# terms

id: PBO:0050175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 31","termid":"PBO:0050175"}


id: PBO:0110359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 3","termid":"PBO:0110359"}


id: GO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + cholesterol = adenosine 3',5'-bisphosphate + cholesterol sulfate + H+.","definition_xrefs":["PMID:12730293","RHEA:52368","PMID:12145317","PMID:11416019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol sulfotransferase activity","termid":"GO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cholesterol sulfotransferase activity","termid":"GO:0051922"}


id: PBO:0076795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane epididymal protein 2, pseudogene","termid":"PBO:0076795"}


id: PR:Q9P7S6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf30 gene.","definition_xrefs":["UniProtKB:Q9P7S6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.07c","synonyms":[{"name":"SWI/SNF complex subunit snf30 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf30","type":"exact"}],"termid":"PR:Q9P7S6"}


id: PBO:0004254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7G(5')pppN diphosphatase (predicted)","termid":"PBO:0004254"}


id: MONDO:0032632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 28","secondary_identifiers":["MEDGEN:1648493","OMIM:618249","DOID:0112095","UMLS:C4748827","GARD:18376"],"synonyms":[{"name":"MC1DN28","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 28","type":"related"}],"termid":"MONDO:0032632","xrefs":{"Monarch":{"xref_id":"0032632"}}}


id: PBO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 22","termid":"PBO:0075269"}


id: MONDO:1010045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diprosopus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diprosopus, non-human animal","secondary_identifiers":["OMIA:000290"],"termid":"MONDO:1010045","xrefs":{"Monarch":{"xref_id":"1010045"}}}


id: MONDO:0003333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature monodermal teratoma that arises from the ovary and is characterized by the presence of benign, thyroid-type tissues.","definition_xrefs":["NCIT:C40012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"struma ovarii","termid":"MONDO:0006980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign struma ovarii","secondary_identifiers":["DOID:5209"],"synonyms":[{"name":"benign struma ovarii","type":"exact"},{"name":"struma ovarii, benign","type":"exact"}],"termid":"MONDO:0003333","xrefs":{"Monarch":{"xref_id":"0003333"}}}


id: GO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the host cell wall and/or host plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell surface","termid":"GO:0044228"}


id: PR:O13715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 5 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.08","synonyms":[{"name":"Spom972h-mug5","type":"exact"}],"termid":"PR:O13715"}


id: PBO:0041353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4A antisense RNA 1","termid":"PBO:0041353"}


id: PBO:0073750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 5","termid":"PBO:0073750"}


id: FYPO:0001453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethanol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to ethanol","synonyms":[{"name":"resistance to ethanol during mitotic cell cycle","type":"related"},{"name":"resistance to ethanol during vegetative growth","type":"exact"},{"name":"resistance to ethyl alcohol","type":"exact"},{"name":"resistant to ethanol","type":"exact"}],"termid":"FYPO:0001453"}


id: PBO:0074529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C5","termid":"PBO:0074529"}


id: MONDO:0037746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from the vagina and is characterized by the presence of an epithelial and a mesenchymal component. This category includes adenosarcoma, carcinosarcoma, and malignant mixed tumor resembling synovial sarcoma.","definition_xrefs":["NCIT:C40276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","secondary_identifiers":["UMLS:C1512974","MEDGEN:307683"],"synonyms":[{"name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumor","type":"exact"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumour","type":"exact"}],"termid":"MONDO:0037746","xrefs":{"Monarch":{"xref_id":"0037746"}}}


id: GO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac conduction system development","synonyms":[{"name":"cardiac impulse conducting system development","type":"exact"},{"name":"heart conduction system development","type":"exact"}],"termid":"GO:0003161"}


id: GO:0102971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + phosphinothricin = H+ + coenzyme A(4-) + N-acetylphosphinatothricinate.","definition_xrefs":["EC:2.3.1.183","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphinothricin N-acetyltransferase activity","secondary_identifiers":["RHEA:12597","MetaCyc:RXN-9382"],"termid":"GO:0102971"}


id: PBO:0046644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 25","termid":"PBO:0046644"}


id: PBO:0063914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta","termid":"PBO:0063914"}


id: PBO:0087514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heteropentameric Replication factor C (RF-C); which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087514"}


id: PBO:0005451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase Ade6","termid":"PBO:0005451"}


id: PBO:0002835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosyltransferase Och1","termid":"PBO:0002835"}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24004945","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: PBO:0075047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-10","termid":"PBO:0075047"}


id: MONDO:0013490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 2A","secondary_identifiers":["UMLS:C3151355","DOID:0080318","GARD:15728","MEDGEN:462705","OMIM:613925"],"synonyms":[{"name":"MLC2A","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 2A","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts type 2A","type":"exact"}],"termid":"MONDO:0013490","xrefs":{"Monarch":{"xref_id":"0013490"}}}


id: PBO:0029739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_nitrogen_starvation","termid":"PBO:0029739"}


id: GO:0097401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acidification of the synaptic vesicle lumen via transport of protons into the vesicle. The resulting electrochemical gradient powers neurotransmitter loading.","definition_xrefs":["GOC:dsf","PMID:22875945","PMID:21172605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"neuron cellular homeostasis","termid":"GO:0070050"},{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"},{"relation_name":"part_of","term_name":"synaptic vesicle maturation","termid":"GO:0016188"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle lumen acidification","synonyms":[{"name":"synaptic vesicle lumen pH reduction","type":"exact"},{"name":"synaptic vesicle proton loading","type":"exact"}],"termid":"GO:0097401"}


id: MONDO:0957572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 9","secondary_identifiers":["OMIM:620478","UMLS:C5882678","MEDGEN:1844414"],"termid":"MONDO:0957572","xrefs":{"Monarch":{"xref_id":"0957572"}}}


id: PBO:0073111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 39U member 1","termid":"PBO:0073111"}


id: PBO:0078601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 14","termid":"PBO:0078601"}


id: SO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"snoRNA that is associated with guiding methylation of nucleotides. It contains two short conserved sequence motifs: C (RUGAUGA) near the 5-prime end and D (CUGA) near the 3-prime end.","direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_encoding","termid":"SO:0000578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_encoding","synonyms":[{"name":"C/D box snoRNA encoding","type":"exact"}],"termid":"SO:0000585"}


id: PBO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA(Gln) amidotransferase complex subunit Gtf1 (predicted)","termid":"PBO:0017087"}


id: GO:0007437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the adult salivary gland are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland morphogenesis","termid":"GO:0007437"}


id: PBO:0065465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 7 pseudogene 1","termid":"PBO:0065465"}


id: PBO:0026847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_tRNA_gene","termid":"PBO:0026847"}


id: PBO:0040019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8","termid":"PBO:0040019"}


id: GO:0070875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"positively_regulates","term_name":"glycogen metabolic process","termid":"GO:0005977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"positive regulation of glycogen metabolic process","synonyms":[{"name":"positive regulation of glycogen metabolism","type":"exact"}],"termid":"GO:0070875"}


id: PATO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female fertility","termid":"PATO:0000277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female fertile","termid":"PATO:0000888"}


id: PBO:0057218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378f","termid":"PBO:0057218"}


id: MONDO:0034968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ocular motility/alignment disorder (obsolete MONDO:0034968)","secondary_identifiers":["Orphanet:519355"],"termid":"MONDO:0034968","xrefs":{"Monarch":{"xref_id":"0034968"}}}


id: MONDO:0032841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usher syndrome, type 1M","secondary_identifiers":["MEDGEN:1684669","OMIM:618632","GARD:16370","UMLS:C5231434"],"synonyms":[{"name":"USH1M","type":"related"},{"name":"USHER SYNDROME, TYPE 1M","type":"related"}],"termid":"MONDO:0032841","xrefs":{"Monarch":{"xref_id":"0032841"}}}


id: GO:1903833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to amino acid starvation.","definition_xrefs":["GO_REF:0000058","PMID:7623840","PMID:25002487","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"},{"relation_name":"positively_regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to amino acid starvation","synonyms":[{"name":"activation of cellular response to amino acid starvation","type":"narrow"},{"name":"up regulation of cellular response to amino acid starvation","type":"exact"},{"name":"up-regulation of cellular response to amino acid starvation","type":"exact"},{"name":"upregulation of cellular response to amino acid starvation","type":"exact"}],"termid":"GO:1903833"}


id: GO:0090537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2L in mammals, which contain two ISWI homologs) and a CECR2 homolog. In mammals, CERF is involved in regulation of transcription from RNA polymerase II promoters.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CERF complex","termid":"GO:0090537"}


id: GO:2000187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inorganic anion transmembrane transport","termid":"GO:1903797"},{"relation_name":"is_a","term_name":"regulation of phosphate transmembrane transport","termid":"GO:2000185"},{"relation_name":"positively_regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phosphate transmembrane transport","synonyms":[{"name":"positive regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000187"}


id: PBO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 116","termid":"PBO:0044829"}


id: PBO:0053183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 8","termid":"PBO:0053183"}


id: MONDO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the bronchus","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchus cancer","secondary_identifiers":["SCTID:363493006","UMLS:C1322284","ICD9:162.9","DOID:1325","ICD9:162.8","MEDGEN:730206","NCIT:C156885"],"synonyms":[{"name":"bronchus cancer","type":"exact"},{"name":"cancer of bronchus","type":"exact"},{"name":"malignant bronchus neoplasm","type":"exact"},{"name":"malignant neoplasm of bronchus","type":"exact"},{"name":"malignant neoplasm of bronchus and lung","type":"narrow"},{"name":"malignant neoplasm of bronchus and lung, unspecified","type":"narrow"},{"name":"malignant neoplasm of bronchus or lung","type":"related"}],"termid":"MONDO:0001672","xrefs":{"Monarch":{"xref_id":"0001672"}}}


id: PBO:0089597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor","termid":"PBO:0089597"}


id: PBO:0059752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 26","termid":"PBO:0059752"}


id: PATO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's decreased rate of change of the position.","definition_xrefs":["PATOC:NV"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"velocity","termid":"PATO:0002242"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased velocity","termid":"PATO:0002472"}


id: PBO:0047833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P4","termid":"PBO:0047833"}


id: GO:0150178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["GOC:bc","PMID:30074985","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"}


id: SO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 3 modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059","SO:ke","EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_3_acetylation_site","synonyms":[{"name":"H3ac","type":"exact"},{"name":"histone 3 acetylation site","type":"exact"}],"termid":"SO:0001973"}


id: MONDO:0002331
data:
  {"annotated_genes":["SJAG_03361","SJAG_00864","SJAG_03182","SJAG_01374","SJAG_00933","SJAG_04000","SJAG_04148","SJAG_01185","SJAG_00093","SJAG_04017","SJAG_03986","SJAG_00471","SJAG_04621","SJAG_04013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[85452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[86257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[86182,86181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[86180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[86742,86743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[86739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[86266,86267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[85369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[86186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"Pathological processes of the KIDNEY without inflammatory or neoplastic components. Nephrosis may be a primary disorder or secondary complication of other diseases. It is characterized by the NEPHROTIC SYNDROME indicating the presence of PROTEINURIA and HYPOALBUMINEMIA with accompanying EDEMA.","definition_xrefs":["MESH:D009401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00471":null,"SJAG_00864":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_03986":null,"SJAG_04000":null,"SJAG_04013":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10223","UMLS:C0027720","DOID:2527"],"synonyms":[{"name":"Nephroses","type":"exact"}],"termid":"MONDO:0002331","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0026726":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0002331"}}}


id: SO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature stop codon is gained in an upstream open reading frame.","definition_xrefs":["PMID:32926138","PMID:32461616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:0002386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_gain_variant","synonyms":[{"name":"uSTOP_gained","type":"exact"}],"termid":"SO:0002388"}


id: PBO:0057020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 107","termid":"PBO:0057020"}


id: GO:0008467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucosaminyl-[heparan sulfate](n) + 3'-phosphoadenylyl sulfate = 3-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n) + adenosine 3',5'-bisphosphate + H+.","definition_xrefs":["RHEA:15461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"[heparan sulfate]-glucosamine 3-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076383","Reactome:R-HSA-2076611"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine 3-sulfotransferase","type":"broad"},{"name":"3'-phosphoadenylyl-sulfate:heparin-glucosamine 3-O-sulfotransferase activity","type":"related"},{"name":"3-OST activity","type":"related"},{"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity","type":"narrow"},{"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 2 activity","type":"narrow"},{"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 3 activity","type":"narrow"},{"name":"glucosaminyl 3-O-sulfotransferase activity","type":"related"},{"name":"heparan sulfate D-glucosaminyl 3-O-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine 3-O-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine 3-O-sulphotransferase activity","type":"related"}],"termid":"GO:0008467"}


id: GO:0106096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ceramide","termid":"GO:0106096"}


id: GO:0014742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle hypertrophy","termid":"GO:0014742"}


id: GO:0019044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The perpetuation of a latent state, generally by repressing the viruses own lytic genes expression and ensuring expression of viral genes which function to keep the viral genome from being detected by the host defense mechanisms.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral latency","termid":"GO:0019042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of viral latency","secondary_identifiers":["GO:0032360","GO:0075716"],"synonyms":[{"name":"latent virus maintenance","type":"exact"},{"name":"prophage maintenance","type":"exact"},{"name":"provirus maintenance","type":"exact"}],"termid":"GO:0019044"}


id: MONDO:0100321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A viral infectious disease that result from the presence and activity of a viral agent, or a disorder that follows infection with an viral agent but is distinct from the usual manifestations of the infection itself.","gene_count":0,"genotype_count":0,"name":"obsolete viral disease or post-viral disorder (obsolete MONDO:0100321)","synonyms":[{"name":"viral infectious disease or sequela","type":"exact"}],"termid":"MONDO:0100321","xrefs":{"Monarch":{"xref_id":"0100321"}}}


id: MONDO:0044251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete australia antigen (obsolete MONDO:0044251)","secondary_identifiers":["OMIM:209800"],"synonyms":[{"name":"Australia antigen","type":"related"}],"termid":"MONDO:0044251","xrefs":{"Monarch":{"xref_id":"0044251"}}}


id: PBO:0056488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial antiviral signaling protein","termid":"PBO:0056488"}


id: PBO:0002706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin depolymerizing factor, cofilin","termid":"PBO:0002706"}


id: PBO:0004760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase (predicted)","termid":"PBO:0004760"}


id: PBO:0061772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorant binding protein 2B","termid":"PBO:0061772"}


id: PBO:0038859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTSL4 antisense RNA 2","termid":"PBO:0038859"}


id: PR:O13641
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8D2.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase SPBC8D2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.16c","synonyms":[{"name":"Spom972h-SPBC8D2.16c","type":"exact"}],"termid":"PR:O13641"}


id: PBO:0056243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog B, exon junction complex subunit","termid":"PBO:0056243"}


id: SO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where recombination or occurs during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific_recombination_site","synonyms":[{"name":"specific recombination site","type":"exact"}],"termid":"SO:0000299"}


id: MONDO:0018413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to an anomaly of ovarian function of genetic origin (obsolete MONDO:0018413)","secondary_identifiers":["Orphanet:400022"],"termid":"MONDO:0018413","xrefs":{"Monarch":{"xref_id":"0018413"}}}


id: GO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of putrescine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine acetylation","termid":"GO:0032920"}


id: GO:0052002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of substance in host (obsolete GO:0052002)","termid":"GO:0052002"}


id: PBO:0051224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable IGHV8-51-1 (non-functional)","termid":"PBO:0051224"}


id: GO:0018569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydroquinone + O2 = cis,trans-4-hydroxymuconic semialdehyde.","definition_xrefs":["UM-BBD_reactionID:r0228"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroquinone 1,2-dioxygenase activity (obsolete GO:0018569)","termid":"GO:0018569"}


id: PBO:0077120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane domain containing 1","termid":"PBO:0077120"}


id: GO:1902818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethyl acetate.","definition_xrefs":["GOC:TermGenie","PMID:16013377","GOC:mengo_curators","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate metabolic process","synonyms":[{"name":"ethyl acetate metabolism","type":"exact"},{"name":"ethyl ethanoate metabolic process","type":"exact"}],"termid":"GO:1902818"}


id: GO:0051444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin transferase activity.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC inhibition","type":"narrow"},{"name":"APC inhibitor","type":"narrow"},{"name":"SCF complex inhibitor","type":"narrow"},{"name":"anaphase promoting complex inhibition","type":"narrow"},{"name":"anaphase promoting complex inhibitor","type":"narrow"},{"name":"anaphase-promoting complex inhibition","type":"narrow"},{"name":"anaphase-promoting complex inhibitor","type":"narrow"},{"name":"down regulation of ubiquitin transferase activity","type":"exact"},{"name":"down-regulation of ubiquitin transferase activity","type":"exact"},{"name":"downregulation of ubiquitin transferase activity","type":"exact"},{"name":"inhibition of ubiquitin transferase activity","type":"narrow"},{"name":"negative regulation of ubiquitin transferase activity","type":"exact"},{"name":"ubiquitin transferase inhibitor","type":"narrow"}],"termid":"GO:0051444"}


id: PBO:0028287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_mitotic_G2_DNA_damage_checkpoint_signaling","termid":"PBO:0028287"}


id: PBO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase 2","termid":"PBO:0048722"}


id: MONDO:0016829
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86894,86895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","definition":"A rare hereditary myopathic degeneration of both gastrointestinal and urinary tracts that causes chronic intestinal pseudo-obstruction. It usually presents after the first decade of life with megaduodenum, megacystis and symptoms such as abdominal distension and/or pain, vomiting, constipation, diarrhea, dysphagia, and/or urinary tract infections.n.","definition_xrefs":["Orphanet:2604"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete megacystis-microcolon-intestinal hypoperistalsis syndrome (obsolete MONDO:0007960)","termid":"MONDO:0007960"},{"relation_name":"is_a","term_name":"visceral myopathy 1","termid":"MONDO:0020754"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"familial visceral myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:120590","SCTID:63684002","UMLS:C0266833","ICD9:359.89","GARD:3443","icd11.foundation:1838806574"],"synonyms":[{"name":"familial hollow visceral myopathy","type":"exact"},{"name":"hereditary hollow visceral myopathy","type":"exact"},{"name":"megaduodenum and/or megacystis","type":"exact"},{"name":"pseudoobstruction idiopathic intestinal","type":"related"},{"name":"visceral myopathy familial","type":"related"}],"termid":"MONDO:0016829","terms_by_termid":{"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0016829"}}}


id: GO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"}


id: PBO:0068444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 18, pseudogene","termid":"PBO:0068444"}


id: MONDO:0010185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria, an inborn error of vitamin B12 (cobalamin) metabolism characterized by variable biochemical, neurological and hematological manifestations.","definition_xrefs":["Orphanet:79283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"},{"relation_name":"is_a","term_name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0004736","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria type cblD","secondary_identifiers":["UMLS:C1848552","DOID:0050716","MEDGEN:341253","NANDO:1200797","SCTID:31220004","GARD:3582","MESH:C564743","NANDO:2201108","OMIM:277410"],"synonyms":[{"name":"MAHCD","type":"related"},{"name":"Mehtylmalonic acidemia with homocystinuria cbI d","type":"related"},{"name":"cblD - cobalamin locus d","type":"related"},{"name":"cblD defect","type":"exact"},{"name":"cblD methylmalonic acidemia and homocystinuria","type":"related"},{"name":"cobalamin D defect","type":"exact"},{"name":"cobalamin D deficiency","type":"exact"},{"name":"cobalamin d disease","type":"exact"},{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis, type cblD","type":"exact"},{"name":"homocystinuria, cblD type, variant 1","type":"related"},{"name":"homocystinuria, cblD type, variant 1, included","type":"related"},{"name":"m0e.321 cobalamin locus d variant","type":"related"},{"name":"methylmalonic acidemia and homocystinuria, cblD type","type":"related"},{"name":"methylmalonic acidemia with homocystinuria type cblD","type":"related"},{"name":"methylmalonic acidemia with homocystinuria, type cblD","type":"related"},{"name":"methylmalonic acidemia, Cblh type","type":"related"},{"name":"methylmalonic acidemia, Cblh type, formerly","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblD","type":"exact"},{"name":"methylmalonic aciduria and homocystinuria, cblD type","type":"related"},{"name":"methylmalonic aciduria with homocystinuria, type cblD","type":"exact"},{"name":"methylmalonic aciduria, Cblh type","type":"related"},{"name":"methylmalonic aciduria, Cblh type, formerly","type":"related"},{"name":"methylmalonic aciduria, cblD type, variant 2","type":"related"},{"name":"methylmalonic aciduria, cblD type, variant 2, included","type":"related"}],"termid":"MONDO:0010185","xrefs":{"Monarch":{"xref_id":"0010185"}}}


