# terms

id: PBO:0077534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 247","termid":"PBO:0077534"}


id: GO:0071388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cortisone","termid":"GO:0051413"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cortisone stimulus","termid":"GO:0071388"}


id: GO:0005200
data:
  {"annotated_genes":["SJAG_04003","SJAG_01384","SJAG_02509","SJAG_04387","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58007,61092,63461,78178,109381],"is_not":false,"summary":null,"term":"GO:0005200"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01384":null,"SJAG_02509":null,"SJAG_03145":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of cytoskeleton","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005200","terms_by_termid":{"GO:0005200":null}}


id: GO:1904752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","PMID:20693317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904752"}


id: PBO:0045272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 19","termid":"PBO:0045272"}


id: GO:0060053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neurofilament cytoskeleton","termid":"GO:0060053"}


id: GO:0000252
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110396],"is_not":false,"summary":null,"term":"GO:0000252"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysteroid-4-alpha-carboxylate + NADP+ = a 3-oxosteroid + CO2 + NADPH.","definition_xrefs":["EC:1.1.1.170","PMID:9811880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-194718","Reactome:R-HSA-194642"],"synonyms":[{"name":"3beta-hydroxy-4alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating)","type":"related"},{"name":"3beta-hydroxy-4beta-methyl-5alpha-cholest-7-ene-4alpha-carboxylate:NAD(P)+ 3-oxidoreductase (decarboxylating)","type":"exact"},{"name":"3beta-hydroxy-4beta-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating)","type":"related"},{"name":"3beta-hydroxy-4beta-methylcholestenoate dehydrogenase activity","type":"related"},{"name":"C-3 sterol dehydrogenase (C-4 decarboxylase) activity","type":"related"},{"name":"C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity","type":"exact"},{"name":"C-3 sterol dehydrogenase activity","type":"related"},{"name":"sterol 4alpha-carboxylic decarboxylase activity","type":"related"},{"name":"sterol-4-carboxylate 3-dehydrogenase (decarboxylating) activity","type":"related"},{"name":"sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)","type":"related"}],"termid":"GO:0000252","terms_by_termid":{"GO:0000252":null}}


id: PBO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031651"}


id: PBO:0030166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_swollen_cell","termid":"PBO:0030166"}


id: PBO:0085031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase regulatory subunit of the 26S proteasome; similar to putative proteasomal subunits in other species; null mutant is temperature sensitive and exhibits cell cycle and proteasome assembly defects; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085031"}


id: PBO:0002786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA hydrolase (predicted)","termid":"PBO:0002786"}


id: GO:0140483
data:
  {"annotated_genes":["SJAG_00794","SJAG_04076","SJAG_04884","SJAG_04259","SJAG_03217"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95647,102756,105804,110217,114094],"is_not":false,"summary":null,"term":"GO:0140483"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings the kinetochore and another molecule into contact, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_03217":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"kinetochore adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inner kinetochore adaptor activity","type":"narrow"},{"name":"outer kinetochore adaptor activity","type":"narrow"}],"termid":"GO:0140483","terms_by_termid":{"GO:0140483":null}}


id: GO:0043451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene catabolic process","synonyms":[{"name":"alkene breakdown","type":"exact"},{"name":"alkene catabolism","type":"exact"},{"name":"alkene degradation","type":"exact"}],"termid":"GO:0043451"}


id: GO:0140549
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the spore core (endospore core) that separates it from its external environment.","definition_xrefs":["PMID:23202530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spore inner membrane","synonyms":[{"name":"spore membrane","type":"broad"}],"termid":"GO:0140549"}


id: GO:0010564
data:
  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id: PBO:0113104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta (pol eta); involved in translesion synthesis during post-replication repair; catalyzes synthesis of DNA opposite cyclobutane pyrimidine dimers and other lesions; involved in formation of post-replicative damage-induced genome-wide cohesion; may also have role in protection against mitochondrial mutagenesis; may possibly be involved in meiosis; mutations in human pol eta are responsible for XPV","termid":"PBO:0113104"}


id: PBO:0073296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 18","termid":"PBO:0073296"}


id: FYECO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the external environment in which an experiment is conducted.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping experimental environment","termid":"FYECO:0000132"}


id: MONDO:0035819
data:
  {"annotated_genes":["SJAG_03892"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86923],"is_not":false,"summary":null,"term":"MONDO:0035819"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":0,"is_obsolete":false,"name":"cerebellar hypoplasia-intellectual disability-congenital microcephaly-dystonia-anemia-growth retardation syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18020","MEDGEN:1780242","Orphanet:603448","UMLS:C5543287","OMIM:619273"],"synonyms":[{"name":"CIMDAG syndrome","type":"exact"}],"termid":"MONDO:0035819","terms_by_termid":{"MONDO:0035819":null},"xrefs":{"Monarch":{"xref_id":"0035819"}}}


id: GO:0036367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ability of a photoreceptor to adjust to varying levels of light.","definition_xrefs":["GOC:gap","PMID:16039565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"light adaption","termid":"GO:0036367"}


id: PBO:0081396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 235","termid":"PBO:0081396"}


id: PBO:0080922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta","termid":"PBO:0080922"}


id: MONDO:1012086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, sheep","secondary_identifiers":["OMIA:000393-9940"],"termid":"MONDO:1012086","xrefs":{"Monarch":{"xref_id":"1012086"}}}


id: PBO:0013770
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of loss of CAMP-dependent protein Kinase","termid":"PBO:0013770"}


id: MONDO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the TECTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 12","secondary_identifiers":["OMIM:601543","GARD:18107","MESH:C563295","DOID:0110544","MEDGEN:321902","UMLS:C1832187"],"synonyms":[{"name":"DFNA12","type":"narrow"},{"name":"DFNA8","type":"narrow"},{"name":"TECTA autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 12","type":"narrow"},{"name":"autosomal dominant deafness 8","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 12","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in TECTA","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 12","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 12","type":"exact"},{"name":"deafness, autosomal dominant 12","type":"narrow"},{"name":"deafness, autosomal dominant 8","type":"narrow"},{"name":"deafness, autosomal dominant 8/12","type":"narrow"},{"name":"deafness, autosomal dominant type 12","type":"narrow"}],"termid":"MONDO:0011102","xrefs":{"Monarch":{"xref_id":"0011102"}}}


id: MONDO:0016938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of chromosome 20","secondary_identifiers":["GARD:20858","MEDGEN:1377617","Orphanet:262692","SCTID:726360002","UMLS:C4518509"],"synonyms":[{"name":"partial duplication of chromosome 20","type":"exact"},{"name":"partial trisomy of chromosome type 20","type":"exact"}],"termid":"MONDO:0016938","xrefs":{"Monarch":{"xref_id":"0016938"}}}


id: PBO:0030073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_serine_import","termid":"PBO:0030073"}


id: GO:1904177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23081848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adipose tissue development","secondary_identifiers":["Reactome:R-HSA-9843745"],"synonyms":[{"name":"regulation of adipogenesis","type":"related"}],"termid":"GO:1904177"}


id: PBO:0085332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein (PITP); downregulates Plb1p-mediated turnover of phosphatidylcholine; forms a complex with Psd2p which appears essential for maintenance of vacuolar PE levels; found in the cytosol and microsomes; homologous to Pdr16p; deletion affects phospholipid composition","termid":"PBO:0085332"}


id: GO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a follicular B cell. Follicular B cells are major population of mature recirculating B cells in the spleen and are located in the B-cell follicle region.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular B cell differentiation","synonyms":[{"name":"follicular B cell development","type":"related"},{"name":"follicular B lymphocyte differentiation","type":"exact"},{"name":"follicular B-cell differentiation","type":"exact"},{"name":"follicular B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002316"}


id: PBO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein","termid":"PBO:0000068"}


id: PBO:0109295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MX1 antisense RNA 1","termid":"PBO:0109295"}


id: MONDO:0019070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete liposarcoma (obsolete MONDO:0019070)","termid":"MONDO:0019070","xrefs":{"Monarch":{"xref_id":"0019070"}}}


id: PBO:0069711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 991, pseudogene","termid":"PBO:0069711"}


id: RO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_growth_of","termid":"RO:0002343"}


id: GO:0075178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075178)","synonyms":[{"name":"positive regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075178"}


id: PR:Q10287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.05c","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs1","type":"exact"}],"termid":"PR:Q10287"}


id: GO:0015220
data:
  {"annotated_genes":["SJAG_00763"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115466],"is_not":false,"summary":null,"term":"GO:0015220"}]},"cv_name":"molecular_function","definition":"Enables the transfer of choline from one side of a membrane to the other. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"choline transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6797956","Reactome:R-HSA-429594","Reactome:R-HSA-444433","GO:0005306","Reactome:R-HSA-5658483"],"synonyms":[{"name":"amino acid/choline transmembrane transporter activity","type":"narrow"},{"name":"choline permease activity","type":"exact"}],"termid":"GO:0015220","terms_by_termid":{"GO:0015220":null}}


id: GO:0071521
data:
  {"annotated_genes":["SJAG_00845","SJAG_00514","SJAG_00596","SJAG_03453","SJAG_04509","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88217,90190,91172,93812,104006,104840],"is_not":false,"summary":null,"term":"GO:0071521"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of the small GTPase Cdc42 with additional proteins. In Schizosaccharomyces the complex contains the Cdc42, Ras1, Scd1, Scd2, andShk1 proteins, and functions in the Ras1-Scd GTPase signaling pathway.","definition_xrefs":["GOC:vw","PMID:7923372","PMID:10567532","PMID:8943016","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00596":null,"SJAG_00845":null,"SJAG_01794":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cdc42 GTPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ras1-Scd1-Scd2-Cdc42-Shk1 complex","type":"exact"}],"termid":"GO:0071521","terms_by_termid":{"GO:0071521":null}}


id: MONDO:0009142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia with Ringbinden","secondary_identifiers":["UMLS:C1857089","MEDGEN:346509","OMIM:224550","MESH:C565608"],"synonyms":[{"name":"dystonia with Ringbinden","type":"exact"}],"termid":"MONDO:0009142","xrefs":{"Monarch":{"xref_id":"0009142"}}}


id: SO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new donor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_donor","synonyms":[{"name":"cryptic splice donor","type":"exact"}],"termid":"SO:0001571"}


id: PBO:0051352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-2 (pseudogene)","termid":"PBO:0051352"}


id: PBO:0030387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030387"}


id: MONDO:0030525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2B, generalized intermediate","secondary_identifiers":["UMLS:C5562009","OMIM:619588","MEDGEN:1794219"],"synonyms":[{"name":"EBS2B","type":"exact"}],"termid":"MONDO:0030525","xrefs":{"Monarch":{"xref_id":"0030525"}}}


id: GO:0098945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic active zone membrane (obsolete GO:0098945)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098945"}


id: PBO:0087265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr kinase involved in late nuclear division; one of the mitotic exit network (MEN) proteins; necessary for the execution of cytokinesis; also plays a role in regulating the stability of SWI5 and CLB2 mRNAs; DBF20 has a paralog, DBF2, that arose from the whole genome duplication","termid":"PBO:0087265"}


id: MONDO:0012615
data:
  {"annotated_genes":["SJAG_03333"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87437],"is_not":false,"summary":null,"term":"MONDO:0012615"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TUSC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:370847","DOID:0081183","GARD:22543","MESH:C567016","OMIM:611093","UMLS:C1970197"],"synonyms":[{"name":"MRT7","type":"related"},{"name":"TUSC3 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TUSC3","type":"exact"},{"name":"intellectual disability, autosomal recessive 22","type":"related"},{"name":"intellectual disability, autosomal recessive 7","type":"exact"},{"name":"intellectual disability, autosomal recessive type 7","type":"exact"},{"name":"mental retardation, autosomal recessive 22","type":"related"},{"name":"mental retardation, autosomal recessive 7","type":"related"},{"name":"mental retardation, autosomal recessive type 7","type":"exact"}],"termid":"MONDO:0012615","terms_by_termid":{"MONDO:0012615":null},"xrefs":{"Monarch":{"xref_id":"0012615"}}}


id: PBO:0051284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-27","termid":"PBO:0051284"}


id: PR:Q9P6N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1802 gene.","definition_xrefs":["UniProtKB:Q9P6N1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.16c","synonyms":[{"name":"Spom972h-atg1802","type":"exact"},{"name":"meiotically up-regulated gene 179 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N1"}


id: PBO:0062867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTUD4 pseudogene 1","termid":"PBO:0062867"}


id: MONDO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sammartino-Decreccio syndrome","secondary_identifiers":["UMLS:C2931447","MEDGEN:419806"],"synonyms":[{"name":"Sammartino Decreccio syndrome","type":"related"},{"name":"superficial annular corneal dystrophy, ichthyosis nigrans, microcephaly and mild mental subnormality","type":"related"}],"termid":"MONDO:0042600","xrefs":{"Monarch":{"xref_id":"0042600"}}}


id: PBO:0057489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 607","termid":"PBO:0057489"}


id: PBO:0027116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_premeiotic_DNA_replication_during_azygotic_meiosis","termid":"PBO:0027116"}


id: PBO:0073627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 11","termid":"PBO:0073627"}


id: GO:1901142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving insulin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insulin metabolic process","synonyms":[{"name":"insulin metabolism","type":"exact"}],"termid":"GO:1901142"}


id: GO:0097298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the nucleus.","definition_xrefs":["GOC:mah","PMID:19366728","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus size","synonyms":[{"name":"regulation of nuclear size","type":"exact"},{"name":"regulation of nuclear volume","type":"exact"}],"termid":"GO:0097298"}


id: GO:0089717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete spanning component of membrane (obsolete GO:0089717)","termid":"GO:0089717"}


id: GO:1901379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of potassium ion transmembrane transport","synonyms":[{"name":"regulation of potassium ion membrane transport","type":"exact"}],"termid":"GO:1901379"}


id: MONDO:0044977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of receptor activity (obsolete MONDO:0044977)","termid":"MONDO:0044977","xrefs":{"Monarch":{"xref_id":"0044977"}}}


id: PBO:0030471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_spindle_pole_body_separation","termid":"PBO:0030471"}


id: GO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a lipopolysaccharide (LPS) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Lipopolysaccharides are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:15379975","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"LPS-mediated signaling pathway","type":"exact"},{"name":"lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031663"}


id: GO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell apoptotic process","termid":"GO:0010656"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"down-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"downregulation of smooth muscle cell apoptosis","type":"exact"},{"name":"inhibition of smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of SMC apoptosis","type":"exact"},{"name":"negative regulation of smooth muscle cell apoptosis","type":"narrow"}],"termid":"GO:0034392"}


id: GO:0002909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"negative regulation of B cell deletion","termid":"GO:0002868"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"negatively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral B cell deletion","synonyms":[{"name":"down regulation of peripheral B cell deletion","type":"exact"},{"name":"down-regulation of peripheral B cell deletion","type":"exact"},{"name":"downregulation of peripheral B cell deletion","type":"exact"},{"name":"inhibition of peripheral B cell deletion","type":"narrow"}],"termid":"GO:0002909"}


