# terms

id: PBO:0054359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1752","termid":"PBO:0054359"}


id: PBO:0074454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC related modular calcium binding 2","termid":"PBO:0074454"}


id: FYPO:0005196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the polyubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein polyubiquitination during cellular response to UV","synonyms":[{"name":"normal protein polyubiquitination during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal protein polyubiquitination during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal protein polyubiquitination during cellular response to ultraviolet light","type":"exact"},{"name":"normal protein polyubiquitinylation during cellular response to UV","type":"related"},{"name":"normal protein polyubiquitylation during cellular response to UV","type":"exact"}],"termid":"FYPO:0005196"}


id: GO:0089714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-alpha-D-mannosamine + 2 NAD+ + H2O = UDP-N-acetyl-alpha-D-mannosaminuronate + 2 NADH + 2 H+.","definition_xrefs":["EC:1.1.1.336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"UDP-N-acetyl-D-mannosamine dehydrogenase activity","secondary_identifiers":["RHEA:25780"],"termid":"GO:0089714"}


id: PBO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal mitochondrial protein","termid":"PBO:0003948"}


id: PBO:0003787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family (predicted)","termid":"PBO:0003787"}


id: FYPO:0005759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late-firing replication origins is increased.","definition_xrefs":["PMID:22987637","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at replication origin","termid":"FYPO:0004961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at late replication origin","synonyms":[{"name":"increased protein localisation to chromatin at late replication origin","type":"exact"},{"name":"increased protein localization to chromatin at late origin","type":"exact"},{"name":"increased protein localization to chromatin at late replication origins during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at late replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0005759"}


id: PBO:0083061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoamide dehydrogenase; the lipoamide dehydrogenase component (E3) of the pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase multi-enzyme complexes; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes; LPD1 has a paralog, IRC15, that arose from the whole genome duplication","termid":"PBO:0083061"}


id: PBO:0109122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoside Hydrolase family Sixteen","termid":"PBO:0109122"}


id: PBO:0005319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13b","termid":"PBO:0005319"}


id: MONDO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Crigler-Najjar syndrome (obsolete MONDO:0016084)","termid":"MONDO:0016084","xrefs":{"Monarch":{"xref_id":"0016084"}}}


id: PBO:0058004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3927","termid":"PBO:0058004"}


id: PBO:0017803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic septin Spn1","termid":"PBO:0017803"}


id: MOD:01120
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","synonyms":[{"name":"2,2,5,7,8-pentamethyl-3,4-dihydro-2H-chromene-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-6-chromansulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-chromane-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulphonyl","type":"exact"},{"name":"3,4-dihydro-2,2,5,7,8-pentamethyl-2H-1-benzopyran-6-sulfonyl","type":"exact"},{"name":"Pmc","type":"exact"},{"name":"PmcRes","type":"exact"}],"termid":"MOD:01120"}


id: MOD:01951
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and an L-serine residue by an ester bond and releasing ammonia to form O-(L-isoglutamyl)-L-serine.","definition_xrefs":["PubMed:17051152","RESID:AA0597#QSX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-serine","termid":"MOD:01977"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-serine (Gln-Ser)","synonyms":[{"name":"(2S)-2-amino-5-[(2S)-2-amino-2-carboxyethoxy]-5-oxopentanoic acid","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)serine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-serine","type":"exact"},{"name":"O3-(isoglutamyl)-serine","type":"exact"}],"termid":"MOD:01951"}


id: PBO:0017544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, splicing factor 45 ortholog (predicted)","termid":"PBO:0017544"}


id: PBO:0077056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1 pseudogene 1","termid":"PBO:0077056"}


id: GO:0032381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"negative regulation of intracellular lipid transport","termid":"GO:0032378"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"negatively_regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular sterol transport","synonyms":[{"name":"down regulation of intracellular sterol transport","type":"exact"},{"name":"down-regulation of intracellular sterol transport","type":"exact"},{"name":"downregulation of intracellular sterol transport","type":"exact"},{"name":"inhibition of intracellular sterol transport","type":"narrow"}],"termid":"GO:0032381"}


id: GO:0033351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-apiose, uridinediphosphoapiose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-D-apiose metabolic process","synonyms":[{"name":"UDP-D-apiose metabolism","type":"exact"}],"termid":"GO:0033351"}


id: PBO:0087557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Rtc1p, along with Mtc5p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; has N-terminal WD-40 repeats and a C-terminal RING motif; null suppresses cdc13-1","termid":"PBO:0087557"}


id: PBO:0081901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 853","termid":"PBO:0081901"}


id: PBO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Overexpressed Cyr1","termid":"PBO:0000712"}


id: GO:0004592
data:
  {"annotated_genes":["SJAG_03679"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72736],"is_not":false,"summary":null,"term":"GO:0004592"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.","definition_xrefs":["EC:6.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"pantoate-beta-alanine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PANTOATE-BETA-ALANINE-LIG-RXN","RHEA:10912"],"synonyms":[{"name":"(R)-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"D-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"pantoate-activating enzyme activity","type":"related"},{"name":"pantoic-activating enzyme activity","type":"related"},{"name":"pantothenate synthetase activity","type":"related"}],"termid":"GO:0004592","terms_by_termid":{"GO:0004592":null}}


id: GO:0048644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of muscle are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle organ morphogenesis","termid":"GO:0048644"}


id: PBO:0053555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 562","termid":"PBO:0053555"}


id: GO:0097540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the axoneme consisting of the inner two microtubule doublets of the 9+2 axoneme occurring in most motile cilia.","definition_xrefs":["GOC:cilia","GOC:krc","PMID:24283352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal central apparatus","termid":"GO:1990716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal central pair","synonyms":[{"name":"axonemal microtubule central pair","type":"exact"},{"name":"axoneme central pair","type":"exact"},{"name":"axoneme microtubule central pair","type":"exact"},{"name":"central pair","type":"broad"},{"name":"central-pair microtubules","type":"related"}],"termid":"GO:0097540"}


id: GO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alcohol from one side of a membrane to the other. An alcohol is any carbon compound that contains a hydroxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}


id: GO:0110001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial protein complex that neutralises its own toxin by complexing the toxin with the antitoxin. The antitoxin can be either a protein or an RNA. The neutralising toxin-antitoxin complex also acts as a transcriptional repressor of the toxin-antitoxin operon.","definition_xrefs":["GOC:bhm","PMID:16109374","PMID:25093388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"toxin-antitoxin complex","termid":"GO:0110001"}


id: SO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that occurs in nature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural","termid":"SO:0000782"}


id: PBO:0069912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1204, pseudogene","termid":"PBO:0069912"}


id: PBO:0071482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 23","termid":"PBO:0071482"}


id: PBO:0069274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 530, pseudogene","termid":"PBO:0069274"}


id: PBO:0068272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 9 (inactive)","termid":"PBO:0068272"}


id: MONDO:0000816
data:
  {"annotated_genes":["SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014352"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"overnutrition","termid":"MONDO:0003916"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"abdominal obesity-metabolic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:411969","MEDGEN:419670","ICD10CM:E88.81","OMIMPS:605552","NCIT:C84442","DOID:0060611","ICD9:277.7","UMLS:C2930930","MESH:C535554"],"synonyms":[{"name":"metabolic syndrome","type":"exact"},{"name":"metabolic syndrome X","type":"narrow"}],"termid":"MONDO:0000816","terms_by_termid":{"MONDO:0014352":null},"xrefs":{"Monarch":{"xref_id":"0000816"}}}


id: MOD:00504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine.","definition_xrefs":["PubMed:11955008","PubMed:11955007","OMSSA:79","PubMed:1386601","PubMed:6436247","Unimod:135#G","PubMed:1326520","PubMed:7543369","RESID:AA0059#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine","synonyms":[{"name":"(cis,cis-delta 5, delta 8)-tetradecadienoyl","type":"related"},{"name":"Myristoyl+Delta:H(-4)","type":"related"},{"name":"N-(C14:2 aliphatic acyl)glycine","type":"exact"},{"name":"myristoylation-4H (two double bonds)","type":"exact"},{"name":"ntermpepmyristoyl4hg","type":"exact"}],"termid":"MOD:00504"}


id: PBO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil permease","termid":"PBO:0001211"}


id: MONDO:0956975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by the pathophysiology phenotype combination (endotype) of early-onset allergic asthma, late-onset eosinophilic asthma, and aspirin-exacerbated respiratory disease.","definition_xrefs":["DOID:0080817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T2-high asthma","termid":"MONDO:0956975","xrefs":{"Monarch":{"xref_id":"0956975"}}}


id: PBO:0053727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 941","termid":"PBO:0053727"}


id: PBO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 8","termid":"PBO:0060711"}


id: MONDO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"macrocephaly, dysmorphic facies, and psychomotor retardation","termid":"MONDO:0014863"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly-severe kyphoscoliosis-overgrowth syndrome","secondary_identifiers":["Orphanet:457359","UMLS:C5681123","MEDGEN:1814470","GARD:17805"],"termid":"MONDO:0018710","xrefs":{"Monarch":{"xref_id":"0018710"}}}


id: PBO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Snt1","termid":"PBO:0002821"}


id: PBO:0024860
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex binds a 3' single-stranded DNA overhang and translocates along an DNA/RNA duplex in the 3' to 5' direction","termid":"PBO:0024860"}


id: PR:O14227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent RNA polymerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.09","synonyms":[{"name":"Spom972h-rdp1","type":"exact"},{"name":"protein rdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14227"}


id: PBO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II beta subunit","termid":"PBO:0015265"}


id: GO:1903891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:22013210","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"regulation of ATF6 branch of UPR","type":"exact"},{"name":"regulation of ATF6 signal transduction pathway","type":"broad"},{"name":"regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903891"}


id: MONDO:0011033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellituss that has material basis in mutation of the locus at chromosome 2q34.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","PMID:8650584","DOID:0110752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 13","secondary_identifiers":["MEDGEN:371337","OMIM:601318","UMLS:C1832474","MESH:C563352"],"synonyms":[{"name":"IDDM13","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 13","type":"related"},{"name":"insulin-dependent diabetes mellitus 13","type":"exact"}],"termid":"MONDO:0011033","xrefs":{"Monarch":{"xref_id":"0011033"}}}


id: FYPO:0006877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that undergoes two or more rounds of cell division, but then lyses during cytokinesis and dies.","definition_xrefs":["PomBase:mah","PMID:30044717"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cell lysis during cytokinesis","termid":"FYPO:0003440"},{"relation_name":"is_a","term_name":"cell lysis during cytokinesis","termid":"FYPO:0003440"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, with abnormal septation","termid":"FYPO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, cell lysis during cytokinesis","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, cytolysis during cytokinesis","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, lysed cell during cytokinesis","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, cell lysis during cytokinesis","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, cell lysis during cytokinesis","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, cell lysis during cytokinesis","type":"exact"}],"termid":"FYPO:0006877"}


id: PBO:0068918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 161, pseudogene","termid":"PBO:0068918"}


id: RO:0008501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein a plant or algae is living on the outside surface of another plant.","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyte_of","termid":"RO:0008501"}


id: GO:0052648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ribitol phosphates, any phosphorylated form of ribitol, the pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol phosphate metabolic process","termid":"GO:0052647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribitol phosphate metabolic process","synonyms":[{"name":"ribitol phosphate metabolism","type":"exact"}],"termid":"GO:0052648"}


id: FYPO:0007553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal G1 to G0 transition","synonyms":[{"name":"normal G1/G0 transition","type":"exact"},{"name":"normal cell cycle quiescence","type":"related"},{"name":"normal establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0007553"}


id: PBO:0088387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein, Tsc2 paralog","termid":"PBO:0088387"}


id: MONDO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the anus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus sarcoma","termid":"MONDO:0002865"},{"relation_name":"is_a","term_name":"rectum leiomyosarcoma","termid":"MONDO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anus leiomyosarcoma","secondary_identifiers":["UMLS:C1332267","NCIT:C5599","MEDGEN:231370","DOID:5267"],"synonyms":[{"name":"anal leiomyosarcoma","type":"exact"},{"name":"anus leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of anus","type":"exact"},{"name":"leiomyosarcoma of the anus","type":"exact"}],"termid":"MONDO:0003358","xrefs":{"Monarch":{"xref_id":"0003358"}}}


id: GO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chloro-L-lysine + AH2 + O2 = A + formaldehyde + H2O + L-2-amino-4-chloropent-4-enoate + NH4(+).","definition_xrefs":["PMID:30867596","RHEA:59888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-chloro-allylglycine synthase activity","termid":"GO:0062146"}


id: PBO:0065371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin 2","termid":"PBO:0065371"}


id: MONDO:0013799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete efavirenz, poor metabolism of (obsolete MONDO:0013799)","secondary_identifiers":["OMIM:614546"],"synonyms":[{"name":"efavirenz central nervous system toxicity, susceptibility to","type":"related"},{"name":"efavirenz, poor metabolism of","type":"exact"}],"termid":"MONDO:0013799","xrefs":{"Monarch":{"xref_id":"0013799"}}}


id: GO:1990226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone methyltransferase enzyme.","definition_xrefs":["GOC:BHF","PMID:19486527","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"histone methyltransferase binding","termid":"GO:1990226"}


id: MONDO:0021092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the fallopian tube. Representative examples of benign neoplasms include papilloma, adenofibroma, and leiomyoma. Representative examples of malignant neoplasms include carcinoma, carcinosarcoma, and adenosarcoma.","definition_xrefs":["NCIT:C3032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube disorder","termid":"MONDO:0002156"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube neoplasm","secondary_identifiers":["MEDGEN:8775","SCTID:126916003","UMLS:C0015558","ICD9:239.5","MESH:D005185"],"synonyms":[{"name":"fallopian tube neoplasm","type":"exact"},{"name":"fallopian tube neoplasm (disease)","type":"exact"},{"name":"fallopian tube tumor","type":"exact"},{"name":"fallopian tube tumour","type":"exact"},{"name":"neoplasm of fallopian tube","type":"exact"},{"name":"neoplasm of the fallopian tube","type":"exact"},{"name":"tumor of fallopian tube","type":"exact"},{"name":"tumor of the fallopian tube","type":"exact"},{"name":"tumour of fallopian tube","type":"exact"},{"name":"tumour of the fallopian tube","type":"exact"}],"termid":"MONDO:0021092","xrefs":{"Monarch":{"xref_id":"0021092"}}}


id: FYPO:0008248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from long terminal repeat elements (LTRs) measured in a cell is lower than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased LTR-derived RNA level","termid":"FYPO:0008248"}


id: GO:0047592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-pyridoxate + NADPH + O2 = 2-(acetamidomethylene)-3-(hydroxymethyl)succinate) + NADP+.","definition_xrefs":["RHEA:11152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-pyridoxate dioxygenase activity","secondary_identifiers":["MetaCyc:5-PYRIDOXATE-DIOXYGENASE-RXN","KEGG_REACTION:R04570","EC:1.14.13.241"],"synonyms":[{"name":"5-pyridoxate oxidase activity","type":"related"}],"termid":"GO:0047592"}


id: PBO:0089124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd6","termid":"PBO:0089124"}


id: GO:0002907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of B cell apoptotic process","termid":"GO:0002904"},{"relation_name":"is_a","term_name":"regulation of mature B cell apoptotic process","termid":"GO:0002905"},{"relation_name":"positively_regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mature B cell apoptotic process","synonyms":[{"name":"activation of mature B cell apoptosis","type":"narrow"},{"name":"positive regulation of mature B cell apoptosis","type":"narrow"},{"name":"stimulation of mature B cell apoptosis","type":"narrow"},{"name":"up regulation of mature B cell apoptosis","type":"exact"},{"name":"up-regulation of mature B cell apoptosis","type":"exact"},{"name":"upregulation of mature B cell apoptosis","type":"exact"}],"termid":"GO:0002907"}


id: PBO:0054174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1547","termid":"PBO:0054174"}


id: PBO:0065493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 2","termid":"PBO:0065493"}


id: PBO:0051526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 2","termid":"PBO:0051526"}


id: MONDO:0013096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 7","secondary_identifiers":["MEDGEN:416602","OMIM:613032","UMLS:C2751638"],"synonyms":[{"name":"GLM7","type":"exact"},{"name":"glioma susceptibility 7","type":"exact"}],"termid":"MONDO:0013096","xrefs":{"Monarch":{"xref_id":"0013096"}}}


id: PBO:0042970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 7","termid":"PBO:0042970"}


id: GO:0047514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->3)-beta-D-glucosyl](n) + phosphate = [(1->3)-beta-D-glucosyl](n-1) + alpha-D-glucose 1-phosphate; substrates include laminarin.","definition_xrefs":["EC:2.4.1.97","MetaCyc:13-BETA-GLUCAN-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"1,3-beta-D-glucan phosphorylase activity","synonyms":[{"name":"1,3-beta-D-glucan:orthophosphate glucosyltransferase activity","type":"related"},{"name":"1,3-beta-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"1,3-beta-glucan phosphorylase activity","type":"exact"},{"name":"laminarin phosphorylase activity","type":"related"},{"name":"laminarin phosphoryltransferase activity","type":"related"}],"termid":"GO:0047514"}


id: PBO:0075145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 1","termid":"PBO:0075145"}


id: PBO:0042622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudal type homeobox 2","termid":"PBO:0042622"}


id: MONDO:0033557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hemophagocytic lymphohistiocytosis, familial, 6","secondary_identifiers":["OMIM:618998","UMLS:C5436563","MEDGEN:1736944","GARD:16400"],"synonyms":[{"name":"FHL6","type":"related"},{"name":"HEMOPHAGOCYTIC LYMPHOHISTIOCYTOSIS, FAMILIAL, 6","type":"related"},{"name":"immune dysregulation and systemic hyperinflammation syndrome","type":"exact"}],"termid":"MONDO:0033557","xrefs":{"Monarch":{"xref_id":"0033557"}}}


id: PBO:0077650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 2","termid":"PBO:0077650"}


id: GO:0062189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + N-(14,15-epoxy-5Z,8Z,11Z-eicosatrienoyl)-ethanolamine + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:53148","PMID:21289075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anandamide epoxidase activity","termid":"GO:0062186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anandamide 14,15 epoxidase activity","termid":"GO:0062189"}


id: GO:0042821
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114697],"is_not":false,"summary":null,"term":"GO:0042821"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, one of the vitamin B6 compounds.","definition_xrefs":["GOC:jl","PMID:21767669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal metabolic process","termid":"GO:0042817"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"pyridoxal biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal anabolism","type":"exact"},{"name":"pyridoxal biosynthesis","type":"exact"},{"name":"pyridoxal formation","type":"exact"},{"name":"pyridoxal synthesis","type":"exact"}],"termid":"GO:0042821","terms_by_termid":{"GO:0042821":null}}


id: PBO:0048230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2A","termid":"PBO:0048230"}


id: PBO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.3","termid":"PBO:0000913"}


id: PBO:0078613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64D, pseudogene","termid":"PBO:0078613"}


id: GO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs.","definition_xrefs":["PMID:12019563","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor inner segment","termid":"GO:0001917"}


id: PBO:0090936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase Ptp4/Dgk1","termid":"PBO:0090936"}


id: PBO:0061773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF","termid":"PBO:0061773"}


id: MONDO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0002280","MONDO:0021190","MONDO:0005570"],"is_obsolete":false,"name":"Fanconi anemia, complementation group W","secondary_identifiers":["MEDGEN:1621245","DOID:0060978","OMIM:617784","UMLS:C4521564"],"synonyms":[{"name":"FANCW","type":"related"},{"name":"Fanconi anemia, complementation group W","type":"exact"}],"termid":"MONDO:0044325","xrefs":{"Monarch":{"xref_id":"0044325"}}}


id: PBO:0078543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 35","termid":"PBO:0078543"}


id: PBO:0078502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 regulated inhibitor of apoptosis 1","termid":"PBO:0078502"}


id: GO:0050100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylene-3-methylsuccinate = dimethylmaleate.","definition_xrefs":["RHEA:23480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"methylitaconate delta-isomerase activity","secondary_identifiers":["EC:5.3.3.6","KEGG_REACTION:R03070","MetaCyc:METHYLITACONATE-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"methylitaconate D-isomerase activity","type":"exact"},{"name":"methylitaconate delta2-delta3-isomerase activity","type":"related"},{"name":"methylitaconate isomerase activity","type":"related"}],"termid":"GO:0050100"}