id: MONDO:1012687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in dogs due to a mutation in the HEXA gene.","definition_xrefs":["OMIA:001461-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, dog","termid":"MONDO:1010840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXA-related, dog","synonyms":[{"name":"gangliosidosis, GM2, type I (B variant), dog","type":"related"}],"termid":"MONDO:1012687","xrefs":{"Monarch":{"xref_id":"1012687"}}}


id: GO:0071895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell of neural crest origin acquires the specialized features of an odontoblast, a cell on the outer surface of the dental pulp whose biological function is the creation of dentin.","definition_xrefs":["PMID:20425127","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontoblast differentiation","termid":"GO:0071895"}


id: GO:0003260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cardiac progenitor cell to form the heart field. Cardiac progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into cells of the heart. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart formation","termid":"GO:0060974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast migration","termid":"GO:0003260"}


id: GO:1905763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MTREC complex.","definition_xrefs":["PMID:26942678","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MTREC complex binding","synonyms":[{"name":"Mtl1-Red1 core complex binding","type":"exact"},{"name":"NURS complex binding","type":"exact"},{"name":"PAXT complex binding","type":"exact"}],"termid":"GO:1905763"}


id: PBO:0066258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 1","termid":"PBO:0066258"}


id: PBO:0074132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 33 member 1","termid":"PBO:0074132"}


id: PBO:0057463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 582","termid":"PBO:0057463"}


id: PBO:0003388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Pla1","termid":"PBO:0003388"}


id: GO:0047085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetonitrile + H+ + NADPH + O2 = 4-hydroxymandelonitrile + H2O + NADP+.","definition_xrefs":["RHEA:50732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxyphenylacetonitrile 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02708","MetaCyc:1.14.13.42-RXN"],"synonyms":[{"name":"4-hydroxyphenylacetonitrile hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile monooxygenase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"exact"}],"termid":"GO:0047085"}


id: PBO:0011505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II, multifunctional enzyme (predicted)","termid":"PBO:0011505"}


id: FYPO:0003996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA primase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000002","FYPO:0000294","FYPO:0000293","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0005447"],"is_obsolete":false,"name":"abolished DNA primase activity","synonyms":[{"name":"DNA primase activity abolished","type":"exact"}],"termid":"FYPO:0003996"}


id: GO:0033674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorylation","termid":"GO:0042327"},{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"},{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kinase activity","synonyms":[{"name":"kinase activator","type":"narrow"},{"name":"stimulation of kinase activity","type":"narrow"},{"name":"up regulation of kinase activity","type":"exact"},{"name":"up-regulation of kinase activity","type":"exact"},{"name":"upregulation of kinase activity","type":"exact"}],"termid":"GO:0033674"}


id: PBO:0046380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENY2 transcription and export complex 2 subunit","termid":"PBO:0046380"}


id: GO:0046108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"uridine metabolic process","synonyms":[{"name":"uridine metabolism","type":"exact"}],"termid":"GO:0046108"}


id: PBO:0039076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 4","termid":"PBO:0039076"}


id: PBO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga1","termid":"PBO:0036487"}


id: GO:0034762
data:
  {"annotated_genes":["SJAG_05346","SJAG_00991","SJAG_00296","SJAG_04920","SJAG_03631","SJAG_03591","SJAG_02605","SJAG_04551","SJAG_04469","SJAG_03970","SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91556,113670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[88432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[88433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[102464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[90268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[92080,93674,99204,110851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[92081,93675,99205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[99720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[106711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03631":null,"SJAG_03970":null,"SJAG_04469":null,"SJAG_04551":null,"SJAG_04920":null,"SJAG_04990":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of membrane transport","type":"exact"}],"termid":"GO:0034762","terms_by_termid":{"GO:0035432":null,"GO:1902267":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null,"GO:1905949":null,"GO:2000185":null}}


id: GO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hepatocyte growth factor","synonyms":[{"name":"response to HGF stimulus","type":"exact"},{"name":"response to hepatocyte growth factor stimulus","type":"exact"}],"termid":"GO:0035728"}


id: MONDO:0002691
data:
  {"annotated_genes":["SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"An epithelial or non-epithelial malignant neoplasm that arises from the liver. Representative examples include hepatocellular carcinoma, intrahepatic cholangiocarcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C34803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02049":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"liver cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:93870000","UMLS:C0345904","ICD9:155.0","DOID:3571","MEDGEN:87520","ICD9:155.2"],"synonyms":[{"name":"Ca liver - primary","type":"exact"},{"name":"Resectable malignant neoplasm of liver","type":"exact"},{"name":"ca liver - primary","type":"exact"},{"name":"cancer of liver","type":"exact"},{"name":"hepatic cancer","type":"exact"},{"name":"hepatic neoplasm","type":"exact"},{"name":"liver cancer","type":"exact"},{"name":"malignant hepato-biliary neoplasm","type":"exact"},{"name":"malignant liver neoplasm","type":"exact"},{"name":"malignant neoplasm of liver","type":"exact"},{"name":"malignant neoplasm of liver, not specified as primary or secondary","type":"exact"},{"name":"malignant neoplasm of liver, primary","type":"exact"},{"name":"malignant tumor of liver","type":"exact"},{"name":"malignant tumour of liver","type":"exact"},{"name":"non-resectable primary hepatic malignant neoplasm","type":"exact"},{"name":"primary cancer of liver","type":"related"},{"name":"primary liver cancer","type":"exact"},{"name":"primary malignant liver neoplasm","type":"exact"},{"name":"primary malignant neoplasm of liver","type":"exact"},{"name":"primary tumor of the liver","type":"related"},{"name":"primary tumour of the liver","type":"related"},{"name":"resectable malignant neoplasm of the liver","type":"exact"}],"termid":"MONDO:0002691","terms_by_termid":{"MONDO:0007256":null},"xrefs":{"Monarch":{"xref_id":"0002691"}}}


id: GO:1900887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pentadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"pentadecane biosynthetic process","termid":"GO:1900634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pentadecane biosynthetic process","synonyms":[{"name":"regulation of pentadecane anabolism","type":"exact"},{"name":"regulation of pentadecane biosynthesis","type":"exact"},{"name":"regulation of pentadecane formation","type":"exact"},{"name":"regulation of pentadecane synthesis","type":"exact"}],"termid":"GO:1900887"}


id: SO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence assembly derived from expressed sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_assembly","synonyms":[{"name":"expressed sequence assembly","type":"exact"}],"termid":"SO:0001428"}


id: MONDO:0006721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stenosing tenosynovitis of the abductor pollicis longus and extensor pollicis brevis tendons in the first dorsal wrist compartment. The presenting symptoms are usually pain and tenderness at the radial styloid. The cause is almost always related to overuse injury or is associated with rheumatoid arthritis.","definition_xrefs":["MESH:D053684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de Quervain disease","secondary_identifiers":["DOID:14107","EFO:1000891","MEDGEN:101771","ICD9:727.04","UMLS:C0149870","SCTID:21794005"],"synonyms":[{"name":"radial styloid tenosynovitis","type":"exact"},{"name":"tenosynovitis, de Quervain's","type":"exact"}],"termid":"MONDO:0006721","xrefs":{"Monarch":{"xref_id":"0006721"}}}


id: MONDO:0012193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant limb-girdle muscular dystrophy (LGMD1G) is a mild subtype of autosomal dominant limb-girdle muscular dystrophy characterized by a typically adult onset of mild, progressive, proximal weakness of pelvic and shoulder girdle muscles and progressive, permanent finger and toes flexion limitation without flexion contractures. Normal to highly elevated creatine kinase serum levels are observed.","definition_xrefs":["Orphanet:55596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336"],"is_obsolete":false,"name":"autosomal dominant limb-girdle muscular dystrophy type 1G","secondary_identifiers":["DOID:0110306","MEDGEN:322993","UMLS:C1836765","MESH:C563794","OMIM:609115","SCTID:719990003","GARD:12531"],"synonyms":[{"name":"HNRNPDL autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD1G","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in HNRNPDL","type":"exact"},{"name":"limb-girdle muscular dystrophy type 1G","type":"related"},{"name":"limb-girdle muscular dystrophy, type 1G","type":"related"},{"name":"muscular dystrophy limb-girdle type 1G","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant 3","type":"exact"}],"termid":"MONDO:0012193","xrefs":{"Monarch":{"xref_id":"0012193"}}}


id: FYECO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing maltose as the carbon source, yeast extract and other components.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose YE","synonyms":[{"name":"maltose rich medium","type":"broad"}],"termid":"FYECO:0000236"}


id: MONDO:0022171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by the secretion of colored sweat, caused by the deposition of lipofuscin in the sweat glands. Usually chromhidrosis affects the apocrine glands, mainly on the face and underarms.","definition_xrefs":["Wikipedia:Chromhidrosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chromhidrosis","secondary_identifiers":["icd11.foundation:864449620","UMLS:C0263473","ICD9:705.89","ICD10CM:L75.1","MEDGEN:82667","SCTID:26147006"],"synonyms":[{"name":"chromhidrosis","type":"exact"},{"name":"secretion of colored sweat","type":"related"},{"name":"secretion of coloured sweat","type":"related"}],"termid":"MONDO:0022171","xrefs":{"Monarch":{"xref_id":"0022171"}}}


id: PBO:0040130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB15 antisense RNA 1","termid":"PBO:0040130"}


id: PBO:0073297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 19","termid":"PBO:0073297"}


id: PBO:0000125
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sim Four and mal Two Associated protein","termid":"PBO:0000125"}


id: GO:0009104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide catabolic process","synonyms":[{"name":"LPS catabolic process","type":"exact"},{"name":"lipopolysaccharide breakdown","type":"exact"},{"name":"lipopolysaccharide catabolism","type":"exact"},{"name":"lipopolysaccharide degradation","type":"exact"}],"termid":"GO:0009104"}


id: PBO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.2","termid":"PBO:0003807"}


id: MONDO:1012268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, cattle","secondary_identifiers":["OMIA:000991-9913"],"synonyms":[{"name":"AIS, cattle","type":"exact"}],"termid":"MONDO:1012268","xrefs":{"Monarch":{"xref_id":"1012268"}}}


id: PBO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member F","termid":"PBO:0047263"}


id: FYPO:0004513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of latrunculin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to latrunculin A","synonyms":[{"name":"resistance to LatA","type":"exact"},{"name":"resistance to latrunculin A during mitotic cell cycle","type":"related"},{"name":"resistance to latrunculin A during vegetative growth","type":"exact"},{"name":"resistant to latrunculin A","type":"exact"}],"termid":"FYPO:0004513"}


id: PBO:0079414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 8","termid":"PBO:0079414"}


id: PBO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rhp51","termid":"PBO:0003697"}


id: GO:0030447
data:
  {"annotated_genes":["SJAG_04312","SJAG_01181","SJAG_00993","SJAG_00124"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74744,76491],"is_not":false,"summary":null,"term":"GO:0030447"},{"annotations":[119697,119696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"The process in which a multicellular organism, a unicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:mcc","PMID:11729141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth","references_by_uniquename":{"GO_REF:0000033":null,"PMID:34427722":null},"termid":"GO:0030447","terms_by_termid":{"GO:0030447":null,"GO:0030448":null}}


id: MOD:01953
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a four-iron cluster to tetrakis-L-cysteinyl tetrairon octanitrosyl.","definition_xrefs":["RESID:AA0599","PubMed:21182249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl tetrairon octanitrosyl","termid":"MOD:01953"}


id: GO:0099163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling to or from a synapse, mediated by nitric oxide.","definition_xrefs":["PMID:19038221","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic signaling by nitric oxide","termid":"GO:0099163"}


id: PBO:0063466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor like 2, pseudogene","termid":"PBO:0063466"}


id: PBO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroguidin","termid":"PBO:0060977"}


id: MONDO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metaphyseal dysplasia (obsolete MONDO:0000841)","termid":"MONDO:0000841","xrefs":{"Monarch":{"xref_id":"0000841"}}}


id: GO:0033186
data:
  {"annotated_genes":["SJAG_02439","SJAG_04272","SJAG_02198"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73423,95154,108039],"is_not":false,"summary":null,"term":"GO:0033186"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). In many species the CAF-1 subunits are designated p150, p60, and p48.","definition_xrefs":["PMID:17065558","PMID:17083276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02198":null,"SJAG_02439":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CAF-1 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromatin assembly factor 1 complex","type":"exact"}],"termid":"GO:0033186","terms_by_termid":{"GO:0033186":null}}


id: MOD:01696
data:
  {"annotated_genes":["SJAG_02522","SJAG_00733"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[81079,80995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"is_obsolete":false,"name":"alpha-amino acylated residue","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:01696","terms_by_termid":{"MOD:00050":null}}


id: PBO:0075849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 1","termid":"PBO:0075849"}


id: MONDO:0018555
data:
  {"annotated_genes":["SJAG_04110","SJAG_04398","SJAG_02829","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[85852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"Abnormal ovarian or testicular function due to insufficient hormonal stimulation from the hypothalamic-pituitary axis.","definition_xrefs":["NCIT:C113347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0000044","Orphanet:432","NANDO:1200388","GARD:16533","MEDGEN:82883","OMIMPS:147950","SCTID:33927004","ICD10CM:E23.0","ICD9:253.4","NANDO:2100138","DOID:0090070","NANDO:2200382","UMLS:C0271623","DOID:7455"],"synonyms":[{"name":"Normosmic idiopathic hypogonadotropic hypogonadism","type":"exact"},{"name":"central hypogonadism","type":"exact"},{"name":"congenital idiopathic hypogonadotropic hypogonadism","type":"narrow"},{"name":"gonadotropic deficiency","type":"exact"},{"name":"hypogonadism, hypogonadotropic","type":"exact"},{"name":"hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism with or without anosmia","type":"exact"},{"name":"hypogonadotropism","type":"related"},{"name":"isolated congenital gonadotropin deficiency","type":"narrow"},{"name":"isolated hypogonadotropic hypogonadism","type":"related"},{"name":"low gonadotropins (secondary hypogonadism)","type":"exact"},{"name":"nIHH","type":"exact"},{"name":"normosmic congenital hypogonadotropic hypogonadism","type":"exact"},{"name":"secondary hypogonadism","type":"exact"}],"termid":"MONDO:0018555","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null},"xrefs":{"Monarch":{"xref_id":"0018555"}}}


id: PBO:0040534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 1","termid":"PBO:0040534"}


id: MONDO:0030856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 89","secondary_identifiers":["GARD:16424","MEDGEN:1761611","DOID:0112223","OMIM:619124","UMLS:C5436853"],"synonyms":[{"name":"DEE89","type":"exact"},{"name":"developmental and epileptic encephalopathy 89","type":"exact"}],"termid":"MONDO:0030856","xrefs":{"Monarch":{"xref_id":"0030856"}}}


id: PBO:0067936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 238","termid":"PBO:0067936"}


id: PBO:0084554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084554"}


id: GO:0051555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonols, a member of a class of vascular pigments formed by consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"flavonol metabolic process","termid":"GO:0051554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonol biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3101"],"termid":"GO:0051555"}


id: PBO:0045383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP4 divergent transcript","termid":"PBO:0045383"}


id: FYPO:0006917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of mitosis begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal onset of mitotic metaphase/anaphase transition","synonyms":[{"name":"normal duration of metaphase during mitosis","type":"related"},{"name":"normal duration of mitotic metaphase","type":"related"},{"name":"normal onset of metaphase/anaphase transition of mitotic nuclear division","type":"exact"},{"name":"normal timing of mitotic metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0006917"}


id: GO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosphingolipid and lysophosphatidic acid receptor activity (obsolete GO:0001619)","synonyms":[{"name":"lysosphingolipid and lysophosphatidic acid receptor activity","type":"exact"}],"termid":"GO:0001619"}


id: PR:O74732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-keto-steroid reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24316:SF97","OMA:SCHPO02720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto-steroid reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.07","secondary_identifiers":["UniProtKB:O74732"],"synonyms":[{"name":"Spom972h-HSD17B7","type":"exact"}],"termid":"PR:O74732"}


id: PBO:0092018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uaa), mitochondrial","termid":"PBO:0092018"}


id: PBO:0072660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 2","termid":"PBO:0072660"}


id: PBO:0003528
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localization dependent on F-actin","termid":"PBO:0003528"}


id: PBO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20, pseudogene","termid":"PBO:0047017"}


id: FYPO:0005475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is normal length but has a larger volume than normal.","definition_xrefs":["PomBase:mah","PMID:9459302"],"direct_ancestors":[{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0001985","FYPO:0000257"],"is_obsolete":false,"name":"swollen vegetative cell with normal cell length","synonyms":[{"name":"normal length cell with increased cell volume","type":"exact"},{"name":"swollen cell with normal cell length during vegetative growth","type":"exact"},{"name":"swollen vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"swollen, normal length vegetative cell","type":"exact"}],"termid":"FYPO:0005475"}


id: GO:0062125
data:
  {"annotated_genes":["SJAG_01517","SJAG_01249","SJAG_03550"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112981,99031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[100782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).","definition_xrefs":["PMID:28285835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"regulates","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_03550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial gene expression","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062125","terms_by_termid":{"GO:0070131":null,"GO:0070134":null}}


id: PBO:0040422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit d2","termid":"PBO:0040422"}


id: PATO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a trumpet.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trumpet-shaped","termid":"PATO:0002375"}


id: GO:0060578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior vena cava morphogenesis","termid":"GO:0060578"}


id: PBO:0040320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit delta","termid":"PBO:0040320"}


id: MONDO:0012852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 10q23-q24.","definition_xrefs":["PMID:10053016","DOID:0110898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 20","secondary_identifiers":["OMIM:612288","MESH:C567361","MEDGEN:394126","UMLS:C2676781"],"synonyms":[{"name":"IBD20","type":"exact"},{"name":"inflammatory bowel disease 20","type":"exact"},{"name":"inflammatory bowel disease type 20","type":"exact"}],"termid":"MONDO:0012852","xrefs":{"Monarch":{"xref_id":"0012852"}}}


id: SO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methyladenosine","secondary_identifiers":["RNAMOD:002"],"synonyms":[{"name":"2-methyladenosine","type":"exact"},{"name":"m2A","type":"exact"},{"name":"two methyladenosine","type":"exact"}],"termid":"SO:0001296"}


id: PBO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036052"}


id: PBO:0081326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 117","termid":"PBO:0081326"}


id: PBO:0054937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2351","termid":"PBO:0054937"}


id: PBO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_direct_regulator_(obsolete_requires_direct_regulator)","termid":"PBO:0034417"}


id: _global:maximally_overlaps
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A maximally_overlaps X iff all parts of A (including A itself) overlap both A and Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maximally_overlaps","termid":"_global:maximally_overlaps"}


id: MONDO:0012443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 4","secondary_identifiers":["OMIM:610213","UMLS:C1857749","MESH:C565700","GARD:18323","DOID:0080967","MEDGEN:341838"],"synonyms":[{"name":"ANIB4","type":"exact"},{"name":"aneurysm, intracranial BERRY, 4","type":"related"}],"termid":"MONDO:0012443","xrefs":{"Monarch":{"xref_id":"0012443"}}}


id: GO:0035689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by chemokine CCL5 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18337562","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 signaling pathway","synonyms":[{"name":"CCL5-mediated signaling pathway","type":"exact"},{"name":"RANTES-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 5 signalling pathway","type":"exact"}],"termid":"GO:0035689"}


id: PBO:0085051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; expression induced in response to heat stress; FUN19 has a paralog, YOR338W, that arose from the whole genome duplication","termid":"PBO:0085051"}


id: GO:0019311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"sorbose metabolic process","synonyms":[{"name":"sorbose metabolism","type":"exact"}],"termid":"GO:0019311"}