id: GO:0042797
data:
  {"annotated_genes":["SJAG_04261","SJAG_01765","SJAG_02101","SJAG_04408"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75527,76877,77404,80050],"is_not":false,"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The synthesis of transfer RNA (tRNA) from a DNA template by RNA polymerase III (Pol III), originating at a Pol III promoter.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"tRNA transcription","termid":"GO:0009304"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01765":null,"SJAG_02101":null,"SJAG_04261":null,"SJAG_04408":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006351","GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tRNA transcription from Pol III promoter","type":"exact"},{"name":"tRNA transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0042797","terms_by_termid":{"GO:0042797":null}}


id: MONDO:0800206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","secondary_identifiers":["UMLS:C2675683","MEDGEN:436495"],"synonyms":[{"name":"EBDSC","type":"exact"}],"termid":"MONDO:0800206","xrefs":{"Monarch":{"xref_id":"0800206"}}}


id: GO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071175"}


id: SO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of one or more nucleotides added between two adjacent nucleotides in the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion","secondary_identifiers":["loinc:LA6687-3","SO:1000034"],"synonyms":[{"name":"insertion","type":"exact"},{"name":"nucleotide insertion","type":"exact"},{"name":"nucleotide_insertion","type":"exact"}],"termid":"SO:0000667"}


id: PBO:0066736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 33","termid":"PBO:0066736"}


id: PBO:0076579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 7","termid":"PBO:0076579"}


id: MOD:01238
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-lysine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:9629898","PubMed:11327326","Unimod:53#K","PubMed:15133838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"lysine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01238"}


id: PBO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 136","termid":"PBO:0042066"}


id: PBO:0086992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for splicing of the group I intron bI5 of the COB pre-mRNA; nuclear-encoded mitochondrial protein that binds to the RNA to promote splicing; also involved in but not essential for splicing of the COB bI2 intron and the intron in the 21S rRNA gene","termid":"PBO:0086992"}


id: PATO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000725 function value (obsolete PATO:0000725)","termid":"PATO:0000725"}


id: GO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a iC3b product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"complement component iC3b binding","termid":"GO:0001852"}


id: PBO:0039015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3L2 pseudogene 1","termid":"PBO:0039015"}


id: GO:0016329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function held by products which directly regulate any step in the process of apoptosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis regulator activity (obsolete GO:0016329)","synonyms":[{"name":"apoptosis regulator activity","type":"exact"}],"termid":"GO:0016329"}


id: PBO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 2","termid":"PBO:0043985"}


id: MONDO:0010307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 73","secondary_identifiers":["DOID:0112017","MEDGEN:335293","OMIM:300355","MESH:C564528","UMLS:C1845860","GARD:22673"],"synonyms":[{"name":"MRX73","type":"exact"},{"name":"intellectual disability, X-linked 73","type":"exact"},{"name":"mental retardation, X-linked 73","type":"related"},{"name":"mental retardation, X-linked 73, X-linked recessive","type":"exact"}],"termid":"MONDO:0010307","xrefs":{"Monarch":{"xref_id":"0010307"}}}


id: MONDO:0700094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Robertsonian translocation Down syndrome in which translocation displacement of the end regions of chromosomes occurred with loss of chromosomal material between the two nonhomologous chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"Robertsonian translocation Down syndrome","termid":"MONDO:0700082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbalanced Robertsonian translocation Down syndrome","termid":"MONDO:0700094","xrefs":{"Monarch":{"xref_id":"0700094"}}}


id: GO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + 2-oxoglutarate = mercaptopyruvate + L-glutamate.","definition_xrefs":["RHEA:17441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"L-cysteine transaminase activity","secondary_identifiers":["EC:2.6.1.3","Reactome:R-HSA-9012597","MetaCyc:CYSTEINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-cysteine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"cysteine aminotransferase activity","type":"broad"},{"name":"cysteine transaminase activity","type":"exact"}],"termid":"GO:0047801"}


id: GO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Co2+)(out) = (Zn2+ or Co2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt, zinc uptake permease activity (obsolete GO:0015339)","synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"exact"}],"termid":"GO:0015339"}


id: GO:0008036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a diuretic hormone and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"diuretic hormone receptor activity","termid":"GO:0008036"}


id: GO:0021689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar molecular layer. This process pertains to the physical shaping of a rudimentary structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["ISBN:0838580343","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer structural organization","synonyms":[{"name":"cerebellar molecular layer structural organisation","type":"exact"}],"termid":"GO:0021689"}


id: MONDO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the colon","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"},{"relation_name":"is_a","term_name":"colorectal carcinoma","termid":"MONDO:0024331"},{"relation_name":"is_a","term_name":"epithelial tumor of colon","termid":"MONDO:0024479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colon carcinoma","secondary_identifiers":["icd11.foundation:865099988","NCIT:C4910","SCTID:269533000","UMLS:C0699790","EFO:1001950","DOID:1520","MEDGEN:147065"],"synonyms":[{"name":"carcinoma of colon","type":"exact"},{"name":"carcinoma of the colon","type":"exact"},{"name":"colon cancer","type":"broad"},{"name":"colon carcinoma","type":"exact"},{"name":"colonic carcinoma","type":"exact"}],"termid":"MONDO:0002032","xrefs":{"Monarch":{"xref_id":"0002032"}}}


id: PBO:0091792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Muk1","termid":"PBO:0091792"}


id: PBO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_structural_homology_relationship_with","termid":"PBO:0034050"}


id: PBO:0073964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 13","termid":"PBO:0073964"}


id: MONDO:0012627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing juvenile myclonic epilepsy, idiopathic generalized epilepsy, or childhood absence epilepsy in which the cause of the disease is a mutation in the GABRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 13","secondary_identifiers":["DOID:0111314","MEDGEN:861910","MESH:C567002","OMIM:611136","UMLS:C4013473"],"synonyms":[{"name":"EIG13","type":"exact"},{"name":"GABRA1 juvenile myoclonic epilepsy","type":"related"},{"name":"epilepsy, childhood absence, susceptibility to, 4","type":"related"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 13","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 13","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 5","type":"related"},{"name":"juvenile myoclonic epilepsy caused by mutation in GABRA1","type":"related"},{"name":"susceptibility to idiopathic generalised epilepsy 13","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 13","type":"exact"}],"termid":"MONDO:0012627","xrefs":{"Monarch":{"xref_id":"0012627"}}}


id: PBO:0005648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf18","termid":"PBO:0005648"}


id: GO:0007254
data:
  {"annotated_genes":["SJAG_01718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106597],"is_not":false,"summary":null,"term":"GO:0007254"}]},"cv_name":"biological_process","definition":"A MAPK cascade containing at least the JNK (MAPK8) MAP kinase. It starts with the activation of JUN3K (a MAPK3K), which activates JNKK a MAP2K), which in turn activates JNK. The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinases in the downstream tier. The JNK cascade is activated by stress signals, as well as by G protein-coupled receptors, growth factors, and cytokines, and results in cellular responses such as cell proliferation, cell differentiation, apoptosis and inflammation.","definition_xrefs":["PMID:11790549","PMID:20811974","PMID:23125017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"JNK cascade","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-450321"],"synonyms":[{"name":"JNK1 cascade","type":"narrow"},{"name":"JNK2 cascade","type":"narrow"},{"name":"JNK3 cascade","type":"narrow"},{"name":"MAPK10 cascade","type":"narrow"},{"name":"MAPK8 cascade","type":"exact"},{"name":"MAPK9 cascade","type":"narrow"},{"name":"SAPK cascade","type":"broad"},{"name":"c-Jun N-terminal kinase cascade","type":"exact"},{"name":"stress-activated protein kinase cascade","type":"broad"}],"termid":"GO:0007254","terms_by_termid":{"GO:0007254":null}}


id: MONDO:0016108
data:
  {"annotated_genes":["SJAG_02919","SJAG_04567","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86562,86560,86561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012130"}]},"cv_name":"mondo","definition":"Autosomal dominant form of distal myopathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant distal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680803","Orphanet:206650","GARD:20361","MEDGEN:1826097"],"synonyms":[{"name":"distal myopathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0016108","terms_by_termid":{"MONDO:0012130":null},"xrefs":{"Monarch":{"xref_id":"0016108"}}}


id: FYPO:0005135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to linear element","synonyms":[{"name":"normal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0005135"}


id: GO:0008718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor.","definition_xrefs":["RHEA:18125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase activity","synonyms":[{"name":"D-amino-acid:(acceptor) oxidoreductase (deaminating)","type":"exact"},{"name":"D-amino-acid:acceptor oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0008718"}


id: PBO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Srp1 family splicing factor (predicted)","termid":"PBO:0000702"}


id: GO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of border follicle cell delamination","synonyms":[{"name":"activation of border follicle cell delamination","type":"narrow"},{"name":"positive regulation of border cell delamination","type":"broad"},{"name":"stimulation of border follicle cell delamination","type":"narrow"},{"name":"up regulation of border follicle cell delamination","type":"exact"},{"name":"up-regulation of border follicle cell delamination","type":"exact"},{"name":"upregulation of border follicle cell delamination","type":"exact"}],"termid":"GO:0030711"}


id: GO:0043213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a bacteriocin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Bacteriocins are a group of antibiotics produced by bacteria and are encoded by a group of naturally occurring plasmids, e.g. Col E1. Bacteriocins are toxic to bacteria closely related to the bacteriocin producing strain.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"bacteriocin transport","termid":"GO:0043213"}


id: MONDO:0011847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing migraines without aura.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine without aura, susceptibility to, 4","secondary_identifiers":["ICD9:346.1","MESH:D020326","UMLS:C1843773","NCIT:C117004","SCTID:56097005","MEDGEN:336040","HP:0002083","OMIM:607501"],"synonyms":[{"name":"MGOA","type":"related"},{"name":"MGR4","type":"exact"},{"name":"common migraine","type":"related"},{"name":"migraine without aura, susceptibility to, 4","type":"exact"},{"name":"migraine without aura, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0011847","xrefs":{"Monarch":{"xref_id":"0011847"}}}


id: FYPO:0009047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dimethyl sulfoxide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to dimethyl sulfoxide","synonyms":[{"name":"resistance to dimethyl sulfoxide during mitotic cell cycle","type":"related"},{"name":"resistance to dimethyl sulfoxide during vegetative growth","type":"exact"},{"name":"resistant to dimethyl sulfoxide","type":"exact"}],"termid":"FYPO:0009047"}


id: PATO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's not being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undistributed","termid":"PATO:0001567"}


id: GO:0070137
data:
  {"annotated_genes":["SJAG_02214","SJAG_16454"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75244,106458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0140096","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like protein-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"small conjugating protein-specific endopeptidase activity","type":"exact"}],"termid":"GO:0070137","terms_by_termid":{"GO:0070139":null}}


id: FYECO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cysteine","synonyms":[{"name":"C added","type":"exact"},{"name":"Cys added","type":"exact"}],"termid":"FYECO:0000179"}


id: GO:0012507
data:
  {"annotated_genes":["SJAG_05345","SJAG_02539","SJAG_01939","SJAG_05344","SJAG_02349","SJAG_01633","SJAG_04513","SJAG_00072","SJAG_00906","SJAG_04023","SJAG_03153","SJAG_03558","SJAG_00557","SJAG_00284","SJAG_03907"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67616,70791,74244,76515,101397],"is_not":false,"summary":null,"term":"GO:0012507"},{"annotations":[77437,76848,76024,75395,75164,71721,73400,78783,71691,95842],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances from the endoplasmic reticulum to the Golgi.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"COPII-coated ER to Golgi transport vesicle","termid":"GO:0030134"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00557":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01939":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ER to Golgi transport vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030664"],"synonyms":[{"name":"COPII coated vesicle membrane","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"ER-Golgi transport vesicle membrane","type":"exact"},{"name":"endoplasmic reticulum to Golgi transport vesicle membrane","type":"exact"},{"name":"endoplasmic reticulum-Golgi transport vesicle membrane","type":"exact"}],"termid":"GO:0012507","terms_by_termid":{"GO:0012507":null,"GO:0030127":null}}


id: PBO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad25","termid":"PBO:0002121"}


id: GO:0010715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix disassembly","synonyms":[{"name":"regulation of extracellular matrix breakdown","type":"exact"},{"name":"regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010715"}


id: PBO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 3","termid":"PBO:0060828"}


id: GO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukin-2 receptor.","definition_xrefs":["PMID:10358772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-4 receptor complex","synonyms":[{"name":"IL-4 receptor complex","type":"exact"}],"termid":"GO:0016516"}


id: PBO:0066557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 20","termid":"PBO:0066557"}


id: PBO:0049439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 16","termid":"PBO:0049439"}


id: GO:0052312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of transcription in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of transcription in other organism involved in symbiotic interaction (obsolete GO:0052312)","synonyms":[{"name":"modulation of transcription in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052312"}


id: PBO:0063113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1","termid":"PBO:0063113"}


id: PBO:0028582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_salt_stress","termid":"PBO:0028582"}


id: GO:0046829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of RNA from the cytoplasm into the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of RNA import into nucleus","termid":"GO:0046828"},{"relation_name":"negatively_regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA import into nucleus","synonyms":[{"name":"down regulation of RNA import into nucleus","type":"exact"},{"name":"down-regulation of RNA import into nucleus","type":"exact"},{"name":"downregulation of RNA import into nucleus","type":"exact"},{"name":"inhibition of RNA import into nucleus","type":"narrow"},{"name":"negative regulation of RNA import into cell nucleus","type":"exact"},{"name":"negative regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"negative regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046829"}


id: MONDO:0100090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital alveolar dysplasia in which the cause of the disease is a mutation in the FGF10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital alveolar dysplasia","termid":"MONDO:0100077"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia due to FGF10","synonyms":[{"name":"CAD due to FGF10","type":"exact"}],"termid":"MONDO:0100090","xrefs":{"Monarch":{"xref_id":"0100090"}}}


id: GO:0008547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. A GTPase involved in protein synthesis. In the initiation factor complex, it is IF-2b (98 kDa) that binds GTP and subsequently hydrolyzes it in prokaryotes. In eukaryotes, it is eIF-2 (150 kDa) that binds GTP. In the elongation phase, the GTP-hydrolyzing proteins are the EF-Tu polypeptide of the prokaryotic transfer factor (43 kDa), the eukaryotic elongation factor EF-1a (53 kDa), the prokaryotic EF-G (77 kDa), the eukaryotic EF-2 (70-110 kDa) and the signal recognition particle that play a role in endoplasmic reticulum protein synthesis (325 kDa). EF-Tu and EF1a catalyze binding of aminoacyl-tRNA to the ribosomal A-site, while EF-G and EF-2 catalyze the translocation of peptidyl-tRNA from the A-site to the P-site. GTPase activity is also involved in polypeptide release from the ribosome with the aid of the pRFs and eRFs.","definition_xrefs":["EC:3.6.5.3","MetaCyc:3.6.1.48-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity (obsolete GO:0008547)","synonyms":[{"name":"protein-synthesizing GTPase activity","type":"exact"}],"termid":"GO:0008547"}


id: PBO:0028871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_tail_length","termid":"PBO:0028871"}


id: FYPO:0006913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ketoconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on ketoconazole","synonyms":[{"name":"normal cell population growth in presence of ketoconazole","type":"exact"},{"name":"normal cell population growth on ketoconazole","type":"exact"},{"name":"normal cellular response to ketoconazole","type":"related"},{"name":"normal vegetative cell population growth on ketoconazole","type":"exact"}],"termid":"FYPO:0006913"}