id: GO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["EC:2.4.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase activity","termid":"GO:0016759"},{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"cellulose synthase (UDP-forming) activity","secondary_identifiers":["MetaCyc:CELLULOSE-SYNTHASE-UDP-FORMING-RXN","RHEA:19929"],"synonyms":[{"name":"1,4-beta-D-glucan synthase activity","type":"related"},{"name":"1,4-beta-glucan synthase activity","type":"related"},{"name":"GS-I","type":"related"},{"name":"UDP-glucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDPglucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,4-glucan synthase activity","type":"related"},{"name":"beta-1,4-glucan synthetase activity","type":"related"},{"name":"beta-1,4-glucosyltransferase activity","type":"related"},{"name":"beta-glucan synthase activity","type":"related"},{"name":"glucan synthase activity","type":"related"},{"name":"uridine diphosphoglucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cellulose glucosyltransferase activity","type":"related"}],"termid":"GO:0016760"}


id: GO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac muscle tissue.","definition_xrefs":["GOC:mtg_heart","PMID:19056682","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac muscle tissue morphogenesis (obsolete GO:0061350)","termid":"GO:0061350"}


id: PBO:0027423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_vegetative_cell","termid":"PBO:0027423"}


id: PATO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being separate or discrete from other skeletal elements.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autogenous","synonyms":[{"name":"free","type":"related"}],"termid":"PATO:0002316"}


id: GO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of a L-amino acid into its enantiomer, the corresponding D-amino acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"},{"relation_name":"is_a","term_name":"chiral amino acid racemization","termid":"GO:0018366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}


id: PBO:0076726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 family AKT coactivator B","termid":"PBO:0076726"}


id: MONDO:0021343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the mouth floor.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"malignant tumor of floor of mouth","termid":"MONDO:0021320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of floor of mouth","secondary_identifiers":["MEDGEN:756825","SCTID:449156009","UMLS:C3164417","NCIT:C9319"],"synonyms":[{"name":"carcinoma of mouth floor","type":"exact"},{"name":"carcinoma of the floor of the mouth","type":"exact"},{"name":"floor of mouth carcinoma","type":"exact"},{"name":"floor of the mouth carcinoma","type":"exact"},{"name":"mouth floor cancer","type":"broad"},{"name":"mouth floor carcinoma","type":"exact"}],"termid":"MONDO:0021343","xrefs":{"Monarch":{"xref_id":"0021343"}}}


id: MONDO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of basal cell carcinoma presenting as a pale, indurated plaque, usually in the upper trunk or face. Morphologically, it is characterized by the presence of strands, cords, and columns of basaloid cells infiltrating the dermis. Perineural invasion may be present and the basaloid cell infiltrate may extend into deeper tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin infiltrative basal cell carcinoma","secondary_identifiers":["UMLS:C0334257","ICDO:8092/3","MEDGEN:87201","NCIT:C27539","DOID:4299"],"synonyms":[{"name":"infiltrating basal cell carcinoma","type":"exact"},{"name":"infiltrative basal cell carcinoma","type":"related"},{"name":"skin infiltrating basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002953","xrefs":{"Monarch":{"xref_id":"0002953"}}}


id: MONDO:0001684
data:
  {"annotated_genes":["SJAG_01077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"}]},"cv_name":"mondo","definition":"Inability of the exocrine pancreas to produce and secrete an adequate amount of digestive enzymes into the small intestine. Patients present with symptoms of malabsorption syndrome, abdominal discomfort, and bloating. Causes include chronic pancreatitis, cystic fibrosis, and autoimmune disorders.","definition_xrefs":["NCIT:C84316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"exocrine pancreatic insufficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:577.8","MEDGEN:75647","SCTID:47367009","UMLS:C0267963","MESH:D010188","ICD10CM:K86.81","DOID:13316"],"synonyms":[{"name":"exocrine pancreas insufficiency","type":"related"},{"name":"exocrine pancreatic insufficiency","type":"exact"},{"name":"pancreatic insufficiency","type":"related"}],"termid":"MONDO:0001684","terms_by_termid":{"MONDO:0012992":null},"xrefs":{"Monarch":{"xref_id":"0001684"}}}


id: GO:0160232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing Integrator and protein phosphatase 2A core enzyme (PP2A-AC) that stably associates with the C-terminus of RNA polymerase II and promotes premature RNA polymerase II transcription termination.","definition_xrefs":["PMID:38570683","PMID:33243860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"INTAC complex","synonyms":[{"name":"integrator-PP2A complex","type":"exact"}],"termid":"GO:0160232"}


id: GO:1901707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to leptomycin B.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"leptomycin B binding","termid":"GO:1901707"}


id: GO:0052209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism by a type IV secretion system, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with other organism via substance secreted by type IV secretion system involved in symbiotic interaction (obsolete GO:0052209)","synonyms":[{"name":"interaction with other organism via substance secreted by type IV secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052209"}


id: GO:0008435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to retard or prevent coagulation. Often used in the context of blood or milk coagulation.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete anticoagulant activity (obsolete GO:0008435)","synonyms":[{"name":"anticoagulant activity","type":"exact"}],"termid":"GO:0008435"}


id: PBO:0017555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic (sporulation) septin Spn2","termid":"PBO:0017555"}


id: GO:0047628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + thymidine = AMP + thymidine 5'-phosphate.","definition_xrefs":["EC:2.7.1.118","MetaCyc:ADP--THYMIDINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ADP-thymidine kinase activity","secondary_identifiers":["RHEA:13413"],"synonyms":[{"name":"ADP:dThd phosphotransferase activity","type":"related"},{"name":"ADP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine diphosphate-thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047628"}


id: GO:0140703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3',3' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 3',5' and 3',5' linkages.","definition_xrefs":["PMID:30787435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cyclic GMP-AMP binding","termid":"GO:0140702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3',3'-cyclic GMP-AMP binding","synonyms":[{"name":"3',3' cyclic-GMP-AMP binding","type":"exact"},{"name":"3',3'-cGAMP binding","type":"exact"},{"name":"3',3'-cGMP-AMP binding","type":"exact"},{"name":"3',3'-cyclic GAMP binding","type":"exact"}],"termid":"GO:0140703"}


id: PBO:0067035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 49, pseudogene","termid":"PBO:0067035"}


id: GO:0002777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antimicrobial peptide. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["ISBN:0781735149","PMID:11807545","GOC:add","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}


id: PBO:0082623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; negative regulator of meiosis; required for repression of a subset of meiotic genes during vegetative growth, binding of histone deacetylase Rpd3p required for activity, contains a NEE box and a WD repeat motif; homologous with Wtm1p; UME1 has a paralog, WTM2, that arose from the whole genome duplication","termid":"PBO:0082623"}


id: GO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antibacterial peptide from a cell or a tissue.","definition_xrefs":["GOC:add","PMID:11807545","PMID:15638771","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"},{"relation_name":"part_of","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0010467"],"is_obsolete":false,"name":"antibacterial peptide secretion","termid":"GO:0002779"}


id: GO:0006649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of a phospholipid from its site of synthesis to the plasma membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"phospholipid transfer to membrane","termid":"GO:0006649"}


id: PBO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_methionine_level","termid":"PBO:0030566"}


id: MONDO:0018029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital factor XIII deficiency is an inherited bleeding disorder due to reduced levels and activity of factor XIII (FXIII) and characterized by hemorrhagic diathesis frequently associated with spontaneous abortions and defective wound healing. Factor XIII deficiency is one of the most rare coagulation factor deficiencies.","definition_xrefs":["Orphanet:331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XIII deficiency","termid":"MONDO:0002241"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital factor XIII deficiency","secondary_identifiers":["GARD:10766","SCTID:50189006","UMLS:C0015530","MEDGEN:4639","NCIT:C131633","ICD9:286.3","DOID:2211","NANDO:2200681"],"synonyms":[{"name":"deficiency, Laki-Lorand factor","type":"exact"},{"name":"factor XIII deficiency","type":"related"},{"name":"factor XIII deficiency disease","type":"exact"},{"name":"fibrin stabilising factor deficiency","type":"related"},{"name":"fibrin stabilizing factor deficiency","type":"related"},{"name":"fibrin-stabilizing factor deficiency","type":"broad"},{"name":"hereditary factor XIII deficiency disease","type":"exact"}],"termid":"MONDO:0018029","xrefs":{"Monarch":{"xref_id":"0018029"}}}


id: PBO:0072829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SANT and BTB domain regulator of CSR","termid":"PBO:0072829"}


id: PBO:0026806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026806"}


id: GO:0031718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cannabinoid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1 cannabinoid receptor binding","synonyms":[{"name":"type 1 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031718"}


id: PR:O14173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csi2 gene.","definition_xrefs":["UniProtKB:O14173","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4D7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.07c","synonyms":[{"name":"Spom972h-csi2","type":"exact"}],"termid":"PR:O14173"}


id: PBO:0028044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytoplasmic_microtubule_polymerization","termid":"PBO:0028044"}


id: MONDO:0019555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"localized lipodystrophy","termid":"MONDO:0019194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"panniculitis and localized lipodystrophy","secondary_identifiers":["Orphanet:90159","UMLS:C5190785","GARD:19128","MEDGEN:1678538"],"synonyms":[{"name":"panniculitis-induced localised lipodystrophy","type":"related"},{"name":"panniculitis-induced localized lipodystrophy","type":"related"}],"termid":"MONDO:0019555","xrefs":{"Monarch":{"xref_id":"0019555"}}}


id: MONDO:0010704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of otopalatodigital syndrome spectrum disorder that is characterized by a generalized skeletal dysplasia, mild intellectual disability, conductive hearing loss, and typical facial anomalies.","definition_xrefs":["Orphanet:90650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 1","secondary_identifiers":["ICD9:759.89","DOID:0111783","icd11.foundation:1442049882","MEDGEN:78542","UMLS:C0265251","OMIM:311300","NCIT:C118845","GARD:5121","SCTID:54036001"],"synonyms":[{"name":"OPD 1 syndrome","type":"exact"},{"name":"OPD I syndrome","type":"exact"},{"name":"OPD syndrome","type":"related"},{"name":"OPD syndrome 1","type":"exact"},{"name":"OPD1","type":"exact"},{"name":"Taybi syndrome","type":"exact"},{"name":"frontootopalatodigital osteodysplasia","type":"related"},{"name":"oto-palato-digital syndrome type 1","type":"exact"},{"name":"otopalatodigital spectrum disorder","type":"related"},{"name":"otopalatodigital syndrome, type 1","type":"exact"},{"name":"otopalatodigital syndrome, type I","type":"exact"},{"name":"otopalatodigital syndrome, type I, X-linked dominant","type":"exact"}],"termid":"MONDO:0010704","xrefs":{"Monarch":{"xref_id":"0010704"}}}


id: PBO:0069605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 882, pseudogene","termid":"PBO:0069605"}


id: PBO:0070221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 154 pseudogene","termid":"PBO:0070221"}


id: PBO:0055488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2922","termid":"PBO:0055488"}


id: PBO:0059718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 26","termid":"PBO:0059718"}


id: PBO:0046723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2A","termid":"PBO:0046723"}


id: PR:O43027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga6 gene.","definition_xrefs":["UniProtKB:O43027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.13","synonyms":[{"name":"Spom972h-rga6","type":"exact"}],"termid":"PR:O43027"}


id: SO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript derived from the transcript of the telomere.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_transcript","synonyms":[{"name":"telomeric transcript","type":"exact"}],"termid":"SO:0001927"}


id: GO:0102652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A9 + 2-oxoglutarate + O2 = gibberellin A51 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A9,2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102652)","termid":"GO:0102652"}


id: MONDO:1012667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in dogs and is characterized by qualitative abnormalities of the glycoprotein von Willebrand factor (vWF) and moderate to severe bleeding due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001339-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, dog","termid":"MONDO:1011612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease II, dog","termid":"MONDO:1012667","xrefs":{"Monarch":{"xref_id":"1012667"}}}


id: PBO:0067985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 287","termid":"PBO:0067985"}


id: MONDO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langerhans cell histiocytosis that occurs during adulthood.","definition_xrefs":["NCIT:C114929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to adulthood","termid":"MONDO:0017026"},{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis","termid":"MONDO:0018310"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Langerhans cell histiocytosis specific to adulthood","secondary_identifiers":["Orphanet:264750","UMLS:C3900100","NANDO:2200031","MEDGEN:859694"],"synonyms":[{"name":"Langerhans cell granulomatosis specific to adulthood","type":"exact"},{"name":"Langerhans cell histiocytosis","type":"broad"},{"name":"adult Langerhans cell histiocytosis","type":"exact"},{"name":"histiocytosis X specific to adulthood","type":"exact"}],"termid":"MONDO:0017029","xrefs":{"Monarch":{"xref_id":"0017029"}}}


id: MONDO:0013603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 20, autosomal dominant","secondary_identifiers":["MEDGEN:481626","UMLS:C3279996","OMIM:614166"],"synonyms":[{"name":"MYP20","type":"exact"},{"name":"myopia 20, autosomal dominant","type":"exact"}],"termid":"MONDO:0013603","xrefs":{"Monarch":{"xref_id":"0013603"}}}


id: GO:0098742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that are at least partially embedded in the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}


id: PBO:0043048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 5","termid":"PBO:0043048"}


id: PBO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent duplication","termid":"PBO:0000148"}


id: MONDO:0008254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet disorder, undefined","secondary_identifiers":["MEDGEN:401405","MESH:C566799","UMLS:C1868258","OMIM:173420"],"synonyms":[{"name":"platelet disorder, undefined","type":"exact"}],"termid":"MONDO:0008254","xrefs":{"Monarch":{"xref_id":"0008254"}}}


id: PBO:0012014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, coatamer related complex subunit Sea3 (predicted)","termid":"PBO:0012014"}


id: MONDO:0006252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infiltrating bladder lymphoepithelioma-like carcinoma (obsolete MONDO:0006252)","termid":"MONDO:0006252","xrefs":{"Monarch":{"xref_id":"0006252"}}}


id: PBO:0049579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone B","termid":"PBO:0049579"}


id: PBO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in actin patch formation; null mutant displays a decreased number of actin cortical patches, increased coat patches, altered patch formation dynamics, and defects in endocytic internalization; interacts with GID complex components and computationally predicted to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; non-essential gene","termid":"PBO:0086039"}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["Unimod:188#I","PubMed:12766232","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: GO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.","definition_xrefs":["GOC:fj","PMID:23034652","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of ion channel activity in another organism","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of acid-sensing ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of ASIC channel activity in other organism","type":"exact"},{"name":"envenomation resulting in modulation of acid-sensing ion channel activity in other organism","type":"exact"}],"termid":"GO:0044733"}


id: PBO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Deb1","termid":"PBO:0001686"}


id: MOD:02009
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-stearoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-stearoylated residue","termid":"MOD:02010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-stearoyl-L-lysine","termid":"MOD:02009"}


id: GO:2001192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation involved in immune response","termid":"GO:2001191"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"negative regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001192"}


id: PBO:0029588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_binding","termid":"PBO:0029588"}


id: GO:0018119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition of a nitric oxide (NO) group to the sulphur (S) atom of a cysteine residue in a protein, to form peptidyl-S-nitrosyl-L-cysteine.","definition_xrefs":["RESID:AA0230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nitrosylation","termid":"GO:0017014"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine S-nitrosylation","synonyms":[{"name":"S-nitrosylation","type":"exact"},{"name":"protein S-nitrosylation","type":"exact"}],"termid":"GO:0018119"}


id: FYPO:0009053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-glutamate as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on glutamate nitrogen source","synonyms":[{"name":"decreased growth on glutamate nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on glutamate nitrogen source","type":"exact"},{"name":"growth defect, slow growth with glutamate nitrogen source","type":"related"},{"name":"reduced cell growth on glutamate nitrogen source","type":"related"},{"name":"slow cell growth on glutamate nitrogen source","type":"narrow"}],"termid":"FYPO:0009053"}


id: GO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:krc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of axon","termid":"GO:0061643"}


id: MOD:00432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue with a secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified residue with neutral loss of phosphate","synonyms":[{"name":"dPhosModRes","type":"exact"}],"termid":"MOD:00432"}


id: PBO:0030617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Calcofluor_White","termid":"PBO:0030617"}


id: PBO:0050750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 12","termid":"PBO:0050750"}


id: PATO:0025000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be used as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potability","synonyms":[{"name":"drinkability","type":"exact"}],"termid":"PATO:0025000"}


id: MONDO:0006420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucosa-associated lymphoid tissue lymphoma (MALT) that arises from the small intestine. The morphologic characteristics are similar to those seen in gastric MALT lymphomas, with the exception of the lymphoepithelial lesions that are less prominent in the small intestine.","definition_xrefs":["NCIT:C5635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine lymphoma","termid":"MONDO:0001852"},{"relation_name":"is_a","term_name":"spleen cancer","termid":"MONDO:0005966"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"small intestinal mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["UMLS:C1336004","MEDGEN:233452"],"synonyms":[{"name":"MALT lymphoma of small bowel","type":"exact"},{"name":"MALT lymphoma of small intestine","type":"exact"},{"name":"MALT lymphoma of the small bowel","type":"exact"},{"name":"MALT lymphoma of the small intestine","type":"exact"},{"name":"MALToma of small bowel","type":"exact"},{"name":"MALToma of small intestine","type":"exact"},{"name":"MALToma of the small bowel","type":"exact"},{"name":"MALToma of the small intestine","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of small bowel","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of small intestine","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of the small bowel","type":"exact"},{"name":"mucosa-associated lymphoid tissue lymphoma of the small intestine","type":"exact"},{"name":"small bowel MALT lymphoma","type":"exact"},{"name":"small bowel MALToma","type":"exact"},{"name":"small bowel mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"small intestinal mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"small intestine MALT lymphoma","type":"exact"},{"name":"small intestine MALToma","type":"exact"},{"name":"small intestine mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006420","xrefs":{"Monarch":{"xref_id":"0006420"}}}


id: PBO:0091205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg","termid":"PBO:0091205"}


id: GO:0034878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisonicotinate + acceptor + H2O = citrazinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisonicotinate dehydrogenase activity (obsolete GO:0034878)","termid":"GO:0034878"}


id: GO:0016495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-X3-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X3-C chemokine has three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-X3-C chemokine receptor activity","termid":"GO:0016495"}


id: PBO:0067399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 505, pseudogene","termid":"PBO:0067399"}


id: PBO:0108704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0108704"}


id: PBO:0054765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2177","termid":"PBO:0054765"}


id: PBO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Dre4","termid":"PBO:0000351"}


id: GO:1990979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of copper ions passing through the blood-brain barrier.","definition_xrefs":["PMID:24614235"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transport across blood-brain barrier (obsolete GO:1990979)","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:1990979"}


id: MONDO:0018447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign cartilaginous neoplasm arising from the bone. It is characterized by the presence of spindle-shaped or stellate chondrocytes, a lobulated growth pattern, myxoid stroma formation, and sometimes multinucleated giant cells. It has been associated with chromosomal rearrangement of 6q13 and 6q25 bands. The most common clinical symptom is mild, localized pain.","definition_xrefs":["NCIT:C3830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"benign chondrogenic neoplasm","termid":"MONDO:0024470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromyxoid fibroma","secondary_identifiers":["ICDO:9241/0","MEDGEN:66375","Orphanet:404507","UMLS:C0221290","EFO:0000332","GARD:21720"],"synonyms":[{"name":"Chondromyxoid fibroma","type":"exact"}],"termid":"MONDO:0018447","xrefs":{"Monarch":{"xref_id":"0018447"}}}


id: PBO:0075853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX2IP pseudogene 1","termid":"PBO:0075853"}


id: PBO:0077882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polymerization promoting protein family member 2","termid":"PBO:0077882"}


id: GO:1900663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of emericellamide biosynthetic process","termid":"GO:1900660"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"positively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of emericellamide A biosynthetic process","synonyms":[{"name":"activation of emericellamide A anabolism","type":"exact"},{"name":"activation of emericellamide A biosynthesis","type":"exact"},{"name":"activation of emericellamide A biosynthetic process","type":"narrow"},{"name":"activation of emericellamide A formation","type":"exact"},{"name":"activation of emericellamide A synthesis","type":"exact"},{"name":"positive regulation of emericellamide A anabolism","type":"exact"},{"name":"positive regulation of emericellamide A biosynthesis","type":"exact"},{"name":"positive regulation of emericellamide A formation","type":"exact"},{"name":"positive regulation of emericellamide A synthesis","type":"exact"},{"name":"up regulation of emericellamide A anabolism","type":"exact"},{"name":"up regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up regulation of emericellamide A formation","type":"exact"},{"name":"up regulation of emericellamide A synthesis","type":"exact"},{"name":"up-regulation of emericellamide A anabolism","type":"exact"},{"name":"up-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up-regulation of emericellamide A formation","type":"exact"},{"name":"up-regulation of emericellamide A synthesis","type":"exact"},{"name":"upregulation of emericellamide A anabolism","type":"exact"},{"name":"upregulation of emericellamide A biosynthesis","type":"exact"},{"name":"upregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"upregulation of emericellamide A formation","type":"exact"},{"name":"upregulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900663"}