id: PBO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0000190"}


id: PBO:0042375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200R1L antisense RNA 1","termid":"PBO:0042375"}


id: FYPO:0002650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the kinetochore is divided into two or more parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal kinetochore morphology during vegetative growth","termid":"FYPO:0000050"},{"relation_name":"is_a","term_name":"split kinetochore","termid":"FYPO:0005647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"split kinetochore during vegetative growth","synonyms":[{"name":"split kinetochore during mitotic cell cycle","type":"related"},{"name":"split kinetochores during vegetative growth","type":"exact"}],"termid":"FYPO:0002650"}


id: GO:0160074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex containing CASP4, known as caspase-11 (Casp11) in mouse, which assembles upon cytosolic lipopolysaccharide-binding and directly activates Gasdermin-D (GSDMD).","definition_xrefs":["PMID:33187725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"non-canonical inflammasome complex","termid":"GO:0160074"}


id: GO:0042634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair.","definition_xrefs":["GOC:go_curators","PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hair cycle","termid":"GO:0042633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair cycle","termid":"GO:0042634"}


id: GO:0039585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with activation and autophosphorylation of PKR (also known as EIF2AK2), which phosphorylates proteins including the translation initiation factor eIF2 to inhibit translation. PKR is activated by stress signals and during the antiviral response, activated by binding to viral double-stranded RNA (dsRNA) leading to inhibition of protein synthesis during viral infection.","definition_xrefs":["PMID:22102852","PMID:21204021","PMID:27629041","PMID:9843495","VZ:1576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"PKR/eIFalpha signaling","secondary_identifiers":["Reactome:R-HSA-9833482"],"synonyms":[{"name":"EIF2AK2 signal transduction","type":"exact"},{"name":"EIF2AK2/PRK signaling","type":"exact"},{"name":"PKR signal transduction","type":"exact"},{"name":"PKR signaling pathway","type":"exact"},{"name":"signaling through PKR","type":"exact"}],"termid":"GO:0039585"}


id: PBO:0064335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR4 pseudogene 1","termid":"PBO:0064335"}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: PBO:0088273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase/ ubiquitin-protein ligase E3 Irc20","termid":"PBO:0088273"}


id: PBO:0113383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein, involved in salt tolerance; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YMR253C is not an essential gene","termid":"PBO:0113383"}


id: GO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle formation","synonyms":[{"name":"metanephros formation","type":"exact"}],"termid":"GO:0072093"}


id: PBO:0059677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 43","termid":"PBO:0059677"}


id: GO:0043834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Co(I)-[trimethylamine-specific corrinoid protein] + H+ + trimethylamine = dimethylamine + methyl-Co(III)-[trimethylamine-specific corrinoid protein].","definition_xrefs":["RHEA:39287","PMID:9006042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trimethylamine methyltransferase activity","secondary_identifiers":["EC:2.1.1.250","MetaCyc:RXN-8102"],"synonyms":[{"name":"MT1","type":"broad"},{"name":"TMA methyltransferase 1","type":"exact"},{"name":"mttB1","type":"related"},{"name":"trimethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"},{"name":"trimethylamine:corrinoid methyltransferase activity","type":"exact"}],"termid":"GO:0043834"}


id: MONDO:0020131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the cerebellar hemispheres (obsolete MONDO:0020131)","secondary_identifiers":["Orphanet:98516"],"termid":"MONDO:0020131","xrefs":{"Monarch":{"xref_id":"0020131"}}}


id: PBO:0061180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 10-1","termid":"PBO:0061180"}


id: PBO:0080534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 5","termid":"PBO:0080534"}


id: PBO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10","termid":"PBO:0043760"}


id: PBO:0067134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 182, pseudogene","termid":"PBO:0067134"}


id: MONDO:0002468
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deficiency","termid":"MONDO:0002211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyperimmunoglobulin syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1334069","MEDGEN:272730","NCIT:C27579","DOID:2959"],"synonyms":[{"name":"hyperimmunoglobulin syndrome","type":"exact"}],"termid":"MONDO:0002468","terms_by_termid":{"MONDO:0011971":null},"xrefs":{"Monarch":{"xref_id":"0002468"}}}


id: PBO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030118"}


id: PR:Q9HGM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04078","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.06c","secondary_identifiers":["UniProtKB:Q9HGM5"],"synonyms":[{"name":"Spom972h-DDX49","type":"exact"}],"termid":"PR:Q9HGM5"}


id: GO:0070309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a lens fiber cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lens morphogenesis in camera-type eye","termid":"GO:0002089"},{"relation_name":"part_of","term_name":"lens fiber cell development","termid":"GO:0070307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell morphogenesis","synonyms":[{"name":"elongation of lens fiber cell","type":"narrow"},{"name":"lens fiber cell morphogenesis during differentiation","type":"exact"},{"name":"lens fibre cell morphogenesis","type":"exact"}],"termid":"GO:0070309"}


id: PBO:0110198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.1","termid":"PBO:0110198"}


id: GO:0032804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor catabolic process","termid":"GO:0032803"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"negative regulation of receptor catabolic process","termid":"GO:2000645"},{"relation_name":"negatively_regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"down regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"inhibition of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"negative regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor degradation","type":"exact"}],"termid":"GO:0032804"}


id: PBO:0056575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK regulated corepressor interacting protein 2 pseudogene 2","termid":"PBO:0056575"}


id: GO:0030137
data:
  {"annotated_genes":["SJAG_02160","SJAG_02234","SJAG_04391","SJAG_01025","SJAG_04474","SJAG_04002","SJAG_00192","SJAG_01927","SJAG_03368","SJAG_04569","SJAG_01508","SJAG_02482","SJAG_01285","SJAG_04402","SJAG_04070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91946,93482,99843,114442],"is_not":false,"summary":null,"term":"GO:0030137"},{"annotations":[64398,80248,93569,98776,73879,71251,107439,78399,78745],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[96382,98088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030663"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport.","definition_xrefs":["GOC:mah","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi-associated vesicle","termid":"GO:0005798"},{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_01025":null,"SJAG_01285":null,"SJAG_01508":null,"SJAG_01927":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02482":null,"SJAG_03368":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04569":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"COPI-coated vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"coatomer","type":"related"}],"termid":"GO:0030137","terms_by_termid":{"GO:0030126":null,"GO:0030137":null,"GO:0030663":null}}


id: GO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed orientation of natural killer cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with a cell displaying natural killer cell activating ligands.","definition_xrefs":["PMID:12615886","GOC:mgi_curators","PMID:9759849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of lymphocyte polarity","termid":"GO:0001767"},{"relation_name":"part_of","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of natural killer cell polarity","synonyms":[{"name":"NK cell polarization","type":"exact"},{"name":"establishment of NK cell polarity","type":"exact"},{"name":"natural killer cell polarization","type":"exact"}],"termid":"GO:0001770"}


id: GO:0048265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli.","definition_xrefs":["PMID:12843304","PMID:10203867","GOC:jid","PMID:12723742","Wikipedia:Pain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pain","secondary_identifiers":["GO:0048267"],"synonyms":[{"name":"physiological response to pain","type":"exact"}],"termid":"GO:0048265"}


id: PATO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Extremely acute and aggressive onset of a pathological process.","definition_xrefs":["PATOC:PNS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute","termid":"PATO:0000389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peracute","synonyms":[{"name":"per-acute","type":"exact"}],"termid":"PATO:0002387"}


id: MONDO:0006168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete common hematopoietic neoplasm (obsolete MONDO:0006168)","termid":"MONDO:0006168","xrefs":{"Monarch":{"xref_id":"0006168"}}}


id: PBO:0076150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUFU negative regulator of hedgehog signaling","termid":"PBO:0076150"}


id: PBO:0062534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 3 pseudogene","termid":"PBO:0062534"}


id: PBO:0088820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L29","termid":"PBO:0088820"}


id: PBO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav2","termid":"PBO:0003799"}


id: PBO:0078696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 7-1","termid":"PBO:0078696"}


id: PBO:0089798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal complex subunit","termid":"PBO:0089798"}


id: MONDO:0016493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete variant of Guillain-Barre syndrome (obsolete MONDO:0016493)","secondary_identifiers":["Orphanet:231413"],"synonyms":[{"name":"variant of GBS","type":"exact"},{"name":"variant of Guillain-Barré syndrome","type":"related"}],"termid":"MONDO:0016493","xrefs":{"Monarch":{"xref_id":"0016493"}}}


id: PBO:0081153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP91 pseudogene 1","termid":"PBO:0081153"}


id: GO:0011000
data:
  {"annotated_genes":["SJAG_03997","SJAG_04671","SJAG_02724","SJAG_03097"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99687,103545,106953,108832],"is_not":false,"summary":null,"term":"GO:0011000"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the mating type locus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02724":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"replication fork arrest at mating type locus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0011000","terms_by_termid":{"GO:0011000":null}}


id: GO:0010307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetylglutamate kinase.","definition_xrefs":["PMID:16377628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"acetylglutamate kinase regulator activity","termid":"GO:0010307"}


id: PBO:0089160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16","termid":"PBO:0089160"}


id: GO:0010782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the proboscis that are derived from the labial disc are generated and organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"labial disc morphogenesis","termid":"GO:0007454"},{"relation_name":"part_of","term_name":"proboscis morphogenesis","termid":"GO:0048734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis morphogenesis, labial disc-derived","termid":"GO:0010782"}


id: GO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaM subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alphaM-beta2 complex","synonyms":[{"name":"Itgam-Itgb2 complex","type":"narrow"},{"name":"alphaM-beta2 integrin complex","type":"exact"}],"termid":"GO:0034688"}


id: GO:0000708
data:
  {"annotated_genes":["SJAG_02267","SJAG_01708","SJAG_03221","SJAG_04950","SJAG_03751","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99384,107980,110617],"is_not":false,"summary":null,"term":"GO:0000708"},{"annotations":[79259,88824,100872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules. This occurs during meiosis.","definition_xrefs":["GOC:elh","PMID:10915877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand invasion","termid":"GO:0042148"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"meiotic strand invasion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop biosynthesis","type":"related"},{"name":"meiotic D-loop formation","type":"related"},{"name":"meiotic displacement loop biosynthesis","type":"related"},{"name":"meiotic displacement loop formation","type":"related"}],"termid":"GO:0000708","terms_by_termid":{"GO:0000708":null,"GO:0010774":null}}


id: PBO:0038829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 2","termid":"PBO:0038829"}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: GO:1990422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxal + H2O = glycolic acid. Catalysis occurs in the absence of a cofactor.","definition_xrefs":["PMID:22523093","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"glyoxalase (glycolic acid-forming) activity","termid":"GO:1990422"}


id: GO:0099022
data:
  {"annotated_genes":["SJAG_02320","SJAG_03938","SJAG_03357","SJAG_03005","SJAG_04960","SJAG_01925","SJAG_02166","SJAG_03864","SJAG_04044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118737],"is_not":false,"summary":null,"term":"GO:0099022"},{"annotations":[118028,66290,99875,114463,60328,91086,102241,88965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The initial, indirect interaction between a vesicle membrane and a membrane to which it is targeted for fusion. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior to interaction between factors involved in fusion.","definition_xrefs":["PMID:27243008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"vesicle targeting","termid":"GO:0006903"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle tethering","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0099022","terms_by_termid":{"GO:0090522":null,"GO:0099022":null}}


id: FYPO:0006888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type) when the cell is subject to iron ion starvation.","definition_xrefs":["PMID:29549126","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to plasma membrane","termid":"FYPO:0002674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to plasma membrane during iron starvation","synonyms":[{"name":"normal protein localisation to plasma membrane during iron starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron ion starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006888"}


id: MONDO:0008317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolytic capacity of plasma","secondary_identifiers":["MEDGEN:401269","OMIM:176900","UMLS:C1867621"],"synonyms":[{"name":"proteolytic capacity of plasma","type":"exact"}],"termid":"MONDO:0008317","xrefs":{"Monarch":{"xref_id":"0008317"}}}


id: MONDO:0004487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of endometrial type glands and endometrial stroma, surrounded by smooth muscle. There is no evidence of atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial type cervical adenomyoma","secondary_identifiers":["NCIT:C40233","DOID:8178"],"synonyms":[{"name":"cervical adenomyoma, endometrial type","type":"exact"}],"termid":"MONDO:0004487","xrefs":{"Monarch":{"xref_id":"0004487"}}}


id: MONDO:0100518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of attention deficit-hyperactivity disorder that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary attention deficit-hyperactivity disorder","secondary_identifiers":["OMIM:143465"],"termid":"MONDO:0100518","xrefs":{"Monarch":{"xref_id":"0100518"}}}


id: GO:0033052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanoamino acids, amino acid derivatives that contain a cyanide group.","definition_xrefs":["PMID:11575729","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"cyanoamino acid metabolic process","synonyms":[{"name":"cyanoamino acid metabolism","type":"exact"}],"termid":"GO:0033052"}


id: PBO:0074511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A3","termid":"PBO:0074511"}


id: PBO:0046044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C","termid":"PBO:0046044"}


id: PBO:0005433
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as Med9","termid":"PBO:0005433"}


id: GO:0008568
data:
  {"annotated_genes":["SJAG_04566","SJAG_01530"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96858,113089],"is_not":false,"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP.","definition_xrefs":["PMID:10910766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"microtubule destabilizing activity","termid":"GO:0170060"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"microtubule severing ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9668419","MetaCyc:3.6.4.3-RXN","EC:5.6.1.1"],"synonyms":[{"name":"ATP phosphohydrolase (tubulin-dimerizing)","type":"exact"},{"name":"katanin activity","type":"narrow"},{"name":"microtubule-severing ATPase activity","type":"exact"}],"termid":"GO:0008568","terms_by_termid":{"GO:0008568":null}}


id: PBO:0081674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 595","termid":"PBO:0081674"}


id: GO:0150189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-32 production.","definition_xrefs":["GOC:aruk","PMID:23729669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-32 production","termid":"GO:0072637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-32 production","secondary_identifiers":["GO:0150192"],"synonyms":[{"name":"regulation of interleukin-32 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-32 secretion","type":"narrow"}],"termid":"GO:0150189"}


id: MONDO:0008520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-elbow wrist dysplasia syndrome is a rare, genetic bone development disorder characterized by dysplasia of all the bony components of the elbow joint, abnormally shaped carpal bones, wrist joint radial deviation and brachydactyly. Patients typically present with slight flexion at the elbow joints (with impossibility to perform active extension) and usually associate a limited range of motion of the elbow, wrist and finger articulations. Camptodactyly and syndactyly have also been reported.","definition_xrefs":["Orphanet:1275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactyly-elbow wrist dysplasia syndrome","secondary_identifiers":["MEDGEN:396103","MESH:C566090","UMLS:C1861313","GARD:966","SCTID:764437006","OMIM:186550"],"synonyms":[{"name":"LBNBG","type":"related"},{"name":"LIEBENBERG syndrome","type":"related"},{"name":"Liebenberg syndrome","type":"exact"},{"name":"brachydactyly elbow wrist dysplasia","type":"related"},{"name":"brachydactyly with Joint dysplasia","type":"related"},{"name":"brachydactyly with joint dysplasia","type":"related"},{"name":"brachydactyly-joint dysplasia syndrome","type":"exact"},{"name":"carpal synostosis with dysplastic elbow joints and brachydactyly","type":"related"},{"name":"synostosis, carpal, with dysplastic elbow joints and brachydactyly","type":"related"}],"termid":"MONDO:0008520","xrefs":{"Monarch":{"xref_id":"0008520"}}}


id: PBO:0057871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-4","termid":"PBO:0057871"}


id: GO:0021568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:curators","GOC:cls","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 development","termid":"GO:0021568"}


id: MONDO:0010606
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87140],"is_not":false,"summary":null,"term":"MONDO:0010606"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diaphragmatic hernia","termid":"MONDO:0005711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"is_obsolete":false,"name":"hernia, anterior diaphragmatic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:334881","OMIM:306950","MESH:C564413","UMLS:C1844025","GARD:15295"],"synonyms":[{"name":"hernia, anterior diaphragmatic","type":"exact"}],"termid":"MONDO:0010606","terms_by_termid":{"MONDO:0010606":null},"xrefs":{"Monarch":{"xref_id":"0010606"}}}


id: PBO:0073549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHANK2 antisense RNA 1","termid":"PBO:0073549"}


id: GO:0120540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification, often by sulfation, of sugars in the polysaccharide chain component of chondroitin sulfate proteoglycans.","definition_xrefs":["PMID:38500384"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate proteoglycan biosynthetic process, enzymatic modification (obsolete GO:0120540)","termid":"GO:0120540"}


id: FYPO:0004595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex assembly","synonyms":[{"name":"abnormal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004595"}


id: GO:0051732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NTP + 5'-dephospho-RNA = NDP + 5'-phospho-RNA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete polyribonucleotide kinase activity (obsolete GO:0051732)","synonyms":[{"name":"5'-hydroxyl RNA kinase activity","type":"exact"},{"name":"5'-hydroxyl polyribonucleotide kinase activity","type":"exact"},{"name":"RNA 5'-hydroxyl kinase activity","type":"exact"},{"name":"RNA kinase activity","type":"exact"}],"termid":"GO:0051732"}


id: PBO:0073623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 9","termid":"PBO:0073623"}


id: MONDO:0021538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma that involves the oral cavity.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"verrucous carcinoma of oral cavity","secondary_identifiers":["NCIT:C8174","UMLS:C0280306","MEDGEN:124716","SCTID:403889000"],"synonyms":[{"name":"mouth verrucous carcinoma","type":"exact"},{"name":"oral cavity verrucous cancer","type":"exact"},{"name":"oral cavity verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of mouth","type":"exact"},{"name":"verrucous carcinoma of the mouth","type":"exact"},{"name":"verrucous carcinoma of the oral cavity","type":"exact"}],"termid":"MONDO:0021538","xrefs":{"Monarch":{"xref_id":"0021538"}}}


id: PBO:0085671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; likely involved directly in dityrosine layer assembly; putative GPI-anchored protein; overexpression causes growth arrest;; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; SHE10 has a paralog, OSW7/YFR039C, that arose from the whole genome duplication; paralogs are redundant for spore wall dityrosine assembly","termid":"PBO:0085671"}


id: FYPO:0001190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more enzymes that degrades cell wall polysaccharides. Cells stop growing (and may die) at a concentration of such enzymes that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001191"],"synonyms":[{"name":"hypersensitive to cell wall-degrading enzymes","type":"exact"},{"name":"sensitive to Lyticase","type":"narrow"},{"name":"sensitive to Novozyme 234","type":"narrow"},{"name":"sensitive to Zymolyase","type":"narrow"},{"name":"sensitive to beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"sensitive to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"sensitive to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"sensitive to lysing enzymes from Trichoderma harzianum","type":"narrow"}],"termid":"FYPO:0001190"}


id: PR:O36014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartyl aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02005","PANTHER:PTHR10761:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.02","secondary_identifiers":["UniProtKB:O36014"],"synonyms":[{"name":"Spom972h-DNPEP","type":"exact"}],"termid":"PR:O36014"}


id: MONDO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 108","secondary_identifiers":["MEDGEN:1627841","DOID:0080263","GARD:22658","OMIM:617654","UMLS:C4539997"],"synonyms":[{"name":"DFNB108","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 108","type":"narrow"},{"name":"deafness, autosomal recessive 108","type":"narrow"}],"termid":"MONDO:0033200","xrefs":{"Monarch":{"xref_id":"0033200"}}}


id: PR:O43043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element-binding protein cleavage-activating protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.15c","synonyms":[{"name":"SCAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SREBP cleavage-activating protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-scp1","type":"exact"}],"termid":"PR:O43043"}


id: MONDO:0015892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Growth hormone insensitivity syndrome (GHIS) is a group of diseases characterized by marked short stature associated with normal or elevated growth hormone (GH) concentrations, which fail to respond to exogenous GH administration. GHIS comprises growth delay due to IGF-1 deficiency, growth delay due to IGF-1 resistance, Laron syndrome, short stature due to STAT5b deficiency and primary acid-labile subunit (ALS) deficiency.","definition_xrefs":["Orphanet:181393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone insensitivity syndrome","secondary_identifiers":["GARD:3924","NCIT:C129867","MEDGEN:1384226","NANDO:2100114","NANDO:2200321","UMLS:C4318479"],"synonyms":[{"name":"GHIS","type":"exact"},{"name":"Growth hormone insensitivity syndromes","type":"exact"},{"name":"short stature due to a defect in growth hormone receptor or post-receptor pathway","type":"exact"}],"termid":"MONDO:0015892","xrefs":{"Monarch":{"xref_id":"0015892"}}}