id: PBO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120B","termid":"PBO:0047062"}


id: MONDO:0009081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"deafness, congenital, with total albinism","secondary_identifiers":["MESH:C565646","MEDGEN:387799","OMIM:220900","UMLS:C1857343"],"synonyms":[{"name":"deafness, congenital, with total albinism","type":"exact"}],"termid":"MONDO:0009081","xrefs":{"Monarch":{"xref_id":"0009081"}}}


id: MONDO:0008382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of retinoschisis.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"retinoschisis, autosomal dominant","secondary_identifiers":["MESH:C000598640","MEDGEN:357940","GARD:9144","OMIM:180270","UMLS:C1867235"],"synonyms":[{"name":"autosomal dominant retinoschisis","type":"exact"},{"name":"retinoschisis autosomal dominant","type":"related"},{"name":"retinoschisis, autosomal dominant","type":"exact"}],"termid":"MONDO:0008382","xrefs":{"Monarch":{"xref_id":"0008382"}}}


id: PBO:0039341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALS2 C-terminal like","termid":"PBO:0039341"}


id: GO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of nucleosomes along a DNA fragment.","definition_xrefs":["PMID:12006495"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome mobilization (obsolete GO:0042766)","synonyms":[{"name":"nucleosome sliding","type":"exact"}],"termid":"GO:0042766"}


id: FYPO:0004113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, small cell","synonyms":[{"name":"inviable after spore germination, undivided small cell","type":"exact"},{"name":"inviable following spore germination, without cell division, small cell","type":"exact"},{"name":"inviable germinated spore, without cell division, small cell","type":"exact"},{"name":"lethal after spore germination, without cell division, small cell","type":"exact"}],"termid":"FYPO:0004113"}


id: GO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD63.","definition_xrefs":["PMID:7629079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA3-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0071081"}


id: PBO:0061428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 2","termid":"PBO:0061428"}


id: RO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x partially overlaps y iff there exists some z such that z is part of x and z is part of y, and it is also the case that neither x is part of y or y is part of x","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_overlaps","termid":"RO:0002151"}


id: PR:Q9URW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPJ691.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URW3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein yippee-like PJ691.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ691.02","synonyms":[{"name":"Spom972h-SPAPJ691.02","type":"exact"}],"termid":"PR:Q9URW3"}


id: PR:Q10172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup214 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein pan1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.09c","secondary_identifiers":["UniProtKB:Q10172"],"synonyms":[{"name":"SPAC25G10.09c","type":"related"},{"name":"Spom972h-NUP214","type":"exact"}],"termid":"PR:Q10172"}


id: PBO:0057427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 549a","termid":"PBO:0057427"}


id: PBO:0053310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-52 DREAM MuvB core complex component","termid":"PBO:0053310"}


id: MONDO:0017458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postaxial polydactyly of toes (obsolete MONDO:0017458)","secondary_identifiers":["SCTID:205133005","Orphanet:295008"],"synonyms":[{"name":"postaxial polydactyly of foot","type":"exact"}],"termid":"MONDO:0017458","xrefs":{"Monarch":{"xref_id":"0017458"}}}


id: PBO:0090467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd5","termid":"PBO:0090467"}


id: PBO:0030235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030235"}


id: PR:Q9C105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone deacetylase complex subunit SAP130 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase-like protein PB1E7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.04c","secondary_identifiers":["UniProtKB:Q9C105"],"synonyms":[{"name":"Spom972h-SAP130","type":"exact"}],"termid":"PR:Q9C105"}


id: GO:0010837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte proliferation","termid":"GO:0010837"}


id: GO:0010659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a cardiac muscle cell and result in its death. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["CL:0000746","GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell apoptotic process","termid":"GO:0010658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell apoptotic process","synonyms":[{"name":"cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010659"}


id: PBO:0081401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF248 antisense RNA 1","termid":"PBO:0081401"}


id: MONDO:0042973
data:
  {"annotated_genes":["SJAG_02342","SJAG_01181","SJAG_00516","SJAG_00993","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009815"},{"annotations":[85843,85844,85842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007970"},{"annotations":[86915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957262"}]},"cv_name":"mondo","definition":"An instance of osteosclerosis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosclerosis","termid":"MONDO:0002933"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01183":null,"SJAG_02342":null},"genotype_count":0,"is_obsolete":false,"name":"familial osteosclerosis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"hereditary osteosclerosis","type":"exact"}],"termid":"MONDO:0042973","terms_by_termid":{"MONDO:0007970":null,"MONDO:0009815":null,"MONDO:0957262":null},"xrefs":{"Monarch":{"xref_id":"0042973"}}}


id: MONDO:0009596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Pena type","secondary_identifiers":["MEDGEN:343289","UMLS:C1855195","MESH:C565399","OMIM:250300"],"synonyms":[{"name":"metaphyseal chondrodysplasia, Pena type","type":"exact"}],"termid":"MONDO:0009596","xrefs":{"Monarch":{"xref_id":"0009596"}}}


id: GO:0061566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into CMP, cytidine monophosphate, to produce CDP. Addition of two phosphate groups produces CTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"CMP phosphorylation","termid":"GO:0061566"}


id: PBO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 1","termid":"PBO:0047290"}


id: FYPO:0007862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromeres and kinetochores remain associated with the spindle pole body during nuclear division in a that does not form a mitotic spindle or undergo cytokinesis.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000337","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle","synonyms":[{"name":"abnormal centromere-SPB association at mitosis","type":"related"},{"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"centromere clustering at nuclear periphery during nuclear fission","type":"exact"},{"name":"chromosome SPB attachment during nuclear fission","type":"exact"}],"termid":"FYPO:0007862"}


id: PBO:0041994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC39 antisense RNA 1","termid":"PBO:0041994"}


id: PATO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's processing the form of a thin plate sheet or layer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminar","termid":"PATO:0002124"}


id: PBO:0040354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 3","termid":"PBO:0040354"}


id: GO:0036116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0006790","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036116"}


id: PBO:0043084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 4 subunit","termid":"PBO:0043084"}


id: MONDO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign breast neoplasm characterized by the proliferation of multiple papillomas within the lumen of the ducts.","definition_xrefs":["NCIT:C5201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal papillomatosis","termid":"MONDO:0021099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast papillomatosis","secondary_identifiers":["DOID:7511","MEDGEN:235224","UMLS:C1334247"],"synonyms":[{"name":"breast intraductal papillomatosis","type":"related"},{"name":"intraductal breast papillomatosis","type":"exact"},{"name":"intraductal papillomatosis of breast","type":"exact"},{"name":"intraductal papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0004253","xrefs":{"Monarch":{"xref_id":"0004253"}}}


id: PBO:0053890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1170","termid":"PBO:0053890"}


id: GO:0098545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"is_a","term_name":"maintenance of protein complex location","termid":"GO:0098544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein complex location in cytoplasm","termid":"GO:0098545"}


id: PBO:0091559
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"social distancing gene","termid":"PBO:0091559"}


id: PBO:0087381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding protein that localizes to puncta in the cortical ER; sterol binding occurs via two StART-like domains; one of six StART-like domain-containing proteins in yeast that may be involved in intracellular sterol transfer between membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087381"}


id: PBO:0028263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_queuosine_level_in_tRNA","termid":"PBO:0028263"}


id: PBO:0085936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["GOC:yaf","PMID:10662642","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: PBO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 3 pseudogene","termid":"PBO:0042628"}


id: PBO:0117274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alcohol dehydrogenase/NADH dehydrogenase Adh4","termid":"PBO:0117274"}


id: PBO:0054474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1874","termid":"PBO:0054474"}


id: PBO:0043923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 2","termid":"PBO:0043923"}


id: MONDO:0010763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"partial chromosome Y deletion","termid":"MONDO:0015607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, Y-linked, 1","secondary_identifiers":["UMLS:C4551960","DOID:0070186","GARD:18503","MEDGEN:1634798","OMIM:400042"],"synonyms":[{"name":"SPGFY1","type":"related"},{"name":"Sertoli cell-only syndrome, Y-linked","type":"related"},{"name":"Sertoli cell-only syndrome, type 1","type":"related"},{"name":"Sertoli cell-only syndrome, type 2","type":"related"},{"name":"hypospermatogenesis","type":"related"},{"name":"incomplete Sertoli cell-only syndrome","type":"related"},{"name":"spermatogenic failure, Y-linked, 1","type":"exact"},{"name":"spermatogenic failure, Y-linked, 1, Y-linked","type":"exact"},{"name":"spermatogenic failure, Y-linked, type 1","type":"exact"}],"termid":"MONDO:0010763","xrefs":{"Monarch":{"xref_id":"0010763"}}}


id: PBO:0005636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase Pps1","termid":"PBO:0005636"}


id: GO:0050241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + NAD(P)+ = 1-pyrroline-2-carboxylate + NAD(P)H + H+.","definition_xrefs":["MetaCyc:PYRROLINE-2-CARBOXYLATE-REDUCTASE-RXN","EC:1.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyrroline-2-carboxylate reductase activity","synonyms":[{"name":"L-proline:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"delta1-pyrroline-2-carboxylate reductase activity","type":"related"}],"termid":"GO:0050241"}


id: PBO:0050529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin like 1","termid":"PBO:0050529"}


id: GO:0072388
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"flavin adenine dinucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"FAD or FADH2 biosynthetic process","type":"exact"},{"name":"flavin adenine dinucleotide anabolism","type":"exact"},{"name":"flavin adenine dinucleotide biosynthesis","type":"exact"},{"name":"flavin adenine dinucleotide formation","type":"exact"},{"name":"flavin adenine dinucleotide synthesis","type":"exact"}],"termid":"GO:0072388","terms_by_termid":{"GO:0006747":null}}


id: PBO:0070038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1335, pseudogene","termid":"PBO:0070038"}


id: GO:1900294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of heptasaccharide transport","termid":"GO:1900294"}


id: FYECO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which formamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ formamide","termid":"FYECO:0000329"}


id: PBO:0071009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 11","termid":"PBO:0071009"}


id: GO:0009384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate.","definition_xrefs":["EC:2.7.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"N-acylmannosamine kinase activity","secondary_identifiers":["Reactome:R-HSA-4088322","Reactome:R-HSA-4085028","MetaCyc:N-ACYLMANNOSAMINE-KINASE-RXN","RHEA:23832"],"synonyms":[{"name":"ATP:N-acetylmannosamine 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acyl-D-mannosamine 6-phosphotransferase activity","type":"related"},{"name":"N-acetylmannosamine kinase activity","type":"related"},{"name":"N-acyl-D-mannosamine kinase activity","type":"related"},{"name":"acetylamidodeoxymannokinase activity","type":"related"},{"name":"acetylmannosamine kinase activity","type":"related"},{"name":"acylaminodeoxymannokinase activity","type":"related"},{"name":"acylmannosamine kinase (phosphorylating)","type":"related"},{"name":"acylmannosamine kinase activity","type":"related"}],"termid":"GO:0009384"}


id: GO:0019015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The whole of the genetic information of a virus, contained as either DNA or RNA.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete viral genome (obsolete GO:0019015)","termid":"GO:0019015"}


id: GO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of phosphorylation","termid":"GO:0042326"},{"relation_name":"negatively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein phosphorylation","synonyms":[{"name":"down regulation of protein amino acid phosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"downregulation of protein amino acid phosphorylation","type":"exact"},{"name":"inhibition of protein amino acid phosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001933"}


id: PBO:0043109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin target of PRMT1","termid":"PBO:0043109"}


id: MONDO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 27","secondary_identifiers":["MEDGEN:1672866","OMIM:618369","UMLS:C5193058","DOID:0111616"],"synonyms":[{"name":"SCAR27","type":"related"},{"name":"SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 27","type":"related"}],"termid":"MONDO:0032706","xrefs":{"Monarch":{"xref_id":"0032706"}}}


id: GO:0102949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoorientin + an L-rhamonsylated rhamnosyl acceptor = isoorientin 2'-O-rhamnoside + a non rhamnosylated rhamnosyl acceptor.","definition_xrefs":["PMID:15220389","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,2-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9082"],"termid":"GO:0102949"}


id: PBO:0070304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 10","termid":"PBO:0070304"}


id: MONDO:0015401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maxillary arteriovenous malformation is a rare vascular anomaly characterized by an abnormal connection of the arterial and venous vasculature, without capillary connections, in the maxillofacial area, usually presenting with chronic, intermittent, and potentially life-threatening, hemorrhage. Association with infection, pain, pressure, pulsation, swelling, facial asymmetry, headache, ocular pain, tinnitus, otalgia, epistaxis, toothache and/or teeth mobility and compressibility into their sockets is possible, although it may also be asymptomatic.","definition_xrefs":["Orphanet:141171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary arteriovenous malformation","secondary_identifiers":["UMLS:C3839810","icd11.foundation:1755286955","GARD:19956","MEDGEN:825655","SCTID:703335004"],"synonyms":[{"name":"arteriovenous malformation of maxilla","type":"exact"}],"termid":"MONDO:0015401","xrefs":{"Monarch":{"xref_id":"0015401"}}}


id: GO:0098593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cup shaped specialization of the cytoskeleton that forms a thin layer located just below the apical mass of mature mucin secretory granules in the cytoplasm of goblet cells of the intestinal epithelium. It consists of an orderly network of intermediate filaments and microtubules. Microtubules are arranged vertically, like barrel staves, along the inner aspect of the theta. Intermediate filaments form two networks: an inner, basketlike network and an outer series of circumferential bundles resembling the hoops of a barrel.","definition_xrefs":["PMID:6541604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"goblet cell theca","termid":"GO:0098593"}


id: PBO:0058198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4491","termid":"PBO:0058198"}


id: PBO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase subunit Emi5 (predicted)","termid":"PBO:0002591"}


id: MONDO:0012924
data:
  {"annotated_genes":["SJAG_04204","SJAG_04168"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87108,87109],"is_not":false,"summary":null,"term":"MONDO:0012924"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04168":null,"SJAG_04204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:393906","GARD:15561","MESH:C567281","NCIT:C176913","OMIM:612527","UMLS:C2675860","DOID:0111890"],"synonyms":[{"name":"DBA4","type":"related"},{"name":"Diamond-Blackfan Anaemia type 4","type":"exact"},{"name":"Diamond-Blackfan Anemia type 4","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS17","type":"exact"},{"name":"Diamond-Blackfan anemia 4","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS17","type":"exact"},{"name":"RPS17 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS17 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0012924","terms_by_termid":{"MONDO:0012924":null},"xrefs":{"Monarch":{"xref_id":"0012924"}}}


id: PBO:0043112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"churchill domain containing 1","termid":"PBO:0043112"}


id: GO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent alteration of a histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone modification (obsolete GO:0031058)","synonyms":[{"name":"activation of histone modification","type":"narrow"},{"name":"stimulation of histone modification","type":"narrow"},{"name":"up regulation of histone modification","type":"exact"},{"name":"up-regulation of histone modification","type":"exact"},{"name":"upregulation of histone modification","type":"exact"}],"termid":"GO:0031058"}