id: PBO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm2","termid":"PBO:0003515"}


id: PBO:0029780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0029780"}


id: GO:1901869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecgonine methyl ester.","definition_xrefs":["PMID:22665766","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"ecgonine methyl ester metabolic process","termid":"GO:1901867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ecgonine methyl ester biosynthetic process","synonyms":[{"name":"ecgonine methyl ester anabolism","type":"exact"},{"name":"ecgonine methyl ester biosynthesis","type":"exact"},{"name":"ecgonine methyl ester formation","type":"exact"},{"name":"ecgonine methyl ester synthesis","type":"exact"}],"termid":"GO:1901869"}


id: _global:has_dividend_quality
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"has_ratio_quality","termid":"_global:has_ratio_quality"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_dividend_quality","termid":"_global:has_dividend_quality"}


id: GO:1904819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","PMID:15840053","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parietal peritoneum development","synonyms":[{"name":"peritoneal cavity lining development","type":"exact"}],"termid":"GO:1904819"}


id: GO:0010024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochromobilin, which involves the oxidative cleavage of heme by a heme oxygenase(HO) to form biliverdin IX alpha.","definition_xrefs":["PMID:11402195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"phytochromobilin metabolic process","termid":"GO:0051202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"phytochromobilin biosynthetic process","synonyms":[{"name":"phytochromobilin anabolism","type":"exact"},{"name":"phytochromobilin biosynthesis","type":"exact"},{"name":"phytochromobilin formation","type":"exact"},{"name":"phytochromobilin synthesis","type":"exact"}],"termid":"GO:0010024"}


id: GO:0044555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency of heart contraction of another organism.","definition_xrefs":["PMID:20923766","GOC:jl","GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of heart rate in another organism (obsolete GO:0044555)","synonyms":[{"name":"negative regulation of heart rate in other organism","type":"exact"}],"termid":"GO:0044555"}


id: GO:0044665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL1 or MLL2 in human, or equivalent in other species.","definition_xrefs":["GOC:sart","PMID:21875999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"MLL1/2 complex","synonyms":[{"name":"Trx-containing complex","type":"exact"}],"termid":"GO:0044665"}


id: MOD:00375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","PubMed:10978343","Unimod:425#K","PubMed:12686488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated lysine","termid":"MOD:00681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-dihydroxy-L-lysine","synonyms":[{"name":"(2S,4Xi,5Xi)-2,6-diamino-4,5-dihydroxyhexanoic acid","type":"exact"},{"name":"4,5-dihydroxy-L-lysine","type":"exact"},{"name":"4,5-dihydroxylated L-lysine","type":"exact"},{"name":"45Hy2Lys","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 4,5-dihydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta,gamma-dihydroxycaproic acid","type":"exact"},{"name":"delta,gamma-dihydroxylysine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00375"}


id: PBO:0072990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein homolog 1","termid":"PBO:0072990"}


id: GO:0060323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the head are generated and organized. The head is the anterior-most division of the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"body morphogenesis","termid":"GO:0010171"},{"relation_name":"part_of","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head morphogenesis","termid":"GO:0060323"}


id: PBO:0004000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin Trx2","termid":"PBO:0004000"}


id: GO:0036311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N,N'-diacetylchitobiose = acetate + N-acetyl-beta-D-glucosaminyl-(1->4)-D-glucosamine.","definition_xrefs":["RHEA:27469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"chitin disaccharide deacetylase activity","secondary_identifiers":["EC:3.5.1.105","MetaCyc:RXN-11313"],"synonyms":[{"name":"chitin oligosaccharide amidohydrolase activity","type":"related"},{"name":"chitin oligosaccharide deacetylase activity","type":"related"},{"name":"chitobiose amidohydrolase activity","type":"related"}],"termid":"GO:0036311"}


id: MONDO:0022887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofrontonasal syndrome Teebi type","termid":"MONDO:0022887","xrefs":{"Monarch":{"xref_id":"0022887"}}}


id: PBO:0081014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 2","termid":"PBO:0081014"}


id: PBO:0073052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 10 (gene/pseudogene)","termid":"PBO:0073052"}


id: PBO:0081388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 227","termid":"PBO:0081388"}


id: PBO:0063205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 1","termid":"PBO:0063205"}


id: PBO:0110486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF10 pseudogene 2","termid":"PBO:0110486"}


id: PBO:0083075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dioxygenase that catalyzes alpha-oxygenation of 2-hydroxy fatty acids; involved in metabolism of phytosphingosine; not an essential gene","termid":"PBO:0083075"}


id: _global:indirectly_causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_causally_upstream_of","secondary_identifiers":["RO:0012011"],"termid":"_global:indirectly_causally_upstream_of"}


id: GO:0035963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-13 stimulus.","definition_xrefs":["GOC:sjw","PMID:20100461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-13","termid":"GO:0035962"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-13","synonyms":[{"name":"cellular response to IL-13","type":"exact"}],"termid":"GO:0035963"}


id: GO:0061357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["GOC:bf","PMID:19223472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of Wnt protein secretion","termid":"GO:0061356"},{"relation_name":"positively_regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Wnt protein secretion","termid":"GO:0061357"}


id: PBO:0029248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere_during_mitotic_metaphase","termid":"PBO:0029248"}


id: PBO:0085365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosyl-glycinamide transformylase; catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway","termid":"PBO:0085365"}


id: PR:000049784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-) that has been phosphorylated on two consecutive residues equivalent to Ser-35 and Ser-36 in the sequence represented by UniProtKB:Q9UUG5-1. Example: UniProtKB:Q9UUG5-1, Ser-35/Ser-36, MOD:00046.","definition_xrefs":["PMID:19570908","PMID:19029336","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UUG5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rlc1/Phos(S35,S36)","pombase_gene_id":"SPAC926.03","synonyms":[{"name":"PomBase_original_PRO_term_name: myosin regulatory light chain 1 phosphorylated 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rlc1p phosphorylated 1","type":"broad"},{"name":"myosin II regulatory light chain Rlc1p Ser-35/Ser-36 phosphorylated","type":"related"},{"name":"rlc1/Phos(S35,S36)","type":"exact"}],"termid":"PR:000049784"}


id: PATO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000550 red light sensitivity value (obsolete PATO:0000550)","termid":"PATO:0000550"}


id: GO:0036055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-succinyl-L-lysyl-[protein] + NAD+ + H2O = 2''-O-succinyl-ADP-D-ribose + nicotinamide + L-lysyl-[protein].","definition_xrefs":["RHEA:47668","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"protein-succinyllysine desuccinylase activity","synonyms":[{"name":"peptidyl-succinyllysine desuccinylase activity","type":"exact"},{"name":"succinyl lysine desuccinylase activity","type":"broad"},{"name":"succinyllysine desuccinylase activity","type":"broad"}],"termid":"GO:0036055"}


id: MOD:00256
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that dioxygenates an L-methionine residue to L-methionine sulfone.","definition_xrefs":["RESID:AA0251","PubMed:9252331","DeltaMass:205","PubMed:12686488","Unimod:425#M","PubMed:7786407","OMSSA:115","PubMed:7791219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-methionine","termid":"MOD:00709"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine sulfone","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfonyl)butanoic acid","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-methionine S,S-dioxide","type":"exact"},{"name":"L-methionine sulfone","type":"exact"},{"name":"MOD_RES Methionine sulfone","type":"exact"},{"name":"MetO2","type":"exact"},{"name":"MethionylSulphone","type":"exact"},{"name":"Oxidation of Methionine (to Sulphone)","type":"exact"},{"name":"S,S-dioxymethionine","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"suphonem","type":"exact"}],"termid":"MOD:00256"}


id: GO:0043021
data:
  {"annotated_genes":["SJAG_04351","SJAG_00681","SJAG_01249","SJAG_04635","SJAG_01759","SJAG_05332","SJAG_03012","SJAG_00750","SJAG_02812","SJAG_03841","SJAG_01558","SJAG_01117","SJAG_03882","SJAG_03232","SJAG_00887","SJAG_04874","SJAG_00188","SJAG_01806","SJAG_03658","SJAG_05000","SJAG_01917","SJAG_03291","SJAG_02746","SJAG_02558","SJAG_00231","SJAG_04560","SJAG_04599","SJAG_02279","SJAG_01567","SJAG_02189","SJAG_03788","SJAG_03548","SJAG_02061","SJAG_04914","SJAG_02171","SJAG_01517","SJAG_03094","SJAG_00360","SJAG_01840","SJAG_01074","SJAG_01438","SJAG_01176","SJAG_02026","SJAG_02856","SJAG_03629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062064"},{"annotations":[72391,107597,105912,99033,100783,102949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097177"},{"annotations":[71409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990275"},{"annotations":[71675,61980,76962,76990,79631,88724,73977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043023"},{"annotations":[99776,77867,74855,103849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043024"},{"annotations":[117943,62967,66592,80339,60656,73338,91649,68831,77260,80717,110926,78002,98625,78568,112975,101614,89142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043022"},{"annotations":[94619,72790,71600,71009,80089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005047"},{"annotations":[70826,87776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070990"},{"annotations":[70693,114161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990446"},{"annotations":[114162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990447"}]},"cv_name":"molecular_function","definition":"Binding to a complex of RNA and protein.","definition_xrefs":["GOC:vk","GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00231":null,"SJAG_00360":null,"SJAG_00681":null,"SJAG_00750":null,"SJAG_00887":null,"SJAG_01074":null,"SJAG_01117":null,"SJAG_01176":null,"SJAG_01249":null,"SJAG_01438":null,"SJAG_01517":null,"SJAG_01558":null,"SJAG_01567":null,"SJAG_01759":null,"SJAG_01806":null,"SJAG_01840":null,"SJAG_01917":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02171":null,"SJAG_02189":null,"SJAG_02279":null,"SJAG_02558":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_03012":null,"SJAG_03094":null,"SJAG_03232":null,"SJAG_03291":null,"SJAG_03548":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03788":null,"SJAG_03841":null,"SJAG_03882":null,"SJAG_04351":null,"SJAG_04560":null,"SJAG_04599":null,"SJAG_04635":null,"SJAG_04874":null,"SJAG_04914":null,"SJAG_05000":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribonucleoprotein complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNP binding","type":"exact"},{"name":"protein-RNA complex binding","type":"exact"},{"name":"ribonucleoprotein binding","type":"exact"}],"termid":"GO:0043021","terms_by_termid":{"GO:0005047":null,"GO:0043022":null,"GO:0043023":null,"GO:0043024":null,"GO:0062064":null,"GO:0070990":null,"GO:0097177":null,"GO:1990275":null,"GO:1990446":null,"GO:1990447":null}}


id: PBO:0033764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_eukaryotic_translation_initiation_factor_2B_complex_assembly","termid":"PBO:0033764"}


id: GO:0018001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal tyrosine of proteins to form the derivative N-acetyl-L-valine.","definition_xrefs":["RESID:AA0054"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-valine acetylation (obsolete GO:0018001)","termid":"GO:0018001"}


id: PBO:0087021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 40S subunit protein S0A; required for maturation of 18S rRNA along with Rps0Bp; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal; homologous to human ribosomal protein SA and bacterial S2; RPS0A has a paralog, RPS0B, that arose from the whole genome duplication;","termid":"PBO:0087021"}


id: GO:0030762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydrocolumbamine + S-adenosyl-L-methionine(1+) = S-adenosyl-L-homocysteine + H+ + tetrahydropalmatine.","definition_xrefs":["RHEA:22536","EC:2.1.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tetrahydrocolumbamine 2-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.89-RXN","KEGG_REACTION:R04077"],"synonyms":[{"name":"S-adenosyl-L-methionine:5,8,13,13a-tetrahydrocolumbamine 2-O-methyltransferase activity","type":"related"},{"name":"tetrahydrocolumbamine methyltransferase activity","type":"related"}],"termid":"GO:0030762"}


id: MONDO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rheumatic heart disease (obsolete MONDO:0000472)","termid":"MONDO:0000472","xrefs":{"Monarch":{"xref_id":"0000472"}}}


id: MONDO:1010774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus, non-human animal","termid":"MONDO:1010138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, horse","secondary_identifiers":["OMIA:001188-9796"],"termid":"MONDO:1010774","xrefs":{"Monarch":{"xref_id":"1010774"}}}


id: MONDO:0043197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ruvalcaba churesigaew myhre syndrome","secondary_identifiers":["MESH:C537190","MEDGEN:419412","UMLS:C2931437"],"synonyms":[{"name":"onset of senility in the early teens, atrophic skin, hypogonadism, retinal and vascular sclerosis","type":"related"}],"termid":"MONDO:0043197","xrefs":{"Monarch":{"xref_id":"0043197"}}}


id: FYPO:0004604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0003880"],"synonyms":[{"name":"decreased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at telomere","type":"related"},{"name":"reduced chromatin silencing at subtelomere","type":"exact"}],"termid":"FYPO:0004604"}


id: PATO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having susceptibilty toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility toward","termid":"PATO:0001043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptible toward","synonyms":[{"name":"susceptible","type":"exact"}],"termid":"PATO:0001152"}


id: PBO:0048902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 26","termid":"PBO:0048902"}


id: MONDO:0044272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body mass index quantitative trait locus 9 (obsolete MONDO:0044272)","secondary_identifiers":["OMIM:602025"],"synonyms":[{"name":"BMIQ9","type":"related"},{"name":"body MASS index quantitative trait locus 9","type":"related"},{"name":"obesity, severe, susceptibility to, BMIQ9","type":"exact"},{"name":"obesity, susceptibility to","type":"related"}],"termid":"MONDO:0044272","xrefs":{"Monarch":{"xref_id":"0044272"}}}


id: GO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chronic inflammatory response","termid":"GO:0002678"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"},{"relation_name":"positively_regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chronic inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of chronic inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of chronic inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of chronic inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002876"}


id: MONDO:0013538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-2-macroglobulin deficiency (obsolete MONDO:0013538)","secondary_identifiers":["OMIM:614036","MESH:C566304"],"synonyms":[{"name":"A2MD","type":"related"},{"name":"ALPHA-2-macroglobulin deficiency","type":"related"},{"name":"alpha-2-macroglobulin deficiency","type":"exact"}],"termid":"MONDO:0013538","xrefs":{"Monarch":{"xref_id":"0013538"}}}


id: PR:O94319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SEC13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11024:SF2","PRO:DNx","OMA:SCHPO03972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.15","secondary_identifiers":["UniProtKB:O94319"],"synonyms":[{"name":"Spom972h-SEC13","type":"exact"}],"termid":"PR:O94319"}


id: PR:Q09779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21597:SF0","PRO:DNx","OMA:SCHPO00263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.14","secondary_identifiers":["UniProtKB:Q09779"],"synonyms":[{"name":"Spom972h-THOC2","type":"exact"}],"termid":"PR:Q09779"}


id: PBO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Pmp20","termid":"PBO:0015261"}


id: GO:0043874
data:
  {"annotated_genes":["SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79586],"is_not":false,"summary":null,"term":"GO:0043874"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions:5-methylsulfanyl-2,3-dioxopentyl phosphate + H2O = 1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + phosphate.","definition_xrefs":["RHEA:21700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"acireductone synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.3.77","Reactome:R-HSA-1237129","MetaCyc:3.1.3.77-RXN"],"synonyms":[{"name":"5-(methylthio)-2,3-dioxopentyl-phosphate phosphohydrolase (isomerizing)","type":"related"},{"name":"E-1","type":"related"},{"name":"E-1 enolase-phosphatase","type":"broad"}],"termid":"GO:0043874","terms_by_termid":{"GO:0043874":null}}


id: GO:0021960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","ISBN:0878937420","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior commissure morphogenesis","termid":"GO:0021960"}


id: MONDO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare malignant neoplasm that arises from the fallopian tube and is characterized by the presence of a benign epithelial component and a sarcomatous component.","definition_xrefs":["NCIT:C40125"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"fallopian tube carcinosarcoma","termid":"MONDO:0006207"},{"relation_name":"is_a","term_name":"fallopian tube cancer","termid":"MONDO:0002158"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube adenosarcoma","secondary_identifiers":["UMLS:C1517121","DOID:1973","MEDGEN:275872"],"synonyms":[{"name":"adenosarcoma of fallopian tube","type":"exact"},{"name":"fallopian tube Mullerian adenosarcoma","type":"exact"},{"name":"fallopian tube Müllerian adenosarcoma","type":"exact"},{"name":"fallopian tube adenosarcoma","type":"exact"},{"name":"fallopian tube mullerian adenosarcoma","type":"exact"}],"termid":"MONDO:0002162","xrefs":{"Monarch":{"xref_id":"0002162"}}}


id: PBO:0087028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication","termid":"PBO:0087028"}


id: GO:0141123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the skin of another organism, leading to damage or temporary subversion of the skin.","definition_xrefs":["PMID:28194160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of tissue in another organism","termid":"GO:0141062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermonecrosis in another organism","termid":"GO:0141123"}


id: MONDO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the peritoneal cavity. Representative examples include adenomatoid tumor and disseminated peritoneal leiomyomatosis.","definition_xrefs":["NCIT:C8612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal benign neoplasm","secondary_identifiers":["UMLS:C0496874","MEDGEN:141678","DOID:0060117"],"synonyms":[{"name":"benign peritoneal neoplasm","type":"exact"},{"name":"peritoneum benign neoplasm","type":"exact"}],"termid":"MONDO:0000650","xrefs":{"Monarch":{"xref_id":"0000650"}}}


id: GO:0070522
data:
  {"annotated_genes":["SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76010],"is_not":false,"summary":null,"term":"GO:0070522"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that has endonuclease activity specific for bubble structures characteristic of certain DNA lesions. The subunits are known as XPF/ERCC4 and ERCC1 in mammals, and Rad1p and Rad10p in S. cerevisiae.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ERCC4-ERCC1 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Rad1-Rad10 complex","type":"exact"},{"name":"XPF-ERCC1 complex","type":"exact"}],"termid":"GO:0070522","terms_by_termid":{"GO:0070522":null}}


id: PBO:0082148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-coenzymeA:ethanol O-acyltransferase; responsible for the major part of medium-chain fatty acid ethyl ester biosynthesis during fermentation; possesses short-chain esterase activity; may be involved in lipid metabolism and detoxification; EEB1 has a paralog, EHT1, that arose from the whole genome duplication","termid":"PBO:0082148"}


id: MONDO:1012273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombopathia, non-human animal","termid":"MONDO:1011695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopathia, dog","secondary_identifiers":["OMIA:001003-9615"],"termid":"MONDO:1012273","xrefs":{"Monarch":{"xref_id":"1012273"}}}


id: MONDO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital anomaly where the heart is formed outside of the thoracic cavity. It is associated with intracardiac lesions and other structural malformations.","definition_xrefs":["NCIT:C111643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopia cordis","secondary_identifiers":["MEDGEN:41703","GARD:21877","Orphanet:448270","HP:0001683","ICD9:746.87","UMLS:C0013580","SCTID:78250005","icd11.foundation:285576893","MESH:D054083"],"synonyms":[{"name":"ectopia cordis","type":"exact"},{"name":"ectopia cordis (disease)","type":"exact"}],"termid":"MONDO:0018664","xrefs":{"Monarch":{"xref_id":"0018664"}}}


id: PBO:0017874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc1","termid":"PBO:0017874"}


id: PBO:0073347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8 pseudogene 1","termid":"PBO:0073347"}


id: MONDO:0956965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma SHH activated that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and the absence of TP53 mutations.","definition_xrefs":["DOID:0080705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma SHH activated","termid":"MONDO:0850197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated and TP53 wild-type","secondary_identifiers":["NCIT:C129443"],"termid":"MONDO:0956965","xrefs":{"Monarch":{"xref_id":"0956965"}}}


id: FYPO:0006908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type) in the cell cycle following spore germination. A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["PMID:872890","PomBase:mah","GO:0031568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G1 cell size control checkpoint","termid":"FYPO:0006905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint following spore germination","synonyms":[{"name":"normal G1 cell size control checkpoint following spore germination during mitotic cell cycle","type":"related"},{"name":"normal mitotic G1 cell size control checkpoint activation following spore germination","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following spore germination during vegetative growth","type":"exact"}],"termid":"FYPO:0006908"}


id: FYPO:0004734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of degradation of misfolded or incompletely synthesized protein is decreased.","definition_xrefs":["GO:0006515","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased misfolded protein degradation","synonyms":[{"name":"decreased misfolded or incompletely synthesized protein catabolic process","type":"exact"},{"name":"decreased misfolded or incompletely synthesized protein degradation","type":"exact"},{"name":"decreased misfolded protein degradation during mitotic cell cycle","type":"related"},{"name":"decreased misfolded protein degradation during vegetative growth","type":"exact"},{"name":"misfolded or incompletely synthesized protein catabolism","type":"exact"},{"name":"reduced misfolded protein degradation","type":"exact"}],"termid":"FYPO:0004734"}