id: PBO:0064815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 6","termid":"PBO:0064815"}


id: GO:0071047
data:
  {"annotated_genes":["SJAG_04084","SJAG_01191","SJAG_04153","SJAG_03179","SJAG_03745","SJAG_00854","SJAG_04824","SJAG_01818","SJAG_01521","SJAG_04321","SJAG_04006","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106786,116187,118603,93418,92586,97574,102402,96248,107772,104720,115747,105585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.","definition_xrefs":["GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"poly(A)-dependent mRNA catabolic process","type":"related"}],"termid":"GO:0071047","terms_by_termid":{"GO:0071042":null}}


id: FYPO:0000766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of N-ethylmaleimide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to N-ethylmaleimide","synonyms":[{"name":"resistance to N-ethylmaleimide during mitotic cell cycle","type":"related"},{"name":"resistance to N-ethylmaleimide during vegetative growth","type":"exact"},{"name":"resistant to N-ethylmaleimide","type":"exact"}],"termid":"FYPO:0000766"}


id: PBO:0091477
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3460318_3460319insC","termid":"PBO:0091477"}


id: MONDO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungal infections caused by trichosporon that may become systemic especially in an immunocompromised host. Clinical manifestations range from superficial cutaneous infections to systemic lesions in multiple organs.","definition_xrefs":["MESH:D060586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic systemic mycosis","termid":"MONDO:0045033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichosporonosis","secondary_identifiers":["UMLS:C0343939","DOID:0050290","MEDGEN:452453","SCTID:240761008"],"synonyms":[{"name":"Trichosporon caused disease or disorder","type":"exact"},{"name":"Trichosporon disease or disorder","type":"exact"},{"name":"Trichosporon infectious disease","type":"exact"}],"termid":"MONDO:0000306","xrefs":{"Monarch":{"xref_id":"0000306"}}}


id: GO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:22294686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"acyl-glucuronidase activity","synonyms":[{"name":"acyl-glucuronide deglucuronidation activity","type":"narrow"}],"termid":"GO:0036237"}


id: MONDO:0800042
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87606],"is_not":false,"summary":null,"term":"MONDO:0800042"}]},"cv_name":"mondo","definition":"A restrictive dermopathy that has material basis in homozygous or compound heterozygous mutation in the ZMPSTE24 gene on chromosome 1p34.","definition_xrefs":["DOID:0070369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"restrictive dermopathy","termid":"MONDO:0031213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536920","MEDGEN:1812447","UMLS:C5676878","SCTID:400128006","OMIM:275210"],"synonyms":[{"name":"fetal hypokinesia sequence due to restrictive dermopathy","type":"exact"},{"name":"foetal hypokinesia sequence due to restrictive dermopathy","type":"exact"},{"name":"hyperkeratosis-contracture syndrome","type":"exact"},{"name":"restrictive dermopathy","type":"broad"},{"name":"restrictive dermopathy 1, lethal","type":"exact"},{"name":"restrictive dermopathy, lethal","type":"related"},{"name":"tight skin contracture syndrome, lethal","type":"exact"}],"termid":"MONDO:0800042","terms_by_termid":{"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0800042"}}}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity (obsolete GO:2001056)","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: MONDO:0017755
data:
  {"annotated_genes":["SJAG_03785","SJAG_00938","SJAG_05213","SJAG_05194","SJAG_03363","SJAG_03011","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[87142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87327,87326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85659,85660,85661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[87265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"An instance of bilirubin metabolism disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of porphyrin metabolism","termid":"MONDO:0017754"},{"relation_name":"is_a","term_name":"bilirubin metabolism disease","termid":"MONDO:0024431"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_05194":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of bilirubin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1297666279","GARD:21347","Orphanet:309816","MEDGEN:1671515","UMLS:C0349427"],"synonyms":[{"name":"bilirubin metabolism disorder","type":"related"},{"name":"disorder of bilirubin metabolism","type":"broad"},{"name":"disorder of bilirubin metabolism and excretion","type":"exact"},{"name":"hereditary bilirubin metabolism disease","type":"exact"},{"name":"inborn disorder of bilirubin metabolism and excretion","type":"exact"}],"termid":"MONDO:0017755","terms_by_termid":{"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0017755"}}}


id: GO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chemokine receptor binding","synonyms":[{"name":"chemokine receptor ligand","type":"narrow"}],"termid":"GO:0042379"}


id: MONDO:0042983
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111","SJAG_00991","SJAG_05346","SJAG_03453","SJAG_00289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[87664,87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"},{"annotations":[87483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008612"},{"annotations":[86817,86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"A group of disorders characterized by ectodermal-based malformations and neoplastic growths in the skin, nervous system, and other organs.","definition_xrefs":["MESH:D020752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03453":null,"SJAG_04213":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"neurocutaneous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84348","SCTID:78572006","UMLS:C0265316","NANDO:2100220","MEDGEN:82706"],"synonyms":[{"name":"Phacomatoses","type":"related"},{"name":"Phacomatosis","type":"related"},{"name":"Phakomatoses","type":"related"},{"name":"neurocutaneous disorder","type":"related"},{"name":"neurocutaneous disorders","type":"related"},{"name":"neurocutaneous syndrome","type":"exact"},{"name":"neuroectodermal dysplasia","type":"related"},{"name":"neuroectodermal dysplasia syndrome","type":"related"},{"name":"neuroectodermal dysplasia syndromes","type":"related"},{"name":"phakomatosis","type":"related"},{"name":"syndrome, neurocutaneous","type":"related"},{"name":"syndrome, neuroectodermal dysplasia","type":"related"},{"name":"syndromes, neurocutaneous","type":"related"},{"name":"syndromes, neuroectodermal dysplasia","type":"related"}],"termid":"MONDO:0042983","terms_by_termid":{"MONDO:0008612":null,"MONDO:0009578":null,"MONDO:0013199":null,"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0042983"}}}


id: PBO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_subsequence","termid":"PBO:0034108"}


id: PR:Q9UTS8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: fex1/fex2.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0695 membrane protein C977.11/PB8B6.06c (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-fex2","type":"exact"}],"termid":"PR:Q9UTS8"}


id: FYPO:0006698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular 5-phosphoribosyl diphosphate level","synonyms":[{"name":"decreased 5-phosphoribosyl diphosphate accumulation","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"decreased cellular PRPP level","type":"exact"},{"name":"reduced cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0006698"}


id: MONDO:1010230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic encephalopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic encephalopathy, non-human animal","secondary_identifiers":["OMIA:000453"],"termid":"MONDO:1010230","xrefs":{"Monarch":{"xref_id":"1010230"}}}


id: GO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a plant axis (shoot axis or root) that originates from a lateral meristem.","definition_xrefs":["PO:0020145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral growth","termid":"GO:0080190"}


id: GO:2000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in cardiac right atrium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:2000161)","termid":"GO:2000161"}


id: PR:Q07538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PRP4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24056:SF17","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase prp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.14","secondary_identifiers":["UniProtKB:Q07538"],"synonyms":[{"name":"SPCC777.14","type":"related"},{"name":"Spom972h-PRPF4B","type":"exact"}],"termid":"PR:Q07538"}


id: MONDO:0008841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ataxia telangiectasia","termid":"MONDO:0008840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005047","MONDO:0005046"],"is_obsolete":false,"name":"ataxia-telangiectasia with generalized skin pigmentation and early death","secondary_identifiers":["MESH:C565930","UMLS:C1859615","GARD:15141","OMIM:208910","MEDGEN:395306"],"synonyms":[{"name":"ataxia-telangiectasia with generalized skin pigmentation and early death","type":"exact"}],"termid":"MONDO:0008841","xrefs":{"Monarch":{"xref_id":"0008841"}}}


id: MONDO:0002645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the cerebrum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebritis","secondary_identifiers":["DOID:3431","UMLS:C0742115","NCIT:C27199","MEDGEN:149273"],"synonyms":[{"name":"cerebral hemisphere inflammation","type":"exact"},{"name":"inflammation of cerebral hemisphere","type":"exact"}],"termid":"MONDO:0002645","xrefs":{"Monarch":{"xref_id":"0002645"}}}


id: PBO:0065608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 2","termid":"PBO:0065608"}


id: GO:2001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:16333108","PMID:18272357","PMID:17574915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"mycotoxin metabolic process","termid":"GO:0043385"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"gliotoxin metabolic process","synonyms":[{"name":"gliotoxin metabolism","type":"exact"}],"termid":"GO:2001308"}


id: MONDO:1012085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, cattle","secondary_identifiers":["OMIA:000393-9913"],"termid":"MONDO:1012085","xrefs":{"Monarch":{"xref_id":"1012085"}}}


id: PBO:0052249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 18","termid":"PBO:0052249"}


id: PBO:0052756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 48","termid":"PBO:0052756"}


id: GO:0061394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061394)","termid":"GO:0061394"}


id: MONDO:0012711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripapillary atrophy, beta type","secondary_identifiers":["MEDGEN:409689","OMIM:611650","MESH:C566898","UMLS:C1968838"],"synonyms":[{"name":"Beta-PPA","type":"related"},{"name":"PPAB","type":"related"},{"name":"peripapillary atrophy, BETA type","type":"related"},{"name":"peripapillary atrophy, beta type","type":"exact"},{"name":"peripapillary chorioretinal atrophy, Beta type","type":"related"}],"termid":"MONDO:0012711","xrefs":{"Monarch":{"xref_id":"0012711"}}}


id: MONDO:1010800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"brachydactyly, non-human animal","termid":"MONDO:1010156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, chicken","secondary_identifiers":["OMIA:000146-9031"],"termid":"MONDO:1010800","xrefs":{"Monarch":{"xref_id":"1010800"}}}


id: PBO:0045608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 19 (pseudogene)","termid":"PBO:0045608"}


id: GO:0102277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucosaminyl-(1->4)-N-acetyl-D-glucosamine + H2O = D-glucosamine + N-acetyl-D-glucosamine.","definition_xrefs":["RHEA:62164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"2-acetamido-4-O-(2-amino-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-D-glucose exo-beta-D-glucosaminidase activity","secondary_identifiers":["MetaCyc:RXN-12544"],"termid":"GO:0102277"}


id: MONDO:1010275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, non-human animal","secondary_identifiers":["OMIA:000243"],"termid":"MONDO:1010275","xrefs":{"Monarch":{"xref_id":"1010275"}}}


id: PBO:0047843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase","termid":"PBO:0047843"}


id: MONDO:1011314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of glycosylation that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of glycosylation, non-human animal","termid":"MONDO:1011314","xrefs":{"Monarch":{"xref_id":"1011314"}}}


id: GO:1900136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine activity","termid":"GO:1900136"}


id: PBO:0029606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transporter_activity_phenotype","termid":"PBO:0029606"}


id: PBO:0078614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64E, pseudogene","termid":"PBO:0078614"}


id: GO:0032365
data:
  {"annotated_genes":["SJAG_01329","SJAG_04413","SJAG_00261","SJAG_01437","SJAG_01116","SJAG_03690","SJAG_00355","SJAG_00176","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73251,73911,74632,117815,109930,73697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[72332,77310,62351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_01116":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_03690":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"intracellular lipid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032365","terms_by_termid":{"GO:0032366":null,"GO:0035621":null}}


id: GO:1990275
data:
  {"annotated_genes":["SJAG_04599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71409],"is_not":false,"summary":null,"term":"GO:1990275"}]},"cv_name":"molecular_function","definition":"Binding to a preribosome.","definition_xrefs":["PMID:22735702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"preribosome binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990275","terms_by_termid":{"GO:1990275":null}}


id: MONDO:0017576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conditions affecting individuals with 46,XX karyotype characterized by atypical development of one or more of the following: the gonads, the internal reproductive structures, the external reproductive/genital structures.","definition_xrefs":["NCIT:C127169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sexual differentiation","termid":"MONDO:0002145"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX disorder of sex development","secondary_identifiers":["UMLS:C2936403","GARD:18783","MEDGEN:424728","MESH:D058489","Orphanet:2982","SCTID:8800006"],"synonyms":[{"name":"46,XX DSD","type":"exact"},{"name":"46,XX differences of Sex development","type":"exact"},{"name":"46,XX disorders of Sex development","type":"exact"},{"name":"female pseudohermaphroditism","type":"exact"}],"termid":"MONDO:0017576","xrefs":{"Monarch":{"xref_id":"0017576"}}}


id: GO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cyclin-dependent protein kinase inhibitor p21WAF1/CIP1 bound to PCNA; formation of the complex inhibits DNA replication.","definition_xrefs":["PMID:7911228","GOC:mah","PMID:7915843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"PCNA-p21 complex","termid":"GO:0070557"}


id: PBO:0044143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 9","termid":"PBO:0044143"}


id: PBO:0069054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 300, pseudogene","termid":"PBO:0069054"}


id: PBO:0073611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 2","termid":"PBO:0073611"}


id: GO:0015280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium channel activity","termid":"GO:0005272"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ligand-gated sodium channel activity","secondary_identifiers":["Reactome:R-HSA-2672334"],"synonyms":[{"name":"acid-sensing ion channel activity","type":"narrow"},{"name":"epithelial sodium channel","type":"narrow"}],"termid":"GO:0015280"}


id: PBO:0036346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase Leu2","termid":"PBO:0036346"}


id: MONDO:1011816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoproliferative disease, non-human animal","secondary_identifiers":["OMIA:001409"],"termid":"MONDO:1011816","xrefs":{"Monarch":{"xref_id":"1011816"}}}


id: GO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somitogenesis","secondary_identifiers":["Reactome:R-HSA-9824272","Wikipedia:Somitogenesis"],"synonyms":[{"name":"formation of mesodermal clusters","type":"exact"}],"termid":"GO:0001756"}


id: GO:0102920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: octanoyl-CoA + isopenicillin N + H2O = H+ + coenzyme A + penicillin K + L-2-aminoadipate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl coenzyme A: isopenicillin N acyltransferase activity (obsolete GO:0102920)","termid":"GO:0102920"}


id: GO:0032345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aldosterone metabolic process","synonyms":[{"name":"down regulation of aldosterone metabolic process","type":"exact"},{"name":"down-regulation of aldosterone metabolic process","type":"exact"},{"name":"downregulation of aldosterone metabolic process","type":"exact"},{"name":"inhibition of aldosterone metabolic process","type":"narrow"},{"name":"negative regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032345"}


id: PR:Q10231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lanosterol synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00950","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.01c","secondary_identifiers":["UniProtKB:Q10231"],"synonyms":[{"name":"2,3-epoxysqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OSC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LSS","type":"exact"},{"name":"oxidosqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10231"}


id: GO:0071192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP1 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kv4.2-KChIP1 channel complex","secondary_identifiers":["CORUM:606"],"termid":"GO:0071192"}


id: MONDO:0014167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy, familial adult myoclonic in which the cause of the disease is a mutation in the CNTN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 5","secondary_identifiers":["GARD:18086","MEDGEN:815704","DOID:0111691","OMIM:615400","UMLS:C3809374"],"synonyms":[{"name":"CNTN2 epilepsy, familial adult myoclonic","type":"exact"},{"name":"FAME5","type":"related"},{"name":"cortical myoclonic tremor with epilepsy, familial, 5","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 5","type":"related"},{"name":"epilepsy, familial adult myoclonic caused by mutation in CNTN2","type":"exact"},{"name":"epilepsy, familial adult myoclonic, 5","type":"exact"},{"name":"epilepsy, familial adult myoclonic, type 5","type":"exact"},{"name":"epilepsy, myoclonic, familial adult, 5","type":"exact"}],"termid":"MONDO:0014167","xrefs":{"Monarch":{"xref_id":"0014167"}}}


id: MONDO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the dental pulp.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp disorder","secondary_identifiers":["ICD9:522.9","SCTID:57203004","NCIT:C34530","EFO:0009540","MESH:D003788","UMLS:C0011405","DOID:5330","MEDGEN:8305"],"synonyms":[{"name":"dental pulp disease","type":"exact"},{"name":"dental pulp disease or disorder","type":"exact"},{"name":"dental pulp disorder","type":"exact"},{"name":"disease of dental pulp","type":"exact"},{"name":"disease or disorder of dental pulp","type":"exact"},{"name":"disorder of dental pulp","type":"exact"},{"name":"disorder of pulp of tooth","type":"exact"},{"name":"pulp disorder","type":"exact"}],"termid":"MONDO:0003394","xrefs":{"Monarch":{"xref_id":"0003394"}}}


id: PBO:0083205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL026W/RNR2","termid":"PBO:0083205"}


id: PATO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers but not extraembryonic cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Pluripotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pluripotent","termid":"PATO:0001403"}


id: PBO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 15","termid":"PBO:0060068"}


id: MONDO:1011645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular arrhythmias and sudden death, non-human animal","secondary_identifiers":["OMIA:001040"],"termid":"MONDO:1011645","xrefs":{"Monarch":{"xref_id":"1011645"}}}


id: PBO:0061700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0061700"}


id: PBO:0079278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 2","termid":"PBO:0079278"}


id: FYPO:0008205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nucleus during hypoxia","termid":"FYPO:0008205"}


id: SO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that is disrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_transposon","synonyms":[{"name":"nested transposon","type":"exact"}],"termid":"SO:0001648"}


id: GO:0030983
data:
  {"annotated_genes":["SJAG_02261","SJAG_00634","SJAG_02748","SJAG_01807","SJAG_01620","SJAG_02187","SJAG_04410","SJAG_02226","SJAG_01419","SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58062,59132,64968,77235],"is_not":false,"summary":null,"term":"GO:0030983"},{"annotations":[73950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035485"},{"annotations":[116743,106400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032137"},{"annotations":[106401,100912,106271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000404"},{"annotations":[106402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032138"},{"annotations":[98506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032141"},{"annotations":[98507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing one or more mismatches.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02261":null,"SJAG_02748":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"mismatched DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0032134"],"synonyms":[{"name":"mispair binding","type":"exact"},{"name":"mispaired DNA binding","type":"exact"}],"termid":"GO:0030983","terms_by_termid":{"GO:0000404":null,"GO:0030983":null,"GO:0032137":null,"GO:0032138":null,"GO:0032141":null,"GO:0035485":null,"GO:0035487":null}}


id: GO:0010779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in meiotic gene conversion","termid":"GO:0010779"}


id: PBO:0027542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_intracellular_mitochondrion_distribution","termid":"PBO:0027542"}


id: MONDO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Bowman's membrane folds or rupture","secondary_identifiers":["UMLS:C0155115","MEDGEN:509796","ICD9:371.31","SCTID:45382000","DOID:11552"],"synonyms":[{"name":"Bowman membrane folds or rupture","type":"exact"},{"name":"folds and/or rupture of bowman's membrane","type":"exact"}],"termid":"MONDO:0001310","xrefs":{"Monarch":{"xref_id":"0001310"}}}


id: PBO:0091498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific kinetochore regulator (Meikin) Moa1","termid":"PBO:0091498"}


id: PR:O74750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-xylose and UDP-N-acetylglucosamine transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02706","PANTHER:PTHR10778:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transporter yea4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.09","secondary_identifiers":["UniProtKB:O74750"],"synonyms":[{"name":"Spom972h-SLC35B4","type":"exact"}],"termid":"PR:O74750"}


id: PBO:0056570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCPH1 antisense RNA 1","termid":"PBO:0056570"}


id: PBO:0004568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' DNA helicase, involved in DNA recombination and repair Pif1","termid":"PBO:0004568"}


id: PR:O43087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kms2 gene.","definition_xrefs":["UniProtKB:O43087","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy meiotic segregation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.12","synonyms":[{"name":"Spom972h-kms2","type":"exact"}],"termid":"PR:O43087"}


id: PBO:0059716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 24","termid":"PBO:0059716"}