id: PBO:0083040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the oligosaccharyl transferase glycoprotein complex; complex is required for N-linked glycosylation of proteins in the endoplasmic reticulum","termid":"PBO:0083040"}


id: MONDO:0008820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arthrogryposis, distal, with hypopituitarism, intellectual disability, and facial anomalies (obsolete MONDO:0008820)","termid":"MONDO:0008820","xrefs":{"Monarch":{"xref_id":"0008820"}}}


id: MOD:00975
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3'-chlorotyrosine","termid":"MOD:00975"}


id: PBO:0004291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin","termid":"PBO:0004291"}


id: MONDO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","synonyms":[{"name":"primary osteodysplasia with disorganized development of skeletal components","type":"related"},{"name":"primary skeletal dysplasia with disorganized development of skeletal components","type":"related"}],"termid":"MONDO:0019708","xrefs":{"Monarch":{"xref_id":"0019708"}}}


id: MONDO:0016289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the uterine cervix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant germ cell tumor of cervix uteri","secondary_identifiers":["UMLS:C4750752","GARD:20501","MEDGEN:1662294","ICD10CM:C53.0","Orphanet:213837"],"synonyms":[{"name":"cervical germ cell cancer","type":"exact"},{"name":"cervical malignant germ cell tumor","type":"exact"},{"name":"cervical malignant germ cell tumour","type":"exact"},{"name":"germ cell cancer of cervix uteri","type":"exact"},{"name":"germ cell cancer of the cervix uteri","type":"exact"},{"name":"malignant germ cell tumor of the cervix uteri","type":"related"},{"name":"malignant germ cell tumour of the cervix uteri","type":"related"},{"name":"uterine cervix malignant germ cell tumor","type":"exact"},{"name":"uterine cervix malignant germ cell tumour","type":"exact"}],"termid":"MONDO:0016289","xrefs":{"Monarch":{"xref_id":"0016289"}}}


id: MONDO:0100109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition comprising a triad of unilateral renal agenesis, ipsilateral seminal vesicle obstruction and ipsilateral ejaculatory duct obstruction.","definition_xrefs":["PMID:30258511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinner syndrome","termid":"MONDO:0100109","xrefs":{"Monarch":{"xref_id":"0100109"}}}


id: MONDO:0100221
data:
  {"annotated_genes":["SJAG_02326","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86216,86217],"is_not":false,"summary":null,"term":"MONDO:0100221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1763502","GARD:16402","OMIM:619016","UMLS:C5436607"],"synonyms":[{"name":"IFAP SYNDROME 2","type":"exact"},{"name":"IFAP2","type":"exact"},{"name":"ichthyosis , follicular, with atrichia and photophobia syndrome 2","type":"exact"},{"name":"ichthyosis follicularis, atrichia, and photophobia syndrome 2","type":"exact"}],"termid":"MONDO:0100221","terms_by_termid":{"MONDO:0100221":null},"xrefs":{"Monarch":{"xref_id":"0100221"}}}


id: PBO:0042091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 160","termid":"PBO:0042091"}


id: PBO:0108701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp1","termid":"PBO:0108701"}


id: MONDO:0013789
data:
  {"annotated_genes":["SJAG_01069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86780],"is_not":false,"summary":null,"term":"MONDO:0013789"}]},"cv_name":"mondo","definition":"DDOST-CDG is a form of congenital disorders of N-linked glycosylation characterized by failure to thrive, developmental delay, hypotonia, strabismus and hepatic dysfunction. The disease is caused by mutations in the gene DDOST (1p36.1).","definition_xrefs":["Orphanet:300536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"DDOST-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080569","GARD:12398","OMIM:614507","UMLS:C3281084","MEDGEN:482714","SCTID:733083006"],"synonyms":[{"name":"CDG syndrome type Ir","type":"exact"},{"name":"CDG-Ir","type":"exact"},{"name":"CDG1R","type":"exact"},{"name":"DDOST-CDG","type":"exact"},{"name":"DDOST-CDG (CDG-Ir)","type":"related"},{"name":"DDOST-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Ir","type":"exact"},{"name":"congenital disorder of glycosylation type 1r","type":"exact"},{"name":"congenital disorder of glycosylation type Ir","type":"exact"},{"name":"congenital disorder of glycosylation, type Ir","type":"related"}],"termid":"MONDO:0013789","terms_by_termid":{"MONDO:0013789":null},"xrefs":{"Monarch":{"xref_id":"0013789"}}}


id: PBO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 77","termid":"PBO:0042020"}


id: PBO:0002830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar serine protease Psp3 (predicted)","termid":"PBO:0002830"}


id: GO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[protein] + L-lysyl-[protein] = [protein]-L-lysyl-N(6)-5-L-glutamyl-[protein] + NH4+. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links.","definition_xrefs":["EC:2.3.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"protein-glutamine gamma-glutamyltransferase activity","secondary_identifiers":["Reactome:R-HSA-140851","RESID:AA0124","MetaCyc:2.3.2.13-RXN","RHEA:54816","Reactome:R-HSA-6810894"],"synonyms":[{"name":"R-glutaminyl-peptide:amine gamma-glutamyl transferase activity","type":"related"},{"name":"TGase activity","type":"exact"},{"name":"factor XIIIa","type":"related"},{"name":"fibrin stabilizing factor","type":"related"},{"name":"fibrinoligase activity","type":"exact"},{"name":"glutaminylpeptide gamma-glutamyltransferase activity","type":"related"},{"name":"polyamine transglutaminase activity","type":"related"},{"name":"protein-glutamine:amine gamma-glutamyltransferase","type":"related"},{"name":"tissue transglutaminase","type":"narrow"},{"name":"transglutaminase activity","type":"exact"}],"termid":"GO:0003810"}


id: PBO:0070436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A","termid":"PBO:0070436"}


id: PBO:0055938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 45","termid":"PBO:0055938"}


id: FYPO:0001484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chemical response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to a nutrient is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to nutrient","synonyms":[{"name":"abnormal cellular response to nutrient during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to nutrient during vegetative growth","type":"exact"}],"termid":"FYPO:0001484"}


id: PATO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by high-crowned teeth and enamel which extends far past the gum line, which provides extra material for wear and tear.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypsodont","termid":"PATO:0005007"}


id: PBO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 33, pseudogene","termid":"PBO:0044454"}


id: PBO:0029294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus","termid":"PBO:0029294"}


id: PBO:0062552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily Q member 2","termid":"PBO:0062552"}


id: PBO:0047450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor and transporter","termid":"PBO:0047450"}


id: MONDO:0011441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complex regional pain syndrome type 1 (CRPS1) is a form of complex regional pain syndrome in which the pain is disproportionate to any known inciting event and is characterized by continuous pain, allodynia, or hyperalgesia as well as edema, coloration (changes in skin blood flow), or abnormal sudomotor activity in the region of pain. Onset of CRPS1 symptoms may occur within a few days to a month after an injury or trauma to the affected limb.","definition_xrefs":["Orphanet:99995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"complex regional pain syndrome","termid":"MONDO:0019369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex regional pain syndrome type 1","secondary_identifiers":["NCIT:C85042","ICD9:733.7","OMIM:604335","SCTID:50642008","EFO:1001147","ICD9:337.20","DOID:1811","MedDRA:10064334","MESH:D012019","GARD:16928","UMLS:C0034931","ICD10CM:M89.0","ICD9:337.2","ICD9:337.21","MedDRA:10038249","MEDGEN:11159","ICD9:337.29"],"synonyms":[{"name":"Algodystrophy","type":"exact"},{"name":"CRPS I","type":"exact"},{"name":"CRPS1","type":"exact"},{"name":"Complex regional pain syndrome I","type":"exact"},{"name":"RND","type":"exact"},{"name":"RSDS","type":"exact"},{"name":"complex regional pain syndrome type 1","type":"exact"},{"name":"reflex neurovascular dystrophy","type":"exact"},{"name":"reflex sympathetic dystrophy","type":"exact"},{"name":"reflex sympathetic dystrophy syndrome","type":"exact"}],"termid":"MONDO:0011441","xrefs":{"Monarch":{"xref_id":"0011441"}}}


id: GO:0032443
data:
  {"annotated_genes":["SJAG_02044","SJAG_04018","SJAG_02104","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88905,106165],"is_not":false,"summary":null,"term":"GO:0032443"},{"annotations":[94221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[110160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032443","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: GO:0004452
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75060],"is_not":false,"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.","definition_xrefs":["RHEA:23284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.3.3.2","KEGG_REACTION:R01123","MetaCyc:IPPISOM-RXN","Reactome:R-HSA-191382"],"synonyms":[{"name":"IPP isomerase activity","type":"related"},{"name":"isopentenyl-diphosphate D-isomerase activity","type":"exact"},{"name":"isopentenyl-diphosphate delta3-delta2-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate delta-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate isomerase activity","type":"related"},{"name":"methylbutenylpyrophosphate isomerase activity","type":"related"}],"termid":"GO:0004452","terms_by_termid":{"GO:0004452":null}}


id: MONDO:0005992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete trichinosis (obsolete MONDO:0005992)","termid":"MONDO:0005992","xrefs":{"Monarch":{"xref_id":"0005992"}}}


id: PBO:0083198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene LDB7/YBL006C","termid":"PBO:0083198"}


id: GO:0048334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"}


id: SO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A haplotype is one of a set of coexisting sequence variants of a haplotype block.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"haplotype_block","termid":"SO:0000355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haplotype","secondary_identifiers":["http://en.wikipedia.org/wiki/Haplotype"],"termid":"SO:0001024"}


id: MONDO:0017119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with microcephaly as major feature (obsolete MONDO:0017119)","secondary_identifiers":["icd11.foundation:2011102370","Orphanet:269528"],"termid":"MONDO:0017119","xrefs":{"Monarch":{"xref_id":"0017119"}}}


id: MONDO:1011209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited disorder affecting the structure, composition, and quantity of tooth enamel in dogs due to a variation in the ACP4 gene.","definition_xrefs":["PMID:30877375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, ACP4-related, dog","secondary_identifiers":["OMIA:002177-9615"],"termid":"MONDO:1011209","xrefs":{"Monarch":{"xref_id":"1011209"}}}


id: GO:1901461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"negatively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to formic acid","synonyms":[{"name":"down regulation of response to formic acid","type":"exact"},{"name":"down-regulation of response to formic acid","type":"exact"},{"name":"downregulation of response to formic acid","type":"exact"},{"name":"inhibition of response to formic acid","type":"narrow"}],"termid":"GO:1901461"}


id: PBO:0116708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily H member 1 pseudogene (gene/pseudogene)","termid":"PBO:0116708"}


id: MONDO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 12","secondary_identifiers":["OMIM:619825","MEDGEN:1802657","UMLS:C5676959"],"synonyms":[{"name":"AAT12","type":"exact"},{"name":"aortic aneurysm, familial thoracic 12","type":"exact"}],"termid":"MONDO:0030731","xrefs":{"Monarch":{"xref_id":"0030731"}}}


id: MONDO:0013160
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87016,87017],"is_not":false,"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited congenital muscular dystrophy caused by mutations in the POMT2 gene. It is characterized by mental retardation and mild structural brain abnormalities resulting from defective glycosylation of alpha-dystroglycan.","definition_xrefs":["NCIT:C126690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMT2","termid":"MONDO:0700071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0024322","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613156","UMLS:C3150416","MEDGEN:461766","DOID:0112380"],"synonyms":[{"name":"MDDGB2","type":"related"},{"name":"congenital muscular dystrophy-POMT2 related","type":"exact"},{"name":"congenital muscular dystrophy-dystroglycanopathy with intellectual disability type B2","type":"exact"},{"name":"congenital muscular dystrophy-dystroglycanopathy with mental retardation type B2","type":"exact"},{"name":"muscular dystrophy, congenital, Pomt2-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B, 2","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type B, 2","type":"related"}],"termid":"MONDO:0013160","terms_by_termid":{"MONDO:0013160":null},"xrefs":{"Monarch":{"xref_id":"0013160"}}}


id: PBO:0090715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer zeta subunit","termid":"PBO:0090715"}


id: PBO:0038691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 2","termid":"PBO:0038691"}


id: GO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deoxynucleotide, a deoxyribonucleoside in ester linkage to phosphate, commonly at the 5' position of deoxyribose, into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"deoxynucleotide transport","termid":"GO:0030302"}


id: MONDO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple symmetrical lipomatosis (obsolete MONDO:0002521)","termid":"MONDO:0002521","xrefs":{"Monarch":{"xref_id":"0002521"}}}


id: MONDO:0019893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 19p13.3 is a rare chromosomal anomaly associated with a wide range of phenotypic features depending on the size of the deletion. It may present with intrauterine growth retardation, failure to thrive, global developmental delay, dysmorphic features (such as broad forehead, midface retrusion, broad nasal bridge, micrognathia, smooth philtrum, low-set, dysplastic ears), congenital anomalies (such as atrial septal defect, gastrointestinal anomalies, renal and urogenital malformations, agenesis of the corpus callosum) and other clinical features (such as hearing loss, visual impairment and immune dysregulation).","definition_xrefs":["Orphanet:96129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 19","termid":"MONDO:0016897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 19p13.3","secondary_identifiers":["GARD:19326","MEDGEN:1665859","UMLS:C4749277"],"synonyms":[{"name":"distal deletion 19p","type":"exact"},{"name":"telomeric deletion 19p","type":"exact"}],"termid":"MONDO:0019893","xrefs":{"Monarch":{"xref_id":"0019893"}}}


id: PBO:0025510
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosemia","termid":"PBO:0025510"}


id: GO:1990224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-ribonucleotide (NMN-) + H2O = beta-nicotinamide D-riboside (nicotinamide ribose, NmR) + phosphate.","definition_xrefs":["PMID:21349851","GOC:rb","RHEA:30815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"NMN phosphatase activity","synonyms":[{"name":"beta-nicotinamide D-ribonucleotide phosphatase activity","type":"exact"},{"name":"nicotinamide mononucleotide phosphatase activity","type":"exact"}],"termid":"GO:1990224"}


id: GO:0075136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host","synonyms":[{"name":"response of symbiont to host","type":"related"}],"termid":"GO:0075136"}


id: MONDO:0013236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the PALB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"PALB2-related cancer predisposition","termid":"MONDO:0700272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 3","secondary_identifiers":["OMIM:613348","UMLS:C3150547","MEDGEN:461897"],"synonyms":[{"name":"PALB2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca3","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in PALB2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 3","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to pancreatic cancer 3","type":"related"}],"termid":"MONDO:0013236","xrefs":{"Monarch":{"xref_id":"0013236"}}}


id: GO:1901582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901582)","synonyms":[{"name":"activation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"activation of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"positive regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:1901582"}


id: PBO:0038658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrosin","termid":"PBO:0038658"}


id: PBO:0079632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 2","termid":"PBO:0079632"}


