:0005198
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open-angle glaucoma","termid":"PBO:0005198"}


id: GO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amine(out) = ADP + phosphate + amine(in).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amine transporter activity (obsolete GO:0031263)","synonyms":[{"name":"ATP-dependent amine transporter activity","type":"exact"},{"name":"amine ABC transporter","type":"narrow"},{"name":"amine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031263"}


id: MONDO:0700003
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"Disorder associated with pregnancy, childbirth, and puerperium.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700003","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0700003"}}}


id: PBO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_slow_rereplication","termid":"PBO:0030271"}


id: SO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs: hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Y_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:Y_RNA","type":"exact"},{"name":"Y RNA","type":"exact"}],"termid":"SO:0000405"}


id: MONDO:0957832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniometadiaphyseal osteosclerosis with hip dysplasia","secondary_identifiers":["OMIM:620558","UMLS:C5882710","MEDGEN:1844026"],"termid":"MONDO:0957832","xrefs":{"Monarch":{"xref_id":"0957832"}}}


id: GO:0120097
data:
  {"annotated_genes":["SJAG_06425","SJAG_00295"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89892,91562],"is_not":false,"summary":null,"term":"GO:0120097"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the second mannose to the glycosylphosphatidylinositol (GPI) during GPI precursor assembly. In yeast S. cerevisiae this complex consists of GPI18p and PGA1p.","definition_xrefs":["GOC:bhm","PMID:17615295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase II complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:0120097","terms_by_termid":{"GO:0120097":null}}


id: PATO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000641 deposition defective (obsolete PATO:0000641)","termid":"PATO:0000641"}


id: FYPO:0003778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum tubular network is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to endoplasmic reticulum tubular network","synonyms":[{"name":"decreased protein localisation to endoplasmic reticulum tubular network","type":"exact"},{"name":"decreased protein localization to ER tubular network","type":"exact"},{"name":"decreased protein localization to endoplasmic reticulum tubular network during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to endoplasmic reticulum tubular network during vegetative growth","type":"exact"},{"name":"decreased protein localization to tubular ER","type":"exact"},{"name":"reduced protein localization to endoplasmic reticulum tubular network","type":"exact"}],"termid":"FYPO:0003778"}


id: GO:0060207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase which is a period of sexual quiescence and represents the phase of the mature corpus luteum.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diestrus","termid":"GO:0060207"}


id: PBO:0045018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 1C","termid":"PBO:0045018"}


id: GO:1903171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of carbon dioxide within an organism or cell.","definition_xrefs":["GO_REF:0000072","GOC:mr","GOC:TermGenie","PMID:16571594"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon dioxide homeostasis (obsolete GO:1903171)","termid":"GO:1903171"}


id: GO:0140581
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108172],"is_not":false,"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu+(in) = ADP + phosphate + Cu+(out).","definition_xrefs":["RHEA:25792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type monovalent copper transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14455","EC:7.2.2.8"],"termid":"GO:0140581","terms_by_termid":{"GO:0140581":null}}


id: FYPO:0009083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to lithium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to lithium chloride and MMS","type":"exact"},{"name":"resistance to lithium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and MMS in combination","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to lithium chloride and MMS","type":"exact"},{"name":"resistant to lithium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009083"}


id: PATO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001121 power value (obsolete PATO:0001121)","termid":"PATO:0001121"}


id: GO:1904309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["PMID:21597460","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cordycepin","synonyms":[{"name":"response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904309"}


id: PBO:0081898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 849, pseudogene","termid":"PBO:0081898"}


id: PBO:0047579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 2","termid":"PBO:0047579"}


id: PBO:0110979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (IN blood group)","termid":"PBO:0110979"}


id: PBO:0062376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 19 pseudogene","termid":"PBO:0062376"}


id: GO:0061320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a pericardial nephrocyte. A pericardial nephrocyte is an insect renal cell that filters hemolymph and is found with other pericardial nephrocytes in two rows flanking the dorsal vessel. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:19783135","CL:0000474","GOC:sart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardial nephrocyte differentiation","secondary_identifiers":["GO:0007513"],"synonyms":[{"name":"pericardial cell differentiation","type":"narrow"}],"termid":"GO:0061320"}


id: PBO:0028374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mitomycin_C","termid":"PBO:0028374"}


id: GO:0097400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:21602493","GOC:ic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-17","termid":"GO:0097398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-17-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-448424"],"synonyms":[{"name":"IL-17-mediated signaling pathway","type":"exact"},{"name":"IL-17-mediated signalling pathway","type":"exact"},{"name":"interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:0097400"}


id: PBO:0057883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3187","termid":"PBO:0057883"}