id: GO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates an innate immune response. Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. Examples of this process include activation of the hypersensitive response of Arabidopsis thaliana and activation of any NOD or TLR signaling pathway in vertebrate species.","definition_xrefs":["GOC:add","GOC:mtg_sensu","PMID:15199967","PMID:16177805","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of innate immune response","secondary_identifiers":["GO:0002219"],"termid":"GO:0002218"}


id: PBO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF4 divergent transcript","termid":"PBO:0039010"}


id: PBO:0082169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent methyltransferase; involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants","termid":"PBO:0082169"}


id: MONDO:1012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, non-human animal","termid":"MONDO:1011688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, cattle","secondary_identifiers":["OMIA:000313-9913"],"termid":"MONDO:1012067","xrefs":{"Monarch":{"xref_id":"1012067"}}}


id: PBO:0066519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 4","termid":"PBO:0066519"}


id: GO:0031629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a synaptic vesicle with the presynaptic active zone membrane, thereby releasing its cargo neurotransmitters into the synaptic cleft.","definition_xrefs":["ISBN:0071120009","PMID:18618940","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"},{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"synaptic vesicle fusion","type":"broad"},{"name":"synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031629"}


id: GO:0090009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the primitive streak from unspecified parts. The primitive streak is a ridge of cells running along the midline of the embryo where the mesoderm ingresses. It defines the anterior-posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive streak formation","secondary_identifiers":["Reactome:R-HSA-9754189"],"termid":"GO:0090009"}


id: MONDO:0018467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephropathic infantile cystinosis is the most common and severe form of cystinosis, a metabolic disease characterized by an accumulation of cystine inside the lysosomes that causes damage in different organs and tissues, particularly in the kidneys and eyes.","definition_xrefs":["Orphanet:411629"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"nephropathic cystinosis","termid":"MONDO:0100151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002561","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"nephropathic infantile cystinosis","secondary_identifiers":["SCTID:62332007","ICD10EXP:E72.0+","GARD:9755","ICD10EXP:N16.3*","MEDGEN:760976","NANDO:1200162","NANDO:2201234","UMLS:C3537440"],"synonyms":[{"name":"CTNS","type":"related"},{"name":"cystinosin, defect of","type":"related"},{"name":"cystinosis, atypical nephropathic","type":"related"},{"name":"cystinosis, infantile nephropathic","type":"exact"},{"name":"lysosomal cystine transport protein, defect of","type":"related"},{"name":"nephropathic infantile cystinosis","type":"exact"}],"termid":"MONDO:0018467","xrefs":{"Monarch":{"xref_id":"0018467"}}}


id: PBO:0086814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR152C is not an essential gene","termid":"PBO:0086814"}


id: PATO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the molecular attraction exerted between two atoms or compounds.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affinity","termid":"PATO:0002070"}


id: PBO:0079756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocortin 2","termid":"PBO:0079756"}


id: MONDO:0016313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal cell carcinoma (obsolete MONDO:0016313)","termid":"MONDO:0016313","xrefs":{"Monarch":{"xref_id":"0016313"}}}


id: MONDO:0019487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare childhood-onset epilepsy characterized by sudden onset, short lasting absence associated with rhythmical myoclonia of head and shoulders.","definition_xrefs":["Orphanet:86911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"childhood-onset genetic generalized epilepsy syndrome","termid":"MONDO:0800498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy with myoclonic absences","secondary_identifiers":["NANDO:1200589","icd11.foundation:274380122","MEDGEN:140741","UMLS:C0393703","SCTID:230422001","GARD:19087"],"synonyms":[{"name":"EMA","type":"exact"}],"termid":"MONDO:0019487","xrefs":{"Monarch":{"xref_id":"0019487"}}}


id: PBO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemojuvelin BMP co-receptor","termid":"PBO:0050008"}


id: GO:0038018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a Wnt receptor. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:rl","GOC:signaling","PMID:19643732","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor catabolic process","termid":"GO:0032801"},{"relation_name":"part_of","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"Wnt receptor catabolic process","synonyms":[{"name":"Frizzled degradation","type":"narrow"},{"name":"Wnt receptor breakdown","type":"exact"},{"name":"Wnt receptor catabolism","type":"exact"},{"name":"Wnt receptor degradation","type":"related"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor degradation","type":"exact"}],"termid":"GO:0038018"}


id: GO:0035474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The segregation of angioblasts into discrete arterial and venous vessels from one common precursor vessel.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selective angioblast sprouting","termid":"GO:0035474"}


id: MONDO:0007678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein, renal (obsolete MONDO:0007678)","secondary_identifiers":["OMIM:138710"],"synonyms":[{"name":"glycoprotein, renal","type":"exact"}],"termid":"MONDO:0007678","xrefs":{"Monarch":{"xref_id":"0007678"}}}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: PBO:0002648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mo25 family protein Pmo25","termid":"PBO:0002648"}


id: PBO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0002829"}


id: MONDO:0008995
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86585],"is_not":false,"summary":null,"term":"MONDO:0008995"}]},"cv_name":"mondo","definition":"Yunis-Varon syndrome is a rare condition that affects many different parts of the body. Signs and symptoms are generally present from birth and may include underdeveloped or absent collarbones (clavicles); large fontanelles; characteristic facial features; hypotonia (reduced muscle tone) and/or abnormalities of the fingers and toes. Affected people may also experience feeding difficulties, breathing problems, brain malformations, heart defects, skeletal abnormalities, developmental delay, and/or intellectual disability. Yunis-Varon syndrome is caused by changes (mutations) in the FIG4 gene and isinherited in an autosomal recessive manner. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"is_obsolete":false,"name":"Yunis-Varon syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1696991249","MEDGEN:341818","GARD:331","NORD:1875","OMIM:216340","Orphanet:3472","MESH:C536719","UMLS:C1857663","DOID:0060589"],"synonyms":[{"name":"YVS","type":"related"},{"name":"Yunis Varon Syndrome","type":"exact"},{"name":"Yunis Varon syndrome","type":"exact"},{"name":"Yunis-Varon syndrome","type":"exact"},{"name":"Yunis-Varón syndrome","type":"exact"},{"name":"cleidocranial dysplasia with micrognathia, absent thumbs, and distal Aphalangia","type":"related"},{"name":"cleidocranial dysplasia with micrognathia, absent thumbs, and distal aphalangia","type":"exact"},{"name":"cleidocranial dysplasia-micrognathia-absent thumbs syndrome","type":"exact"}],"termid":"MONDO:0008995","terms_by_termid":{"MONDO:0008995":null},"xrefs":{"Monarch":{"xref_id":"0008995"}}}


id: GO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the site in the cell of an imaginal disc-derived wing at which a prehair initiates outgrowth. Restriction of prehair initiation to the distalmost part of a cell is essential to ensure that each wing epithelial cell produces one adult hair that points distally.","definition_xrefs":["GOC:mtg_transport","PMID:8947551","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"},{"relation_name":"part_of","term_name":"establishment of imaginal disc-derived wing hair orientation","termid":"GO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"imaginal disc-derived wing hair site selection","synonyms":[{"name":"prehair localization","type":"related"},{"name":"wing hair site selection","type":"exact"}],"termid":"GO:0035320"}


id: GO:0102361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: esculetin + UDP-alpha-D-glucose = 4-O-beta-D-glucosyl-esculetin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete esculetin 4-O-beta-glucosyltransferase activity (obsolete GO:0102361)","termid":"GO:0102361"}


id: PR:O94264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P8B7.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.15c","synonyms":[{"name":"Spom972h-mpe1","type":"exact"}],"termid":"PR:O94264"}


id: PBO:0071117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 119","termid":"PBO:0071117"}


id: PBO:0063360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer expressed EZH2 associated transcript","termid":"PBO:0063360"}


id: MONDO:0009644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency","termid":"MONDO:0020480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","secondary_identifiers":["Orphanet:308393","MEDGEN:340760","UMLS:C1854989","GARD:17387","OMIM:252160","PMID:10053004","DOID:0111163","MESH:C565373"],"synonyms":[{"name":"MOCOD type B","type":"exact"},{"name":"MOCODB","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase and aldehyde oxidase type B","type":"exact"},{"name":"molybdenum cofactor deficiency B","type":"exact"},{"name":"molybdenum cofactor deficiency complementation group B","type":"exact"},{"name":"molybdenum cofactor deficiency type B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group type B","type":"exact"},{"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","type":"exact"}],"termid":"MONDO:0009644","xrefs":{"Monarch":{"xref_id":"0009644"}}}


id: GO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic ribosomal RNA (obsolete GO:0005567)","synonyms":[{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"GO:0005567"}


id: PBO:0053238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL3 antisense RNA 1","termid":"PBO:0053238"}


id: PBO:0086737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086737"}


id: GO:1902367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Notch signaling pathway involved in somitogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:21795391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Notch signaling pathway","termid":"GO:0045746"},{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway involved in somitogenesis","termid":"GO:1902366"},{"relation_name":"negatively_regulates","term_name":"Notch signaling pathway involved in somitogenesis","termid":"GO:1902359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"down regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"inhibition of N signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of N signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of N signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of N signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch receptor signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch receptor signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch-receptor signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch-receptor signalling pathway involved in somitogenesis","type":"narrow"},{"name":"negative regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902367"}


id: GO:1904282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of antigen processing and presentation of endogenous peptide antigen via MHC class I.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:TermGenie","PMID:24643698","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"regulates","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","synonyms":[{"name":"regulation of antigen presentation, endogenous peptide antigen","type":"broad"},{"name":"regulation of antigen processing, endogenous antigen via MHC class I","type":"broad"},{"name":"regulation of antigen processing, endogenous antigen via major histocompatibility complex class I","type":"broad"},{"name":"regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:1904282"}


id: GO:0047384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [hydroxymethylglutaryl-CoA reductase (NADPH)] phosphate = phosphate + [hydroxymethylglutaryl-CoA reductase (NADPH)].","definition_xrefs":["EC:3.1.3.47","MetaCyc:3.1.3.47-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0004721","GO:0016787","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)]-phosphatase activity","synonyms":[{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphatase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphate phosphohydrolase activity","type":"related"},{"name":"reductase phosphatase activity","type":"broad"}],"termid":"GO:0047384"}


id: GO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulated cleavage of the developing macronuclear genome at a limited number of chromosome breakage sites (CBS). The macronuclear destined segment (MDS) sequence adjacent to the CBS (or separated from it by a BES) receives a macronuclear telomere following chromosome breakage.","definition_xrefs":["PMID:25303953","GOC:ns","PMID:32165395","PMID:15956677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed DNA elimination","termid":"GO:0031049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"programmed DNA elimination by chromosome breakage","synonyms":[{"name":"chromosome breakage","type":"related"}],"termid":"GO:0031052"}


id: PBO:0030802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030802"}


id: GO:0046399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucuronate, the anion of glucuronic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate biosynthetic process","synonyms":[{"name":"glucuronate anabolism","type":"exact"},{"name":"glucuronate biosynthesis","type":"exact"},{"name":"glucuronate formation","type":"exact"},{"name":"glucuronate synthesis","type":"exact"}],"termid":"GO:0046399"}


id: PBO:0074094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 9","termid":"PBO:0074094"}


id: MONDO:0024622
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87652,86210,87653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"An adenocarcinoma arising from the follicular cells of the thyroid gland. According to the degree of differentiation, it is classified either as differentiated carcinoma (extensive evidence of follicular cell differentiation), or poorly differentiated carcinoma (limited evidence of follicular cell differentiation).","definition_xrefs":["NCIT:C27380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland adenocarcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:309935","UMLS:C1704228","DOID:0080524"],"synonyms":[{"name":"thyroid adenocarcinoma","type":"exact"},{"name":"thyroid gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0024622","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0024622"}}}


id: FYPO:0008144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount heme O measured in a cell is too low to detect.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme absent from cell","termid":"FYPO:0008142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"heme O absent from cell","termid":"FYPO:0008144"}


id: MONDO:0020742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome (obsolete MONDO:0020742)","secondary_identifiers":["Orphanet:1317","OMIM:212540","MESH:C537965"],"synonyms":[{"name":"CAMAK syndrome","type":"related"},{"name":"CAMFAK syndrome","type":"related"},{"name":"cataract, microcephaly, arthrogryposis, kyphosis syndrome","type":"related"},{"name":"cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome","type":"related"},{"name":"cataract-microcephaly-failure to thrive-kyphoscoliosis","type":"related"}],"termid":"MONDO:0020742","xrefs":{"Monarch":{"xref_id":"0020742"}}}


id: FYPO:0007969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, extend beyond the spindle pole body and are present transiently. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:26031557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000120","FYPO:0002403"],"is_obsolete":false,"name":"short-lived long mitotic spindle microtubules protruding beyond spindle pole body","secondary_identifiers":["PomBase:mlr"],"termid":"FYPO:0007969"}


id: GO:0009218
data:
  {"annotated_genes":["SJAG_00444","SJAG_04709","SJAG_03676","SJAG_00533","SJAG_00885","SJAG_03164","SJAG_05024","SJAG_00694","SJAG_04665","SJAG_04354","SJAG_02887","SJAG_03708","SJAG_04713","SJAG_00964","SJAG_00779","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[57234,59503,59169,61239,61995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[80764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[92775,107573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[68208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[64618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[68210,93310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[80767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[76827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"},{"annotations":[88792,87808,68209,92309,93311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[64617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04665":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleotide metabolism","type":"exact"}],"termid":"GO:0009218","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0006256":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046704":null,"GO:0046705":null}}


id: PR:Q9C0U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0U7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vps5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.01","synonyms":[{"name":"Spom972h-vps5","type":"exact"}],"termid":"PR:Q9C0U7"}


id: MONDO:0003453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pre-malignant neoplasm","termid":"MONDO:0000611"},{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"squamous cell intraepithelial neoplasia","termid":"MONDO:0024475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival intraepithelial neoplasm","secondary_identifiers":["NCIT:C6120","ICD9:239.89","DOID:5465","SCTID:418134006","UMLS:C1333148","MEDGEN:234172"],"synonyms":[{"name":"conjunctiva intraepithelial neoplasia","type":"exact"},{"name":"conjunctival intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of conjunctiva","type":"exact"},{"name":"intraepithelial neoplasia of the conjunctiva","type":"exact"}],"termid":"MONDO:0003453","xrefs":{"Monarch":{"xref_id":"0003453"}}}


id: GO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-4 production","termid":"GO:0032673"},{"relation_name":"positively_regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4 production","secondary_identifiers":["GO:0045404","GO:0150135"],"synonyms":[{"name":"activation of interleukin-4 production","type":"narrow"},{"name":"positive regulation of IL-4 production","type":"exact"},{"name":"positive regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-4 secretion","type":"narrow"},{"name":"stimulation of interleukin-4 production","type":"narrow"},{"name":"up regulation of interleukin-4 production","type":"exact"},{"name":"up-regulation of interleukin-4 production","type":"exact"},{"name":"upregulation of interleukin-4 production","type":"exact"}],"termid":"GO:0032753"}


id: PBO:0043418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine dipeptidase 1","termid":"PBO:0043418"}


id: FYPO:0002902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during vegetative growth","synonyms":[{"name":"decreased protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"decreased protein localization to kinetochore during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to kinetochore during vegetative growth","type":"exact"}],"termid":"FYPO:0002902"}


id: GO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate filament polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization","termid":"GO:0030839"},{"relation_name":"is_a","term_name":"positive regulation of protein polymerization","termid":"GO:0032273"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"positively_regulates","term_name":"intermediate filament polymerization","termid":"GO:0045107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0065003"],"is_obsolete":false,"name":"positive regulation of intermediate filament polymerization","synonyms":[{"name":"activation of intermediate filament polymerization","type":"narrow"},{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of intermediate filament polymerization","type":"narrow"},{"name":"up regulation of intermediate filament polymerization","type":"exact"},{"name":"up-regulation of intermediate filament polymerization","type":"exact"},{"name":"upregulation of intermediate filament polymerization","type":"exact"}],"termid":"GO:0030841"}


id: MONDO:0014765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any wooly hair in which the cause of the disease is a mutation in the KRT25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wooly hair, autosomal recessive 3","secondary_identifiers":["MEDGEN:902275","OMIM:616760","UMLS:C4225214","DOID:0111574","GARD:16157"],"synonyms":[{"name":"ARWH3","type":"exact"},{"name":"KRT25 woolly hair (disease)","type":"exact"},{"name":"KRT25 wooly hair (disease)","type":"exact"},{"name":"woolly hair (disease) caused by mutation in KRT25","type":"exact"},{"name":"woolly hair, autosomal recessive 3, with hypotrichosis","type":"related"},{"name":"woolly hair, autosomal recessive type 3","type":"exact"},{"name":"wooly hair (disease) caused by mutation in KRT25","type":"exact"},{"name":"wooly hair, autosomal recessive 3","type":"exact"},{"name":"wooly hair, autosomal recessive 3, with hypotrichosis","type":"related"},{"name":"wooly hair, autosomal recessive type 3","type":"exact"}],"termid":"MONDO:0014765","xrefs":{"Monarch":{"xref_id":"0014765"}}}


id: GO:0051543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"elastin biosynthetic process","termid":"GO:0051542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of elastin biosynthetic process","termid":"GO:0051543"}


id: PBO:0005378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, DUF2457 family","termid":"PBO:0005378"}


id: PATO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to harmonious coexistence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compatibility","termid":"PATO:0000021"}


id: GO:0043977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K5 acetylation (obsolete GO:0043977)","synonyms":[{"name":"histone H2A acetylation at K5","type":"exact"}],"termid":"GO:0043977"}


id: MONDO:0035002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated inherited retinal disorder (obsolete MONDO:0035002)","secondary_identifiers":["Orphanet:520817"],"termid":"MONDO:0035002","xrefs":{"Monarch":{"xref_id":"0035002"}}}


id: MONDO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that involves the integument and its appendages, including hair and nails. Infection may involve the stratum corneum or deeper layers of the epidermis.","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous mycosis","secondary_identifiers":["DOID:0050134","SCTID:14560005"],"termid":"MONDO:0000254","xrefs":{"Monarch":{"xref_id":"0000254"}}}


id: MONDO:1030001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to","secondary_identifiers":["OMIMPS:607631"],"termid":"MONDO:1030001","xrefs":{"Monarch":{"xref_id":"1030001"}}}


id: GO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["GOC:add","PMID:14665680","PMID:16020688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid metabolic process","synonyms":[{"name":"WTA metabolic process","type":"exact"},{"name":"wall teichoic acid metabolism","type":"exact"}],"termid":"GO:0070397"}


id: PBO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor interacting protein 1","termid":"PBO:0043485"}


id: GO:0036151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylcholine, through sequential deacylation and re-acylation reactions, to generate phosphatidylcholine containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:18195019","PMID:18458083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine acyl-chain remodeling","secondary_identifiers":["Reactome:R-HSA-1482788"],"synonyms":[{"name":"phosphatidylcholine acyl-chain remodelling","type":"exact"}],"termid":"GO:0036151"}


id: PBO:0084021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylphosphatidylinositol-dependent cell wall protein; expression is periodic and decreases in respone to ergosterol perturbation or upon entry into stationary phase; depletion increases resistance to lactic acid","termid":"PBO:0084021"}


id: MONDO:0018355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi-like syndrome","termid":"MONDO:0018354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"SIM1-related Prader-Willi-like syndrome","secondary_identifiers":["UMLS:C5680040","MEDGEN:1802084","Orphanet:398079","GARD:21642"],"synonyms":[{"name":"PWS-like due to a point mutation","type":"related"},{"name":"PWS-like due to point mutation","type":"related"},{"name":"Prader-Willi-like syndrome due to a point mutation","type":"related"},{"name":"SIM1-related PWLS","type":"exact"}],"termid":"MONDO:0018355","xrefs":{"Monarch":{"xref_id":"0018355"}}}


id: MONDO:0010681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelolymphatic insufficiency","secondary_identifiers":["MEDGEN:333371","OMIM:310350","UMLS:C1839650"],"synonyms":[{"name":"Myelolymphatic insufficiency","type":"exact"},{"name":"Pelger-like anomaly with leukopenia and susceptibility to infections","type":"related"}],"termid":"MONDO:0010681","xrefs":{"Monarch":{"xref_id":"0010681"}}}