id: MONDO:0021483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the frontal sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"frontal sinus neoplasm","termid":"MONDO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of frontal sinus","secondary_identifiers":["NCIT:C4420","SCTID:92115005","UMLS:C0345674","MEDGEN:87510","icd11.foundation:399551439","ICD9:212.0"],"synonyms":[{"name":"benign frontal sinus neoplasm","type":"exact"},{"name":"benign frontal sinus tumor","type":"exact"},{"name":"benign frontal sinus tumour","type":"exact"},{"name":"benign neoplasm of the frontal sinus","type":"exact"},{"name":"benign tumor of frontal sinus","type":"exact"},{"name":"benign tumor of the frontal sinus","type":"exact"},{"name":"benign tumour of frontal sinus","type":"exact"},{"name":"benign tumour of the frontal sinus","type":"exact"},{"name":"frontal sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021483","xrefs":{"Monarch":{"xref_id":"0021483"}}}


id: GO:0019627
data:
  {"annotated_genes":["SJAG_02766","SJAG_04679","SJAG_04577","SJAG_01461","SJAG_00392","SJAG_00412","SJAG_04896","SJAG_01019","SJAG_00035","SJAG_05338","SJAG_04299","SJAG_03398","SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95755,97153,114374],"is_not":false,"summary":null,"term":"GO:0019627"},{"annotations":[58994,65722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043419"},{"annotations":[98495,57801,70878,118689,103764,92798,111392,106838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000050"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving urea, the water soluble compound O=C-(NH2)2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_02766":null,"SJAG_03398":null,"SJAG_04299":null,"SJAG_04577":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0008150","GO:0071941","GO:0044281"],"is_obsolete":false,"name":"urea metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"urea metabolism","type":"exact"}],"termid":"GO:0019627","terms_by_termid":{"GO:0000050":null,"GO:0019627":null,"GO:0043419":null}}


id: GO:0046079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUMP, deoxyuridine (5'-)monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009178"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dUMP catabolic process","synonyms":[{"name":"dUMP breakdown","type":"exact"},{"name":"dUMP catabolism","type":"exact"},{"name":"dUMP degradation","type":"exact"}],"termid":"GO:0046079"}


id: MONDO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short rib-polydactyly syndrome type 5 (obsolete MONDO:0044680)","termid":"MONDO:0044680","xrefs":{"Monarch":{"xref_id":"0044680"}}}


id: GO:1904078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:24530842","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"regulation of estrogen biosynthetic process","termid":"GO:1904076"},{"relation_name":"positively_regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of estrogen biosynthetic process","synonyms":[{"name":"activation of estrogen anabolism","type":"narrow"},{"name":"activation of estrogen biosynthesis","type":"narrow"},{"name":"activation of estrogen biosynthetic process","type":"narrow"},{"name":"activation of estrogen formation","type":"narrow"},{"name":"activation of estrogen synthesis","type":"narrow"},{"name":"activation of oestrogen biosynthesis","type":"narrow"},{"name":"activation of oestrogen biosynthetic process","type":"narrow"},{"name":"positive regulation of estrogen anabolism","type":"exact"},{"name":"positive regulation of estrogen biosynthesis","type":"exact"},{"name":"positive regulation of estrogen formation","type":"exact"},{"name":"positive regulation of estrogen synthesis","type":"exact"},{"name":"positive regulation of oestrogen biosynthesis","type":"exact"},{"name":"positive regulation of oestrogen biosynthetic process","type":"exact"},{"name":"up regulation of estrogen anabolism","type":"exact"},{"name":"up regulation of estrogen biosynthesis","type":"exact"},{"name":"up regulation of estrogen biosynthetic process","type":"exact"},{"name":"up regulation of estrogen formation","type":"exact"},{"name":"up regulation of estrogen synthesis","type":"exact"},{"name":"up regulation of oestrogen biosynthesis","type":"exact"},{"name":"up regulation of oestrogen biosynthetic process","type":"exact"},{"name":"up-regulation of estrogen anabolism","type":"exact"},{"name":"up-regulation of estrogen biosynthesis","type":"exact"},{"name":"up-regulation of estrogen biosynthetic process","type":"exact"},{"name":"up-regulation of estrogen formation","type":"exact"},{"name":"up-regulation of estrogen synthesis","type":"exact"},{"name":"up-regulation of oestrogen biosynthesis","type":"exact"},{"name":"up-regulation of oestrogen biosynthetic process","type":"exact"},{"name":"upregulation of estrogen anabolism","type":"exact"},{"name":"upregulation of estrogen biosynthesis","type":"exact"},{"name":"upregulation of estrogen biosynthetic process","type":"exact"},{"name":"upregulation of estrogen formation","type":"exact"},{"name":"upregulation of estrogen synthesis","type":"exact"},{"name":"upregulation of oestrogen biosynthesis","type":"exact"},{"name":"upregulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904078"}


id: PBO:0058718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6846","termid":"PBO:0058718"}


id: GO:0097591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibrillar repetitive structure surrounding the ventral disc edge in Giardia species (trophozoite stage). The composition of the lateral crest is not fully known yet.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc lateral crest","synonyms":[{"name":"lateral crest","type":"broad"},{"name":"ventral disk lateral crest","type":"related"}],"termid":"GO:0097591"}


id: GO:0009679
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexose(out) + H+(out) = hexose(in) + H+(in).","definition_xrefs":["TC:2.A.1.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"hexose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009679","terms_by_termid":{"GO:0005358":null}}


id: PBO:0050996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 3","termid":"PBO:0050996"}


id: FYPO:0002847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the proteasome is lower than normal.","definition_xrefs":["PomBase:mah","PMID:22906049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level in proteasome","synonyms":[{"name":"decreased proteasomal protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in proteasome during mitotic cell cycle","type":"related"},{"name":"decreased protein level in proteasome during vegetative growth","type":"exact"},{"name":"reduced protein level in proteasome","type":"exact"}],"termid":"FYPO:0002847"}


id: SO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift variant that causes the translational reading frame to be shortened relative to the reference feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_truncation","synonyms":[{"name":"ANNOVAR:frameshift deletion","type":"exact"},{"name":"Jannovar:frameshift_truncation","type":"exact"},{"name":"frameshift truncation","type":"exact"}],"termid":"SO:0001910"}


id: PBO:0080883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 3","termid":"PBO:0080883"}


id: PBO:0005565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylornithine aminotransferase","termid":"PBO:0005565"}


id: MONDO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoidosis that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurosarcoidosis","secondary_identifiers":["MEDGEN:97948","MESH:C535814","SCTID:230193008","UMLS:C0393485","icd11.foundation:1479285656"],"synonyms":[{"name":"nervous system sarcoidosis","type":"exact"},{"name":"neurosarcoidosis","type":"exact"},{"name":"sarcoidosis of nervous system","type":"exact"}],"termid":"MONDO:0045047","xrefs":{"Monarch":{"xref_id":"0045047"}}}


id: PBO:0088586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytosine-mismatch binding protein 1, candidate TFAM ortholog","termid":"PBO:0088586"}


id: PR:P41390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amidophosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02227","PRO:DNx","PANTHER:PTHR11907:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.08c","secondary_identifiers":["UniProtKB:P41390"],"synonyms":[{"name":"ATase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPAT","type":"exact"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41390"}


id: PBO:0077183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 7","termid":"PBO:0077183"}


id: PBO:0113334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may contain a lipid attachment site; localizes to cytosol, and to peroxisomes in oleate-growing cells; YMR158C-A is not an essential gene","termid":"PBO:0113334"}


id: PATO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern inhering in a surface by virtue of the bearer's being marked by the presence of dots, punctures, points or pits.","definition_xrefs":["medical-dictionary:medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"punctate","synonyms":[{"name":"dotted","type":"related"},{"name":"spotted","type":"related"},{"name":"stippled","type":"related"}],"termid":"PATO:0001512"}


id: PBO:0083539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YIP4/YGL198W","termid":"PBO:0083539"}


id: MONDO:0018567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy, Okinawa type","termid":"MONDO:0011468"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to TFG mutation","secondary_identifiers":["Orphanet:435819","GARD:21815","UMLS:C5569028","MEDGEN:1800451"],"synonyms":[{"name":"CMT2 due to TFG mutation","type":"exact"}],"termid":"MONDO:0018567","xrefs":{"Monarch":{"xref_id":"0018567"}}}


id: GO:0140087
data:
  {"annotated_genes":["SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101188],"is_not":false,"summary":null,"term":"GO:0140087"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + NAD+ + H2O = acetate + NADH + 2 H+.","definition_xrefs":["PMID:9473035","RHEA:25294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140087","terms_by_termid":{"GO:0140087":null}}


id: PBO:0053645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 693","termid":"PBO:0053645"}


id: GO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"granzyme A production","termid":"GO:0035746"}


id: PBO:0073714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 1","termid":"PBO:0073714"}


id: PBO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 7","termid":"PBO:0052715"}


id: PBO:0051731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4","termid":"PBO:0051731"}


id: PBO:0055907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 31","termid":"PBO:0055907"}


id: PBO:0079304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2","termid":"PBO:0079304"}


id: GO:0006439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Hydrolysis of the peptidyl-tRNA by aminoacyl-tRNA hydrolase upon termination of translation. Analogous to usual peptidyl transfer during elongation, except that the acceptor is H2O instead of an aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoacyl-tRNA hydrolase reaction (obsolete GO:0006439)","synonyms":[{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"}],"termid":"GO:0006439"}


id: MONDO:0013927
data:
  {"annotated_genes":["SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87572],"is_not":false,"summary":null,"term":"MONDO:0013927"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 3A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C566633","GARD:15858","NCIT:C155752","OMIM:614859","UMLS:C3553929","DOID:0080478","MEDGEN:766843"],"synonyms":[{"name":"PBD3A","type":"related"},{"name":"peroxisome biogenesis disorder 3A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 3","type":"related"}],"termid":"MONDO:0013927","terms_by_termid":{"MONDO:0013927":null},"xrefs":{"Monarch":{"xref_id":"0013927"}}}


id: GO:0032820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"regulation of NK cell proliferation during immune response","type":"related"},{"name":"regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032820"}


id: MONDO:0024354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by cytomegalovirus. Most humans are exposed to cytomegalovirus. Healthy individuals do not develop signs and symptoms of infection. Patients with weakened immune system (e.g., AIDS patients, cancer patients who are being treated with chemotherapy, and patients who have received bone marrow or solid organ transplants) develop signs and symptoms of infection. They include cough, shortness of breath, fatigue, malaise, fever, muscle and joint pain, and excessive sweating.","definition_xrefs":["NCIT:C35360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"viral pneumonia","termid":"MONDO:0006012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytomegalovirus pneumonia","secondary_identifiers":["SCTID:7678002","MEDGEN:124443","UMLS:C0276253"],"synonyms":[{"name":"CMV pneumonia","type":"exact"},{"name":"Cytomegaloviral pneumonia","type":"exact"},{"name":"Cytomegalovirus caused pneumonia","type":"exact"},{"name":"Cytomegalovirus pneumonia","type":"exact"},{"name":"cytomegalovirus pneumonia","type":"exact"}],"termid":"MONDO:0024354","xrefs":{"Monarch":{"xref_id":"0024354"}}}


id: MONDO:0015466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cranio-osteoarthropathy (COA) is a form of primary hypertrophic osteoarthropathy characterized by delayed closure of the cranial sutures and fontanels, digital clubbing, arthropathy, and periostosis.","definition_xrefs":["Orphanet:1525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypertrophic osteoarthropathy","termid":"MONDO:0016620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranio-osteoarthropathy","secondary_identifiers":["MEDGEN:394824","icd11.foundation:225223076","SCTID:720753002","GARD:1564","UMLS:C2678439"],"synonyms":[{"name":"Currarino disease","type":"exact"},{"name":"Currarino idiopathic osteoarthropathy","type":"exact"},{"name":"Reginato-Schiapachasse syndrome","type":"exact"},{"name":"cranio osteoarthropathy","type":"related"}],"termid":"MONDO:0015466","xrefs":{"Monarch":{"xref_id":"0015466"}}}


id: GO:0102723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + curcumin = curcumin monoglucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:curcumin glucosyltransferase activity (obsolete GO:0102723)","termid":"GO:0102723"}


id: MONDO:1010504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, domestic cat","secondary_identifiers":["OMIA:001803-9685"],"termid":"MONDO:1010504","xrefs":{"Monarch":{"xref_id":"1010504"}}}


id: PBO:0074399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 8","termid":"PBO:0074399"}


id: MONDO:0019434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic-onset juvenile idiopathic arthritis is marked by the severity of the extra-articular manifestations (fever, cutaneous eruptions) and by an equal sex ratio.","definition_xrefs":["Orphanet:85414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic-onset juvenile idiopathic arthritis","secondary_identifiers":["NCIT:C119031","MEDGEN:346934","NANDO:1200470","EFO:1001999","SCTID:201796004","UMLS:C1858558","MESH:C565798","icd11.foundation:504387587","NANDO:2201055","GARD:10966"],"synonyms":[{"name":"SoJIA","type":"exact"},{"name":"Still disease","type":"exact"},{"name":"Still's disease (formerly)","type":"related"},{"name":"sJIA","type":"exact"},{"name":"systemic juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile rheumatoid arthritis","type":"related"},{"name":"systemic polyarthritis","type":"exact"},{"name":"systemic-onset JIA","type":"exact"}],"termid":"MONDO:0019434","xrefs":{"Monarch":{"xref_id":"0019434"}}}


id: SO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A three prime RACE (Rapid Amplification of cDNA Ends) clone is a cDNA clone copied from the 3' end of an mRNA (using a poly-dT primer to capture the polyA tail and a gene-specific or randomly primed 5' primer), and spliced into a vector for propagation in a suitable host.","definition_xrefs":["modENCODE:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_RACE_clone","synonyms":[{"name":"3' RACE clone","type":"related"}],"termid":"SO:0001433"}


id: PBO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation","termid":"PBO:0030848"}


id: PBO:0026850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_rRNA_gene","termid":"PBO:0026850"}


id: MONDO:0957284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 5C, autosomal dominant","secondary_identifiers":["MEDGEN:1841185","UMLS:C5830549","OMIM:620389","DOID:0081375"],"termid":"MONDO:0957284","xrefs":{"Monarch":{"xref_id":"0957284"}}}


id: PR:Q9USG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosyl-DNA phosphodiesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04352","PANTHER:PTHR12415:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.05","secondary_identifiers":["UniProtKB:Q9USG9"],"synonyms":[{"name":"Spom972h-TDP1","type":"exact"},{"name":"Tyr-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USG9"}


id: PBO:0069714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 994, pseudogene","termid":"PBO:0069714"}


id: PBO:0040393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 1","termid":"PBO:0040393"}


id: GO:0050385
data:
  {"annotated_genes":["SJAG_05287"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74700],"is_not":false,"summary":null,"term":"GO:0050385"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-ureidoglycolate = glyoxylate + urea.","definition_xrefs":["RHEA:11304","EC:4.3.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ureidoglycolate lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00776","MetaCyc:UREIDOGLYCOLATE-LYASE-RXN"],"synonyms":[{"name":"(S)-ureidoglycolate urea-lyase (glyoxylate-forming)","type":"related"},{"name":"(S)-ureidoglycolate urea-lyase activity","type":"related"},{"name":"ureidoglycolase activity","type":"related"},{"name":"ureidoglycolatase activity","type":"related"},{"name":"ureidoglycolate hydrolase activity","type":"related"}],"termid":"GO:0050385","terms_by_termid":{"GO:0050385":null}}