id: MONDO:0015855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital breast hypoplasia/aplasia","secondary_identifiers":["UMLS:C0432357","GARD:9489","MEDGEN:98489","OMIMPS:113700","Orphanet:180188"],"synonyms":[{"name":"breasts and/or nipples, aplasia or hypoplasia of","type":"exact"},{"name":"isolated congenital amastia","type":"exact"}],"termid":"MONDO:0015855","xrefs":{"Monarch":{"xref_id":"0015855"}}}


id: MONDO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervicomedullary junction neoplasm","secondary_identifiers":["UMLS:C1332923","NCIT:C5423","DOID:4707","MEDGEN:272453"],"synonyms":[{"name":"cervicomedullary junction neoplasms","type":"exact"},{"name":"cervicomedullary junction tumor","type":"exact"},{"name":"cervicomedullary junction tumour","type":"exact"},{"name":"neoplasm of cervicomedullary junction","type":"exact"},{"name":"neoplasm of the cervicomedullary junction","type":"exact"},{"name":"tumor of cervicomedullary junction","type":"exact"},{"name":"tumor of the cervicomedullary junction","type":"exact"},{"name":"tumour of cervicomedullary junction","type":"exact"},{"name":"tumour of the cervicomedullary junction","type":"exact"}],"termid":"MONDO:0003108","xrefs":{"Monarch":{"xref_id":"0003108"}}}


id: PBO:0003527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein Hob3","termid":"PBO:0003527"}


id: PBO:0110341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4B (Chido/Rodgers blood group)","termid":"PBO:0110341"}


id: PBO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 57","termid":"PBO:0052765"}


id: PBO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G","termid":"PBO:0043283"}


id: GO:2000129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of octopamine or tyramine signaling pathway","termid":"GO:2000126"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"negatively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of octopamine signaling pathway","synonyms":[{"name":"negative regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000129"}


id: MONDO:0700070
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86208,86207,86206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[87018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the POMT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"myopathy caused by variation in POMT1","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"POMT1 myopathy","type":"exact"},{"name":"POMT1-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in POMT1","type":"exact"}],"termid":"MONDO:0700070","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013159":null},"xrefs":{"Monarch":{"xref_id":"0700070"}}}


id: PBO:0055945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 53","termid":"PBO:0055945"}


id: PBO:0013827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family Psl1 (predicted)","termid":"PBO:0013827"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: PBO:0004548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.3","termid":"PBO:0004548"}


id: PBO:0076025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24","termid":"PBO:0076025"}


id: MONDO:0800031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central hypoventilation syndrome, congenital","secondary_identifiers":["OMIMPS:209880","UMLS:C1275808","MEDGEN:220902"],"termid":"MONDO:0800031","xrefs":{"Monarch":{"xref_id":"0800031"}}}


id: PBO:0078444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 2","termid":"PBO:0078444"}


id: FYPO:0005470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glutamate synthase (NADH) activity","synonyms":[{"name":"abnormal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abnormal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abnormal NADH: GOGAT activity","type":"related"},{"name":"abnormal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005470"}


id: PBO:0062313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily W member 1 pseudogene","termid":"PBO:0062313"}


id: PR:Q9P6J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trehalose-6-phosphate hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Mal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.07","secondary_identifiers":["UniProtKB:Q9P6J3"],"synonyms":[{"name":"SPBC1683.07","type":"related"},{"name":"Spom972h-treC","type":"exact"},{"name":"maltase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9P6J3"}


id: GO:0102094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + a demethylmenaquinol = S-adenosyl-L-homocysteine + H+ + a menaquinol.","definition_xrefs":["GOC:pz","PMID:1444716","PMID:9045837"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity (obsolete GO:0102094)","termid":"GO:0102094"}


id: GO:0062161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a pyocyanine biosynthetic process.","definition_xrefs":["PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"pyocyanine biosynthetic process","termid":"GO:0106220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyocyanine biosynthetic process","synonyms":[{"name":"regulation of pyocyanin biosynthetic process","type":"exact"}],"termid":"GO:0062161"}


id: SO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding regions of DNA sequence that separate genes coding for the 28S, 5.8S, and 18S ribosomal RNAs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_spacer_region","termid":"SO:0000638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_transcribed_spacer_region","synonyms":[{"name":"internal transcribed spacer region","type":"exact"}],"termid":"SO:0000639"}


id: PBO:0016042
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PTBP3","termid":"PBO:0016042"}


id: MOD:00045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to pros-phospho-L-histidine (N-pi-phospho-L-histidine, 3'-phospho-L-histidine).","definition_xrefs":["PubMed:7803390","PubMed:5642389","PubMed:1549615","RESID:AA0036","PubMed:6692818","PubMed:7669763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated L-histidine","termid":"MOD:00890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"3'-phospho-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-phospho-L-histidine","type":"exact"},{"name":"ACT_SITE Pros-phosphohistidine intermediate","type":"exact"},{"name":"MOD_RES Pros-phosphohistidine","type":"exact"},{"name":"N(pi)-phosphohistidine","type":"exact"},{"name":"N3-phosphonohistidine","type":"exact"},{"name":"ND1-phosphonohistidine","type":"exact"},{"name":"NpPHis","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"histidine-1-phosphate","type":"related"},{"name":"histidine-N(delta)-phosphate","type":"exact"},{"name":"histidine-N3'-phosphate","type":"exact"},{"name":"pros-phosphohistidine","type":"exact"}],"termid":"MOD:00045"}


id: PBO:0056863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence A","termid":"PBO:0056863"}


id: MONDO:0100298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abdominal wall malformation","termid":"MONDO:0100298","xrefs":{"Monarch":{"xref_id":"0100298"}}}


id: GO:0009406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete virulence (obsolete GO:0009406)","synonyms":[{"name":"virulence","type":"exact"}],"termid":"GO:0009406"}


id: FYPO:0000059
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id: PBO:0084035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell surface glycoprotein (flocculin); required for pseudohyphal and invasive growth, flocculation, and biofilm formation; major determinant of colony morphology; QTL that controls chronological life span; carries intragenic tandem repeats that are expanded in different strains; required for formation of fibrous interconnections between cells; role in co-flocculation with other yeast species; cleaved and shed from cells, contributing to their surface properties","termid":"PBO:0084035"}


id: FYPO:0004924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal telomere tethering at nuclear periphery","synonyms":[{"name":"normal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere anchoring at nuclear periphery","type":"exact"},{"name":"normal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0004924"}


id: PBO:0053068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"layilin","termid":"PBO:0053068"}


id: MONDO:0030887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that is characterized by early-onset severe dilated cardiomyopathy that progresses rapidly to heart failure in the neonatal period without evidence of intervening hypertrophy and that has material basis in homozygous or compound heterozygous mutation in the LMOD2 gene on chromosome 7q31.","definition_xrefs":["DOID:0081163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2G","secondary_identifiers":["UMLS:C5676995","OMIM:619897","MEDGEN:1801983"],"synonyms":[{"name":"CMD2G","type":"exact"},{"name":"cardiomyopathy, dilated, 2G","type":"exact"}],"termid":"MONDO:0030887","xrefs":{"Monarch":{"xref_id":"0030887"}}}


id: PBO:0068598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 49, pseudogene","termid":"PBO:0068598"}


id: PR:Q9HGP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.03 gene.","definition_xrefs":["UniProtKB:Q9HGP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C212.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.03","synonyms":[{"name":"Spom972h-SPAC212.03","type":"exact"}],"termid":"PR:Q9HGP9"}


id: MONDO:0957542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 22, adult-onset","secondary_identifiers":["OMIM:620456","DOID:0060967","UMLS:C5830658","MEDGEN:1841294"],"termid":"MONDO:0957542","xrefs":{"Monarch":{"xref_id":"0957542"}}}


id: PBO:0111058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, Human BICC1 ortholog, implicated in RNA metabolism","termid":"PBO:0111058"}


id: PBO:0063007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 1","termid":"PBO:0063007"}


id: PBO:0110366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR pathway substrate 8, signaling adaptor","termid":"PBO:0110366"}


id: FYPO:0002886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heavy metal stress. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription during cellular response to heavy metal stress","synonyms":[{"name":"normal transcription during cellular response to heavy metal stress during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heavy metal stress during vegetative growth","type":"exact"},{"name":"normal transcription in response to heavy metal stress","type":"exact"}],"termid":"FYPO:0002886"}


id: GO:0032607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-alpha production","secondary_identifiers":["GO:0045349","GO:0072642"],"synonyms":[{"name":"IFN-alpha production","type":"exact"},{"name":"IFNA production","type":"exact"},{"name":"interferon-alpha biosynthetic process","type":"narrow"},{"name":"interferon-alpha secretion","type":"narrow"}],"termid":"GO:0032607"}


id: GO:0140033
data:
  {"annotated_genes":["SJAG_00591","SJAG_02625","SJAG_02500","SJAG_02701","SJAG_05252","SJAG_00837"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79346,80519,75648,77288,71072,79173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon acetylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"acetylation-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140033","terms_by_termid":{"GO:0070577":null}}


id: GO:0044092
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95624,105474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops or reduces the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of molecular function","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044092","terms_by_termid":{"GO:1904530":null}}


id: GO:1903229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthosine.","definition_xrefs":["GOC:TermGenie","PMID:7559336","PMID:7007809","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"},{"relation_name":"is_a","term_name":"xanthosine metabolic process","termid":"GO:1903227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"xanthosine biosynthetic process","synonyms":[{"name":"xanthosine anabolism","type":"exact"},{"name":"xanthosine biosynthesis","type":"exact"},{"name":"xanthosine formation","type":"exact"},{"name":"xanthosine synthesis","type":"exact"}],"termid":"GO:1903229"}


id: FYPO:0002463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved septated vegetative cell","termid":"FYPO:0002282"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002481"],"synonyms":[{"name":"inviable branched curved cell","type":"exact"},{"name":"inviable branched, curved cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved septated cell","type":"exact"},{"name":"inviable branched, curved vegetative cell","type":"exact"},{"name":"inviable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, curved septated cell","type":"exact"},{"name":"inviable branched, long, curved, septated cell","type":"exact"},{"name":"inviable curved branched cell","type":"exact"},{"name":"inviable curved branched elongated cell","type":"exact"},{"name":"inviable elongated branched curved cell","type":"exact"},{"name":"lethal; branched, curved, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002463"}


id: MONDO:0007930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Bernard-Soulier syndrome characterized by autosomal dominant inheritance of mild to moderate bleeding tendency, thrombocytopenia, and an increased mean platelet size that has material basis in heterozygous mutations in the GP1BA gene on chromosome 17p.","definition_xrefs":["PMID:1730088","DOID:0111059","PMID:11222377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bernard-Soulier syndrome","termid":"MONDO:0009276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Bernard-Soulier syndrome, type A2, autosomal dominant","secondary_identifiers":["GARD:15082","MEDGEN:478706","OMIM:153670","UMLS:C3277076"],"synonyms":[{"name":"BSSA2","type":"exact"},{"name":"Bernard-Soulier syndrome type A2","type":"related"},{"name":"Bernard-Soulier syndrome, type A2 (dominant)","type":"exact"},{"name":"Bernard-Soulier syndrome, type A2, autosomal dominant","type":"exact"}],"termid":"MONDO:0007930","xrefs":{"Monarch":{"xref_id":"0007930"}}}


id: MONDO:1012545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choroid plexus tumour, non-human animal","termid":"MONDO:1011825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus tumour, dog","secondary_identifiers":["OMIA:002403-9615"],"termid":"MONDO:1012545","xrefs":{"Monarch":{"xref_id":"1012545"}}}


id: PBO:0074185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 6","termid":"PBO:0074185"}


id: PBO:0077820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK divergent transcript","termid":"PBO:0077820"}


id: PBO:0090267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase Pgk1","termid":"PBO:0090267"}


id: MONDO:0037003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A phyllodes tumor with sarcomatous stroma. The sarcomatous component is usually of the fibrosarcomatous type. Liposarcomatous, chondrosarcomatous, osteosarcomatous, or rhabdomyosarcomatous differentiation may also occur in the stroma. It may recur and metastasize following surgical resection. The lung and skeleton are the anatomic sites most frequently involved by metastases.","definition_xrefs":["NCIT:C4275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllodes tumor","termid":"MONDO:0005078"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant phyllodes tumor","secondary_identifiers":["UMLS:C0600066","ICDO:9020/3","MEDGEN:109372"],"synonyms":[{"name":"malignant cystosarcoma phyllodes","type":"exact"},{"name":"malignant phyllodes neoplasm","type":"exact"},{"name":"malignant phyllodes tumor","type":"exact"},{"name":"phyllodes tumor, malignant","type":"exact"}],"termid":"MONDO:0037003","xrefs":{"Monarch":{"xref_id":"0037003"}}}


id: PATO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"wet","termid":"PATO:0001823"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased wetness","termid":"PATO:0001825"}


id: GO:1903354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of distal tip cell migration.","definition_xrefs":["GOC:mm2","PMID:24968003","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"distal tip cell migration","termid":"GO:0097628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of distal tip cell migration","termid":"GO:1903354"}


id: PBO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member A","termid":"PBO:0046902"}


id: PBO:0109128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, EGF-CFC family member 3","termid":"PBO:0109128"}


id: GO:0103071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA = formyl-CoA + a 2-methyl branched 2,3,4-saturated fatty aldehyde.","definition_xrefs":["EC:4.1.-.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA lyase activity (obsolete GO:0103071)","termid":"GO:0103071"}


id: PBO:0029981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029981"}


id: PBO:0076033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK32A antisense RNA 1","termid":"PBO:0076033"}


id: MONDO:0024507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated aniridia","termid":"MONDO:0007119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"aniridia 1","secondary_identifiers":["MEDGEN:576337","DOID:0070532","OMIM:106210","SCTID:253231007","UMLS:C0344542"],"synonyms":[{"name":"AN1","type":"exact"},{"name":"aniridia","type":"broad"},{"name":"aniridia 1","type":"exact"},{"name":"aniridia II","type":"related"},{"name":"aniridia II, formerly","type":"related"},{"name":"cataract with late-onset corneal dystrophy","type":"exact"},{"name":"cataract, congenital, with late-onset corneal dystrophy","type":"related"}],"termid":"MONDO:0024507","xrefs":{"Monarch":{"xref_id":"0024507"}}}


id: PBO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3A","termid":"PBO:0047738"}


id: GO:0070057
data:
  {"annotated_genes":["SJAG_04080","SJAG_03536","SJAG_00405"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103234,105611,118832],"is_not":false,"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane to which the spindle pole body (SPB) is anchored; the prospore membrane extends from the SPB attachment site to surround the spore nucleus.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005628"}],"interesting_parent_ids":["GO:0005628","GO:0005575"],"is_obsolete":false,"name":"prospore membrane spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane SPB attachment site","type":"exact"},{"name":"forespore membrane spindle pole body attachment site","type":"exact"},{"name":"prospore membrane SPB attachment site","type":"exact"}],"termid":"GO:0070057","terms_by_termid":{"GO:0070057":null}}


id: GO:0019787
data:
  {"annotated_genes":["SJAG_04783","SJAG_01854","SJAG_00209","SJAG_03006","SJAG_04619","SJAG_01253","SJAG_01900","SJAG_00188","SJAG_00855","SJAG_05022","SJAG_04573","SJAG_01507","SJAG_05236","SJAG_02308","SJAG_04612","SJAG_03970","SJAG_01593","SJAG_00300","SJAG_03618","SJAG_01535","SJAG_03831","SJAG_00727","SJAG_05323","SJAG_02746","SJAG_01533","SJAG_01212","SJAG_02851","SJAG_04309","SJAG_01561","SJAG_00173","SJAG_01018","SJAG_01776","SJAG_02918","SJAG_02521","SJAG_02652","SJAG_02603","SJAG_03250","SJAG_02082","SJAG_03175","SJAG_03968","SJAG_03613","SJAG_05264","SJAG_02685","SJAG_04915","SJAG_03324","SJAG_00475","SJAG_04990","SJAG_03112","SJAG_02575","SJAG_04151","SJAG_01251","SJAG_01772","SJAG_02415","SJAG_03136","SJAG_06309","SJAG_03191","SJAG_00208","SJAG_02668","SJAG_02169","SJAG_05340","SJAG_00509","SJAG_05274","SJAG_03657","SJAG_04600","SJAG_03005","SJAG_00552","SJAG_00111","SJAG_02347","SJAG_00561","SJAG_04429","SJAG_03615","SJAG_03860","SJAG_00435","SJAG_04857","SJAG_04966","SJAG_00293","SJAG_01679","SJAG_00500","SJAG_01637","SJAG_01992","SJAG_00341","SJAG_02319","SJAG_00819","SJAG_00604","SJAG_01360","SJAG_02299","SJAG_03387","SJAG_00931","SJAG_01165","SJAG_03883","SJAG_02371"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061651"},{"annotations":[79091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141046"},{"annotations":[110083,72661,110589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019776"},{"annotations":[119147,116513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[94688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[118696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"},{"annotations":[104797,76188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[104678,72734,72842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"},{"annotations":[65303,114578,78383,88356,74766,117085,77879,102584,88513,71704,88140,73826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[66057,88653,88357,98863,101632,117002,71872,76588,79496,107273,103726,105566,108320,113126,64804,103343,99721,100581,117543,77835,110280,72216,72324,73519,79020,76967,88367,63209,80351,75877,75628,114631,90063,73322,97116,74734,117503,118739,65981,73930,112397,73149,90544,69615,104679,74526,113705,91068,74523,61443,79664,78570,88978,117003,79064,103741,77800,58271,75709,109951,90130,93914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[105202,113944,107510,91845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061659"},{"annotations":[71465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004842"},{"annotations":[75169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin-like from one protein to another via the reaction X-ULP + Y = Y-ULP + X, where both X-ULP and Y-ULP are covalent linkages. 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id: GO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear inner membrane (obsolete GO:0005639)","synonyms":[{"name":"integral to nuclear inner membrane","type":"narrow"}],"termid":"GO:0005639"}


id: MONDO:1010495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, rabbit","secondary_identifiers":["OMIA:001041-9986"],"termid":"MONDO:1010495","xrefs":{"Monarch":{"xref_id":"1010495"}}}


id: PBO:0075912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 4","termid":"PBO:0075912"}


id: GO:0001965
data:
  {"annotated_genes":["SJAG_02027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72707],"is_not":false,"summary":null,"term":"GO:0001965"}]},"cv_name":"molecular_function","definition":"Binding to a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"G-protein alpha-subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-alpha protein subunit binding","type":"exact"}],"termid":"GO:0001965","terms_by_termid":{"GO:0001965":null}}


id: FYPO:0003113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium nitroprusside than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to sodium nitroprusside","synonyms":[{"name":"resistance to sodium nitroprusside during mitotic cell cycle","type":"related"},{"name":"resistance to sodium nitroprusside during vegetative growth","type":"exact"},{"name":"resistant to sodium nitroprusside","type":"exact"}],"termid":"FYPO:0003113"}


id: PBO:0059198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X5, pseudogene","termid":"PBO:0059198"}


id: GO:0046778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that interferes with the processing of mRNA in the host cell.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by virus of host mRNA processing (obsolete GO:0046778)","synonyms":[{"name":"viral perturbation of host mRNA processing","type":"exact"}],"termid":"GO:0046778"}


id: GO:0050592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Z)-(4-hydroxyphenyl)acetaldehyde oxime + H+ + NADPH + O2 = (S)-4-hydroxymandelonitrile + 2 H2O + NADP+.","definition_xrefs":["EC:1.14.14.37","RHEA:18401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde oxime monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05728","MetaCyc:1.14.13.68-RXN"],"synonyms":[{"name":"(Z)-4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"4-hydroxybenzeneacetaldehyde oxime monooxygenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"CYP71E1 activity","type":"narrow"},{"name":"NADPH-cytochrome P450 reductase (CYP71E1)","type":"related"},{"name":"cytochrome P450-II-dependent monooxygenase activity","type":"narrow"},{"name":"cytochrome P450II-dependent monooxygenase activity","type":"related"}],"termid":"GO:0050592"}


id: PBO:0041009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORCS8 pseudogene 1","termid":"PBO:0041009"}


id: MONDO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of cellular proliferation (obsolete MONDO:0002001)","termid":"MONDO:0002001","xrefs":{"Monarch":{"xref_id":"0002001"}}}