id: GO:0005725
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the regions of heterochromatin that form a reproducible set of dense bands scattered along the euchromatic arms in polytene chromosomes.","definition_xrefs":["PMID:14579245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"intercalary heterochromatin","termid":"GO:0005725"}


id: MOD:01685
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino group with a alpha-palmitoylamino group.","definition_xrefs":["Unimod:47#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"alpha-amino palmitoylated residue","synonyms":[{"name":"N2PamRes","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"}],"termid":"MOD:01685"}


id: MONDO:0014543
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85766],"is_not":false,"summary":null,"term":"MONDO:0014543"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndromes with glycosylation defect in which the cause of the disease is a mutation in the ALG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome with tubular aggregates","termid":"MONDO:0000182"},{"relation_name":"is_a","term_name":"ALG2-congenital disorder of glycosylation","termid":"MONDO:0011933"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital myasthenic syndrome 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015597","DOID:0110669","OMIM:616228","MEDGEN:864034","GARD:18454"],"synonyms":[{"name":"ALG2 congenital myasthenic syndromes with glycosylation defect","type":"exact"},{"name":"CMS14","type":"exact"},{"name":"CMSTA3","type":"exact"},{"name":"congenital myasthenic syndrome 14","type":"exact"},{"name":"congenital myasthenic syndrome 14, with tubular aggregates","type":"exact"},{"name":"congenital myasthenic syndrome type 14","type":"exact"},{"name":"congenital myasthenic syndrome with tubular aggregates 3","type":"exact"},{"name":"congenital myasthenic syndromes with glycosylation defect caused by mutation in ALG2","type":"exact"},{"name":"myasthenic syndrome, congenital, 14","type":"related"},{"name":"myasthenic syndrome, congenital, 14, with tubular aggregates","type":"exact"},{"name":"myasthenic syndrome, congenital, type 14","type":"exact"},{"name":"myasthenic syndrome, congenital, with tubular aggregates 3","type":"related"}],"termid":"MONDO:0014543","terms_by_termid":{"MONDO:0014543":null},"xrefs":{"Monarch":{"xref_id":"0014543"}}}


id: PBO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaryl-CoA dehydrogenase","termid":"PBO:0048457"}


id: MONDO:0009857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent Mullerian duct syndrome (PMDS) is a rare disorder of sex development (DSD) characterized by the persistence of Müllerian derivatives, the uterus and/or fallopian tubes, in otherwise normally virilized boys.","definition_xrefs":["Orphanet:2856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphroditism","termid":"MONDO:0005518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent Mullerian duct syndrome","secondary_identifiers":["ICD9:752.89","NCIT:C120188","OMIM:261550","MEDGEN:342367","SCTID:702358005","MESH:C536665","UMLS:C1849930","GARD:8435","DOID:0050791","icd11.foundation:697796373"],"synonyms":[{"name":"PMDS","type":"exact"},{"name":"female genital ducts in otherwise normal Male","type":"related"},{"name":"female genital ducts in otherwise normal male","type":"related"},{"name":"hernia uteri inguinale","type":"related"},{"name":"persistent MULLERIAN duct syndrome, types I and II","type":"related"},{"name":"persistent Muellerian duct syndrome","type":"exact"},{"name":"persistent Mullerian derivatives","type":"exact"},{"name":"persistent Mullerian duct syndrome","type":"exact"},{"name":"persistent Müllerian derivatives","type":"exact"},{"name":"persistent Müllerian duct syndrome","type":"related"},{"name":"persistent mullerian duct syndrome, type I","type":"exact"},{"name":"persistent mullerian duct syndrome, type II","type":"exact"},{"name":"persistent mullerian duct syndrome, types 1 and 2","type":"related"},{"name":"persistent oviduct syndrome","type":"related"},{"name":"pseudohermaphroditism, Male internal","type":"related"}],"termid":"MONDO:0009857","xrefs":{"Monarch":{"xref_id":"0009857"}}}


id: PBO:0117108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOBTB2 antisense RNA 1","termid":"PBO:0117108"}


id: PBO:0117012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNB2 antisense RNA 1","termid":"PBO:0117012"}


id: PR:P35551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA 2'-O-methyltransferase fibrillarin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03507","PANTHER:PTHR10335:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.10c","secondary_identifiers":["UniProtKB:P35551"],"synonyms":[{"name":"Spom972h-FBL","type":"exact"},{"name":"histone-glutamine methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P35551"}


id: PBO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin","termid":"PBO:0048573"}


id: PBO:0004750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (predicted)","termid":"PBO:0004750"}


id: PBO:0114358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane phosphate (Pi) transmembrane transporter Plt1","termid":"PBO:0114358"}


id: PBO:0075819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 3","termid":"PBO:0075819"}


id: FYPO:0008254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal in regions containing protein-coding genes.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation at protein coding gene during vegetative growth","termid":"FYPO:0008254"}


id: GO:0016623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["EC:1.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}


id: GO:0009278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A peptidoglycan polymer that forms the shape-determining structure of the cell all of Gram-negative bacteria.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete murein sacculus (obsolete GO:0009278)","synonyms":[{"name":"murein sacculus","type":"exact"}],"termid":"GO:0009278"}


id: PBO:0049638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 41","termid":"PBO:0049638"}


id: MONDO:0859575
data:
  {"annotated_genes":["SJAG_00213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85968],"is_not":false,"summary":null,"term":"MONDO:0859575"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"},{"relation_name":"is_a","term_name":"Atelis syndrome","termid":"MONDO:0859393"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00213":null},"genotype_count":0,"is_obsolete":false,"name":"Atelis syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824054","OMIM:620184","UMLS:C5774281"],"termid":"MONDO:0859575","terms_by_termid":{"MONDO:0859575":null},"xrefs":{"Monarch":{"xref_id":"0859575"}}}


id: FYPO:0006088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to DNA damage. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA binding during cellular response to DNA damage","synonyms":[{"name":"normal DNA binding in response to DNA damage","type":"related"}],"termid":"FYPO:0006088"}


id: MONDO:1011054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, domestic cat","secondary_identifiers":["OMIA:000807-9685"],"termid":"MONDO:1011054","xrefs":{"Monarch":{"xref_id":"1011054"}}}


id: GO:0043225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + inorganic anion(out) = ADP + phosphate + inorganic anion(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled inorganic anion transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5690340","Reactome:R-HSA-1454916"],"synonyms":[{"name":"ATP-dependent anion transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled anion transmembrane transporter activity","type":"exact"},{"name":"anion ABC transporter","type":"narrow"},{"name":"anion transmembrane-transporting ATPase activity","type":"related"},{"name":"anion-transporting ATPase activity","type":"exact"}],"termid":"GO:0043225"}


id: PBO:0091300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091300"}


id: MONDO:0970944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome, mitochondrial","secondary_identifiers":["OMIM:500017"],"termid":"MONDO:0970944","xrefs":{"Monarch":{"xref_id":"0970944"}}}


id: PBO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family protein, involved in iron-sulphur cluster assembly (predicted)","termid":"PBO:0003442"}


id: MONDO:0100164
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86766,86767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"}]},"cv_name":"mondo","definition":"Permanent neonatal diabetes mellitus (PNDM) is a monogenic form of neonatal diabetes (NDM) characterized by persistent hyperglycemia within the first 12 months of life in general, requiring continuous insulin treatment.","definition_xrefs":["Orphanet:99885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal diabetes mellitus","termid":"MONDO:0016391"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254","MONDO:0037792","MONDO:0004335","MONDO:0005015"],"is_obsolete":false,"name":"permanent neonatal diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:609565001","UMLS:C1833104","GARD:10457","DOID:0060639","OMIMPS:606176","NCIT:C114902","icd11.foundation:33655955","MEDGEN:371484","MESH:C563425"],"synonyms":[{"name":"PDMI","type":"exact"},{"name":"PNDM","type":"exact"},{"name":"developmental delay, epilepsy, and neonatal diabetes","type":"related"},{"name":"diabetes mellitus, permanent neonatal","type":"related"},{"name":"diabetes mellitus, permanent neonatal, with neurologic features","type":"related"},{"name":"diabetes mellitus, permanent, of infancy","type":"related"},{"name":"monogenic diabetes of infancy","type":"exact"},{"name":"permanent diabetes mellitus of infancy","type":"exact"}],"termid":"MONDO:0100164","terms_by_termid":{"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0100164"}}}


id: GO:0030585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + oxaloacetate = CO2 + phosphate + phosphoenolpyruvate.","definition_xrefs":["RHEA:22356","EC:4.1.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase (diphosphate) activity","secondary_identifiers":["KEGG_REACTION:R00346","MetaCyc:4.1.1.38-RXN"],"synonyms":[{"name":"PEP carboxyphosphotransferase activity","type":"related"},{"name":"PEPCTrP","type":"related"},{"name":"diphosphate:oxaloacetate carboxy-lyase (transphosphorylating)","type":"related"},{"name":"diphosphate:oxaloacetate carboxy-lyase (transphosphorylating; phosphoenolpyruvate-forming)","type":"related"},{"name":"phosphoenolpyruvate carboxykinase (pyrophosphate) activity","type":"related"},{"name":"phosphoenolpyruvate carboxylase (pyrophosphate)","type":"related"},{"name":"phosphoenolpyruvate carboxyphosphotransferase activity","type":"related"},{"name":"phosphoenolpyruvate carboxytransphosphorylase activity","type":"related"},{"name":"phosphoenolpyruvic carboxykinase","type":"broad"},{"name":"phosphoenolpyruvic carboxykinase (pyrophosphate)","type":"related"},{"name":"phosphoenolpyruvic carboxylase (pyrophosphate)","type":"related"},{"name":"phosphoenolpyruvic carboxytransphosphorylase activity","type":"related"},{"name":"phosphopyruvate carboxykinase","type":"broad"},{"name":"phosphopyruvate carboxykinase (pyrophosphate)","type":"related"},{"name":"phosphopyruvate carboxylase (pyrophosphate)","type":"related"}],"termid":"GO:0030585"}


id: GO:0141031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by actin crosslinking the host actin filaments. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:14512630","PMID:22814176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin crosslinking","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin crosslinking","type":"exact"}],"termid":"GO:0141031"}


id: PBO:0055927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A15, pseudogene","termid":"PBO:0055927"}


id: PBO:0117141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEPSIN antisense RNA 1","termid":"PBO:0117141"}


id: GO:0103086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(5'-methylthio)pentylmalate = 3-(5'-methylthio)pentylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiopentylmalate isomerase activity (obsolete GO:0103086)","termid":"GO:0103086"}


id: MONDO:0004084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveal epithelioid cell melanoma (obsolete MONDO:0004084)","termid":"MONDO:0004084","xrefs":{"Monarch":{"xref_id":"0004084"}}}


id: SO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that mediates binding to PCNA. The consensus sequence is QXX(hh)XX(aa), where (h) denotes residues with moderately hydrophobic side chains and (a) denotes residues with highly hydrophobic aromatic side chains.","definition_xrefs":["PMID:9631646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_protein_contact","termid":"SO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"PIP_box","synonyms":[{"name":"PIP box","type":"exact"}],"termid":"SO:0001810"}


id: GO:0099137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric, non-reproductive fruiting body in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric, non-reproductive fruiting body development","synonyms":[{"name":"fully co-operative, chimeric, non-reproductive fruiting body development","type":"exact"}],"termid":"GO:0099137"}


id: GO:0050419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxymandelonitrile = 4-hydroxybenzaldehyde + hydrocyanate.","definition_xrefs":["RHEA:15977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymandelonitrile lyase activity","secondary_identifiers":["EC:4.1.2.11","MetaCyc:HYDROXYMANDELONITRILE-LYASE-RXN"],"synonyms":[{"name":"(S)-4-hydroxymandelonitrile 4-hydroxybenzaldehyde-lyase (cyanide-forming)","type":"related"},{"name":"(S)-4-hydroxymandelonitrile hydroxybenzaldehyde-lyase activity","type":"related"},{"name":"hydroxynitrile lyase activity","type":"broad"},{"name":"sorghum hydroxynitrile lyase activity","type":"related"}],"termid":"GO:0050419"}


id: MONDO:0021291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the fundus of stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric fundus carcinoma","termid":"MONDO:0003970"},{"relation_name":"is_a","term_name":"stomach carcinoma in situ","termid":"MONDO:0004716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of fundus of stomach","secondary_identifiers":["MEDGEN:91053","SCTID:92598002","NCIT:C4429","UMLS:C0345800"],"synonyms":[{"name":"carcinoma in situ of fundus of stomach","type":"exact"},{"name":"carcinoma in situ of gastric fundus","type":"exact"},{"name":"carcinoma in situ of the fundus of the stomach","type":"exact"},{"name":"carcinoma in situ of the gastric fundus","type":"exact"},{"name":"fundus of stomach carcinoma in situ","type":"exact"},{"name":"fundus of stomach in situ carcinoma","type":"exact"},{"name":"gastric fundus carcinoma in situ","type":"exact"},{"name":"gastric fundus carcinoma in situ aJCC v6 and v7","type":"exact"},{"name":"stage 0 fundus of stomach carcinoma","type":"exact"},{"name":"stage 0 gastric fundus carcinoma","type":"exact"}],"termid":"MONDO:0021291","xrefs":{"Monarch":{"xref_id":"0021291"}}}


id: PBO:0030299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle","termid":"PBO:0030299"}


id: PBO:0003333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 7 (predicted)","termid":"PBO:0003333"}


id: PBO:0081893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 844","termid":"PBO:0081893"}


id: PBO:0029688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_vegetative_growth","termid":"PBO:0029688"}


id: MONDO:0054817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 17","secondary_identifiers":["DOID:0070404","UMLS:C4693912","MEDGEN:1644557","OMIM:618006"],"synonyms":[{"name":"HLD17","type":"related"},{"name":"leukodystrophy, hypomyelinating, 17","type":"exact"}],"termid":"MONDO:0054817","xrefs":{"Monarch":{"xref_id":"0054817"}}}


id: PBO:0030146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_caffeine","termid":"PBO:0030146"}


id: MONDO:0011073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient neonatal diabetes mellitus","termid":"MONDO:0020525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, transient neonatal, 1","secondary_identifiers":["SCTID:609579009","UMLS:C1832386","OMIM:601410","MESH:C563322","MEDGEN:371317","Orphanet:99886","GARD:1839"],"synonyms":[{"name":"Dmtn","type":"related"},{"name":"Tndm","type":"related"},{"name":"Tndm1","type":"related"},{"name":"diabetes mellitus, transient neonatal 1","type":"exact"},{"name":"diabetes mellitus, transient neonatal, 1","type":"exact"},{"name":"diabetes mellitus, transient neonatal, type 1","type":"exact"}],"termid":"MONDO:0011073","xrefs":{"Monarch":{"xref_id":"0011073"}}}


id: MONDO:0032906
data:
  {"annotated_genes":["SJAG_04628"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87052],"is_not":false,"summary":null,"term":"MONDO:0032906"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is an autosomal recessive mutation in the PCYT2 gene.","definition_xrefs":["PMID:31637422","MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 82, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112343","OMIM:618770","MEDGEN:1710411","UMLS:C5394037","Orphanet:631073"],"synonyms":[{"name":"SPG82","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 82","type":"exact"},{"name":"spastic paraplegia 82, autosomal recessive","type":"exact"}],"termid":"MONDO:0032906","terms_by_termid":{"MONDO:0032906":null},"xrefs":{"Monarch":{"xref_id":"0032906"}}}


id: PBO:0065271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 33","termid":"PBO:0065271"}


id: MOD:00496
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 125 is merged with entry 199, remap to id: MOD:00552","definition_xrefs":["Unimod:125"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00496 reductive amination-D (obsolete MOD:00496)","termid":"MOD:00496"}


id: PBO:0080374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog A","termid":"PBO:0080374"}


id: GO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-based cuticle development (obsolete GO:0007592)","synonyms":[{"name":"protein-based cuticle anabolism","type":"exact"},{"name":"protein-based cuticle biosynthetic process","type":"exact"},{"name":"protein-based cuticle development","type":"exact"},{"name":"protein-based cuticle formation","type":"exact"},{"name":"protein-based cuticle synthesis","type":"exact"}],"termid":"GO:0007592"}


id: PBO:0073157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit beta","termid":"PBO:0073157"}


id: PBO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M transition checkpoint protein Sum2","termid":"PBO:0003113"}


id: PBO:0110331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 7","termid":"PBO:0110331"}


id: FYPO:0003101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly occurs to a lower extent than normal in regions containing protein-coding genes. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","PMID:24095277","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased heterochromatin assembly at protein coding gene","synonyms":[{"name":"decreased heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at protein-coding gene","type":"exact"},{"name":"decreased heterochromatin formation at protein coding gene","type":"exact"},{"name":"reduced heterochromatin assembly at protein coding gene","type":"exact"}],"termid":"FYPO:0003101"}


id: PBO:0069053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 299, pseudogene","termid":"PBO:0069053"}


id: MONDO:0100521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by pathogenic variants of the NOG gene, encoding the noggin protein. Five overlapping clinical syndromes associated with NOG mutations have been described; proximal symphalangism, multiple synostoses syndrome 1, tarsal-carpal coalition syndrome, stapes ankylosis with broad thumbs and toes, and brachydactyly type B2. NOG-related symphalangism spectrum disorder is a new term initially proposed by Potti et al., 2011 to encompass these disorders. NOG-SSD is characterized by proximal symphalangism, conductive deafness caused by stapes ankylosis, ocular abnormality such as hyperopia and strabismus, and characteristic facial features including a broad, tubular-shaped nose and a thin upper vermilion.","definition_xrefs":["PMID:21538686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"NOG-related symphalangism spectrum disorder","synonyms":[{"name":"NOG-SSD","type":"exact"}],"termid":"MONDO:0100521","xrefs":{"Monarch":{"xref_id":"0100521"}}}


id: PBO:0087505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of G protein involved in pheromone response; GTP-binding alpha subunit of heterotrimeric G protein; negatively regulates mating pathway by sequestering G(beta)gamma and triggering an adaptive response; activates Vps34p at endosome; protein abundance increases in response to DNA replication stress; mutations in human homolog GNAS associated with McCune-Albright syndrome","termid":"PBO:0087505"}


id: FYPO:0007698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is absent.","definition_xrefs":["PMID:33493431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA strand exchange inhibitor activity","synonyms":[{"name":"DNA strand exchange inhibitor activity abolished","type":"exact"},{"name":"abolished RecA-family recombinase inhibitor activity","type":"exact"},{"name":"abolished negative regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007698"}


id: PBO:0086425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative helicase with limited sequence similarity to human Rb protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YLR419W is not an essential gene","termid":"PBO:0086425"}


id: GO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a mineralocorticoid and transmitting the signal to the transcriptional machinery by binding to a specific DNA sequence in order to modulate transcription by RNA polymerase II.","definition_xrefs":["GOC:signaling","PMID:20932876"],"gene_count":0,"genotype_count":0,"name":"obsolete mineralocorticoid receptor activity (obsolete GO:0017082)","synonyms":[{"name":"aldosterone receptor","type":"narrow"}],"termid":"GO:0017082"}


id: GO:0030439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030439)","synonyms":[{"name":"activation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030439"}


id: GO:1904240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["PMID:17000876","GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"negatively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904240"}


id: MONDO:0020546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome of immunologically mediated tissue damage that may occur following an allogeneic transplant, usually affecting the skin, liver, and GI tract. The onset is usually within one hundred days of transplantation or immunologic manipulation.","definition_xrefs":["NCIT:C4980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"graft versus host disease","termid":"MONDO:0013730"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute graft versus host disease","secondary_identifiers":["Orphanet:99920","MedDRA:10066260","UMLS:C0856825","ICD10CM:D89.810","icd11.foundation:83784921","MEDGEN:208987","SCTID:402355000","GARD:6544","ICD9:279.51"],"synonyms":[{"name":"GVHD, acute","type":"exact"},{"name":"acute GVHD","type":"related"},{"name":"acute graft vs. host disease","type":"exact"},{"name":"fulminant graft versus host disease","type":"exact"},{"name":"graft versus host disease, acute","type":"exact"}],"termid":"MONDO:0020546","xrefs":{"Monarch":{"xref_id":"0020546"}}}


id: PBO:0083325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SPT15/YER148W","termid":"PBO:0083325"}