id: GO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-3'-DNA)-L-tyrosine.","definition_xrefs":["RESID:AA0323"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via the 3'-end to peptidyl-tyrosine (obsolete GO:0045326)","synonyms":[{"name":"DNA-protein covalent cross-linking via the 3'-end to peptidyl-tyrosine","type":"exact"}],"termid":"GO:0045326"}


id: PBO:0039871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 29","termid":"PBO:0039871"}


id: GO:0047498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate. This reaction requires Ca2+.","definition_xrefs":["PMID:34831185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase A2 activity","termid":"GO:0004623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"calcium-dependent phospholipase A2 activity","secondary_identifiers":["Reactome:R-HSA-111883","Reactome:R-HSA-111881"],"synonyms":[{"name":"calcium-dependent cytosolic phospholipase A2 activity","type":"narrow"},{"name":"calcium-dependent secreted phospholipase A2 activity","type":"narrow"}],"termid":"GO:0047498"}


id: GO:0070220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfur oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase, and requires the presence of oxygen.","definition_xrefs":["MetaCyc:SULFUROX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxidation","termid":"GO:0019417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"aerobic sulfur oxidation","synonyms":[{"name":"aerobic sulphur oxidation","type":"exact"}],"termid":"GO:0070220"}


id: FYPO:0005669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to hydroxyurea. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to hydroxyurea (obsolete FYPO:0005669)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to HU","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to hydroxyurea","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to hydroxyurea","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005669"}


id: PBO:0057866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3177","termid":"PBO:0057866"}


id: GO:0031978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a plastid thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid lumen","termid":"GO:0031977"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid lumen","termid":"GO:0031978"}


id: MONDO:0045032
data:
  {"annotated_genes":["SJAG_01941","SJAG_00938","SJAG_03011","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85840,85841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[85673,85672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secretory diarrhea","termid":"MONDO:0000249"},{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital secretory diarrhea","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:579.8","MEDGEN:82757","SCTID:25898005","UMLS:C0267661"],"synonyms":[{"name":"congenital secretory diarrhea","type":"exact"}],"termid":"MONDO:0045032","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null},"xrefs":{"Monarch":{"xref_id":"0045032"}}}


id: PBO:0082580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphotransferase; required for phosphatidylcholine biosynthesis and for inositol-dependent regulation of EPT1 transcription; CPT1 has a paralog, EPT1, that arose from the whole genome duplication","termid":"PBO:0082580"}


id: PBO:0051720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 1","termid":"PBO:0051720"}


id: MONDO:1010617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hypothyroidism in pigs in which the cause of the disease is a mutation in the DUOX2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, DUOX2-related, pig","secondary_identifiers":["OMIA:002210-9823"],"termid":"MONDO:1010617","xrefs":{"Monarch":{"xref_id":"1010617"}}}


id: MONDO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory optic neuropathy characterized by isolated episodes (either single or recurrent) of optic neuritis not associated with other neurological or systemic disease. Patients typically present with subacute unilateral loss of vision progressing over several days to two weeks, periocular pain and pain on eye movement (which may precede the onset of visual symptoms), light flashes on eye movement, abnormal color vision, reduced contrast sensitivity, and relative afferent pupillary defect. The optic disk appears swollen in many patients, and uveitis may be associated and can be present for years before the onset of optic neuritis.","definition_xrefs":["Orphanet:499096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated optic neuritis","secondary_identifiers":["GARD:22039","MEDGEN:43952","UMLS:C0022023"],"synonyms":[{"name":"ION","type":"exact"},{"name":"ion","type":"exact"}],"termid":"MONDO:0044688","xrefs":{"Monarch":{"xref_id":"0044688"}}}


id: PBO:0045575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 28","termid":"PBO:0045575"}


id: GO:1905271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000059","PMID:21106936"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of proton-transporting ATP synthase activity, rotational mechanism (obsolete GO:1905271)","synonyms":[{"name":"regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:1905271"}


id: MONDO:0010671
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86311],"is_not":false,"summary":null,"term":"MONDO:0010671"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"microphthalmia, Lenz type","termid":"MONDO:0018924"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, syndromic 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111799","OMIM:309800","UMLS:C0796016","SCTID:438504004","MEDGEN:162898","SCTID:717222003","MESH:C564457","ICD9:759.89","MESH:C537464","Orphanet:85275","GARD:15304"],"synonyms":[{"name":"ANOP1, formerly","type":"exact"},{"name":"Lenz dysplasia","type":"exact"},{"name":"Lenz microphthalmia syndrome","type":"exact"},{"name":"MAA, formerly","type":"exact"},{"name":"MCOPS1","type":"exact"},{"name":"MCOPS4","type":"exact"},{"name":"MCOPS4, formerly","type":"exact"},{"name":"microphthalmia syndromic 4","type":"exact"},{"name":"microphthalmia with ankyloblepharon and intellectual disability","type":"exact"},{"name":"microphthalmia with ankyloblepharon and mental retardation","type":"exact"},{"name":"microphthalmia, syndromic 1","type":"exact"},{"name":"microphthalmia, syndromic 4, formerly","type":"exact"},{"name":"microphthalmia, syndromic type 1","type":"exact"},{"name":"syndromic microphthalmia type 4","type":"exact"}],"termid":"MONDO:0010671","terms_by_termid":{"MONDO:0010671":null},"xrefs":{"Monarch":{"xref_id":"0010671"}}}


id: PBO:0030272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0030272"}


id: PR:Q09771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atf31 gene.","definition_xrefs":["UniProtKB:Q09771","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor atf31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.02","synonyms":[{"name":"Spom972h-atf31","type":"exact"}],"termid":"PR:Q09771"}


id: GO:0047374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylumbelliferyl acetate + H2O = 4-methylumbelliferone + acetate + H+.","definition_xrefs":["EC:3.1.1.56","RHEA:12208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0019213","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"methylumbelliferyl-acetate deacetylase activity","secondary_identifiers":["KEGG_REACTION:R04141","MetaCyc:3.1.1.56-RXN"],"synonyms":[{"name":"4-methylumbelliferyl-acetate acylhydrolase activity","type":"related"},{"name":"esterase D activity","type":"related"}],"termid":"GO:0047374"}


id: PBO:0045873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 6","termid":"PBO:0045873"}


id: MONDO:0017721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Sandhoff disease","termid":"MONDO:0010006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005559","MONDO:0002561","MONDO:0005328","MONDO:0005244","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"Sandhoff disease, infantile form","secondary_identifiers":["Orphanet:309155","SCTID:238018004","UMLS:C0751490","GARD:7604","MEDGEN:199669"],"synonyms":[{"name":"Hexosaminidases A and B deficiency, infantile form","type":"exact"},{"name":"infantile GM2 gangliosidosis 0 variant","type":"exact"}],"termid":"MONDO:0017721","xrefs":{"Monarch":{"xref_id":"0017721"}}}


id: MONDO:0008016
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86032,86033],"is_not":false,"summary":null,"term":"MONDO:0008016"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"trismus-pseudocamptodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:8757006","GARD:2621","ICD9:759.89","MEDGEN:78540","OMIM:158300","Orphanet:3377","MESH:C535857","UMLS:C0265226","DOID:0111603","NORD:1795"],"synonyms":[{"name":"DA7","type":"related"},{"name":"Dutch-Kentucky syndrome","type":"exact"},{"name":"Hecht syndrome","type":"exact"},{"name":"Hecht-Beals syndrome","type":"exact"},{"name":"arthrogryposis distal type 7","type":"related"},{"name":"arthrogryposis, distal, type 7","type":"related"},{"name":"distal arthrogryposis type 7","type":"exact"},{"name":"mouth, inability to open completely, and short finger-flexor tendons","type":"related"},{"name":"trismus-pseudocamptodactyly syndrome","type":"exact"}],"termid":"MONDO:0008016","terms_by_termid":{"MONDO:0008016":null},"xrefs":{"Monarch":{"xref_id":"0008016"}}}


id: PATO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000155 relative threshold (obsolete PATO:0000155)","termid":"PATO:0000155"}


id: PATO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000293 absolute activity value (obsolete PATO:0000293)","termid":"PATO:0000293"}


id: GO:1903043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chondrocyte hypertrophy.","definition_xrefs":["PMID:23928032","GOC:TermGenie","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of chondrocyte development","termid":"GO:1902761"},{"relation_name":"is_a","term_name":"regulation of chondrocyte hypertrophy","termid":"GO:1903041"},{"relation_name":"positively_regulates","term_name":"chondrocyte hypertrophy","termid":"GO:0003415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte hypertrophy","synonyms":[{"name":"activation of chondrocyte hypertrophy","type":"narrow"},{"name":"up regulation of chondrocyte hypertrophy","type":"exact"},{"name":"up-regulation of chondrocyte hypertrophy","type":"exact"},{"name":"upregulation of chondrocyte hypertrophy","type":"exact"}],"termid":"GO:1903043"}


id: PBO:0090989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk15","termid":"PBO:0090989"}


id: MONDO:0016556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism","termid":"MONDO:0015792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient congenital hypothyroidism due to neonatal factor","secondary_identifiers":["MEDGEN:1842815","GARD:20646","UMLS:C5680930","Orphanet:238699"],"termid":"MONDO:0016556","xrefs":{"Monarch":{"xref_id":"0016556"}}}


id: PBO:0083692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme regulator; involved in synthesis of phosphatidylinositol 3,5-bisphosphate, in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; binds negative (Fig4p) and positive (Fab1p) regulators of PtdIns(3,5)P(2) to control endolysosome function; similar to mammalian Vac14p","termid":"PBO:0083692"}


id: PBO:0068855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 94, pseudogene","termid":"PBO:0068855"}


id: GO:0009941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast envelope","termid":"GO:0009941"}


id: MONDO:0017294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile glycerol kinase deficiency (GKD) is a severe form of GKD characterized clinically by poor feeding, failure to thrive, salt-wasting dehydration, vomiting, Addisonian pigmentation, hypotonia, and disorders of consciousness. Some patients have complex GKD associated with adrenal hypoplasia congenita and/or Duchenne muscular dystrophy (DMD) with manifestations including intellectual deficit, dysmorphic facial features, abnormal external genitalia, strabismus, seizures, and progressive lethargy.","definition_xrefs":["Orphanet:284408"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"isolated glycerol kinase deficiency","termid":"MONDO:0018459"},{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"},{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycerol kinase deficiency, infantile form","termid":"MONDO:0017294","xrefs":{"Monarch":{"xref_id":"0017294"}}}


id: GO:0008421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-long-chain-fatty-acyl-L-glutamate + H2O = a fatty acid anion + L-glutamate.","definition_xrefs":["EC:3.5.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"long-chain fatty-acyl-glutamate deacylase activity","secondary_identifiers":["MetaCyc:3.5.1.55-RXN","RHEA:17517"],"synonyms":[{"name":"N-long-chain-fatty-acyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"long-chain acylglutamate amidase activity","type":"related"},{"name":"long-chain aminoacylase activity","type":"related"},{"name":"long-chain fatty acyl-glutamate deacylase activity","type":"exact"},{"name":"long-chain-fatty-acyl-glutamate deacylase activity","type":"exact"}],"termid":"GO:0008421"}


id: SO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exonic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["PMID:23241926","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splicing_silencer","synonyms":[{"name":"ESS","type":"exact"},{"name":"exonic splicing silencer","type":"exact"}],"termid":"SO:0002058"}


id: MONDO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A relatively common disorder characterized by a fairly specific pattern of tremors which are most prominent in the upper extremities and neck, inducing titubations of the head. The tremor is usually mild, but when severe may be disabling. An autosomal dominant pattern of inheritance may occur in some families (i.e., familial tremor). (Mov Disord 1988;13(1):5-10)","definition_xrefs":["MESH:D020329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential tremor","secondary_identifiers":["MEDGEN:78725","UMLS:C0270736","Orphanet:862","EFO:0003108","SCTID:609558009","DOID:4990","ICD10CM:G25.0","ICD9:333.1","OMIMPS:190300"],"synonyms":[{"name":"benign essential tremor","type":"exact"},{"name":"essential hereditary tremor","type":"narrow"},{"name":"shaky hand syndrome","type":"exact"},{"name":"tremor, hereditary essential","type":"narrow"}],"termid":"MONDO:0003233","xrefs":{"Monarch":{"xref_id":"0003233"}}}


id: PBO:0068629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 9, pseudogene","termid":"PBO:0068629"}


id: PBO:0060465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALF1 intronic transcript 1","termid":"PBO:0060465"}


id: GO:0009225
data:
  {"annotated_genes":["SJAG_02783","SJAG_00978","SJAG_02951","SJAG_00519","SJAG_00890","SJAG_03188","SJAG_02954","SJAG_02178","SJAG_04728","SJAG_02648","SJAG_03818","SJAG_01089","SJAG_01209","SJAG_01443","SJAG_01784","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78361,103404,68587,75827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[80402,109215,72909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006011"},{"annotations":[114020,109901,114027,114028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[67562,76944,58184,72322,71396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01089":null,"SJAG_01209":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02178":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleotide-sugar metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-sugar metabolism","type":"exact"}],"termid":"GO:0009225","terms_by_termid":{"GO:0006011":null,"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: PBO:0028325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028325"}


id: PBO:0113243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear peptidyl-prolyl cis-trans isomerase (PPIase); impacts expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; role in rDNA maintenance; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; contains a nucleoplasmin-like fold and can form pentamers","termid":"PBO:0113243"}


id: PBO:0072674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 1","termid":"PBO:0072674"}


id: MONDO:1012095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia, non-human animal","termid":"MONDO:1011689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia, dog","secondary_identifiers":["OMIA:000430-9615"],"termid":"MONDO:1012095","xrefs":{"Monarch":{"xref_id":"1012095"}}}


id: PBO:0043948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A4","termid":"PBO:0043948"}


id: PBO:0064873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 27","termid":"PBO:0064873"}


id: PBO:0089948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein","termid":"PBO:0089948"}


id: PBO:0043873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 2","termid":"PBO:0043873"}


id: PBO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0035915"}


id: GO:2000142
data:
  {"annotated_genes":["SJAG_00909","SJAG_01952","SJAG_02494","SJAG_03421","SJAG_00766","SJAG_04647","SJAG_00342","SJAG_01771","SJAG_00904","SJAG_03573","SJAG_04705","SJAG_01403","SJAG_02849","SJAG_04820","SJAG_00297","SJAG_05203","SJAG_05341","SJAG_02391","SJAG_00150","SJAG_04099","SJAG_02551","SJAG_03590","SJAG_03622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90049,79926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[91018,106019,106369,115036,115599,94675,109037,94785,96196,106558,87797,99350,103732,99001,102275,106691,95714,103993,90705,109064,119233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA-templated transcription initiation.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA-templated transcription initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, initiation","type":"exact"},{"name":"regulation of DNA-templated transcription, initiation","type":"exact"},{"name":"regulation of initiation of DNA-dependent transcription","type":"exact"},{"name":"regulation of transcription initiation, DNA-dependent","type":"exact"}],"termid":"GO:2000142","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: PBO:0067073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 104, pseudogene","termid":"PBO:0067073"}


id: PBO:0054404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1800","termid":"PBO:0054404"}