id: MONDO:0011008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip/palate - intestinal malrotation - cardiopathy is a multiple congenital anomaly syndrome described in 5 patients to date, characterized by flat face, hypertelorism, flat occiput, upward slanting palpebral fissures, cleft palate, micrognathia, short neck, and severe congenital heart defects which were lethal in 3 of the 5 patients reported. Malrotation of the intestine, bilateral clinodactyly, bilobed tongue, short fourth metatarsals and bifid thumbs were reported in individual cases. There have been no further descriptions in the literature since 1997.","definition_xrefs":["Orphanet:2001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip/palate-intestinal malrotation-cardiopathy syndrome","secondary_identifiers":["OMIM:601165","GARD:3430","UMLS:C2931750","MEDGEN:444135","SCTID:719456001","MESH:C538160"],"synonyms":[{"name":"McPherson Clemens syndrome","type":"related"},{"name":"McPherson-Clemens syndrome","type":"exact"},{"name":"cleft LIP/palate with characteristic facies, intestinal malrotation, and lethal congenital heart disease","type":"related"},{"name":"cleft lip, cleft palate, characteristic facies, intestinal malrotation, and lethal congenital heart disease","type":"related"}],"termid":"MONDO:0011008","xrefs":{"Monarch":{"xref_id":"0011008"}}}


id: MONDO:1030004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare clinical disorder characterized by at least three recurrent episodes of meningitis associated with spontaneous recovery with or without antiviral therapy. Herpes simplex virus type 2 has frequently been implicated in the setting of this illness. RBLM is rare with prevalence rates estimated at 2 per 100,000 persons.","definition_xrefs":["PMID:36304598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral meningitis","termid":"MONDO:0007015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mollaret’s meningitis","synonyms":[{"name":"RBLM","type":"exact"},{"name":"recurrent benign lymphocytic meningitis","type":"exact"}],"termid":"MONDO:1030004","xrefs":{"Monarch":{"xref_id":"1030004"}}}


id: PBO:0029267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0029267"}


id: GO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0242"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-serine thiazolecarboxylic acid (obsolete GO:0018138)","termid":"GO:0018138"}


id: PBO:0027670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_assembly_checkpoint_override","termid":"PBO:0027670"}


id: MONDO:0006571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inflammatory disease characterized by shiny, flat-topped, usually flesh-colored micropapules no larger than the head of a pin. Lesions are localized in the early stages, found chiefly on the lower abdomen, penis, and inner surface of the thighs. Distribution may become generalized as the disease progresses.","definition_xrefs":["MESH:D017513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen disease","termid":"MONDO:0006570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen nitidus","secondary_identifiers":["ICD9:697.1","UMLS:C0162849","MEDGEN:58196","icd11.foundation:525392264","SCTID:41890004","DOID:8573","ICD10CM:L44.1","SCTID:25147002","Wikipedia:Lichen_nitidus"],"synonyms":[{"name":"Pinkus' disease","type":"exact"}],"termid":"MONDO:0006571","xrefs":{"Monarch":{"xref_id":"0006571"}}}


id: PBO:0087026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L12B; rpl12a rpl12b double mutant exhibits slow growth and slow translation; homologous to mammalian ribosomal protein L12 and bacterial L11; RPL12B has a paralog, RPL12A, that arose from the whole genome duplication","termid":"PBO:0087026"}


id: GO:0046118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 7-methylguanosine, a modified nucleoside that forms a cap at the 5'-terminus of eukaryotic mRNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"7-methylguanosine metabolic process","termid":"GO:0008618"},{"relation_name":"is_a","term_name":"guanosine-containing compound biosynthetic process","termid":"GO:1901070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"7-methylguanosine biosynthetic process","synonyms":[{"name":"7-methylguanosine anabolism","type":"exact"},{"name":"7-methylguanosine biosynthesis","type":"exact"},{"name":"7-methylguanosine formation","type":"exact"},{"name":"7-methylguanosine synthesis","type":"exact"}],"termid":"GO:0046118"}


id: MONDO:1011677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of mammary gland, non-human animal","secondary_identifiers":["OMIA:000529"],"termid":"MONDO:1011677","xrefs":{"Monarch":{"xref_id":"1011677"}}}


id: MONDO:0021026
data:
  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instance of epidermal appendage anomaly that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00104":null,"SJAG_00159":null,"SJAG_00566":null,"SJAG_00612":null,"SJAG_00993":null,"SJAG_00995":null,"SJAG_01159":null,"SJAG_01181":null,"SJAG_01207":null,"SJAG_01235":null,"SJAG_01378":null,"SJAG_01416":null,"SJAG_01797":null,"SJAG_01836":null,"SJAG_02342":null,"SJAG_03112":null,"SJAG_03206":null,"SJAG_03249":null,"SJAG_03453":null,"SJAG_04110":null,"SJAG_04266":null,"SJAG_04454":null,"SJAG_04565":null,"SJAG_04627":null,"SJAG_04754":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary epidermal appendage 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id: GO:0009186
data:
  {"annotated_genes":["SJAG_04665","SJAG_04657","SJAG_02874","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92776,95820,107574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[71370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[71369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009186","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: PBO:0051227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-20-1 (pseudogene)","termid":"PBO:0051227"}


id: PBO:0078644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-2","termid":"PBO:0078644"}


id: PBO:0056584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator 1","termid":"PBO:0056584"}


id: PBO:0012889
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quant_gene_ex_cell_distribution","termid":"PBO:0012889"}


id: PBO:0047829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 divergent transcript","termid":"PBO:0047829"}


id: MONDO:1010802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly, non-human animal","termid":"MONDO:1010156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, pig","secondary_identifiers":["OMIA:000146-9823"],"termid":"MONDO:1010802","xrefs":{"Monarch":{"xref_id":"1010802"}}}


id: MONDO:0020710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the amnion.","definition_xrefs":["NCIT:C50459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of extraembryonic membrane","termid":"MONDO:0045013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amnionitis","secondary_identifiers":["ICD9:658.40","SCTID:10573002","UMLS:C0002631","MEDGEN:1490"],"synonyms":[{"name":"Infection of amniotic cavity","type":"related"},{"name":"amnionitides","type":"related"},{"name":"amnionitis","type":"exact"},{"name":"amniotic cavity infection","type":"related"},{"name":"amniotic infection syndrome","type":"narrow"},{"name":"infection of amniotic cavity","type":"exact"}],"termid":"MONDO:0020710","xrefs":{"Monarch":{"xref_id":"0020710"}}}


id: MONDO:0011240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polymalfomative syndrome characterized by cutaneous capillary malformations, megalencephaly, cortical brain malformations (most distinctively polymicrogyria), abnormalities of somatic growth with body and brain asymmetry, developmental delay, and characteristic facial dysmorphism.","definition_xrefs":["Orphanet:60040"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0018719)","termid":"MONDO:0018719"},{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"PIK3CA-related overgrowth spectrum","termid":"MONDO:1040002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"megalencephaly-capillary malformation-polymicrogyria syndrome","secondary_identifiers":["GARD:6950","OMIM:602501","ICD9:759.89","MESH:C536142","MEDGEN:355421","NANDO:2200823","NORD:1423","SCTID:703370002","UMLS:C1865285"],"synonyms":[{"name":"M-CM","type":"related"},{"name":"M-CMTC","type":"related"},{"name":"MCAP","type":"exact"},{"name":"MCM","type":"exact"},{"name":"MCMTC","type":"exact"},{"name":"Megalencephaly-Capillary Malformation","type":"exact"},{"name":"macrocephaly cutis marmorata telangiectatica congenita","type":"related"},{"name":"macrocephaly-capillary malformation","type":"related"},{"name":"macrocephaly-capillary malformation syndrome","type":"exact"},{"name":"macrocephaly-cutis marmorata telangiectatica congenita","type":"related"},{"name":"macrocephaly-cutis marmorata telangiectatica congenita syndrome","type":"exact"},{"name":"megalencephaly cutis marmorata telangiectatica congenita","type":"related"},{"name":"megalencephaly-capillary malformation syndrome","type":"exact"},{"name":"megalencephaly-capillary malformation-polymicrogyria syndrome","type":"exact"},{"name":"megalencephaly-capillary malformation-polymicrogyria syndrome, somatic","type":"exact"},{"name":"megalencephaly-cutis marmorata telangiectatica congenita","type":"related"},{"name":"megalencephaly-cutis marmorata telangiectatica congenita syndrome","type":"exact"},{"name":"megalocephaly cutis marmorata telangiectatica congenita","type":"related"}],"termid":"MONDO:0011240","xrefs":{"Monarch":{"xref_id":"0011240"}}}


id: PBO:0043751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 6","termid":"PBO:0043751"}


id: FYPO:0004998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of horsetail movement is shorter than normal. Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal horsetail movement","termid":"FYPO:0000197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of horsetail movement","synonyms":[{"name":"decreased duration of dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"decreased duration of horsetail nuclear movement","type":"exact"},{"name":"reduced duration of horsetail movement","type":"exact"}],"termid":"FYPO:0004998"}


id: GO:0048811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc.","definition_xrefs":["PMID:11494318","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia morphogenesis","termid":"GO:0048809"},{"relation_name":"part_of","term_name":"male analia development","termid":"GO:0045496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia morphogenesis","termid":"GO:0048811"}


id: GO:0097251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene B4 biosynthetic process","synonyms":[{"name":"LTB4 anabolism","type":"exact"},{"name":"LTB4 biosynthesis","type":"exact"},{"name":"LTB4 formation","type":"exact"},{"name":"LTB4 synthesis","type":"exact"},{"name":"leukotriene B4 anabolism","type":"exact"},{"name":"leukotriene B4 biosynthesis","type":"exact"},{"name":"leukotriene B4 formation","type":"exact"},{"name":"leukotriene B4 synthesis","type":"exact"}],"termid":"GO:0097251"}


id: MONDO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with true tapeworms of the helminth subclass Cestoda.","definition_xrefs":["MESH:D002590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cestode infectious disease","secondary_identifiers":["ICD9:123.8","ICD9:123.9","SCTID:86133004"],"synonyms":[{"name":"Bertielliases","type":"related"},{"name":"Bertielliasis","type":"related"},{"name":"Cenuriases","type":"related"},{"name":"Cenuriasis","type":"related"},{"name":"Cestoda caused disease or disorder","type":"exact"},{"name":"Cestoda disease or disorder","type":"exact"},{"name":"Cestoda infectious disease","type":"exact"},{"name":"Cestodiasis","type":"related"},{"name":"Cestodosis","type":"related"},{"name":"Coenuriases","type":"related"},{"name":"Coenuriasis","type":"related"},{"name":"Dipylidiases","type":"related"},{"name":"Dipylidiasis","type":"related"},{"name":"Raillietiniases","type":"related"},{"name":"Raillietiniasis","type":"related"},{"name":"cestode infection","type":"exact"},{"name":"cestode infestation","type":"related"},{"name":"disease due to Cestoda","type":"related"},{"name":"infection, cestode","type":"related"},{"name":"infection, tapeworm","type":"related"},{"name":"infections, cestode","type":"related"},{"name":"infections, tapeworm","type":"related"},{"name":"tapeworm infection","type":"related"},{"name":"tapeworm infections","type":"related"}],"termid":"MONDO:0042488","xrefs":{"Monarch":{"xref_id":"0042488"}}}


id: GO:0090335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell differentiation","termid":"GO:0045598"},{"relation_name":"regulates","term_name":"brown fat cell differentiation","termid":"GO:0050873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brown fat cell differentiation","secondary_identifiers":["Reactome:R-HSA-9843743"],"termid":"GO:0090335"}


id: GO:0006177
data:
  {"annotated_genes":["SJAG_01298","SJAG_00964","SJAG_04634","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59502,63137,75082],"is_not":false,"summary":null,"term":"GO:0006177"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP anabolism","type":"exact"},{"name":"GMP biosynthesis","type":"exact"},{"name":"GMP formation","type":"exact"},{"name":"GMP synthesis","type":"exact"}],"termid":"GO:0006177","terms_by_termid":{"GO:0006177":null,"GO:0032263":null}}


id: PBO:0108511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex subunit Sds3","termid":"PBO:0108511"}


id: GO:1901749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene D4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"leukotriene D4 catabolic process","synonyms":[{"name":"leukotriene D4 breakdown","type":"exact"},{"name":"leukotriene D4 catabolism","type":"exact"},{"name":"leukotriene D4 degradation","type":"exact"}],"termid":"GO:1901749"}


id: FYPO:0004484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to prospore membrane","termid":"FYPO:0000677"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to prospore membrane","synonyms":[{"name":"abolished protein localisation to prospore membrane","type":"exact"},{"name":"abolished protein localization to forespore membrane","type":"exact"},{"name":"protein localization to prospore membrane abolished","type":"exact"}],"termid":"FYPO:0004484"}


id: PBO:0111815
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0111815"}


id: GO:0032137
data:
  {"annotated_genes":["SJAG_02748","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106400,116743],"is_not":false,"summary":null,"term":"GO:0032137"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/T mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"guanine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G/T mispair binding","type":"exact"},{"name":"T/G mispair binding","type":"exact"},{"name":"thymine/guanine mispair binding","type":"exact"}],"termid":"GO:0032137","terms_by_termid":{"GO:0032137":null}}


id: MONDO:0018990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary blastoma (obsolete MONDO:0018990)","termid":"MONDO:0018990","xrefs":{"Monarch":{"xref_id":"0018990"}}}


id: GO:0004226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidyl-Gly-Xaa + H2O = peptidyl-Gly + Xaa.","definition_xrefs":["EC:3.4.17.4"],"gene_count":0,"genotype_count":0,"name":"obsolete Gly-X carboxypeptidase activity (obsolete GO:0004226)","synonyms":[{"name":"Gly-X carboxypeptidase activity","type":"exact"},{"name":"Gly-Xaa carboxypeptidase activity","type":"related"},{"name":"carboxypeptidase S activity","type":"related"},{"name":"carboxypeptidase a","type":"related"},{"name":"glycine carboxypeptidase activity","type":"related"},{"name":"peptidase alpha","type":"related"},{"name":"yeast carboxypeptidase activity","type":"related"}],"termid":"GO:0004226"}


id: PBO:0070303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 9","termid":"PBO:0070303"}


id: PBO:0066173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 6","termid":"PBO:0066173"}


id: GO:0050152
data:
  {"annotated_genes":["SJAG_02276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72754],"is_not":false,"summary":null,"term":"GO:0050152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a monoamide of a dicarboxylic acid + H2O = a dicarboxylate + NH3.","definition_xrefs":["MetaCyc:OMEGA-AMIDASE-RXN","EC:3.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"omega-amidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:11716"],"synonyms":[{"name":"alpha-keto acid-omega-amidase activity","type":"related"},{"name":"omega-amidodicarboxylate amidohydrolase activity","type":"related"},{"name":"w-amidase activity","type":"exact"}],"termid":"GO:0050152","terms_by_termid":{"GO:0050152":null}}


id: PBO:0068680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 61, pseudogene","termid":"PBO:0068680"}


id: RO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and an anatomical entity such that the process contributes to the act of creating the structural organization of the anatomical entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_structural_organization_of","termid":"RO:0002355"}


id: PBO:0113518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin binding protein involved in endosomal protein sorting; K48-, K63-Ub chain binding protein that preferentially binds K63-linked chains in vitro; subunit of the ESCRT-0 complex that binds to ubiquitin via two ubiquitin-interacting motifs (UIMs) and is involved in sorting cargo into multivesicular bodies; required for recycling Golgi proteins, forming lumenal membranes and sorting ubiquitinated proteins destined for degradation","termid":"PBO:0113518"}


id: PBO:0039045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 5","termid":"PBO:0039045"}


id: PBO:0039884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 1","termid":"PBO:0039884"}


id: PBO:0034256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_killed_by","termid":"PBO:0034256"}


id: PBO:0082039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxyglucose-6-phosphate phosphatase; member of a family of low molecular weight phosphatases, induced by oxidative and osmotic stress, confers 2-deoxyglucose resistance when overexpressed; DOG2 has a paralog, DOG1, that arose from a single-locus duplication; the last half of DOG1 and DOG2 are subject to gene conversions among S. cerevisiae, S. paradoxus, and S. mikatae","termid":"PBO:0082039"}


id: GO:0160193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of L-lactate dehydrogenase.","definition_xrefs":["PMID:33406399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0003674","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"L-lactate dehydrogenase inhibitor activity","termid":"GO:0160193"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["PMID:21666597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: GO:0101010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of existing pulmonary blood vessels.","definition_xrefs":["GOC:mec"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary blood vessel remodeling","synonyms":[{"name":"pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:0101010"}


id: PBO:0013069
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complement S. cerevisiae CDC28 when introns removed","termid":"PBO:0013069"}


id: MONDO:0018490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cono-spondylar dysplasia is a rare genetic primary bone dysplasia disorder characterized by early-onset severe lumbar kyphosis, marked brachydactyly and irregular, pronounced cone epiphyses of the metacarpals and phalanges. Additional reported features include developmental delay, intellectual disability, hypotonia, epileptic seizures and mild facial dysmorphism (incl. long and thin or square-shaped face, slight mid-face hypoplasia, hypertelorism, epicanthic folds, low-set ears, anteverted nostrils). Radiographic findings also reveal hypoplasia of iliac wings and anterior defect of vertebral bodies.","definition_xrefs":["Orphanet:420794"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cono-spondylar dysplasia","secondary_identifiers":["UMLS:C4707860","MEDGEN:1638945","SCTID:766874001","GARD:21750"],"synonyms":[{"name":"short stature-kyphosis-hypoplasia of basal ilia-cone epiphyses-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0018490","xrefs":{"Monarch":{"xref_id":"0018490"}}}


id: PBO:0083331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER137C","termid":"PBO:0083331"}


id: GO:0071051
data:
  {"annotated_genes":["SJAG_01521","SJAG_01191","SJAG_04321","SJAG_03179","SJAG_03745","SJAG_00854","SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71247,73587,74723,75436,76678,78054,115749],"is_not":false,"summary":null,"term":"GO:0071051"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a snoRNA molecule linked to prior polyadenylation of the 3'-end of the precursor snoRNA.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:18951092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04153":null,"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074","GO:0010467"],"is_obsolete":false,"name":"poly(A)-dependent snoRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyadenylation-dependent snoRNA 3'-end processing","type":"exact"},{"name":"sno(s)RNA polyadenylation","type":"narrow"}],"termid":"GO:0071051","terms_by_termid":{"GO:0071051":null}}


id: GO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX-serine (position 139) + ATP = histone H2AX-phosphoserine (position 139) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 139 of histone variant H2AX.","definition_xrefs":["PMID:11893489","PMID:16061642","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2AX kinase activity","termid":"GO:0141003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016740","GO:0004672","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"histone H2AXS139 kinase activity","synonyms":[{"name":"histone H2AS139 kinase activity","type":"related"},{"name":"histone kinase activity (H2A-S139 specific)","type":"related"},{"name":"histone kinase activity (H2A.x-S139 specific)","type":"narrow"}],"termid":"GO:0035979"}


id: PBO:0030744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030744"}


id: PBO:0086639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YPL067C is not an essential gene","termid":"PBO:0086639"}


id: MONDO:0008103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noduli Cutanei, multiple, with urinary tract abnormalities","secondary_identifiers":["UMLS:C1834143","OMIM:163850","MESH:C563512","MEDGEN:371746"],"synonyms":[{"name":"noduli Cutanei, multiple, with urinary tract abnormalities","type":"exact"}],"termid":"MONDO:0008103","xrefs":{"Monarch":{"xref_id":"0008103"}}}


id: MONDO:0015826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spondylocostal dysostosis is a very rare and mild form of spondylocostal dysostosis characterized by vertebral and costal segmentation defects, often with a reduction in the number of ribs.","definition_xrefs":["Orphanet:1797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylocostal dysostosis","termid":"MONDO:0000359"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant spondylocostal dysostosis","secondary_identifiers":["SCTID:716232002","MEDGEN:902919","UMLS:C4274761","GARD:12806"],"synonyms":[{"name":"autosomal dominant spondylocostal dysplasia","type":"exact"},{"name":"spondylocostal dysostosis, autosomal dominant","type":"exact"}],"termid":"MONDO:0015826","xrefs":{"Monarch":{"xref_id":"0015826"}}}


id: GO:1904257
data:
  {"annotated_genes":["SJAG_00328","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75094,104630],"is_not":false,"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol across the Golgi membrane into the Golgi lumen.","definition_xrefs":["GOC:TermGenie","GO_REF:0000075","PMID:25732056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"zinc ion import into Golgi lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytosol to Golgi apparatus zinc transport","type":"exact"},{"name":"zinc II ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import into Golgi apparatus","type":"exact"},{"name":"zinc ion import into Golgi membrane","type":"related"},{"name":"zinc(2+) import across Golgi membrane","type":"exact"}],"termid":"GO:1904257","terms_by_termid":{"GO:1904257":null}}