id: PBO:0043890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 2","termid":"PBO:0043890"}


id: PBO:0073551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHANK2 antisense RNA 3","termid":"PBO:0073551"}


id: MONDO:0800175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, cardiac condition characterized by severely decreased cardiac output, hypoperfusion and end-organ dysfunction, in the presence of adequate intravascular volume. The clinical presentation is variable and may range from subtle hemodynamic alterations to overt cardiovascular collapse. Commonly reported features include dyspnea, crackles, elevated jugular venous pressure, altered mental state, abnormal pulse pressure, oliguria, cold extremities, and increased serum lactate levels.","definition_xrefs":["Orphanet:97292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiogenic shock","secondary_identifiers":["GARD:19362","MEDGEN:48650","UMLS:C0036980","ICD10CM:R57.0","MedDRA:10007625","icd11.foundation:1974956233"],"termid":"MONDO:0800175","xrefs":{"Monarch":{"xref_id":"0800175"}}}


id: GO:0052415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of glucan in other organism involved in symbiotic interaction (obsolete GO:0052415)","synonyms":[{"name":"metabolism by organism of glucan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052415"}


id: MONDO:0009425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypomandibular faciocranial dysostosis is a cranial malformation characterized by facial dysmorphism (proptosis, frontal bossing, midface and zygomatic arches hypoplasia, short nose with anteverted nostrils, microstomia with persistent buccopharyngeal membrane, severe hypoglossia with glossoptosis, severe mandibular hypoplasia, and low set ears) associated with laryngeal hypoplasia and craniosynostosis. Other variable features include cleft palate, optic nerve coloboma and choanal stenosis.","definition_xrefs":["Orphanet:1790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypomandibular faciocranial dysostosis","secondary_identifiers":["SCTID:721845005","OMIM:241310","UMLS:C1855848","GARD:2907","MEDGEN:343427","MESH:C537154"],"synonyms":[{"name":"hypomandibular faciocranial dysostosis","type":"exact"}],"termid":"MONDO:0009425","xrefs":{"Monarch":{"xref_id":"0009425"}}}


id: PBO:0091186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 3","termid":"PBO:0091186"}


id: GO:0071027
data:
  {"annotated_genes":["SJAG_03745","SJAG_03454","SJAG_00854","SJAG_01529","SJAG_00425","SJAG_02720","SJAG_04601","SJAG_00452","SJAG_00961","SJAG_03984","SJAG_03448","SJAG_02879","SJAG_04768","SJAG_02723","SJAG_16455","SJAG_02622","SJAG_02275","SJAG_01431","SJAG_00456","SJAG_01540","SJAG_01064","SJAG_04006","SJAG_04198","SJAG_03883","SJAG_04818","SJAG_03179","SJAG_01818","SJAG_04084","SJAG_04025","SJAG_02005","SJAG_04321","SJAG_04824","SJAG_01412","SJAG_04500","SJAG_05243","SJAG_03939","SJAG_01830","SJAG_00701","SJAG_04586","SJAG_01521","SJAG_04153","SJAG_01331","SJAG_01717","SJAG_01867","SJAG_01191","SJAG_02382","SJAG_01176","SJAG_04360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90972],"is_not":false,"summary":null,"term":"GO:0071027"},{"annotations":[90126],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[118414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"},{"annotations":[95295,96247,72866,96862,101358,71612,89423,93417,115746,74722,116186,89787,72073,73586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[99417,109570,91207,97059,111609,118415,104617,92201,107770,91131,92583,87838,109551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[118416,74948,93787,97573,70677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[116632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[109571,110095,118417,87839,95336,92704,89180,115851,106629,91132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[88714,71245,106588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"},{"annotations":[113063,115678,100097,103307,118418,112165,70682,71244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"},{"annotations":[88715,107773,71240,71613,75434,102403,115748,78052,97575,116188,106787,70678,72074,72867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071035"},{"annotations":[71241,70679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[70680,71242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[106975],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[115751,116191,106791,72075,78053,97581,102407,72868,88720,75435,71243,99942,70681,71614,107779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant RNAs within the nucleus.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00701":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01064":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01717":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04500":null,"SJAG_04586":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear RNA surveillance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA quality control","type":"exact"},{"name":"nuclear aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071027","terms_by_termid":{"GO:0033621":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0120271":null,"GO:0120272":null,"GO:0180036":null}}


id: PBO:0045076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 3","termid":"PBO:0045076"}


id: GO:0048864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate.","definition_xrefs":["CL:0000034","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell development","termid":"GO:0048864"}


id: FYPO:0006880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the center (as observed end-on) of the site of cell division is increased.","definition_xrefs":["PMID:30044717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to center of cell division site","synonyms":[{"name":"abnormal protein localization to cell division site, protein concentrated at division site center","type":"exact"},{"name":"increased protein localization at division center","type":"exact"},{"name":"increased protein recruitment to center of cell division site","type":"related"}],"termid":"FYPO:0006880"}


id: MONDO:0006108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well-demarcated polypoid neoplasm arising from the bile duct epithelium. According to the growth pattern, it is classified as tubular, papillary, or tubulopapillary. Adenomas arising from the extrahepatic bile ducts usually produce symptoms related to biliary obstruction.","definition_xrefs":["NCIT:C2942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"},{"relation_name":"is_a","term_name":"bile duct neoplasm","termid":"MONDO:0021662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct adenoma","secondary_identifiers":["EFO:1000123","MESH:D002759","SCTID:424091006","DOID:5381","ICDO:8160/0","MEDGEN:918","UMLS:C0008309"],"synonyms":[{"name":"CHOLANGIOMA, benign","type":"exact"},{"name":"Cholangioadenoma","type":"exact"},{"name":"Cholangioma","type":"exact"},{"name":"Hepatocholangiocellular adenoma","type":"exact"},{"name":"Hepatocholangioma","type":"exact"},{"name":"adenoma of bile duct","type":"exact"},{"name":"adenoma of the bile duct","type":"exact"},{"name":"bile duct adenoma","type":"exact"},{"name":"bile duct adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006108","xrefs":{"Monarch":{"xref_id":"0006108"}}}


id: GO:1902069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sphingolipid signaling.","definition_xrefs":["GOC:TermGenie","PMID:20870412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of sphingolipid mediated signaling pathway","termid":"GO:1902068"},{"relation_name":"negatively_regulates","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of sphingolipid mediated signaling pathway","synonyms":[{"name":"down regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"down regulation of sphingolipid signaling pathway","type":"related"},{"name":"down-regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"down-regulation of sphingolipid signaling pathway","type":"related"},{"name":"downregulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"downregulation of sphingolipid signaling pathway","type":"related"},{"name":"inhibition of sphingolipid mediated signaling pathway","type":"narrow"},{"name":"inhibition of sphingolipid signaling pathway","type":"related"},{"name":"negative regulation of sphingolipid signaling pathway","type":"related"}],"termid":"GO:1902069"}


id: PBO:0082079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-deoxynucleotidase involved in deoxyribonucleoside monophosphate degradation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; non-essential gene; YBR242W has a paralog, YGL101W, that arose from the whole genome duplication","termid":"PBO:0082079"}


id: PBO:0039461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD11 pseudogene 1","termid":"PBO:0039461"}


id: MONDO:0700180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bronchioloalveolar lung carcinoma that occurs in a cat.","definition_xrefs":["NCIT:C134559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline bronchioloalveolar lung carcinoma","termid":"MONDO:0700180","xrefs":{"Monarch":{"xref_id":"0700180"}}}


id: GO:0022839
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73396,80189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens in response to a specific ion stimulus.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"monoatomic ion-gated channel activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ion gated channel activity","type":"broad"},{"name":"monoatomic ion gated channel activity","type":"exact"}],"termid":"GO:0022839","terms_by_termid":{"GO:0005227":null}}


id: PBO:0016119
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus (mat1-Pc). The pombe sequence reference strain is h-, therefore annotations are attached to this gene and not mat1-Pc","termid":"PBO:0016119"}


id: PBO:0066292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member T, pseudogene","termid":"PBO:0066292"}


id: PBO:0113282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A) binding protein; interacts with the cleavage factor complex CF I, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0113282"}


id: GO:0061181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte development","termid":"GO:0061181"}


id: GO:0006939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.","definition_xrefs":["GOC:jl","GOC:mtg_muscle","ISBN:0198506732","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle contraction","synonyms":[{"name":"visceral muscle contraction","type":"exact"}],"termid":"GO:0006939"}


id: PBO:0075965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 6","termid":"PBO:0075965"}


id: PBO:0046116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2","termid":"PBO:0046116"}


id: PBO:0064797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase methylesterase 1","termid":"PBO:0064797"}


id: MONDO:0011610
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"An extremely rare autosomal recessive glycine metabolism disorder characterized clinically in the single reported case to date by muscle fatigue and a fish-like odor. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["Orphanet:243343"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of serine family metabolism","termid":"MONDO:0019239"},{"relation_name":"is_a","term_name":"disorder of methylamine metabolism","termid":"MONDO:0100477"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1853892","OMIM:605850","DOID:0081446","GARD:17185","MESH:C565278","SCTID:719449007","MEDGEN:343006"],"synonyms":[{"name":"DMG dehydrogenase deficiency","type":"exact"},{"name":"DMGDH deficiency","type":"exact"},{"name":"DMGDHD","type":"related"},{"name":"Dmgdh deficiency","type":"related"},{"name":"dimethylglycine dehydrogenase activity disease","type":"exact"},{"name":"dimethylglycine dehydrogenase deficiency","type":"exact"},{"name":"disorder of dimethylglycine dehydrogenase activity","type":"exact"}],"termid":"MONDO:0011610","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0011610"}}}


id: PBO:0056656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 23","termid":"PBO:0056656"}


id: PBO:0039700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inhibitor 5 pseudogene 1","termid":"PBO:0039700"}


id: PBO:0090716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2","termid":"PBO:0090716"}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: MONDO:0016486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-thalassemia (BT) major is a severe early-onset form of BT characterized by severe anemia requiring regular red blood cell transfusions.","definition_xrefs":["Orphanet:231214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia HBB/LCRB","termid":"MONDO:0013517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"beta-thalassemia major","secondary_identifiers":["ICD9:282.49","UMLS:C0002875","GARD:17162","MEDGEN:283","NCIT:C129699","DOID:0080771","SCTID:26682008"],"synonyms":[{"name":"Beta thalassemia Major","type":"exact"},{"name":"Cooley anaemia","type":"exact"},{"name":"Cooley anemia","type":"exact"},{"name":"Cooley's Anaemia","type":"exact"},{"name":"Cooley's Anemia","type":"exact"},{"name":"Mediterranean anaemia","type":"exact"},{"name":"Mediterranean anemia","type":"exact"}],"termid":"MONDO:0016486","xrefs":{"Monarch":{"xref_id":"0016486"}}}


id: PBO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 7","termid":"PBO:0050190"}


id: PBO:0060994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nescient helix-loop-helix 1","termid":"PBO:0060994"}


id: MONDO:0011357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","secondary_identifiers":["UMLS:C1863618","MEDGEN:355022","OMIM:603669","MESH:C566347"],"synonyms":[{"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","type":"exact"}],"termid":"MONDO:0011357","xrefs":{"Monarch":{"xref_id":"0011357"}}}


id: GO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amine, a weakly basic organic compound that contains an amino or a substituted amino group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"amine binding","termid":"GO:0043176"}


id: PBO:0053656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 709","termid":"PBO:0053656"}


id: GO:0052712
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphosphingolipid + H2O = sphingolipid + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052712","terms_by_termid":{"GO:0052714":null}}


id: GO:0106383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a dAMP from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:21829339","PMID:6605343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dAMP biosynthetic process","termid":"GO:0006170"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dAMP salvage","termid":"GO:0106383"}


id: PBO:0078424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-5","termid":"PBO:0078424"}


id: FYPO:0006255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of ribosomal footprint lengths in a cell includes more short footprints than wild type when the cell undergoes an endoplasmic reticulum unfolded protein response (UPR). Ribosomal footprints are RNA fragments protected by the ribosome, and normally range from 28-31 nucleotides long.","definition_xrefs":["PMID:28945192","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribosome footprint size distribution","termid":"FYPO:0006254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of short ribosome footprints during endoplasmic reticulum unfolded protein response","synonyms":[{"name":"increased level of short ribosome footprints during ER unfolded protein response","type":"exact"},{"name":"increased level of short ribosome footprints during endoplasmic reticulum unfolded protein response during mitotic cell cycle","type":"related"},{"name":"increased level of short ribosome footprints during endoplasmic reticulum unfolded protein response during vegetative growth","type":"exact"},{"name":"increased level of short ribosome footprints during erUPR","type":"exact"},{"name":"increased level of short ribosome footprints upon UPR induction","type":"exact"}],"termid":"FYPO:0006255"}


id: GO:1902692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuroblast proliferation.","definition_xrefs":["GOC:TermGenie","PMID:21168496","GOC:rl","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuroblast proliferation","termid":"GO:1902692"}


id: GO:0015148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-xylose from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["ISBN:0815340729","ISBN:0198506732","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-xylose transmembrane transporter activity","termid":"GO:0015148"}


id: MONDO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-speech impairment-severe cognitive delay syndrome (obsolete MONDO:0018297)","termid":"MONDO:0018297","xrefs":{"Monarch":{"xref_id":"0018297"}}}


id: GO:0046706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CDP metabolic process","termid":"GO:0046704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"CDP catabolic process","synonyms":[{"name":"CDP breakdown","type":"exact"},{"name":"CDP catabolism","type":"exact"},{"name":"CDP degradation","type":"exact"}],"termid":"GO:0046706"}


id: GO:0043159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction.","definition_xrefs":["PMID:9139729","GOC:jl","PMID:8949900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"},{"relation_name":"part_of","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"acrosomal matrix","termid":"GO:0043159"}


id: FYPO:0003676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule is abnormal.","definition_xrefs":["PomBase:mah","GO:0000481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"abnormal 5S RNA maturation","synonyms":[{"name":"abnormal 5S RNA maturation during mitotic cell cycle","type":"related"},{"name":"abnormal 5S RNA maturation during vegetative growth","type":"exact"},{"name":"abnormal 5S RNA processing","type":"exact"},{"name":"abnormal maturation of 5S rRNA","type":"exact"}],"termid":"FYPO:0003676"}


id: MOD:00450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this isotopic label from Unimod entry 57 is deprecated","definition_xrefs":["PubMed:11857757"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00450 acetate labeling reagent light form (K) (obsolete MOD:00450)","termid":"MOD:00450"}


id: PBO:0060851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 2","termid":"PBO:0060851"}


id: MONDO:0007229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachymetatarsus 4","secondary_identifiers":["UMLS:C1862083","OMIM:113475","MEDGEN:396286"],"synonyms":[{"name":"BRACHYMETATARSUS IV","type":"related"},{"name":"Brachymetatarsus type 4","type":"exact"},{"name":"metatarsus IV, short","type":"related"},{"name":"toe, fourth, short","type":"related"}],"termid":"MONDO:0007229","xrefs":{"Monarch":{"xref_id":"0007229"}}}


id: MONDO:0003077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma restricted to local involvement.","definition_xrefs":["NCIT:C7846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"intraocular retinoblastoma","secondary_identifiers":["DOID:4653","MEDGEN:78874","UMLS:C0278717"],"synonyms":[{"name":"intraocular retinoblastoma","type":"exact"}],"termid":"MONDO:0003077","xrefs":{"Monarch":{"xref_id":"0003077"}}}


id: MONDO:0018129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cerebellar ataxia with late-onset spasticity is a rare, genetic neurodegenerative disease characterized by childhood or adolescent-onset of cerebellar ataxia with dysarthria which slowly progresses and associates pyramidal signs, including lower limb spasticity, brisk reflexes, and Babinski and Hoffman signs. Patients typically present cerebellar ataxia with development of increasing asymmetric spasticity in upper and lower limbs, and variable axonal sensory or sensorimotor neuropathy. Additional heterogeneous features, including pes cavus, scoliolis, and abnormalities of the brain (e.g. cerebral atrophy), may also be associated.","definition_xrefs":["Orphanet:352641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002525","MONDO:0002561","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia with late-onset spasticity","secondary_identifiers":["SCTID:763348005","GARD:21525","UMLS:C4706412","MEDGEN:1635411"],"synonyms":[{"name":"autosomal recessive cerebellar ataxia due to GBA2 deficiency","type":"exact"}],"termid":"MONDO:0018129","xrefs":{"Monarch":{"xref_id":"0018129"}}}


id: PBO:0081714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 639","termid":"PBO:0081714"}


id: MONDO:0010563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blue cone monochromatism (BCM) is a recessive X-linked disease characterized by severely impaired color discrimination, low visual acuity, nystagmus, and photophobia, due to dysfunction of the red (L) and green (M) cone photoreceptors. BCM is as an incomplete form of achromatopsia.","definition_xrefs":["Orphanet:16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achromatopsia","termid":"MONDO:0018852"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blue cone monochromacy","secondary_identifiers":["OMIM:303700","SCTID:24704003","MESH:C536238","UMLS:C0339537","DOID:0050679","GARD:917","MEDGEN:87386"],"synonyms":[{"name":"BCM","type":"related"},{"name":"CBBM","type":"related"},{"name":"S cone monochromacy","type":"exact"},{"name":"S cone monochromatism","type":"exact"},{"name":"X-chromosome-linked achromatopsia","type":"related"},{"name":"X-linked achromatopsia incomplete","type":"related"},{"name":"X-linked incomplete achromatopsia","type":"exact"},{"name":"achromatopsia incomplete X-linked","type":"related"},{"name":"atypical X-linked achromatopsia","type":"exact"},{"name":"blue cone monochromacy","type":"exact"},{"name":"blue cone monochromacy, X-linked recessive","type":"exact"},{"name":"blue cone monochromatism","type":"exact"},{"name":"color blindness blue mono cone monochromatic type","type":"related"},{"name":"color blindness, blue monocone monochromatic type","type":"exact"},{"name":"colorblindness, blue-Mono-cone-monochromatic type","type":"related"},{"name":"colour blindness blue mono cone monochromatic type","type":"related"},{"name":"colour blindness, blue monocone monochromatic type","type":"exact"},{"name":"cone dystrophy 5, X-linked","type":"related"},{"name":"incomplete achromatopsia X-linked","type":"related"}],"termid":"MONDO:0010563","xrefs":{"Monarch":{"xref_id":"0010563"}}}


id: FYPO:0002899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"normal protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0002899"}


id: PBO:0071406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 12","termid":"PBO:0071406"}


id: MONDO:0004694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatopulmonary syndrome (HPS) is a lung disease characterized by widening of arteries and veins (dilatation) in the lungs in people who have chronic liver disease. Because of the dilated vases, the workload of the heart increases and the blood pumped to the body does not have enough oxygen, leading to a decreased level of oxygen in the blood (hypoxemia). The normal diameter of the lung vessels ranges between 8 and 15 μm whereas when in HPS rises to between 15 and 500 μm. While many people with HPS don't have any obvious problems, the main reported symptom is shortness of breath (dyspnea) that is worse when standing or sitting up, and is relieved when lying down (platypnea). Symptoms related to chronic liver disease (generally cirrhosis) include small red spots on the skin (spider angiomas) and abnormal vascular dilatations. Some other symptoms that have been described are infections in the brain (brain abscesses), brain bleeding and an increased number of red blood cells in the blood (polycythemia). There is currently no effective medication for HPS. Oxygen therapy may improve the breathing in some cases. Liver transplant is an efficient treatment which improves the symptoms, even in severe cases.","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatopulmonary syndrome","secondary_identifiers":["ICD10CM:K76.81","ICD9:573.5","icd11.foundation:866605228","DOID:900","MEDGEN:109071","MESH:D020065","SCTID:371067004","EFO:1001346","UMLS:C0600452","ICD9:417.8"],"termid":"MONDO:0004694","xrefs":{"Monarch":{"xref_id":"0004694"}}}


id: PBO:0045794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial differentiation related factor 1","termid":"PBO:0045794"}


id: PBO:0088101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Urea amidolyase; contains both urea carboxylase and allophanate hydrolase activities, degrades urea to CO2 and NH3; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation; protein abundance increases in response to DNA replication stress","termid":"PBO:0088101"}