id: MOD:01560
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01560"}


id: GO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide biosynthetic process","termid":"GO:0043607"}


id: PBO:0058939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule interacting and trafficking domain containing 1","termid":"PBO:0058939"}


id: GO:0120109
data:
  {"annotated_genes":["SJAG_03092","SJAG_01601","SJAG_01837","SJAG_01263","SJAG_01067","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116967],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[99451,76452,105428,117168,90105],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044820"}]},"cv_name":"biological_process","definition":"The process in which the telomeres are gathered together to a small number of foci per chromosome (usually one per chromosome or fewer), and moved to and tethered at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitotic telomere clustering and tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0120109","terms_by_termid":{"GO:0044820":null,"GO:0120110":null}}


id: PBO:0062750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 2","termid":"PBO:0062750"}


id: GO:1903680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an acinar cell of sebaceous gland.","definition_xrefs":["PMID:17018284","PMID:18334552","PMID:19944183","GOC:TermGenie","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland cell differentiation","termid":"GO:0001949"},{"relation_name":"is_a","term_name":"acinar cell differentiation","termid":"GO:0090425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell of sebaceous gland differentiation","synonyms":[{"name":"sebocyte differentiation","type":"exact"}],"termid":"GO:1903680"}


id: PBO:0087646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences contributing to both complex assembly and DNA binding","termid":"PBO:0087646"}


id: PBO:0081602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 526","termid":"PBO:0081602"}


id: PBO:0059076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 2","termid":"PBO:0059076"}


id: MONDO:0035793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with h-type fistula (obsolete MONDO:0035793)","secondary_identifiers":["Orphanet:601033"],"termid":"MONDO:0035793","xrefs":{"Monarch":{"xref_id":"0035793"}}}


id: PBO:0055100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2518","termid":"PBO:0055100"}


id: MONDO:0005919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Failure of the placenta to deliver an adequate supply of nutrients and oxygen to the fetus.","definition_xrefs":["MESH:D010927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental insufficiency","secondary_identifiers":["MEDGEN:45942","EFO:0007443","UMLS:C0032051","SCTID:237292005","Orphanet:439167","DOID:3891","GARD:21823","ICD9:762.2"],"synonyms":[{"name":"insufficiency, placental","type":"related"},{"name":"uteroplacental vascular insufficiency","type":"exact"}],"termid":"MONDO:0005919","xrefs":{"Monarch":{"xref_id":"0005919"}}}


id: PBO:0061531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase","termid":"PBO:0061531"}


id: PBO:0041865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 10","termid":"PBO:0041865"}


id: FYPO:0000029
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119920,119921,119922],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome segregation is abnormal. Chromosome segregation begins with the alignment of chromosomes at the metaphase plate, includes sister chromatid separation, and ends when chromosomes have completed movement to the spindle poles.","definition_xrefs":["PomBase:mah","GO:0007059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromosome segregation","references_by_uniquename":{"PMID:24184107":null},"secondary_identifiers":["FYPO:0000226"],"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"centromere function defective","type":"related"},{"name":"chromosome missegregation","type":"related"},{"name":"chromosome segregation defects","type":"exact"},{"name":"chromosome segregation: abnormal","type":"related"}],"termid":"FYPO:0000029","terms_by_termid":{"FYPO:0000671":null}}


id: PBO:0068569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 20, pseudogene","termid":"PBO:0068569"}


id: MONDO:0054559
data:
  {"annotated_genes":["SJAG_00578"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87239],"is_not":false,"summary":null,"term":"MONDO:0054559"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIq","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479353","OMIM:617395","DOID:0070269","GARD:17720","Orphanet:435934","MEDGEN:1390458"],"synonyms":[{"name":"CDG Iiq","type":"related"},{"name":"CDG2Q","type":"related"},{"name":"COG2-CDG","type":"exact"},{"name":"COG2-related congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0054559","terms_by_termid":{"MONDO:0054559":null},"xrefs":{"Monarch":{"xref_id":"0054559"}}}


id: PBO:0088323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps8","termid":"PBO:0088323"}


id: GO:0004062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate.","definition_xrefs":["EC:2.8.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aryl sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-158860","Reactome:R-HSA-176585","Reactome:R-HSA-176646","Reactome:R-HSA-158849","RHEA:12164","Reactome:R-HSA-159358","Reactome:R-HSA-158468","Reactome:R-HSA-176474","MetaCyc:ARYL-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"1-naphthol phenol sulfotransferase activity","type":"related"},{"name":"2-naphtholsulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:phenol sulfotransferase activity","type":"related"},{"name":"4-nitrocatechol sulfokinase activity","type":"related"},{"name":"PST","type":"related"},{"name":"aryl sulphotransferase activity","type":"exact"},{"name":"arylsulfotransferase","type":"broad"},{"name":"dopamine sulfotransferase activity","type":"related"},{"name":"p-nitrophenol sulfotransferase activity","type":"related"},{"name":"phenol sulfokinase activity","type":"related"},{"name":"phenol sulfotransferase activity","type":"related"},{"name":"ritodrine sulfotransferase activity","type":"related"},{"name":"sulfokinase activity","type":"related"}],"termid":"GO:0004062"}


id: PBO:0077532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 245","termid":"PBO:0077532"}


id: PBO:0079419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 2","termid":"PBO:0079419"}


id: MONDO:0024535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any singleton-Merten dysplasia in which the cause of the disease is a mutation in the IFIH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Singleton-Merten dysplasia","termid":"MONDO:0008429"},{"relation_name":"is_a","term_name":"IFIH1-related type 1 interferonopathy","termid":"MONDO:0700262"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Singleton-Merten syndrome 1","secondary_identifiers":["MEDGEN:899946","UMLS:C4225427","OMIM:182250"],"synonyms":[{"name":"IFIH1 singleton-Merten dysplasia","type":"exact"},{"name":"SGMRT1","type":"related"},{"name":"singleton-Merten dysplasia caused by mutation in IFIH1","type":"exact"},{"name":"singleton-Merten syndrome 1","type":"related"}],"termid":"MONDO:0024535","xrefs":{"Monarch":{"xref_id":"0024535"}}}


id: PATO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000728 metabolic function value (obsolete PATO:0000728)","termid":"PATO:0000728"}


id: GO:0035895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of blood mast cell degranulation in another organism. Mast cell degranulation is the regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.","definition_xrefs":["PMID:21549739","GOC:bf","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of mast cell degranulation in another organism (obsolete GO:0035895)","synonyms":[{"name":"modulation of mast cell degranulation in other organism","type":"exact"},{"name":"regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0035895"}


id: PBO:0039993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 8A","termid":"PBO:0039993"}


id: GO:0102124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + O2 + H+ + NAD(P)H = 16alpha, 17-epoxy gibberellin A12 + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12 16alpha,17 epoxidase activity (obsolete GO:0102124)","termid":"GO:0102124"}


id: GO:1905082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial translational elongation.","definition_xrefs":["PMID:25738458","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"mitochondrial translational elongation","termid":"GO:0070125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial translational elongation","synonyms":[{"name":"regulation of mitochondrial translation elongation","type":"exact"}],"termid":"GO:1905082"}


id: PBO:0063270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 16","termid":"PBO:0063270"}


id: GO:1901252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of egress of virus within host cell.","definition_xrefs":["GOC:jl","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular transport of viral material","synonyms":[{"name":"regulation of egress of virus within host cell","type":"related"},{"name":"regulation of movement of virus within host cell","type":"exact"},{"name":"regulation of viral egress","type":"exact"}],"termid":"GO:1901252"}


id: GO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mucosal-associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosa-associated lymphoid tissue development","synonyms":[{"name":"BALT development","type":"narrow"},{"name":"GALT development","type":"narrow"},{"name":"NALT development","type":"narrow"},{"name":"bronchial-associated lymphoid tissue development","type":"narrow"},{"name":"gut-associated lymphoid tissue development","type":"narrow"},{"name":"mucosal-associated lymphoid tissue development","type":"exact"},{"name":"nasopharyngeal-associated lymphoid tissue development","type":"narrow"}],"termid":"GO:0048537"}


id: GO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the second transesterification reaction of U12-type spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. The catalytic site is thought to be formed by U6 and/or U2 snRNAs and/or associated proteins.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete second U12-type spliceosomal transesterification activity (obsolete GO:0000367)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"second U12-type spliceosomal transesterification activity","type":"exact"}],"termid":"GO:0000367"}


id: PBO:0045913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 9","termid":"PBO:0045913"}


id: GO:1900486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:2001210"},{"relation_name":"positively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006629","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","synonyms":[{"name":"activation of Ac-MVA pathway","type":"exact"},{"name":"activation of acetate-mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"narrow"},{"name":"activation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"activation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"positive regulation of Ac-MVA pathway","type":"exact"},{"name":"positive regulation of acetate-mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"positive regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"up regulation of Ac-MVA pathway","type":"exact"},{"name":"up regulation of acetate-mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"up regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"up-regulation of Ac-MVA pathway","type":"exact"},{"name":"up-regulation of acetate-mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"up-regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"upregulation of Ac-MVA pathway","type":"exact"},{"name":"upregulation of acetate-mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"upregulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:1900486"}


id: MONDO:0043125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ptosis","termid":"MONDO:0000728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mcpherson robertson cammarano syndrome","secondary_identifiers":["UMLS:C2931751","MEDGEN:419888","MESH:C538161"],"synonyms":[{"name":"dominantly inherited ptosis, strabismus and ectopic pupils","type":"related"}],"termid":"MONDO:0043125","xrefs":{"Monarch":{"xref_id":"0043125"}}}


id: GO:2000209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anoikis","synonyms":[{"name":"regulation of detachment induced cell death","type":"exact"},{"name":"regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000209"}


id: MONDO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell bile duct carcinoma","secondary_identifiers":["NCIT:C5777","UMLS:C0861861","DOID:5537","MEDGEN:209017"],"synonyms":[{"name":"bile duct squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003500","xrefs":{"Monarch":{"xref_id":"0003500"}}}


id: GO:1904901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin II filament organization.","definition_xrefs":["PMID:22761445","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"positive regulation of myosin II filament organization","synonyms":[{"name":"activation of myosin II filament assembly or disassembly","type":"related"},{"name":"activation of myosin II filament organisation","type":"narrow"},{"name":"activation of myosin II filament organization","type":"narrow"},{"name":"activation of myosin II polymerization or depolymerization","type":"related"},{"name":"positive regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"positive regulation of myosin II filament organisation","type":"exact"},{"name":"positive regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up regulation of myosin II filament organisation","type":"exact"},{"name":"up regulation of myosin II filament organization","type":"exact"},{"name":"up regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up-regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up-regulation of myosin II filament organisation","type":"exact"},{"name":"up-regulation of myosin II filament organization","type":"exact"},{"name":"up-regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"upregulation of myosin II filament assembly or disassembly","type":"related"},{"name":"upregulation of myosin II filament organisation","type":"exact"},{"name":"upregulation of myosin II filament organization","type":"exact"},{"name":"upregulation of myosin II polymerization or depolymerization","type":"related"}],"termid":"GO:1904901"}


id: GO:0042354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-fucose, 6-deoxy-L-galactose, a sugar that occurs in fucans, a class of polysaccharides in seaweeds, especially Fucus species, and in the cell wall matrix of higher plants.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-fucose metabolic process","synonyms":[{"name":"L-fucose metabolism","type":"exact"}],"termid":"GO:0042354"}


id: PBO:0053166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver enriched antimicrobial peptide 2","termid":"PBO:0053166"}


id: MOD:00181
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-sulfo-L-tyrosine.","definition_xrefs":["PubMed:2303439","DeltaMass:88","PubMed:3801003","Unimod:40#Y","OMSSA:114","PubMed:10226369","RESID:AA0172","PubMed:3778455","PubMed:14752058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 243.02-243.03 Da","termid":"MOD:00774"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-sulfo-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-(4-sulfooxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(4-hydroxyphenyl)propanoic acid 4'-sulfate","type":"exact"},{"name":"MOD_RES Sulfotyrosine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O4'-sulfo-L-tyrosine","type":"exact"},{"name":"O4-sulfotyrosine","type":"exact"},{"name":"OSulfTyr","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"Sulphation (of O of Tyrosine)","type":"exact"},{"name":"Tyrosinyl Sulphate","type":"exact"},{"name":"sulfationy","type":"exact"},{"name":"tyrosine sulfate","type":"exact"},{"name":"tyrosine-O-sulfonic acid","type":"exact"},{"name":"tyrosine-O-sulphonic acid","type":"exact"}],"termid":"MOD:00181"}


id: MONDO:0100025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by onset of refractory focal seizures in the first year of life, with associated severe encephalopathy. Focal seizures arise independently in both hemispheres and can migrate from one cortical region to another randomly but consecutively in the same seizure. Seizures are often prolonged with episodes of status epilepticus. Prognosis is poor with severe neurological disability and reduced life expectancy, although a milder evolution has been reported in a few children.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile-onset epilepsy syndrome with developmental and epileptic encephalopathy","termid":"MONDO:0800490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy of infancy with migrating focal seizures","secondary_identifiers":["MEDGEN:1381392","icd11.foundation:1727727812","NANDO:1200595","UMLS:C4518639","SCTID:733195008"],"synonyms":[{"name":"EIMFS","type":"exact"}],"termid":"MONDO:0100025","xrefs":{"Monarch":{"xref_id":"0100025"}}}


id: PBO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis, specifically","termid":"PBO:0004909"}


id: MONDO:0044987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the face.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete face disorder (obsolete MONDO:0044987)","secondary_identifiers":["SCTID:118930001"],"synonyms":[{"name":"disease of face","type":"exact"},{"name":"disease or disorder of face","type":"exact"},{"name":"disorder of face","type":"exact"},{"name":"face disease","type":"exact"},{"name":"face disease or disorder","type":"exact"}],"termid":"MONDO:0044987","xrefs":{"Monarch":{"xref_id":"0044987"}}}


id: GO:0034511
data:
  {"annotated_genes":["SJAG_00344","SJAG_00945","SJAG_03846","SJAG_04224","SJAG_03028"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66374,74682,76080,78315,78443],"is_not":false,"summary":null,"term":"GO:0034511"}]},"cv_name":"molecular_function","definition":"Binding to a U3 small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00945":null,"SJAG_03028":null,"SJAG_03846":null,"SJAG_04224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"U3 snoRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0034511","terms_by_termid":{"GO:0034511":null}}


id: GO:0061249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a mesonephric glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular capillary formation","termid":"GO:0072104"},{"relation_name":"part_of","term_name":"mesonephric glomerulus vasculature morphogenesis","termid":"GO:0061248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular capillary formation","termid":"GO:0061249"}


id: GO:0097748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the synthesis of RNA from ribonucleotide triphosphates in the presence of a nucleic acid template, via extension of the 5'-end.","definition_xrefs":["PMID:22456265","GOC:pf","PMID:27484477","PMID:30917604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase activity","termid":"GO:0097747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"3'-5' RNA polymerase activity","secondary_identifiers":["RHEA:57528"],"termid":"GO:0097748"}


id: PR:P78750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.06","synonyms":[{"name":"Spom972h-utp18","type":"exact"},{"name":"U3 snoRNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78750"}