id: MOD:01590
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-farnesyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan.","definition_xrefs":["PubMed:18323630","RESID:AA0500","ChEBI:52950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"isoprenylated tryptophan","termid":"MOD:01115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"3'-farnesyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","synonyms":[{"name":"(2S,3aR,8aS)-3a-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]-1,2,3,3a,8,8a-hexahydropyrrolo[2,3-b]indole-2-carboxylic acid","type":"exact"},{"name":"3'-farnesyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","type":"exact"},{"name":"LIPID 3'-farnesyl-2',N2-cyclotryptophan","type":"exact"}],"termid":"MOD:01590"}


id: PR:P40236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hhp2 gene.","definition_xrefs":["UniProtKB:P40236","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog hhp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.12","synonyms":[{"name":"Spom972h-hhp2","type":"exact"}],"termid":"PR:P40236"}


id: PBO:0074284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT3 antisense RNA 1","termid":"PBO:0074284"}


id: MONDO:0957807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgE syndrome 6, autosomal dominant, with recurrent infections","secondary_identifiers":["MEDGEN:1851769","OMIM:620532","UMLS:C5848786"],"termid":"MONDO:0957807","xrefs":{"Monarch":{"xref_id":"0957807"}}}


id: GO:0005525
data:
  {"annotated_genes":["SJAG_00360","SJAG_04666","SJAG_02302","SJAG_02856","SJAG_04343","SJAG_02595","SJAG_03188","SJAG_01558","SJAG_03846","SJAG_04874","SJAG_02601","SJAG_04004","SJAG_01277","SJAG_02353","SJAG_04509","SJAG_00801","SJAG_04375","SJAG_01534","SJAG_02520","SJAG_00430","SJAG_01456","SJAG_03137","SJAG_00983","SJAG_01774","SJAG_02605","SJAG_02233","SJAG_01769","SJAG_02171","SJAG_02292","SJAG_02509","SJAG_01449","SJAG_01358","SJAG_03342","SJAG_03959","SJAG_04862","SJAG_02640","SJAG_02661","SJAG_01789","SJAG_03684","SJAG_00840","SJAG_01695","SJAG_02331","SJAG_00457","SJAG_00231","SJAG_01391","SJAG_04233","SJAG_01438","SJAG_00424","SJAG_02604","SJAG_03461","SJAG_04366","SJAG_03275","SJAG_03915","SJAG_02384","SJAG_02444","SJAG_04940","SJAG_01929","SJAG_00659","SJAG_03453","SJAG_01909","SJAG_01339","SJAG_01215","SJAG_03688","SJAG_02366","SJAG_01851","SJAG_00044","SJAG_01379","SJAG_04351","SJAG_02684","SJAG_03374","SJAG_04003","SJAG_02824","SJAG_02180","SJAG_00466","SJAG_04387","SJAG_00031","SJAG_00906","SJAG_00663","SJAG_00226","SJAG_02656","SJAG_04470","SJAG_00414","SJAG_05030","SJAG_00344","SJAG_03371","SJAG_00968","SJAG_04157","SJAG_01696","SJAG_03072","SJAG_02848","SJAG_00118","SJAG_03732","SJAG_05332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57115,57511,58009,58019,58121,58274,58293,58824,58900,59081,59650,60175,60203,60470,60669,61094,61178,61447,61944,61976,62334,62874,62971,63160,63189,63463,63827,63879,64448,64470,64978,64979,65164,65485,65704,66207,66238,66376,66765,67020,67659,67801,68163,68414,68803,69278,69331,69362,69821,70033,70245,70583,71423,71850,72602,72669,72884,73093,73701,73727,73816,74421,74683,74746,75533,76081,76624,77690,77857,78083,78274,78285,78888,80434,80543,80592,80656,91421,92266,93744,93797,94568,96093,96610,96838,101562,103985,105386,108787,113841,117793,118779,119258],"is_not":false,"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to GTP, guanosine triphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GTP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-167429"],"termid":"GO:0005525","terms_by_termid":{"GO:0005525":null}}


id: PBO:0086802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YCL002C is not an essential gene","termid":"PBO:0086802"}


id: MONDO:0020092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare idiopathic male infertility (obsolete MONDO:0020092)","secondary_identifiers":["Orphanet:98345"],"termid":"MONDO:0020092","xrefs":{"Monarch":{"xref_id":"0020092"}}}


id: GO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein exit from endoplasmic reticulum","synonyms":[{"name":"regulation of protein exit from ER","type":"exact"},{"name":"regulation of protein export from ER","type":"exact"},{"name":"regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070861"}


id: FYPO:0008253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of telomere repeat derived RNA measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:27183912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal telomere repeat region derived RNA level","termid":"FYPO:0008253"}


id: PBO:0062414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 43 pseudogene","termid":"PBO:0062414"}


id: SO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering the exon, at the 3' edge of the intron. A splice_site that is upstream_adjacent_to exon and finishes intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_cis_splice_site","synonyms":[{"name":"3' splice site","type":"related"},{"name":"acceptor","type":"related"},{"name":"acceptor splice site","type":"exact"},{"name":"splice acceptor site","type":"exact"},{"name":"three prime splice site","type":"exact"}],"termid":"SO:0000164"}


id: FYPO:0003004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during vegetative growth","synonyms":[{"name":"increased ROS accumulation during vegetative growth","type":"related"},{"name":"increased cellular ROS accumulation during vegetative growth","type":"related"},{"name":"increased cellular ROS level during vegetative growth","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during vegetative growth","type":"related"},{"name":"increased cellular reactive oxygen species level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003004"}


id: GO:1990919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a proteasome complex and a nuclear inner membrane, to maintain the nuclear membrane localization of the proteasome.","definition_xrefs":["PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"proteasome-nuclear membrane anchor activity","synonyms":[{"name":"nuclear membrane proteasome adaptor","type":"related"},{"name":"nuclear membrane proteasome anchor","type":"exact"},{"name":"nuclear membrane proteasome tether","type":"exact"},{"name":"nuclear membrane proteasome tether activity","type":"exact"},{"name":"nuclear membrane-proteasome anchor activity","type":"exact"},{"name":"nuclear membrane-proteasome tether activity","type":"exact"},{"name":"tethering factor for nuclear proteasome","type":"related"}],"termid":"GO:1990919"}


id: PBO:0071743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 41","termid":"PBO:0071743"}


id: PBO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_organization","termid":"PBO:0031034"}


id: GO:0042873
data:
  {"annotated_genes":["SJAG_04905","SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[90268],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"The process in which aldonate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04905":null,"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"aldonate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aldonate transport","type":"related"}],"termid":"GO:0042873","terms_by_termid":{"GO:0035432":null,"GO:0140270":null}}


id: GO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of binding to single-stranded telomeric DNA.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of single-stranded telomeric DNA binding (obsolete GO:0060380)","synonyms":[{"name":"regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060380"}


id: PBO:0064497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A","termid":"PBO:0064497"}


id: PATO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000497 relative rhythym value (obsolete PATO:0000497)","termid":"PATO:0000497"}


id: GO:0051980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of the iron chelate iron-nicotianamine (Fe-NA) from one side of a membrane to the other.","definition_xrefs":["PMID:20625001","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"iron-nicotianamine transmembrane transporter activity","synonyms":[{"name":"Fe-NA chelate transporter activity","type":"exact"}],"termid":"GO:0051980"}


id: MOD:01101
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because erroneous and apparently redundant to MOD:00111. Remap to MOD:00111.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01101 S-Farnesyl- (obsolete MOD:01101)","termid":"MOD:01101"}


id: GO:0019722
data:
  {"annotated_genes":["SJAG_03486","SJAG_04871","SJAG_03793","SJAG_03799","SJAG_03501","SJAG_01181","SJAG_02429","SJAG_03802","SJAG_04668","SJAG_02858","SJAG_03631","SJAG_03879","SJAG_00296","SJAG_04471","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65668,91555,97989,117682],"is_not":false,"summary":null,"term":"GO:0019722"},{"annotations":[92737,73306,79869,98433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097720"},{"annotations":[116443,116779,118529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"},{"annotations":[116430,101316],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106057"},{"annotations":[111291,102465],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01181":null,"SJAG_02429":null,"SJAG_02858":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03802":null,"SJAG_03879":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Calcium_signaling"],"synonyms":[{"name":"calcium ion signaling","type":"exact"},{"name":"calcium signaling","type":"exact"},{"name":"calcium signalling","type":"exact"},{"name":"calcium-mediated signalling","type":"exact"}],"termid":"GO:0019722","terms_by_termid":{"GO:0019722":null,"GO:0050850":null,"GO:0061762":null,"GO:0097720":null,"GO:0106057":null}}


id: FYPO:0001411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular sulfide level","synonyms":[{"name":"abnormal cellular sulfide accumulation","type":"related"},{"name":"abnormal cellular sulfide level","type":"exact"},{"name":"altered cellular acid labile sulfide level","type":"exact"},{"name":"altered cellular sulfide ion level","type":"exact"},{"name":"altered cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"altered cellular sulfide level during vegetative growth","type":"exact"},{"name":"altered cellular sulphide level","type":"exact"}],"termid":"FYPO:0001411"}


id: PBO:0081973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRSR2 pseudogene 1","termid":"PBO:0081973"}


id: MONDO:0010870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distal myopathy characterized by weakness of the muscles of the anterior compartment of lower limbs, appearing in the fourth to seventh decade of life.","definition_xrefs":["Orphanet:609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"is_a","term_name":"autosomal dominant titinopathy","termid":"MONDO:0100494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"tibial muscular dystrophy","secondary_identifiers":["MEDGEN:333047","OMIM:600334","GARD:13154","SCTID:698846009","UMLS:C1838244","DOID:0111078"],"synonyms":[{"name":"Finnish tibial muscular dystrophy","type":"exact"},{"name":"TMD","type":"exact"},{"name":"Tmd","type":"related"},{"name":"Udd myopathy","type":"exact"},{"name":"Udd type distal myopathy","type":"exact"},{"name":"distal myopathy, Udd type","type":"exact"},{"name":"distal titinopathy","type":"exact"},{"name":"tardive tibial muscular dystrophy","type":"exact"},{"name":"tibial muscular dystrophy, tardive","type":"related"}],"termid":"MONDO:0010870","xrefs":{"Monarch":{"xref_id":"0010870"}}}


id: MONDO:0003375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterus leiomyosarcoma (obsolete MONDO:0003375)","termid":"MONDO:0003375","xrefs":{"Monarch":{"xref_id":"0003375"}}}


id: GO:0051890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardioblast differentiation","termid":"GO:0051890"}


id: GO:0046268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene-4-sulfonate biosynthetic process (obsolete GO:0046268)","synonyms":[{"name":"4-toluenesulfonate biosynthesis","type":"exact"},{"name":"4-toluenesulfonate biosynthetic process","type":"exact"},{"name":"toluene-4-sulfonate anabolism","type":"exact"},{"name":"toluene-4-sulfonate biosynthesis","type":"exact"},{"name":"toluene-4-sulfonate biosynthetic process","type":"exact"},{"name":"toluene-4-sulfonate formation","type":"exact"},{"name":"toluene-4-sulfonate synthesis","type":"exact"},{"name":"toluene-4-sulphonate biosynthesis","type":"exact"},{"name":"toluene-4-sulphonate biosynthetic process","type":"exact"}],"termid":"GO:0046268"}


id: GO:0030581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a symbiont's proteins within a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"symbiont intracellular protein transport in host","secondary_identifiers":["GO:0051708"],"synonyms":[{"name":"host cell protein transport","type":"exact"},{"name":"intracellular protein transport in host","type":"exact"},{"name":"intracellular protein transport in other organism during symbiotic interaction","type":"broad"},{"name":"intracellular protein transport in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0030581"}


id: MONDO:0004053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the Bartholin gland and is characterized by the presence of malignant squamous epithelial cells.","definition_xrefs":["NCIT:C40293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland carcinoma","termid":"MONDO:0002829"},{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bartholin gland squamous cell carcinoma","secondary_identifiers":["DOID:6961","MEDGEN:307249","UMLS:C1511052"],"synonyms":[{"name":"Bartholin's gland squamous cell carcinoma","type":"exact"},{"name":"bartholin gland squamous cell carcinoma","type":"exact"},{"name":"major vestibular gland squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004053","xrefs":{"Monarch":{"xref_id":"0004053"}}}


id: MONDO:0006722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that results from excessive fluoride ingestion during tooth development, resulting in tooth discoloration ranging from white streaks to brown stains and cracks or pits in the tooth enamel.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental fluorosis","secondary_identifiers":["ICD10CM:K00.3","MESH:D009050","UMLS:C0026618","SCTID:30265004","ICD9:520.3","DOID:13711","EFO:1000892","MedDRA:10016819","MEDGEN:44506","NCIT:C85059"],"synonyms":[{"name":"fluorosis","type":"exact"},{"name":"intrinsic enamel discolouration of fluorosis","type":"exact"},{"name":"mottled teeth","type":"exact"},{"name":"mottling of enamel","type":"exact"}],"termid":"MONDO:0006722","xrefs":{"Monarch":{"xref_id":"0006722"}}}


id: PBO:0064570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 2","termid":"PBO:0064570"}


id: GO:0160021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression by which developmental control passes from the maternal genome to the zygotic genome.","definition_xrefs":["PMID:19204068","PMID:32558204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maternal-to-zygotic transition of gene expression","secondary_identifiers":["Reactome:R-HSA-9816359"],"synonyms":[{"name":"MZT","type":"related"}],"termid":"GO:0160021"}


id: MONDO:0008359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radio-renal syndrome is a rare developmental defect during embryogenesis characterized by variable upper limb reduction defects and renal anomalies. Patients typically present absence/hypoplasia of digits, radii and/or ulnae, short stature and mild external ear malformation, as well as kidney agenesis or ectopia. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:3015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radio-renal syndrome","secondary_identifiers":["OMIM:179280","UMLS:C2931146","GARD:224","MESH:C536267","MEDGEN:419723","SCTID:766765009"],"synonyms":[{"name":"radial-renal syndrome","type":"related"},{"name":"radio renal syndrome","type":"related"}],"termid":"MONDO:0008359","xrefs":{"Monarch":{"xref_id":"0008359"}}}


id: GO:1990556
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88753],"is_not":false,"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-isopropylmalate(2-) transmembrane transport","termid":"GO:1902357"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial isopropylmalate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990556","terms_by_termid":{"GO:1990556":null}}


id: PBO:0083939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-adaptin; large subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; involved in vesicle mediated transport","termid":"PBO:0083939"}


id: MONDO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Median cleft of the upper lip and maxilla is a rare, congenital, developmental defect during embryogenesis characterized by a midline vertical cleft through the upper lip and premaillary bone (can also involve the nasal septum and central nervous system). The phenotypic spectrum is highly variable (ranging from a simple vermillion notch to a wide complete cleft) and hypo/hypertelorism, telecanthus, monophthalmia, flat or cleft nose, wide columella, median alveolar cleft and cranial malformations may be associated.","definition_xrefs":["Orphanet:141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"median cleft of the upper lip and maxilla","secondary_identifiers":["GARD:19966","UMLS:C3697381","MEDGEN:784645"],"termid":"MONDO:0015413","xrefs":{"Monarch":{"xref_id":"0015413"}}}


id: PBO:0064049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 83","termid":"PBO:0064049"}


id: PBO:0090204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Alp14","termid":"PBO:0090204"}


id: PBO:0082941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic glyoxalase II; catalyzes the hydrolysis of S-D-lactoylglutathione into glutathione and D-lactate; GLO2 has a paralog, GLO4, that arose from the whole genome duplication","termid":"PBO:0082941"}


id: PBO:0078128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 10","termid":"PBO:0078128"}


id: PBO:0069025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 270, pseudogene","termid":"PBO:0069025"}


id: GO:0043276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Apoptosis triggered by inadequate or inappropriate adherence to substrate e.g. after disruption of the interactions between normal epithelial cells and the extracellular matrix.","definition_xrefs":["PMID:37667281","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anoikis","secondary_identifiers":["Wikipedia:Anoikis"],"synonyms":[{"name":"detachment induced cell death","type":"exact"},{"name":"suspension induced apoptosis","type":"exact"}],"termid":"GO:0043276"}


id: PBO:0045759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme like 1 pseudogene 3","termid":"PBO:0045759"}


id: PBO:0078661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 14-1","termid":"PBO:0078661"}


id: PBO:0057123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 206","termid":"PBO:0057123"}


id: PBO:0109618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144A N-terminal like (pseudogene)","termid":"PBO:0109618"}


id: PBO:0058353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4726","termid":"PBO:0058353"}


id: PBO:0057739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1469","termid":"PBO:0057739"}


id: PATO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being still one contiguous whole but structurally damaged such that in danger of become two or more.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially broken","termid":"PATO:0002082"}


id: PBO:0064822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3D","termid":"PBO:0064822"}


id: PBO:0038851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 19","termid":"PBO:0038851"}


id: PBO:0064683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 19","termid":"PBO:0064683"}


id: GO:0034612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tumor necrosis factor","synonyms":[{"name":"response to TNF","type":"exact"}],"termid":"GO:0034612"}


id: MONDO:1011180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, horse","secondary_identifiers":["OMIA:000755-9796"],"termid":"MONDO:1011180","xrefs":{"Monarch":{"xref_id":"1011180"}}}


id: PBO:0036514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase(predicted)","termid":"PBO:0036514"}


id: GO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of a N-terminal glutamate (and to a lesser extent aspartate) from a peptide.","definition_xrefs":["EC:3.4.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0008233","GO:0016787"],"is_obsolete":false,"name":"glutamyl aminopeptidase activity","secondary_identifiers":["MetaCyc:3.4.11.7-RXN"],"synonyms":[{"name":"Ca2+-activated glutamate aminopeptidase activity","type":"related"},{"name":"L-aspartate aminopeptidase activity","type":"related"},{"name":"aminopeptidase A","type":"related"},{"name":"angiotensinase A","type":"related"},{"name":"angiotensinase A2","type":"related"},{"name":"antigen BP-1/6C3 of mouse B lymphocytes","type":"related"},{"name":"aspartate aminopeptidase activity","type":"related"},{"name":"glutamyl peptidase activity","type":"related"},{"name":"membrane aminopeptidase II","type":"related"}],"termid":"GO:0004230"}


id: PBO:0053224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 4","termid":"PBO:0053224"}


id: GO:0030184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitric oxide, nitrogen monoxide, from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nitric oxide transmembrane transporter activity","termid":"GO:0030184"}


id: GO:2000469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peroxidase activity (obsolete GO:2000469)","synonyms":[{"name":"negative regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of oxyperoxidase activity","type":"exact"},{"name":"negative regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000469"}


id: GO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanol metabolic process","synonyms":[{"name":"methanol metabolism","type":"exact"}],"termid":"GO:0015945"}


id: PBO:0046230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 23","termid":"PBO:0046230"}


id: PBO:0051953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR1 divergent transcript","termid":"PBO:0051953"}


id: PBO:0034310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_muscle_origin","termid":"PBO:0034310"}


id: PBO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase subunit Tad3","termid":"PBO:0001071"}


id: GO:0060627
data:
  {"annotated_genes":["SJAG_04465","SJAG_03581","SJAG_01373","SJAG_03268","SJAG_00661","SJAG_00649","SJAG_04343","SJAG_04052","SJAG_00402","SJAG_03987","SJAG_01166","SJAG_03763","SJAG_04666","SJAG_04509","SJAG_00845","SJAG_02366","SJAG_02684","SJAG_03631","SJAG_00514","SJAG_02419","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[104016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045807"},{"annotations":[100501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[111977,111333,119158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"},{"annotations":[88241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[103250,91302,78696,92763,90212,77860,93051,113673,113543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030100"},{"annotations":[76984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[88244,94186,98724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[113929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00402":null,"SJAG_00514":null,"SJAG_00649":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01166":null,"SJAG_01373":null,"SJAG_02366":null,"SJAG_02419":null,"SJAG_02684":null,"SJAG_03268":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03763":null,"SJAG_03970":null,"SJAG_03987":null,"SJAG_04052":null,"SJAG_04343":null,"SJAG_04465":null,"SJAG_04509":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0060627","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0042997":null,"GO:0045806":null,"GO:0045807":null,"GO:0045921":null,"GO:0060628":null,"GO:2000156":null,"GO:2000369":null,"GO:2001135":null}}


id: MONDO:0017634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior uveitis","termid":"MONDO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"non-infectious anterior uveitis","secondary_identifiers":["Orphanet:306648","GARD:21260","UMLS:C0339317","MEDGEN:573080","SCTID:267619000"],"synonyms":[{"name":"non-infectious iridocyclitis","type":"exact"}],"termid":"MONDO:0017634","xrefs":{"Monarch":{"xref_id":"0017634"}}}