id: MONDO:0020706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteophytes that most commonly develop on the distal interphalangeal joints, often in the setting of osteoarthritis.","definition_xrefs":["NCIT:C34671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exostosis","termid":"MONDO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heberden's node","secondary_identifiers":["UMLS:C0018862","MEDGEN:6761","SCTID:239869009"],"synonyms":[{"name":"Heberden's node","type":"exact"},{"name":"tuberculum arthriticum","type":"exact"}],"termid":"MONDO:0020706","xrefs":{"Monarch":{"xref_id":"0020706"}}}


id: PBO:0047114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member A","termid":"PBO:0047114"}


id: PBO:0055700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLP homolog, long-term synaptic facilitation factor","termid":"PBO:0055700"}


id: FYPO:0007754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which phase II of mitotic spindle assembly does not occur. During phase II, the spindle is normally maintained at a constant length during mitotic metaphase.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic spindle assembly","termid":"FYPO:0001683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic spindle formation phase II","synonyms":[{"name":"abnormal mitotic spindle formation, without spindle phase II","type":"exact"},{"name":"abolished mitotic spindle assembly phase II","type":"exact"},{"name":"abolished mitotic spindle formation (spindle phase two)","type":"exact"}],"termid":"FYPO:0007754"}


id: PBO:0059458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minisatellite binding protein 2","termid":"PBO:0059458"}


id: GO:1900506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"regulation of FeMoco assembly","type":"exact"},{"name":"regulation of FeMoco biosynthetic process","type":"exact"},{"name":"regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthetic process","type":"exact"}],"termid":"GO:1900506"}


id: PBO:0029051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_vegetative_growth","termid":"PBO:0029051"}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: PBO:0045295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 47","termid":"PBO:0045295"}


id: PBO:0068235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal N1","termid":"PBO:0068235"}


id: GO:0070675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hypoxanthine + H2O + O2 = xanthine + H2O2.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hypoxanthine oxidase activity","secondary_identifiers":["Reactome:R-HSA-74247"],"synonyms":[{"name":"Schardinger enzyme activity","type":"related"},{"name":"hypoxanthine-xanthine oxidase activity","type":"broad"},{"name":"hypoxanthine:O2 oxidoreductase activity","type":"related"},{"name":"hypoxanthine:oxygen oxidoreductase activity","type":"related"},{"name":"schardinger enzyme","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"}],"termid":"GO:0070675"}


id: PBO:0040657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 1","termid":"PBO:0040657"}


id: PBO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox retrogene P8","termid":"PBO:0060486"}


id: MONDO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occlusion of the retinal vasculature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peripheral vascular disease","termid":"MONDO:0005294"},{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"vascular occlusion disorder","termid":"MONDO:0020672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal vascular occlusion","secondary_identifiers":["ICD9:362.3","SCTID:73757007","NCIT:C34980","UMLS:C0035326","ICD9:362.30","DOID:1729","MEDGEN:19762","ICD10CM:H34"],"synonyms":[{"name":"retinal vascular occlusion","type":"exact"},{"name":"retinal vascular occlusion, unspecified","type":"exact"}],"termid":"MONDO:0002089","xrefs":{"Monarch":{"xref_id":"0002089"}}}


id: PBO:0027471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sanglifehrin_A_binding","termid":"PBO:0027471"}


id: PBO:0085523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25A has a paralog, RPS25B, that arose from the whole genome duplication","termid":"PBO:0085523"}


id: PR:P50524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpn12 gene.","definition_xrefs":["UniProtKB:P50524","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.01","synonyms":[{"name":"Spom972h-rpn12","type":"exact"}],"termid":"PR:P50524"}


id: GO:1903918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament severing.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament severing","synonyms":[{"name":"regulation of F-actin severing","type":"exact"},{"name":"regulation of actin filament severing activity","type":"related"},{"name":"regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903918"}


id: _global:regulates_o_has_participant
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_participant relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_participant","secondary_identifiers":["GOREL:0001016"],"termid":"_global:regulates_o_has_participant"}


id: PR:P0CY14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat3-Mm gene.","definition_xrefs":["UniProtKB:P0CY14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type M-specific polypeptide Mi (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.01c","synonyms":[{"name":"Spom972h-mat3-Mm","type":"exact"}],"termid":"PR:P0CY14"}


id: GO:0015800
data:
  {"annotated_genes":["SJAG_00522","SJAG_00626","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[104149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901481"},{"annotations":[104150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"}]},"cv_name":"biological_process","definition":"The directed movement of acidic amino acids, amino acids with a pH below 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acidic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015800","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null,"GO:1901481":null}}


id: MONDO:1012714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in dogs with a XY karyotype.","definition_xrefs":["OMIA:001601-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, dog","termid":"MONDO:1012714","xrefs":{"Monarch":{"xref_id":"1012714"}}}