id: PBO:0058540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6085","termid":"PBO:0058540"}


id: MONDO:0022768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyradiculoneuropathy","termid":"MONDO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"chronic polyradiculoneuritis","secondary_identifiers":["GARD:1355"],"termid":"MONDO:0022768","xrefs":{"Monarch":{"xref_id":"0022768"}}}


id: PBO:0085638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in inserting tail-anchored proteins into ER membranes; forms a complex with Get4p; required for efficient mating; involved in shmoo formation and nuclear migration in the pre-zygote; associates with ribosomes","termid":"PBO:0085638"}


id: GO:0102774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 H+ + 4-coumaryl-CoA + 3 malonyl-CoA( = p-coumaroyltriacetic acid lactone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete p-coumaroyltriacetic acid lactone synthase activity (obsolete GO:0102774)","termid":"GO:0102774"}


id: PBO:0080017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 3","termid":"PBO:0080017"}


id: FYPO:0007822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which vacuoles are larger than normal in G0 phase.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles","termid":"FYPO:0007821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"large vacuoles during G0","synonyms":[{"name":"enlarged vacuoles during G0","type":"exact"},{"name":"large vacuoles during cell quiescence","type":"exact"},{"name":"large vacuoles during quiescence","type":"exact"}],"termid":"FYPO:0007822"}


id: RO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between a neuron that is synapsed_to another neuron or a neuron that is connected indirectly to another by a chain of neurons, each synapsed_to the next.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_neural_circuit_with","termid":"RO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_in_neural_circuit_with","termid":"RO:0000301"}


id: GO:0019480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to pyruvate, with D-alanine as an intermediate.","definition_xrefs":["MetaCyc:ALADEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"L-alanine oxidation to pyruvate via D-alanine","termid":"GO:0019480"}


id: GO:0075219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zoospore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of spore encystment on host","termid":"GO:0075215"},{"relation_name":"regulates","term_name":"zoospore encystment on host","termid":"GO:0075218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of zoospore encystment on host","termid":"GO:0075219"}


id: PR:Q9P3B1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1565.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3B1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GTPase-activating protein C1565.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.02c","synonyms":[{"name":"Spom972h-SPAC1565.02c","type":"exact"}],"termid":"PR:Q9P3B1"}


id: MONDO:0016016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toluene embryopathy is a neurodevelopmental teratologic syndrome due to prenatal exposure to toluene. The disease is characterized by prematurity, low birth weight, dysmorphic features (short palpebral fissures, deep set eyes, low set ears, mid-facial hypoplasia, flat nasal bridge, thin upper lip, micrognathia, spatulate fingertips and small fingernails), central nervous system dysfunctions (intellectual disability, microcephaly, language impairment, hyperactivity, visual dysfunction) and postnatal growth delay. Prenatal exposure to toluene occurs as a result of incidental occupational exposure or solvent abuse during pregnancy. The features of toluene embryopathy often overlap with those seen in fetal alcohol syndrome.","definition_xrefs":["Orphanet:1920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"toluene embryopathy","secondary_identifiers":["icd11.foundation:1446076607","UMLS:C2931737","MESH:C538114","GARD:18751","MEDGEN:444131"],"synonyms":[{"name":"Hersh Podruch Weisskopk syndrome","type":"related"},{"name":"microcephaly, central nervous system dysfunction, minor craniofacial and limb anomalies, and variable growth deficiency","type":"related"},{"name":"toluene embryopathy","type":"exact"}],"termid":"MONDO:0016016","xrefs":{"Monarch":{"xref_id":"0016016"}}}


id: MONDO:0016395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"foveal hypoplasia-presenile cataract syndrome","secondary_identifiers":["UMLS:C2931644","GARD:406","MEDGEN:419129","MESH:C537858","Orphanet:2253"],"synonyms":[{"name":"O'Donnell-Pappas syndrome","type":"exact"}],"termid":"MONDO:0016395","xrefs":{"Monarch":{"xref_id":"0016395"}}}


id: PBO:0066340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 2","termid":"PBO:0066340"}


id: MONDO:0006074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma composed of malignant glandular cells and malignant squamous cells.","definition_xrefs":["NCIT:C3727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous carcinoma","secondary_identifiers":["SCTID:403902008","MESH:D018196","EFO:1000073","UMLS:C0206623","MEDGEN:104901","icd11.foundation:1793155313","DOID:4830","ICDO:8560/3"],"synonyms":[{"name":"adenosquamous carcinoma","type":"exact"},{"name":"adenosquamous carcinoma (morphologic abnormality)","type":"exact"},{"name":"adenosquamous cell carcinoma","type":"exact"},{"name":"carcinoma, adenosquamous, malignant","type":"exact"},{"name":"mixed adenocarcinoma and epidermoid carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and epidermoid cell carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and squamous carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006074","xrefs":{"Monarch":{"xref_id":"0006074"}}}


id: PBO:0074461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4 pseudogene 1","termid":"PBO:0074461"}


id: GO:0006743
data:
  {"annotated_genes":["SJAG_04568","SJAG_06603","SJAG_00933","SJAG_01672","SJAG_04642","SJAG_01043","SJAG_04223","SJAG_04000","SJAG_01820","SJAG_01668","SJAG_00721","SJAG_00459","SJAG_01865","SJAG_01866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115518,119636],"is_not":false,"summary":null,"term":"GO:0006743"},{"annotations":[89531],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[72767,74217,74454,79518,88051,64159,119637,119638,76976,79030,74544,73415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquinone metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"coenzyme Q metabolic process","type":"exact"},{"name":"coenzyme Q metabolism","type":"exact"},{"name":"ubiquinone metabolism","type":"exact"}],"termid":"GO:0006743","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:1904775":null}}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: PBO:0080056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 27 X-linked","termid":"PBO:0080056"}


id: GO:0032185
data:
  {"annotated_genes":["SJAG_01143","SJAG_00514","SJAG_00663","SJAG_03146","SJAG_00118","SJAG_01658","SJAG_04375","SJAG_02683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111000],"is_not":false,"summary":null,"term":"GO:0032185"},{"annotations":[100441,104239,72788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000921"},{"annotations":[98148,102087,70530,117335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031106"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising septin complexes and their associated proteins.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_01143":null,"SJAG_01658":null,"SJAG_02683":null,"SJAG_03146":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"septin cytoskeleton organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"septin cytoskeleton organisation","type":"exact"},{"name":"septin cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0032185","terms_by_termid":{"GO:0000921":null,"GO:0031106":null,"GO:0032185":null}}


id: PBO:0066431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG intronic transcript 1","termid":"PBO:0066431"}


id: PR:O74518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.12","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid12","type":"exact"},{"name":"caffeine-induced death protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74518"}


id: PBO:0113519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein conjugated to phosphatidylethanolamine (PE); role in membrane fusion and phagophore expansion during autophagosome formation; deconjugation is also required for biogenesis; targets Atg1p to autophagosomes; binds to the Atg1p-Atg13p complex, triggers its vacuolar degradation; role in vacuolar membrane protein turnover during early stationary phase; component of autophagosomes and Cvt vesicles; targeted to vacuole via AP-3 pathway","termid":"PBO:0113519"}


id: PBO:0048855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A2","termid":"PBO:0048855"}


id: PBO:0052768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 60","termid":"PBO:0052768"}


id: GO:0009328
data:
  {"annotated_genes":["SJAG_02206","SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77927,79244],"is_not":false,"summary":null,"term":"GO:0009328"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of phenylalanine to tRNA(Phe), forming L-phenylalanyl-tRNA(Phe).","definition_xrefs":["PMID:20223217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phenylalanine-tRNA ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0009328","terms_by_termid":{"GO:0009328":null}}


id: PBO:0062921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 8","termid":"PBO:0062921"}


id: PBO:0060525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0060525"}


id: PBO:0079725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor like 1","termid":"PBO:0079725"}


id: PBO:0109050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism induced tumor activator 1","termid":"PBO:0109050"}


id: MONDO:0023571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Kozlowski Rafinski Klicharska syndrome","secondary_identifiers":["MEDGEN:419432","MESH:C537509","UMLS:C2931513"],"synonyms":[{"name":"metaphyseal and epiphyseal dysplasia with unusual facies and cataract","type":"related"}],"termid":"MONDO:0023571","xrefs":{"Monarch":{"xref_id":"0023571"}}}


id: PBO:0075632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2B","termid":"PBO:0075632"}


id: PBO:0038395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-affected_by","termid":"PBO:0038395"}


id: GO:1905812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of motor neuron axon guidance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18434533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of motor neuron axon guidance","synonyms":[{"name":"regulation of motoneuron axon guidance","type":"exact"},{"name":"regulation of motor axon guidance","type":"exact"},{"name":"regulation of motor axon pathfinding","type":"exact"}],"termid":"GO:1905812"}


id: PBO:0041675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM2 antisense RNA 1","termid":"PBO:0041675"}


id: PBO:0039377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin like 2","termid":"PBO:0039377"}


id: MONDO:0010840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by the presence of diffuse pachygyria and arachnoid cysts, psychomotor developmental delay and intellectual disability. Seizures (absence, atonic and generalized tonic-clonic) and, on occasion, headache are also associated.","definition_xrefs":["Orphanet:2798"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pachygyria-intellectual disability-epilepsy syndrome","secondary_identifiers":["MESH:C538091","MEDGEN:333107","OMIM:600176","GARD:409","UMLS:C1838491","SCTID:763861000"],"synonyms":[{"name":"Kuzniecky syndrome","type":"exact"},{"name":"pachygyria with intellectual disability and seizures","type":"related"},{"name":"pachygyria with intellectual disability, seizures, and arachnoid cysts","type":"related"},{"name":"pachygyria with mental retardation and seizures","type":"related"},{"name":"pachygyria with mental retardation, seizures, and arachnoid cysts","type":"related"},{"name":"pachygyria, intellectual disability and epilepsy","type":"related"},{"name":"pachygyria, mental retardation and epilepsy","type":"related"}],"termid":"MONDO:0010840","xrefs":{"Monarch":{"xref_id":"0010840"}}}


id: MONDO:0004289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic, slow growing, well differentiated and non-metastasizing squamous cell carcinoma with pushing margins that arises from the glottic area of the larynx. It usually presents with hoarseness.","definition_xrefs":["NCIT:C8189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx verrucous carcinoma","termid":"MONDO:0002766"},{"relation_name":"is_a","term_name":"glottis squamous cell carcinoma","termid":"MONDO:0004080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis verrucous carcinoma","secondary_identifiers":["MEDGEN:83631","DOID:7583","UMLS:C0280329"],"synonyms":[{"name":"glottic verrucous carcinoma","type":"exact"},{"name":"glottis verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of glottis","type":"exact"},{"name":"verrucous carcinoma of the glottis","type":"exact"}],"termid":"MONDO:0004289","xrefs":{"Monarch":{"xref_id":"0004289"}}}


id: PBO:0032734
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replaced existing SPAC110.05 which was in the wrong frame","termid":"PBO:0032734"}


id: PR:P30666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04285","PRO:DNx","PANTHER:PTHR11630:SF46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.02c","secondary_identifiers":["UniProtKB:P30666"],"synonyms":[{"name":"Spom972h-MCM3","type":"exact"},{"name":"minichromosome maintenance protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30666"}


id: GO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane located at the apical end of the cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"apical plasma membrane","termid":"GO:0016324"}


id: PBO:0074711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74C-1","termid":"PBO:0074711"}


id: MOD:00149
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a four-iron four-sulfur cluster to tetrakis-L-cysteinyl tetrairon tetrasulfide.","definition_xrefs":["PubMed:932007","PubMed:3351918","RESID:AA0140","PubMed:7803404","PubMed:7819196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); shared with dimeric partner","type":"exact"},{"name":"tetra-mu3-sulfido-tetrakis(cysteinato)-1kappaS,2kappaS,3kappaS,4kappaS-tetrahedro-tetrairon","type":"exact"},{"name":"tetra-mu3-sulfidotetrakis(S-cysteinyliron)","type":"exact"},{"name":"tetrakis-L-cysteinyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00149"}


id: MONDO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gonorrhea that involves the seminal vesicle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"vesiculitis","termid":"MONDO:0004767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal seminal vesiculitis","secondary_identifiers":["SCTID:301990003","UMLS:C0578661","icd11.foundation:1226540022","DOID:10400","MEDGEN:662073"],"synonyms":[{"name":"gonococcal seminal vesiculitis (acute)","type":"exact"},{"name":"gonorrhea of seminal vesicle","type":"exact"},{"name":"gonorrhoea of seminal vesicle","type":"exact"},{"name":"seminal vesicle gonorrhea","type":"exact"},{"name":"seminal vesicle gonorrhoea","type":"exact"}],"termid":"MONDO:0001027","xrefs":{"Monarch":{"xref_id":"0001027"}}}


id: PBO:0084447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; MAN2 has a paralog, DSF1, that arose from a segmental duplication","termid":"PBO:0084447"}


id: FYPO:0004791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"increased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"increased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004791"}


id: MONDO:0035944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with hypodiploidy","secondary_identifiers":["GARD:22346","NCIT:C80338","Orphanet:585942","UMLS:C2698312","MEDGEN:437498","DOID:0080647"],"synonyms":[{"name":"Hypodiploid ALL","type":"exact"}],"termid":"MONDO:0035944","xrefs":{"Monarch":{"xref_id":"0035944"}}}


id: MONDO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An early stage of diabetic retinopathy that is characterized by retinal hemorrhage and exudate, but without proliferation of the blood vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic retinopathy","termid":"MONDO:0005266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"background diabetic retinopathy","secondary_identifiers":["SCTID:390834004","UMLS:C0004606","ICD9:362.03","ICD9:362.01","DOID:13208","NCIT:C35668","MEDGEN:2531"],"synonyms":[{"name":"non proliferative diabetic retinopathy","type":"exact"},{"name":"non-proliferative diabetic retinopathy","type":"exact"}],"termid":"MONDO:0001661","xrefs":{"Monarch":{"xref_id":"0001661"}}}


id: MOD:02056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-threonine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-threonine residue","synonyms":[{"name":"XlnkThr","type":"exact"}],"termid":"MOD:02056"}


id: PBO:0029765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_double-strand_break_site","termid":"PBO:0029765"}


id: PATO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's disposition to make its offspring sterile.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lack of fertility in offspring","synonyms":[{"name":"grandchildless","type":"related"}],"termid":"PATO:0001862"}


id: MONDO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the stomach.","definition_xrefs":["NCIT:C5481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-abdominal hemangioma","termid":"MONDO:0002337"},{"relation_name":"is_a","term_name":"benign neoplasm of stomach","termid":"MONDO:0021449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric hemangioma","secondary_identifiers":["MEDGEN:234297","DOID:275","UMLS:C1333770"],"synonyms":[{"name":"angioma of stomach","type":"exact"},{"name":"angioma of the stomach","type":"exact"},{"name":"gastric angioma","type":"exact"},{"name":"gastric hemangioma","type":"exact"},{"name":"hemangioma of stomach","type":"exact"},{"name":"hemangioma of the stomach","type":"exact"},{"name":"stomach hemangioma","type":"exact"}],"termid":"MONDO:0002414","xrefs":{"Monarch":{"xref_id":"0002414"}}}


id: PBO:0059610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 22","termid":"PBO:0059610"}


id: MONDO:0018610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset posterior subcapsular cataract","secondary_identifiers":["GARD:21846","Orphanet:441447","MEDGEN:1842187","UMLS:C5681190"],"termid":"MONDO:0018610","xrefs":{"Monarch":{"xref_id":"0018610"}}}


id: PBO:0043456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 2","termid":"PBO:0043456"}


id: PBO:0081752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 681","termid":"PBO:0081752"}


id: GO:0003832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-dopamine + H2O = dopamine + beta-alanine.","definition_xrefs":["PMID:16299587","RHEA:73467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"beta-alanyl-dopamine hydrolase activity","synonyms":[{"name":"N-beta-alanyl-dopamine hydrolase activity","type":"exact"},{"name":"NBAD hydrolase activity","type":"exact"}],"termid":"GO:0003832"}


id: PBO:0071122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 124","termid":"PBO:0071122"}


id: GO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["PMID:19214193","GOC:mah","PMID:19202061"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked deubiquitination (obsolete GO:0070537)","termid":"GO:0070537"}


id: FYPO:0006699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"decreased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"decreased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"},{"name":"reduced cellular hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0006699"}


id: PR:Q9P7G6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tos4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7G6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor P14E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP14E8.02","synonyms":[{"name":"Spom972h-tos4","type":"exact"}],"termid":"PR:Q9P7G6"}


id: PBO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tre1 family protein, involved in vacuolar protein degradation (predicted)","termid":"PBO:0003244"}


id: PBO:0048124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 5","termid":"PBO:0048124"}


id: PBO:0077462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C divergent transcript","termid":"PBO:0077462"}


id: PR:Q09173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc3 gene.","definition_xrefs":["UniProtKB:Q09173","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.07c","synonyms":[{"name":"PP2C-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc3","type":"exact"}],"termid":"PR:Q09173"}


id: PBO:0113011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with its paralog, ALK1, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of formins and polarisome components in mitosis, and survival after spindle assembly checkpoint delay; negatively regulates the morphogenesis checkpoint in response to polarity insults in opposition to ALK1; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0113011"}


id: MONDO:1012766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the GON4L gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, GON4L-related, cattle","secondary_identifiers":["OMIA:001985-9913"],"synonyms":[{"name":"dwarfism, Fleckvieh cattle","type":"related"}],"termid":"MONDO:1012766","xrefs":{"Monarch":{"xref_id":"1012766"}}}


id: GO:0051764
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89666],"is_not":false,"summary":null,"term":"GO:0051764"}]},"cv_name":"biological_process","definition":"The process in which two or more actin filaments are connected together by proteins that act as crosslinks between the filaments. The crosslinked filaments may be on the same or differing axes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin crosslink formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin bundling","type":"related"},{"name":"actin crosslinking","type":"exact"},{"name":"bridging actin filaments","type":"narrow"},{"name":"formation of actin crosslink","type":"exact"}],"termid":"GO:0051764","terms_by_termid":{"GO:0051764":null}}


id: PBO:0039671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP4B1 antisense RNA 1","termid":"PBO:0039671"}


id: PBO:0057337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 523","termid":"PBO:0057337"}


id: GO:0010098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the suspensor over time, from its formation to the mature structure. The suspensor is the extension at the base of the embryo that anchors the embryo in the embryo sac and pushes it into the endosperm.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suspensor development","termid":"GO:0010098"}


id: FYPO:0000616
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119857,119855,119856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic anaphase is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic anaphase progression","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_01956","SJAG_03351"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal anaphase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic anaphase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in anaphase","type":"exact"},{"name":"mitotic cell cycle progression in anaphase: abnormal","type":"related"}],"termid":"FYPO:0000616","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: GO:0004954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a prostanoid, any compound based on or derived from the prostanoate structure, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid receptor activity","termid":"GO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostanoid receptor activity","termid":"GO:0004954"}


id: GO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary sexual characteristics","termid":"GO:0045137"}


id: PBO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reverse_centromeric_outer_repeat_transcript_level","termid":"PBO:0034489"}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: MONDO:0010566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"},{"relation_name":"is_a","term_name":"RPGR-related retinopathy","termid":"MONDO:0100437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy 1","secondary_identifiers":["OMIM:304020","MESH:C564438","DOID:0111008","UMLS:C1844776","GARD:10652","MEDGEN:336777"],"synonyms":[{"name":"COD1","type":"exact"},{"name":"CORDX1","type":"exact"},{"name":"X-linked cone dystrophy 1","type":"exact"},{"name":"X-linked cone-rod dystrophy type 1","type":"exact"},{"name":"cone dystrophy 1, X-linked","type":"related"},{"name":"cone dystrophy X-linked 1","type":"related"},{"name":"cone-rod dystrophy X-linked 1","type":"related"},{"name":"cone-rod dystrophy, X-linked, 1","type":"related"},{"name":"cone-rod dystrophy, X-linked, 1, X-linked recessive","type":"exact"},{"name":"cone-rod dystrophy, X-linked, type 1","type":"exact"}],"termid":"MONDO:0010566","xrefs":{"Monarch":{"xref_id":"0010566"}}}