id: MONDO:1011127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular regression syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular regression syndrome, non-human animal","termid":"MONDO:1010281"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular regression syndrome, horse","secondary_identifiers":["OMIA:001535-9796"],"termid":"MONDO:1011127","xrefs":{"Monarch":{"xref_id":"1011127"}}}


id: PR:P08090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21 kDa protein inducing meiosis and sporulation (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.04","synonyms":[{"name":"Spom972h-mei3","type":"exact"}],"termid":"PR:P08090"}


id: PATO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its lacking most of the cellular characteristics which would allow it to be fully differentiated.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poorly differentiated","termid":"PATO:0002106"}


id: MONDO:0958075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare non-dysraphic spinal cord lipoma characterized by being located within the spinal cord. There is no defect in the overlying dura.","definition_xrefs":["Orphanet:645359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord lipoma","termid":"MONDO:0001790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramedullary non-dysraphic spinal cord lipoma","secondary_identifiers":["MEDGEN:1853179","UMLS:C5816716"],"termid":"MONDO:0958075","xrefs":{"Monarch":{"xref_id":"0958075"}}}


id: PBO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase (predicted)","termid":"PBO:0003029"}


id: PATO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of an organ, tissue or cell due to failure to develop from a primordium or precursor cell.","definition_xrefs":["PATOC:PortlandMeetingFeb2015","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"},{"relation_name":"is_a","term_name":"agenesis","termid":"PATO:0002291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic","synonyms":[{"name":"aplasia","type":"exact"},{"name":"undeveloped","type":"exact"}],"termid":"PATO:0001483"}


id: FYPO:0002139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein threonine phosphorylation at Thr-Pro site during vegetative growth (obsolete FYPO:0002139)","synonyms":[{"name":"abolished protein threonine phosphorylation at TP site during vegetative growth","type":"exact"},{"name":"abolished protein threonine phosphorylation at Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"abolished protein threonine phosphorylation at threonine-proline site during vegetative growth","type":"exact"}],"termid":"FYPO:0002139"}


id: GO:0071039
data:
  {"annotated_genes":["SJAG_03745","SJAG_00701","SJAG_02622","SJAG_04360","SJAG_03939","SJAG_01830","SJAG_03984","SJAG_01064"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70682,71244,100097,103307,112165,113063,115678,118418],"is_not":false,"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a cryptic unstable transcript (CUT), initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target CUT.","definition_xrefs":["PMID:16973436","PMID:16973437","PMID:15935759","PMID:18007593","GOC:krc","PMID:18591258","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"CUT catabolic process","termid":"GO:0071034"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent CUT catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent CUT catabolic process","type":"related"}],"termid":"GO:0071039","terms_by_termid":{"GO:0071039":null}}


id: GO:0031852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mu-type opioid receptor.","definition_xrefs":["GOC:sl","GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mu-type opioid receptor binding","synonyms":[{"name":"morphine receptor binding","type":"related"},{"name":"mu-type opioid receptor ligand","type":"narrow"}],"termid":"GO:0031852"}


id: PATO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000219 healing (obsolete PATO:0000219)","termid":"PATO:0000219"}


id: PBO:0074256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 2A1","termid":"PBO:0074256"}


id: MONDO:0007188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary basilar impression (PBI) is a very rare skeletal developmental defect characterized by congenital upward translocation of the upper cervical spine and clivus into the foramen magnum. PBI can be asymptomatic or associated with severe neurological dysfunction.","definition_xrefs":["Orphanet:2285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary basilar invagination","secondary_identifiers":["GARD:1037","MEDGEN:400018","OMIM:109500","MESH:C566226","UMLS:C1862299"],"synonyms":[{"name":"Bull-Nixon syndrome","type":"exact"},{"name":"basilar impression, primary","type":"related"},{"name":"primary basilar impression","type":"related"}],"termid":"MONDO:0007188","xrefs":{"Monarch":{"xref_id":"0007188"}}}


id: PBO:0029891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0029891"}


id: PBO:0083877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase; involved in sulfonate catabolism for use as a sulfur source; contains sequence that resembles a J domain (typified by the E. coli DnaJ protein); induced by sulphur starvation","termid":"PBO:0083877"}


id: GO:0021581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the medulla oblongata. This process pertains to the physical shaping of a rudimentary structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata structural organization","synonyms":[{"name":"medulla oblongata structural organisation","type":"exact"},{"name":"medulla structural maturation","type":"related"},{"name":"myelencephalon structural maturation","type":"related"}],"termid":"GO:0021581"}


id: GO:1904876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:17389648","GOC:BHF_telomere","GO_REF:0000059","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA ligase activity (obsolete GO:1904876)","synonyms":[{"name":"down regulation of DNA ligase activity","type":"exact"},{"name":"down-regulation of DNA ligase activity","type":"exact"},{"name":"downregulation of DNA ligase activity","type":"exact"},{"name":"inhibition of DNA ligase activity","type":"narrow"}],"termid":"GO:1904876"}


id: PBO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ddx27/Drs1 (predicted)","termid":"PBO:0000782"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: PBO:0116796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRK antisense RNA 1","termid":"PBO:0116796"}


id: SO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:processed","type":"exact"},{"name":"processed pseudogenic rRNA","type":"exact"}],"termid":"SO:0002193"}


id: PBO:0012862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-5' exonuclease for RNA 3' ss-tail","termid":"PBO:0012862"}


id: MONDO:0004798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sheehan syndrome (obsolete MONDO:0004798)","termid":"MONDO:0004798","xrefs":{"Monarch":{"xref_id":"0004798"}}}


id: GO:0072359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the circulatory system over time, from its formation to the mature structure. The circulatory system is the organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis.","definition_xrefs":["GOC:mah","UBERON:0001009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circulatory system development","secondary_identifiers":["GO:0072358"],"synonyms":[{"name":"cardiovascular system development","type":"narrow"}],"termid":"GO:0072359"}


id: GO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of a host serine/threonine kinase TBK1.","definition_xrefs":["PMID:34084167","PMID:22171259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","secondary_identifiers":["VZ:4477"],"synonyms":[{"name":"inhibition of host TBK1 by virus","type":"related"},{"name":"suppression by virus of host TBK1 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","type":"narrow"},{"name":"symbiont-mediated suppression of host TKB signaling","type":"related"}],"termid":"GO:0039723"}


id: GO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with to a member of the Wnt-family of signaling molecules to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete frizzled-2 receptor activity (obsolete GO:0004929)","synonyms":[{"name":"frizzled-2 receptor activity","type":"exact"}],"termid":"GO:0004929"}


id: PBO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 8 pseudogene","termid":"PBO:0042633"}


id: PBO:0067701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 9","termid":"PBO:0067701"}


id: PBO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 3","termid":"PBO:0061792"}


id: PBO:0040661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 7","termid":"PBO:0040661"}


id: FYPO:0001519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A molecular function phenotype in which the observed rate of gamma-glutamyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal gamma-glutamyltransferase activity (obsolete FYPO:0001519)","synonyms":[{"name":"abnormal GGT activity","type":"broad"},{"name":"abnormal gamma-glutamyl transpeptidase activity","type":"exact"}],"termid":"FYPO:0001519"}


id: MONDO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic postaxial polydactyly (obsolete MONDO:0034670)","secondary_identifiers":["Orphanet:498467"],"termid":"MONDO:0034670","xrefs":{"Monarch":{"xref_id":"0034670"}}}


id: PBO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRCB domain protein","termid":"PBO:0000103"}


id: GO:0043995
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88771],"is_not":false,"summary":null,"term":"GO:0043995"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 5) = CoA + histone H4 N6-acetyl-L-lysine (position 5).","definition_xrefs":["PMID:18552846","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0034212","GO:0016746","GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H4K5 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K5 specific)","type":"exact"}],"termid":"GO:0043995","terms_by_termid":{"GO:0043995":null}}


id: PBO:0065837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 2","termid":"PBO:0065837"}


id: MONDO:0010473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by intellectual disability, delayed psychomotor development, seizures, large joint contractures, cardiac abnormalities, and abnormal positioning of the thumbs that has material basis in mutation in the CLIC2 gene on chromosome Xq28.","definition_xrefs":["DOID:0060828","PMID:22814392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-cardiomegaly-congestive heart failure syndrome","secondary_identifiers":["UMLS:C3550913","MEDGEN:763827","OMIM:300886","Orphanet:324410","GARD:17485"],"synonyms":[{"name":"MRXS32","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic 32, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 32","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 32","type":"exact"},{"name":"mental retardation, X-linked, syndromic 32","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 32","type":"exact"}],"termid":"MONDO:0010473","xrefs":{"Monarch":{"xref_id":"0010473"}}}


id: MONDO:0016755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.","definition_xrefs":["NCIT:C3272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"benign peripheral nerve sheath tumor","termid":"MONDO:0016752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibroma","secondary_identifiers":["MEDGEN:45058","DOID:962","GARD:7191","ICD9:215.9","MESH:D009455","ICDO:9540/0","MedDRA:10029267","Orphanet:252183","ONCOTREE:NFIB","UMLS:C0027830","SCTID:404029005","icd11.foundation:221014277"],"synonyms":[{"name":"NFIB","type":"related"},{"name":"neurofibroma","type":"exact"},{"name":"neurofibroma (WHO grade I)","type":"exact"},{"name":"neurofibroma, benign","type":"exact"}],"termid":"MONDO:0016755","xrefs":{"Monarch":{"xref_id":"0016755"}}}


id: MONDO:0007816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune suppression (obsolete MONDO:0007816)","secondary_identifiers":["OMIM:146850"],"synonyms":[{"name":"IS","type":"related"},{"name":"Iscw","type":"related"},{"name":"immune suppression","type":"exact"},{"name":"streptococcal cell wall antigen, suppression of immune response to","type":"related"}],"termid":"MONDO:0007816","xrefs":{"Monarch":{"xref_id":"0007816"}}}


id: GO:0003262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endocardial progenitor cell toward the midline to form the heart field. Cardiac muscle progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into endocardial cells of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardioblast migration to the midline involved in heart field formation","termid":"GO:0060975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial progenitor cell migration to the midline involved in heart field formation","termid":"GO:0003262"}


id: PBO:0029946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029946"}


id: PBO:0073383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETBP1 divergent transcript","termid":"PBO:0073383"}


id: PBO:0052228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCTD5 pseudogene 1","termid":"PBO:0052228"}


id: PBO:0029707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division","termid":"PBO:0029707"}


id: SO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kinetoplast is an interlocked network of thousands of minicircles and tens of maxicircles, located near the base of the flagellum of some protozoan species.","definition_xrefs":["PMID:8395055"],"direct_ancestors":[{"relation_name":"has_part","term_name":"maxicircle","termid":"SO:0000742"},{"relation_name":"has_part","term_name":"minicircle","termid":"SO:0000980"},{"relation_name":"is_a","term_name":"genome","termid":"SO:0001026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetoplast","secondary_identifiers":["http://en.wikipedia.org/wiki/Kinetoplast","SO:0000826"],"synonyms":[{"name":"kinetoplast_chromosome","type":"exact"}],"termid":"SO:0000741"}


id: PBO:0077138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction associated protein 1","termid":"PBO:0077138"}


id: PBO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein like","termid":"PBO:0061068"}


id: GO:0010941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell death (obsolete GO:0010941)","termid":"GO:0010941"}


id: PBO:0113146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-dependent zinc transferase; couples GTP hydrolysis to the activation of methionine aminopeptidase Map1p, especially during zinc starvation; deletion confers reduced fitness in saline; contains GTPase sequence motifs and a CxCC metal-binding motif","termid":"PBO:0113146"}


id: PBO:0058271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4649","termid":"PBO:0058271"}


id: PBO:0072707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 2A","termid":"PBO:0072707"}


id: FYPO:0002597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation does not occur. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"},{"relation_name":"is_a","term_name":"abnormal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"abolished histone H2A phosphorylation during mitotic cell cycle","type":"related"},{"name":"histone H2A phosphorylation abolished during vegetative growth","type":"exact"},{"name":"histone H2A phosphorylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002597"}


id: MONDO:0018547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute tricyclic antidepressant (TCA) poisoning is a potentially lethal intoxication that is characterized by life-threatening arrhythmias (sinus tachycardias, premature ventricular contractions, ventricular arrhythmias), anticholinergic toxidrome (mydriasis, dry mucous membrane, tachycardia, hypertension), central nervous system toxicity (lethargy, coma, myoclonic jerks), refractory hypotension, and sudden death.","definition_xrefs":["Orphanet:43117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute tricyclic antidepressant poisoning","secondary_identifiers":["MEDGEN:1830115","UMLS:C5681319"],"termid":"MONDO:0018547","xrefs":{"Monarch":{"xref_id":"0018547"}}}


id: PBO:0079123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone subunit beta","termid":"PBO:0079123"}


id: GO:0140744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33913806","PMID:33767452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of lncRNA transcription","termid":"GO:0140743"},{"relation_name":"negatively_regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"negative regulation of lncRNA transcription","termid":"GO:0140744"}


id: PBO:0052427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIT proto-oncogene, receptor tyrosine kinase","termid":"PBO:0052427"}


id: PR:P32747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroorotate dehydrogenase (quinone), mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00561","PANTHER:PTHR11938:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.12c","secondary_identifiers":["UniProtKB:P32747"],"synonyms":[{"name":"DHOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHODase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHOdehase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHODH","type":"exact"},{"name":"dihydroorotate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32747"}


id: FYPO:0002790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"vacuoles present in increased numbers","synonyms":[{"name":"additional vacuoles present","type":"exact"},{"name":"extra vacuoles","type":"exact"},{"name":"vacuoles present in greater numbers","type":"exact"}],"termid":"FYPO:0002790"}


id: GO:0021963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinothalamic tract morphogenesis","synonyms":[{"name":"dorsolateral tract of Lissauer morphogenesis","type":"exact"}],"termid":"GO:0021963"}


id: FYPO:0001481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity does not increase as a result of a nutrient stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"},{"relation_name":"is_a","term_name":"abnormal cellular response to nutrient","termid":"FYPO:0001484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0000654","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity increase abolished during cellular response to nutrient","synonyms":[{"name":"absent increase in trehalase activity following nutrient stimulus","type":"exact"},{"name":"neutral trehalase activity increase abolished during cellular response to nutrient","type":"exact"},{"name":"trehalase activity increase abolished during cellular response to nutrient","type":"broad"}],"termid":"FYPO:0001481"}


id: PBO:0084516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm Y57G7A.10/EMC-2, fly CG17556, human TTC35","termid":"PBO:0084516"}


id: GO:0097642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)) to initiate a change in cell activity.","definition_xrefs":["PMID:18687416","InterPro:IPR003287","GOC:bhm","PMID:10871296","PMID:12037140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"calcitonin family receptor activity","termid":"GO:0097642"}


id: MONDO:0017004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome X","termid":"MONDO:0017003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial monosomy of the short arm of chromosome X","secondary_identifiers":["MEDGEN:1826029","GARD:20912","Orphanet:263731","UMLS:C5679689"],"synonyms":[{"name":"partial deletion of chromosome Xp","type":"exact"},{"name":"partial deletion of the short arm of chromosome X","type":"exact"},{"name":"partial monosomy of chromosome Xp","type":"exact"},{"name":"partial monosomy of the short arm of chromosome type X","type":"exact"}],"termid":"MONDO:0017004","xrefs":{"Monarch":{"xref_id":"0017004"}}}


id: GO:0031032
data:
  {"annotated_genes":["SJAG_01732","SJAG_03025","SJAG_04498","SJAG_04703","SJAG_02592","SJAG_03045","SJAG_03088","SJAG_02864","SJAG_00279","SJAG_01943","SJAG_03048","SJAG_02431","SJAG_04621","SJAG_00938","SJAG_04597","SJAG_04930","SJAG_03596","SJAG_04077","SJAG_00700","SJAG_04982","SJAG_04781","SJAG_03379","SJAG_02831","SJAG_04887","SJAG_00228","SJAG_01805","SJAG_00268","SJAG_02700","SJAG_02795","SJAG_01894","SJAG_01665","SJAG_03703","SJAG_01143","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80228],"is_not":false,"summary":null,"term":"GO:0031032"},{"annotations":[111112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[98613,89668,98355,108447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[105471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044837"},{"annotations":[118764,92881,112613,92931,76705,95621,98052,99225,75942,72901,75291,98248,102882,97977,102739,88601,118179,119906,112178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77785],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[97978,95622,98358,101252,118180,88602,101023,102740,99226,112614],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[98602],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[102684],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90339,94747],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[94149,119676],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actomyosin structure organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin organization","type":"exact"},{"name":"actomyosin structure organisation","type":"exact"},{"name":"actomyosin structure organization and biogenesis","type":"related"}],"termid":"GO:0031032","terms_by_termid":{"GO:0000915":null,"GO:0031032":null,"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0074622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 21","termid":"PBO:0074622"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: MONDO:0009475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isovaleric acidemia (IVA) is an autosomal recessively inherited organic aciduria characterized by a deficiency in isovaleryl-CoA dehydrogenase, that has wide clinical variability and that can present in infancy with acute manifestations of vomiting, failure to thrive, seizures, lethargy, a characteristic ''sweaty feet'' odor, acute pancreatitis and mild to severe developmental delay or in childhood with metabolic acidosis (brought on by prolonged fasting, an increased intake of protein-rich food or infections) and that can be fatal if not treated immediately. Chronic intermittent presentations and asymptomatic patients have also been reported.","definition_xrefs":["Orphanet:33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"isovaleric acidemia","secondary_identifiers":["GARD:465","NANDO:1200798","OMIM:243500","NCIT:C98964","NANDO:2200494","MESH:C538167","NORD:712","SCTID:87827003","DOID:14753","ICD10CM:E71.110","UMLS:C0268575","MEDGEN:82822"],"synonyms":[{"name":"IVA","type":"related"},{"name":"IVD deficiency","type":"related"},{"name":"Isovalericacidemia","type":"exact"},{"name":"isovaleric acid CoA dehydrogenase deficiency","type":"exact"},{"name":"isovaleric acid Coa dehydrogenase deficiency","type":"related"},{"name":"isovaleric acidemia","type":"exact"},{"name":"isovaleric aciduria","type":"exact"},{"name":"isovaleryl CoA carboxylase deficiency","type":"related"},{"name":"isovaleryl-CoA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009475","xrefs":{"Monarch":{"xref_id":"0009475"}}}


id: GO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a repeating or polymeric structure, such as a polysaccharide or peptidoglycan.","definition_xrefs":["PMID:14523544","PMID:12925128","PMID:12507420","PMID:12072369","PMID:12225919"],"gene_count":0,"genotype_count":0,"name":"obsolete pattern binding (obsolete GO:0001871)","synonyms":[{"name":"pattern recognition activity","type":"broad"}],"termid":"GO:0001871"}


id: PBO:0084363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Linker protein responsible for recruitment of myosin to the bud neck; interacts with the C-terminal extensions of septins Cdc11p and Shs1p and binds Myo1p to promote cytokinesis","termid":"PBO:0084363"}


id: MONDO:0009963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulbright-Hodes syndrome is characterized by renal dysplasia, growth retardation, phocomelia or mesomelia, radiohumeral fusion, rib abnormalities, anomalies of the external genitalia and a potter-like facies. The syndrome has been described in three infants (one pair of sibs and an unrelated case), all of whom died shortly after birth from respiratory distress resulting from pulmonary hypoplasia and oligohydramnios caused by renal dysplasia. The mode of transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:3404"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ulbright-Hodes syndrome","secondary_identifiers":["UMLS:C1849438","SCTID:719840003","MEDGEN:376585","MESH:C537754","GARD:5394","OMIM:266910"],"synonyms":[{"name":"RL syndrome","type":"related"},{"name":"Ulbright Hodes syndrome","type":"related"},{"name":"renal dysplasia limb defects syndrome","type":"related"},{"name":"renal dysplasia, mesomelia, and radiohumeral fusion","type":"related"},{"name":"renal dysplasia-limb defects syndrome","type":"exact"},{"name":"renal dysplasia-mesomelia-radiohumeral fusion syndrome","type":"exact"}],"termid":"MONDO:0009963","xrefs":{"Monarch":{"xref_id":"0009963"}}}


id: FYPO:0001045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"},{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased acid phosphatase activity","synonyms":[{"name":"reduced acid phosphatase activity","type":"exact"}],"termid":"FYPO:0001045"}


id: GO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["PMID:19193861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose-6-phosphate","synonyms":[{"name":"response to trehalose-6-phosphate stimulus","type":"exact"}],"termid":"GO:0080094"}


id: GO:0032558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide binding","termid":"GO:0032554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"}


id: PBO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF complex transcription corepressor, Whi5","termid":"PBO:0090370"}