id: GO:0006489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a diphosphorylated dolichol derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"dolichyl diphosphate metabolic process","termid":"GO:0046465"},{"relation_name":"part_of","term_name":"dolichol-linked oligosaccharide biosynthetic process","termid":"GO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0006486","GO:0008150"],"is_obsolete":false,"name":"dolichyl diphosphate biosynthetic process","secondary_identifiers":["Reactome:R-HSA-446199"],"synonyms":[{"name":"dolichyl diphosphate anabolism","type":"exact"},{"name":"dolichyl diphosphate biosynthesis","type":"exact"},{"name":"dolichyl diphosphate formation","type":"exact"},{"name":"dolichyl diphosphate synthesis","type":"exact"}],"termid":"GO:0006489"}


id: PR:P24865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cig1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P24865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cig1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4E9.02","synonyms":[{"name":"Spom972h-cig1","type":"exact"}],"termid":"PR:P24865"}


id: FYPO:0001902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small P-bodies","termid":"FYPO:0001900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small P-bodies during glucose starvation","synonyms":[{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"small P bodies during glucose starvation","type":"exact"},{"name":"small P-bodies during glucose depletion","type":"exact"},{"name":"small P-bodies during glucose deprivation","type":"exact"},{"name":"small P-bodies during glucose limitation","type":"related"},{"name":"small P-body during glucose starvation","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies during glucose starvation","type":"exact"}],"termid":"FYPO:0001902"}


id: PBO:0039392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 1","termid":"PBO:0039392"}


id: GO:0003018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory process that occurs at the level of the vasculature.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular process in circulatory system","synonyms":[{"name":"vasculature process","type":"exact"}],"termid":"GO:0003018"}


id: MONDO:0032833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower urinary tract obstruction, congenital","secondary_identifiers":["OMIM:618612","UMLS:C5231427","MEDGEN:1684849"],"synonyms":[{"name":"LOWER URINARY TRACT OBSTRUCTION, CONGENITAL","type":"related"},{"name":"LUTO","type":"related"}],"termid":"MONDO:0032833","xrefs":{"Monarch":{"xref_id":"0032833"}}}


id: PBO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricothiodystrophy disorder","termid":"PBO:0004218"}


id: PBO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 5A","termid":"PBO:0044876"}


id: PBO:0074558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 11","termid":"PBO:0074558"}


id: PBO:0058402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4773-1","termid":"PBO:0058402"}


id: PBO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell","termid":"PBO:0030747"}


id: PBO:0066863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 163","termid":"PBO:0066863"}


id: PBO:0080621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 62","termid":"PBO:0080621"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: PBO:0088206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn(II)2Cys6 family transcription factor; positively regulates sterol uptake genes under anaerobic conditions; involved in hypoxic gene expression; represses filamentation-inducing genes during vegetative growth; positively regulates mating with SUT2 by repressing expression of genes that act as mating inhibitors; repressed by STE12; relocalizes from the nucleus to the cytoplasm upon DNA replication stress; SUT1 has a paralog, SUT2, that arose from the whole genome duplication","termid":"PBO:0088206"}


id: MONDO:0013860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic membranous glomerulonephritis (IMG) is a primary glomerular disease characterized by proteinuria, usually in the nephrotic range, with preserved renal function.","definition_xrefs":["Orphanet:97560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"},{"relation_name":"is_a","term_name":"membranous glomerulonephritis","termid":"MONDO:0005376"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic membranous glomerulonephritis","secondary_identifiers":["MEDGEN:39226","NCIT:C123060","OMIM:614692","SCTID:722119002","UMLS:C0086445","GARD:9180"],"synonyms":[{"name":"Extramembranous glomerulonephritis","type":"related"},{"name":"Idiopathic membranous glomerulopathy","type":"related"},{"name":"MBNP","type":"related"},{"name":"MGN","type":"related"},{"name":"glomerulonephritis, membranous","type":"related"},{"name":"idiopathic membranous nephropathy","type":"related"},{"name":"membranous GN","type":"related"},{"name":"membranous nephropathy - Idiopathic","type":"exact"},{"name":"membranous nephropathy, susceptibility to","type":"related"}],"termid":"MONDO:0013860","xrefs":{"Monarch":{"xref_id":"0013860"}}}


id: PBO:0043476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic nucleotide 3' phosphodiesterase","termid":"PBO:0043476"}


id: GO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization","termid":"GO:0003254"}


id: FYPO:0007881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of  histone H2A phosphorylation is longer than normal during a cellular response to methyl methanesulfonate. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be affected.","definition_xrefs":["PMID:34608864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of histone H2A phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased duration of histone H2A phosphorylation during cellular response to MMS","type":"exact"},{"name":"increased duration of histone H2A phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased duration of histone H2A phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"prolonged histone H2A phosphorylation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0007881"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["GOC:pde","GOC:rb","PMID:11238902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