id: PR:000037318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin B:Cdk1 complex that is composed of a cdc13 and cdk1 in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:AL","PMID:2665944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc13:cdk1 complex (Schizosaccharomyces pombe)","synonyms":[{"name":"p34cdc2:p56cdc13","type":"related"}],"termid":"PR:000037318"}


id: PBO:0087774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit; disrupts silencing when overproduced; mutant has increased aneuploidy tolerance; essential gene","termid":"PBO:0087774"}


id: PBO:0045181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B2","termid":"PBO:0045181"}


id: PBO:0077262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10 pseudogene 2","termid":"PBO:0077262"}


id: GO:2001174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001174)","synonyms":[{"name":"negative regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"negative regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"negative regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001174"}


id: SO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of the promoters of snRNA genes transcribed by RNA polymerase II or by RNA polymerase III. Located between -45 and -60 relative to the TSS. The human PSE_motif consensus sequence is TCACCNTNA(C|G)TNAAAAG(T|G). The basal transcription factor, snRNA-activating protein complex (SNAPc), binds the PSE_motif and is required for the transcription of both RNA polymerase II and III transcribed small-nuclear RNA genes.","definition_xrefs":["PMID:8339931","PMID:12621023","PMID:11390411","PMID:12651739","PMID:23166507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSE_motif","synonyms":[{"name":"PSE motif","type":"exact"},{"name":"proximal sequence element","type":"exact"}],"termid":"SO:0000017"}


id: PBO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi phosphoprotein 3","termid":"PBO:0048931"}


id: PBO:0058833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8063","termid":"PBO:0058833"}


id: GO:0070043
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95237],"is_not":false,"summary":null,"term":"GO:0070043"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N7-methylguanine.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790982"],"termid":"GO:0070043","terms_by_termid":{"GO:0070043":null}}


id: MONDO:0007982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jansen's metaphyseal chondrodysplasia (JMC) is a very rare autosomal dominant skeletal dysplasia characterized by short-limbed short stature (due to severe metaphyseal changes that are often discovered in childhood by imaging), waddling gait, bowed legs, contracture deformities of the joints, short hands with clubbed fingers, clinodactyly, prominent upper face and small mandible, as well as chronic parathyroid hormone-independent hypercalcemia, hypercalciuria, and mild hypophosphatemia.","definition_xrefs":["Orphanet:33067"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Pyle disease","termid":"MONDO:0009943"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Jansen type","secondary_identifiers":["NCIT:C131868","DOID:0080020","OMIM:156400","MEDGEN:120529","NORD:1307","UMLS:C0265295","MESH:C537564","SCTID:24629003","GARD:79","icd11.foundation:1652660420"],"synonyms":[{"name":"Jansen Type Metaphyseal Chondrodysplasia","type":"exact"},{"name":"Jansen disease","type":"exact"},{"name":"Jansen metaphyseal chondrodysplasia","type":"exact"},{"name":"Jansen metaphyseal dysostosis","type":"exact"},{"name":"Jansen type metaphyseal chondrodysplasia","type":"exact"},{"name":"Jansen's metaphyseal chondrodysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia murk Jansen type","type":"exact"},{"name":"metaphyseal chondrodysplasia, Jansen type","type":"exact"},{"name":"metaphyseal chondrodysplasia, murk Jansen type","type":"exact"},{"name":"murk Jansen type metaphyseal chondrodysplasia","type":"exact"}],"termid":"MONDO:0007982","xrefs":{"Monarch":{"xref_id":"0007982"}}}


id: SO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding locus that originates from within the promoter region of a protein-coding gene, with transcription proceeding in the opposite direction on the other strand.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter_lncRNA_gene","synonyms":[{"name":"bidirectional promoter lncRNA","type":"exact"},{"name":"bidirectional promoter lncRNA gene","type":"exact"},{"name":"bidirectional_promoter_lncRNA_gene","type":"exact"}],"termid":"SO:0002185"}


id: GO:0039624
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer layer of a double or triple concentric icosahedral capsid. Outer capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral outer capsid","synonyms":[{"name":"outer capsid","type":"exact"}],"termid":"GO:0039624"}


id: PR:Q9C0X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- npc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol/phosphatidylinositol transfer protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.04c","synonyms":[{"name":"PG/PI-TP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-npc2","type":"exact"}],"termid":"PR:Q9C0X9"}


id: PBO:0005493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel Two Interacting protein 1","termid":"PBO:0005493"}


id: MONDO:0030071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa 89","secondary_identifiers":["UMLS:C5394552","OMIM:618955","DOID:0112146","MEDGEN:1710499"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 89","type":"exact"},{"name":"RP89","type":"exact"},{"name":"retinitis pigmentosa 89","type":"exact"}],"termid":"MONDO:0030071","xrefs":{"Monarch":{"xref_id":"0030071"}}}


id: MONDO:0020145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete developmental defect of the eye (obsolete MONDO:0020145)","secondary_identifiers":["Orphanet:98553"],"termid":"MONDO:0020145","xrefs":{"Monarch":{"xref_id":"0020145"}}}


id: GO:1903741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:22334681","GOC:rn","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidate phosphatase activity (obsolete GO:1903741)","synonyms":[{"name":"down regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"down-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"downregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"inhibition of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"negative regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903741"}


id: MONDO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma characterized by the presence of papillary epithelial patterns.","definition_xrefs":["NCIT:C79951"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"papilloma","termid":"MONDO:0002363"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary adenoma","secondary_identifiers":["MEDGEN:59999","DOID:3172","UMLS:C0205650"],"synonyms":[{"name":"adenoma, papillary, benign","type":"exact"},{"name":"glandular papilloma","type":"related"},{"name":"papillary adenoma","type":"exact"},{"name":"papillary adenoma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002533","xrefs":{"Monarch":{"xref_id":"0002533"}}}


id: PBO:0056236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 3","termid":"PBO:0056236"}


id: MONDO:0018027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isodicentric chromosome 15 syndrome is a chromosome abnormality that affects many different parts of the body. As the name suggests, people with this condition have an extra chromosome (called an isodicentric chromosome 15) which is made of two pieces of chromosome 15 that are stuck together end-to-end. Although the severity of the condition and the associated features vary from person to person, common signs and symptoms include poor muscle tone in newborns; developmental delay; mild to severe intellectual disability; delayed or absent speech; behavioral abnormalities; and seizures. Most cases of isodicentric chromosome 15 syndrome occur sporadically in people with no family history of the condition. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005153"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication/inversion 15q11","secondary_identifiers":["UMLS:C3711376","MESH:C580205","GARD:5153","MEDGEN:777984","SCTID:723332005","Orphanet:3306"],"synonyms":[{"name":"Duplication/inversion type 15q11","type":"exact"},{"name":"Inv dup(15)","type":"exact"},{"name":"Invdup(15)","type":"exact"},{"name":"Isodicentric 15 chromosome","type":"exact"},{"name":"Isodicentric chromosome 15 syndrome","type":"related"},{"name":"chromosome 15q tetrasomy","type":"related"},{"name":"duplication/inversion 15q11","type":"exact"},{"name":"idic(15)","type":"exact"},{"name":"inverted duplication 15","type":"related"},{"name":"non-distal tetrasomy 15q","type":"exact"},{"name":"non-telomeric tetrasomy 15q","type":"exact"},{"name":"tetrasomy 15q","type":"related"}],"termid":"MONDO:0018027","xrefs":{"Monarch":{"xref_id":"0018027"}}}


id: GO:0036210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration performed by one organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) in another organism. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete protein modification process in another organism (obsolete GO:0036210)","synonyms":[{"name":"protein modification in other organism","type":"exact"},{"name":"protein modification process in other organism","type":"exact"}],"termid":"GO:0036210"}


id: MONDO:0006783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Collection of air and blood in the pleural cavity.","definition_xrefs":["MESH:D006468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemopneumothorax","secondary_identifiers":["MEDGEN:9208","SCTID:16632002","DOID:2718","EFO:1000963","ICD9:511.89","UMLS:C0019077","MedDRA:10060632"],"termid":"MONDO:0006783","xrefs":{"Monarch":{"xref_id":"0006783"}}}


id: FYPO:0002086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicles present in increased numbers","termid":"FYPO:0003416"},{"relation_name":"output_of","term_name":"abnormal exocytosis during vegetative growth","termid":"FYPO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers","synonyms":[{"name":"accumulation of exocytic vesicles","type":"related"},{"name":"additional exocytic vesicles present","type":"exact"},{"name":"exocytic vesicles present in greater numbers","type":"exact"},{"name":"exocytic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"exocytic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"exocytotic vesicles present in increased numbers","type":"exact"},{"name":"extra exocytic vesicles","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers","type":"related"}],"termid":"FYPO:0002086"}


id: PBO:0042185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B2 pseudogene 1","termid":"PBO:0042185"}


id: GO:0140456
data:
  {"annotated_genes":["SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95642],"is_not":false,"summary":null,"term":"GO:0140456"}]},"cv_name":"biological_process","definition":"The release of duplicated meiotic spindle pole bodies (SPBs).","definition_xrefs":["PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body separation","termid":"GO:0110100"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"initial meiotic spindle pole body separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"initial spindle pole body separation involved in meiosis I","type":"exact"},{"name":"meiotic spindle pole body duplication","type":"exact"}],"termid":"GO:0140456","terms_by_termid":{"GO:0140456":null}}


id: PBO:0040964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 35","termid":"PBO:0040964"}


id: MONDO:1011575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in mallard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, mallard","secondary_identifiers":["OMIA:000181-8839"],"termid":"MONDO:1011575","xrefs":{"Monarch":{"xref_id":"1011575"}}}


id: SO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Copia superfamily contain elements coding for specific proteins in this order: GAG, AP, INT, RT, RH. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copia_LTR_retrotransposon","synonyms":[{"name":"Copia LTR retrotransposon","type":"exact"},{"name":"RLC retrotransposon","type":"exact"},{"name":"Ty1 retrotransposon","type":"exact"}],"termid":"SO:0002264"}


id: PBO:0065431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 4","termid":"PBO:0065431"}


id: PBO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_inhibitor_of","termid":"PBO:0000013"}


id: PBO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDAR associated via death domain","termid":"PBO:0045783"}


id: PBO:0046919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member C, pseudogene","termid":"PBO:0046919"}


id: PBO:0081283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 66","termid":"PBO:0081283"}


id: MONDO:0016341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease with restrictive cardiomyopathy (obsolete MONDO:0016341)","secondary_identifiers":["Orphanet:217638"],"termid":"MONDO:0016341","xrefs":{"Monarch":{"xref_id":"0016341"}}}


id: MONDO:0014527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progeroid features-hepatocellular carcinoma predisposition syndrome","secondary_identifiers":["MEDGEN:863898","DOID:0111264","UMLS:C4015461","OMIM:616200","Orphanet:435953","GARD:17722"],"synonyms":[{"name":"RJALS","type":"related"},{"name":"RUIJS-Aalfs syndrome","type":"related"},{"name":"Ruijs-Aalfs syndrome","type":"exact"}],"termid":"MONDO:0014527","xrefs":{"Monarch":{"xref_id":"0014527"}}}


id: PBO:0041156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 11","termid":"PBO:0041156"}


id: PBO:0078716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 1-1","termid":"PBO:0078716"}


id: PBO:0066298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 3 member A, pseudogene","termid":"PBO:0066298"}


id: PBO:0069306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 562, pseudogene","termid":"PBO:0069306"}


id: GO:1903710
data:
  {"annotated_genes":["SJAG_02344","SJAG_02059","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69271,111246,117649],"is_not":false,"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The process in which spermine is transported across a membrane.","definition_xrefs":["PMID:15637075","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermine transport","termid":"GO:0000296"},{"relation_name":"is_a","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"spermine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903710","terms_by_termid":{"GO:1903710":null}}


id: MONDO:0006833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological enlargement of the lingual thyroid, ectopic thyroid tissue at the base of the tongue. It may cause upper airway obstruction; dysphagia; or hypothyroidism symptoms.","definition_xrefs":["MESH:D047268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lingual goiter","secondary_identifiers":["DOID:13196","SCTID:75667007","MEDGEN:75766","UMLS:C0271760","ICD9:759.2"],"termid":"MONDO:0006833","xrefs":{"Monarch":{"xref_id":"0006833"}}}


id: PR:Q10084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter mfs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.05","synonyms":[{"name":"Spom972h-mfs2","type":"exact"}],"termid":"PR:Q10084"}


id: PBO:0080995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 26","termid":"PBO:0080995"}


id: PBO:0069155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 407, pseudogene","termid":"PBO:0069155"}


id: PBO:0088156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vesicle membrane receptor protein (v-SNARE); involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins; SNC1 has a paralog, SNC2, that arose from the whole genome duplication","termid":"PBO:0088156"}


id: PBO:0065462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD6 antisense RNA 2","termid":"PBO:0065462"}


id: MONDO:0021720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fetal alcohol spectrum disorders (obsolete MONDO:0021720)","termid":"MONDO:0021720","xrefs":{"Monarch":{"xref_id":"0021720"}}}


id: GO:0061521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a hepatic stellate cell.","definition_xrefs":["PMID:9407545","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell differentiation","termid":"GO:0061521"}


id: GO:0007101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Centrosome duplication and separation in the context of a meiotic cell cycle in a male organism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete male meiosis centrosome cycle (obsolete GO:0007101)","synonyms":[{"name":"centrosome cycle involved in male meiotic cell cycle","type":"exact"}],"termid":"GO:0007101"}


id: PBO:0034365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trophically_interacts_with","termid":"PBO:0034365"}


id: PBO:0085406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, putative ammonium transporter; regulation pattern suggests a possible role in export of ammonia from the cell; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family of putative transporters","termid":"PBO:0085406"}


id: GO:0090508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenylethylamine that contribute to synaptic transmission.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylethylamine biosynthetic process","termid":"GO:0042444"},{"relation_name":"is_a","term_name":"phenylethylamine metabolic process involved in synaptic transmission","termid":"GO:0090507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phenylethylamine biosynthetic process involved in synaptic transmission","termid":"GO:0090508"}


id: PATO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's lacking odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorless","termid":"PATO:0001208"}


id: GO:0099121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fungal sorus over time, from its formation to the mature structure. A fungal sorus is a spore containing structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungal sorus development","termid":"GO:0099121"}


id: RO:HOM0000042
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is based on recent shared ancestry, characterizing a monophyletic group.","definition_xrefs":["ISBN:978-0252068140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_apomorphy_relationship_with","synonyms":[{"name":"apomorphous to","type":"exact"},{"name":"synapomorphy","type":"related"}],"termid":"RO:HOM0000042"}


id: PBO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology","termid":"PBO:0030997"}


id: SO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region where a transformation occurs in a protein after it has been synthesized. This which may regulate, stabilize, crosslink or introduce new chemical functionalities in the protein.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"post_translationally_modified_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Post_translational_modification","BS:00052"],"synonyms":[{"name":"mod_res","type":"exact"},{"name":"modified residue","type":"exact"},{"name":"post_translational_modification","type":"exact"}],"termid":"SO:0001089"}


id: MOD:01165
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and 5'-phosphoadenosine through either a phosphodiester or a phosphoramide bond.","definition_xrefs":["Unimod:405","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylated residue","synonyms":[{"name":"5'phos Adenosinyl","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"Phosphoadenosine","type":"related"}],"termid":"MOD:01165"}


id: PBO:0065286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 1B","termid":"PBO:0065286"}


id: GO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid catabolic process","termid":"GO:0070393"},{"relation_name":"is_a","term_name":"lipoteichoic acid metabolic process","termid":"GO:0070394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid catabolic process","synonyms":[{"name":"lipoteichoic acid breakdown","type":"exact"},{"name":"lipoteichoic acid catabolism","type":"exact"},{"name":"lipoteichoic acid degradation","type":"exact"}],"termid":"GO:0070396"}


id: PATO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's lying or growing on the ground but with erect or rising tips.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostrate","termid":"PATO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decumbent","termid":"PATO:0002343"}


id: GO:0072550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triferuloyl spermidine + NADPH + O2 = diferuloyl mono-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"triferuloylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11262"],"synonyms":[{"name":"triferuloyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072550"}


id: FYPO:0001892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from middle meiotic genes measured in a cell is lower than normal. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"decreased RNA level of middle meiotic genes during late meiosis","type":"exact"},{"name":"decreased level of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"decreased level of middle meiotic gene mRNA during late meiotic nuclear division","type":"exact"},{"name":"decreased level of middle meiotic gene transcripts during late meiosis","type":"exact"},{"name":"reduced level of middle meiotic gene mRNA during late meiosis","type":"exact"}],"termid":"FYPO:0001892"}


id: PBO:0071054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 56","termid":"PBO:0071054"}


id: MONDO:0037253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stromal tumor that arises from the ovary and is characterized by the presence of cells that contain lipid and resemble theca cells. The vast majority of cases are benign.","definition_xrefs":["NCIT:C66989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"},{"relation_name":"is_a","term_name":"thecoma","termid":"MONDO:0037252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian thecoma","secondary_identifiers":["UMLS:C1882229","MEDGEN:364155","SCTID:254864005"],"synonyms":[{"name":"ovarian theca cell neoplasm","type":"exact"},{"name":"ovarian theca cell tumor","type":"exact"},{"name":"ovarian theca cell tumour","type":"exact"},{"name":"ovarian thecoma","type":"exact"},{"name":"ovary thecoma","type":"exact"},{"name":"theca cell neoplasm of ovary","type":"exact"},{"name":"theca cell neoplasm of the ovary","type":"exact"},{"name":"theca cell tumor of ovary","type":"exact"},{"name":"theca cell tumor of the ovary","type":"exact"},{"name":"theca cell tumour of ovary","type":"exact"},{"name":"theca cell tumour of the ovary","type":"exact"},{"name":"thecoma of ovary","type":"exact"},{"name":"thecoma of the ovary","type":"exact"}],"termid":"MONDO:0037253","xrefs":{"Monarch":{"xref_id":"0037253"}}}


id: _global:results_in_commitment_to
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","secondary_identifiers":["GOREL:0001017","RO:0002348"],"termid":"_global:results_in_commitment_to"}


id: GO:1900859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of brevianamide F biosynthetic process (obsolete GO:1900859)","synonyms":[{"name":"down regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"down-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"downregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900859"}


id: GO:1903013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22365144","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"response to DIF-1","type":"related"},{"name":"response to DIF1","type":"related"}],"termid":"GO:1903013"}


id: PBO:0028865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA_level_during_vegetative_growth","termid":"PBO:0028865"}


id: PBO:0060221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 4","termid":"PBO:0060221"}


id: PBO:0108923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRNT1 pseudogene 1","termid":"PBO:0108923"}


id: PBO:0067893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 195","termid":"PBO:0067893"}


id: MONDO:0032763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 62","secondary_identifiers":["DOID:0111991","OMIM:618459","UMLS:C5193109","MEDGEN:1673905"],"synonyms":[{"name":"IMD62","type":"related"},{"name":"IMMUNODEFICIENCY 62","type":"related"},{"name":"immunodeficiency 62","type":"exact"}],"termid":"MONDO:0032763","xrefs":{"Monarch":{"xref_id":"0032763"}}}


id: GO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"negative regulation of microtubule depolymerization","synonyms":[{"name":"down regulation of microtubule depolymerization","type":"exact"},{"name":"down-regulation of microtubule depolymerization","type":"exact"},{"name":"downregulation of microtubule depolymerization","type":"exact"},{"name":"inhibition of microtubule depolymerization","type":"narrow"},{"name":"microtubule rescue","type":"narrow"},{"name":"microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule catastrophe","type":"narrow"},{"name":"negative regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0007026"}


id: GO:0033028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myeloid cell, a cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.","definition_xrefs":["PMID:15330259","CL:0000763","PMID:17133093","GOC:mtg_apoptosis","GOC:add","PMID:11292031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell apoptotic process","synonyms":[{"name":"apoptosis of myeloid cells","type":"exact"},{"name":"myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033028"}


id: FYPO:0001736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster transfer","termid":"FYPO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased iron-sulfur cluster transfer","synonyms":[{"name":"decreased iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"decreased iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"decreased iron-sulfur cluster transfer to ferredoxin","type":"narrow"},{"name":"decreased iron-sulphur cluster transfer","type":"exact"},{"name":"reduced iron-sulfur cluster transfer","type":"exact"}],"termid":"FYPO:0001736"}


id: GO:0019091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lrRNA, large subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial rRNA export from mitochondrion","termid":"GO:0019090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrial lrRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial lrRNA","type":"broad"},{"name":"mitochondrial lrRNA export","type":"exact"},{"name":"mitochondrial lrRNA export from mitochondria","type":"exact"},{"name":"mitochondrial lrRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial lrRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial lrRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019091"}