id: PBO:0041124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7","termid":"PBO:0041124"}


id: PBO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_transport","termid":"PBO:0031714"}


id: GO:0033913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->2)-glucosidic linkages in (1->2)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan endo-1,2-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.71-RXN"],"synonyms":[{"name":"1,2-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-D-1,2-glucanase activity","type":"related"},{"name":"endo-(1->2)-beta-D-glucanase activity","type":"related"},{"name":"endo-1,2-beta-glucanase activity","type":"related"}],"termid":"GO:0033913"}


id: PBO:0041877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castor zinc finger 1","termid":"PBO:0041877"}


id: PBO:0076727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia/lymphoma 6","termid":"PBO:0076727"}


id: MONDO:0006544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A self-limited viral infectious disorder caused by the human parvovirus B19. It affects predominantly children and is characterized by the development of a bright red skin eruption in the cheeks. It is followed by a maculopapular skin eruption in the extremities which eventually fades into a lacey pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"viral exanthem","termid":"MONDO:0006619"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythema infectiosum","secondary_identifiers":["MEDGEN:43142","NCIT:C84695","UMLS:C0085273","DOID:8743","EFO:1000693","SCTID:34730008","ICD9:057.0","icd11.foundation:352375140","MESH:D016731"],"synonyms":[{"name":"fifth disease","type":"exact"}],"termid":"MONDO:0006544","xrefs":{"Monarch":{"xref_id":"0006544"}}}


id: GO:2000594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of metanephric DCT cell differentiation","termid":"GO:2000592"},{"relation_name":"positively_regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric DCT cell differentiation","synonyms":[{"name":"positive regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000594"}


id: PBO:0076021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 17a","termid":"PBO:0076021"}


id: GO:0030221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires specialized features of a basophil cell.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil differentiation","synonyms":[{"name":"basophil cell differentiation","type":"exact"}],"termid":"GO:0030221"}


id: GO:0033691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sialic acid, a N- or O- substituted derivative of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria.","definition_xrefs":["GOC:add","ISBN:9780721601465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sialic acid binding","synonyms":[{"name":"N-acetylneuraminic acid binding","type":"narrow"}],"termid":"GO:0033691"}


id: MONDO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An malaria caused by infection with Plasmodium ovale.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium ovale malaria","secondary_identifiers":["SCTID:19341001","DOID:12919","MEDGEN:508870","UMLS:C0152072","ICD10CM:B53.0","ICD9:084.3"],"synonyms":[{"name":"Malariaby Plasmodium ovale","type":"exact"},{"name":"ovale malaria","type":"exact"}],"termid":"MONDO:0001601","xrefs":{"Monarch":{"xref_id":"0001601"}}}


id: FYPO:0007632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 16 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007632"}


id: FYPO:0007392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which that are aneuploid due to the presence of an extra copy of chromosome 3 lose the extra chromosome, producing haploid daughter cells, at a higher frequency than in otherwise wild-type cells.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:22737087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased loss of disomic chromosome 3","synonyms":[{"name":"increased haploidisation in presence of chromosome 3 disomy","type":"related"},{"name":"increased loss of disomic chromosome 3 during mitotic cell cycle","type":"related"},{"name":"increased loss of disomic chromosome 3 during vegetative growth","type":"exact"}],"termid":"FYPO:0007392"}


id: PBO:0063218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 8","termid":"PBO:0063218"}


id: GO:2000114
data:
  {"annotated_genes":["SJAG_00845","SJAG_01373","SJAG_03581","SJAG_00317","SJAG_04522","SJAG_02536","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94918,112274],"is_not":false,"summary":null,"term":"GO:2000114"},{"annotations":[91300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[104017,112781,107927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"},{"annotations":[116884,107928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of cell polarity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03581":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of bud site selection/establishment of cell polarity","type":"related"},{"name":"regulation of cell polarization","type":"exact"}],"termid":"GO:2000114","terms_by_termid":{"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: GO:0051905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pigment granule to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of pigment granule localization","synonyms":[{"name":"establishment of pigment granule localisation","type":"exact"}],"termid":"GO:0051905"}


id: GO:1903227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthosine.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:7007809","PMID:7559336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"xanthosine metabolic process","synonyms":[{"name":"xanthosine metabolism","type":"exact"}],"termid":"GO:1903227"}


id: FYPO:0007692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange activator is increased.","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"increased DNA strand exchange activator activity","synonyms":[{"name":"increased RecA-family recombinase activator activity","type":"exact"},{"name":"increased positive regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007692"}


id: PBO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1P (pseudogene)","termid":"PBO:0051089"}


id: GO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"olfactory learning","termid":"GO:0008355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olfactory learning","termid":"GO:0090328"}


id: FYPO:0004280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of hypoxanthine DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal hypoxanthine DNA N-glycosylase activity","termid":"FYPO:0004279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased hypoxanthine DNA N-glycosylase activity","synonyms":[{"name":"reduced hypoxanthine DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004280"}


id: GO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamyl alcohol + NADP+ = cinnamaldehyde + NADPH + H+. Also acts on coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.","definition_xrefs":["EC:1.1.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cinnamyl-alcohol dehydrogenase activity","secondary_identifiers":["MetaCyc:CINNAMYL-ALCOHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"CAD activity","type":"broad"},{"name":"cinnamyl alcohol dehydrogenase activity","type":"related"},{"name":"cinnamyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0045551"}


id: PBO:0054929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2343","termid":"PBO:0054929"}


id: GO:0018397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-2'-bromophenylalanine.","definition_xrefs":["RESID:AA0174"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-2'-bromophenylalanine (obsolete GO:0018397)","termid":"GO:0018397"}


id: FYPO:0001955
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[119784,119816,119790,119779],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null,"SJAG_04703":null},"genotype_count":5,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"spheroid cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02819","SJAG_03453","SJAG_01794","SJAG_00514","SJAG_04703"],"single_locus_genotype_uniquenames":["scd1delta","efc25delta","ras1delta","for3delta","scd2delta"],"synonyms":[{"name":"cell morphology, round cells","type":"related"},{"name":"cell morphology, rounded cells","type":"related"},{"name":"rounded cell","type":"exact"}],"termid":"FYPO:0001955","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001956":null,"FYPO:0002380":null}}


id: GO:1905075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:BHF","PMID:18718461","GOC:TermGenie","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of tight junction disassembly","termid":"GO:1905073"},{"relation_name":"positively_regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tight junction disassembly","synonyms":[{"name":"activation of occluding cell junction disassembly","type":"narrow"},{"name":"activation of occluding junction disassembly","type":"narrow"},{"name":"activation of tight junction disassembly","type":"narrow"},{"name":"positive regulation of occluding cell junction disassembly","type":"exact"},{"name":"positive regulation of occluding junction disassembly","type":"exact"},{"name":"up regulation of occluding cell junction disassembly","type":"exact"},{"name":"up regulation of tight junction disassembly","type":"exact"},{"name":"up-regulation of occluding cell junction disassembly","type":"exact"},{"name":"up-regulation of tight junction disassembly","type":"exact"},{"name":"upregulation of occluding cell junction disassembly","type":"exact"},{"name":"upregulation of tight junction disassembly","type":"exact"}],"termid":"GO:1905075"}


id: GO:0014722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by changing the calcium ion signals that trigger contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by calcium ion signaling","synonyms":[{"name":"regulation of skeletal muscle contraction by calcium ion signalling","type":"exact"}],"termid":"GO:0014722"}


id: PATO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's consisting of blebbing of the nucleus and DNA fragmentation due to the cell undergoing a specific form of programmed cell death termed apoptosis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic","secondary_identifiers":["GO:0006915"],"termid":"PATO:0000638"}


id: PBO:0041508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 93","termid":"PBO:0041508"}


id: GO:0018126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a hydroxy group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein hydroxylation","secondary_identifiers":["Reactome:R-HSA-9629569"],"synonyms":[{"name":"protein amino acid hydroxylation","type":"exact"}],"termid":"GO:0018126"}


id: GO:1905754
data:
  {"annotated_genes":["SJAG_03638","SJAG_01867"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92194,113337],"is_not":false,"summary":null,"term":"GO:1905754"}]},"cv_name":"cellular_component","definition":"Any nucleus that is part of a ascospore-type prospore.","definition_xrefs":["GOC:TermGenie","PMID:26942678","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01867":null,"SJAG_03638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ascospore-type prospore nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus of ascospore-type prospore","type":"exact"},{"name":"nucleus of ascospore-type prospore","type":"exact"}],"termid":"GO:1905754","terms_by_termid":{"GO:1905754":null}}


id: GO:0047854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-diguanidinobutane + H2O = agmatine + urea.","definition_xrefs":["RHEA:13597","EC:3.5.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"diguanidinobutanase activity","secondary_identifiers":["MetaCyc:DIGUANIDINOBUTANASE-RXN","KEGG_REACTION:R01418"],"synonyms":[{"name":"1,4-diguanidinobutane amidinohydrolase activity","type":"related"}],"termid":"GO:0047854"}


id: PBO:0090406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex/COPII-coated vesicle component/nuclear pore outer ring WD repeat protein Sec13","termid":"PBO:0090406"}


id: PBO:0059082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOK protein kinase","termid":"PBO:0059082"}


id: GO:1901400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta3 activation (obsolete GO:1901400)","synonyms":[{"name":"activation of TGF-beta 3 activation","type":"exact"},{"name":"activation of TGFB3 activation","type":"exact"},{"name":"activation of TGFbeta 3 activation","type":"exact"},{"name":"activation of transforming growth factor beta3 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 3 activation","type":"exact"},{"name":"positive regulation of TGFB3 activation","type":"exact"},{"name":"positive regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of TGF-beta 3 activation","type":"exact"},{"name":"up regulation of TGFB3 activation","type":"exact"},{"name":"up regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"up-regulation of TGF-beta 3 activation","type":"exact"},{"name":"up-regulation of TGFB3 activation","type":"exact"},{"name":"up-regulation of TGFbeta 3 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"upregulation of TGF-beta 3 activation","type":"exact"},{"name":"upregulation of TGFB3 activation","type":"exact"},{"name":"upregulation of TGFbeta 3 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta3 activation","type":"exact"}],"termid":"GO:1901400"}


id: PBO:0069057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 303, pseudogene","termid":"PBO:0069057"}


id: PBO:0117119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC35F4 antisense RNA 1","termid":"PBO:0117119"}


id: SO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where there is no resulting change to the encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","SO:0001588","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://en.wikipedia.org/wiki/Silent_mutation","http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","http://en.wikipedia.org/wiki/Synonymous_mutation"],"synonyms":[{"name":"ANNOVAR:synonymous SNV","type":"related"},{"name":"Jannovar:synonymous_variant","type":"exact"},{"name":"Seattleseq:synonymous","type":"exact"},{"name":"Seattleseq:synonymous-near-splice","type":"related"},{"name":"VAAST:synonymous_codon","type":"exact"},{"name":"VAAST:synonymous_variant","type":"exact"},{"name":"VAT:synonymous","type":"exact"},{"name":"VEP:synonymous_variant","type":"exact"},{"name":"coding-synon","type":"exact"},{"name":"silent mutation","type":"related"},{"name":"silent substitution","type":"related"},{"name":"silent_mutation","type":"related"},{"name":"snpEff:SYNONYMOUS_CODING","type":"exact"},{"name":"synonymous codon","type":"exact"},{"name":"synonymous_coding","type":"exact"},{"name":"synonymous_codon","type":"exact"}],"termid":"SO:0001819"}


id: MONDO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maxillary sinus adenoid cystic carcinoma (obsolete MONDO:0004138)","termid":"MONDO:0004138","xrefs":{"Monarch":{"xref_id":"0004138"}}}


id: PBO:0038915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5","termid":"PBO:0038915"}


id: PBO:0055753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA neighboring enhancer of FOXA2","termid":"PBO:0055753"}


id: PBO:0068438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 8, pseudogene","termid":"PBO:0068438"}


id: MONDO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Simpson-Golabi-Behmel syndrome (obsolete MONDO:0000725)","termid":"MONDO:0000725","xrefs":{"Monarch":{"xref_id":"0000725"}}}


id: PBO:0078469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-7","termid":"PBO:0078469"}


id: GO:0018858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + benzoate + CoA = AMP + benzoyl-CoA + diphosphate.","definition_xrefs":["RHEA:10132","EC:6.2.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"benzoate-CoA ligase activity","secondary_identifiers":["MetaCyc:BENZOATE--COA-LIGASE-RXN","KEGG_REACTION:R01422","UM-BBD_reactionID:r0189"],"synonyms":[{"name":"benzoate-coenzyme A ligase activity","type":"related"},{"name":"benzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"benzoyl CoA synthetase (AMP forming)","type":"related"},{"name":"benzoyl-coenzyme A synthetase activity","type":"related"}],"termid":"GO:0018858"}


id: GO:0060114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vestibular hair cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell differentiation","synonyms":[{"name":"vestibular hair cell differentiation","type":"exact"}],"termid":"GO:0060114"}


id: MONDO:0022820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital articular rigidity","secondary_identifiers":["MEDGEN:108568","UMLS:C0595987"],"termid":"MONDO:0022820","xrefs":{"Monarch":{"xref_id":"0022820"}}}


id: PBO:0082441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; also involved in response to DNA damage; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB2 has a paralog, CLB1, that arose from the whole genome duplication","termid":"PBO:0082441"}


id: FYPO:0005848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K9 specific histone methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000641","FYPO:0000707"],"is_obsolete":false,"name":"abolished histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"abolished H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"histone methyltransferase activity (H3-K9 specific) activity abolished","type":"exact"}],"termid":"FYPO:0005848"}


id: MONDO:0014573
data:
  {"annotated_genes":["SJAG_02349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85798],"is_not":false,"summary":null,"term":"MONDO:0014573"}]},"cv_name":"mondo","definition":"Any Cole-Carpenter syndrome in which the cause of the disease is a mutation in the SEC24D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cole-Carpenter syndrome","termid":"MONDO:0016085"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cole-Carpenter syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225382","MEDGEN:905199","OMIM:616294","GARD:16077"],"synonyms":[{"name":"CLCRP2","type":"related"},{"name":"COLE-CARPENTER syndrome 2","type":"related"},{"name":"Cole-Carpenter syndrome 2","type":"exact"},{"name":"Cole-Carpenter syndrome caused by mutation in SEC24D","type":"exact"},{"name":"Cole-Carpenter syndrome type 2","type":"exact"},{"name":"SEC24D Cole-Carpenter syndrome","type":"exact"}],"termid":"MONDO:0014573","terms_by_termid":{"MONDO:0014573":null},"xrefs":{"Monarch":{"xref_id":"0014573"}}}


id: MONDO:0016514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex with anodontia/hypodontia","secondary_identifiers":["GARD:18766","UMLS:C0432313","Orphanet:2325","MEDGEN:609450"],"synonyms":[{"name":"Gamborg-Nielsen syndrome","type":"exact"},{"name":"Kallin syndrome","type":"exact"}],"termid":"MONDO:0016514","xrefs":{"Monarch":{"xref_id":"0016514"}}}


id: PBO:0084558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitochondrial ribosome receptor; forms a complex with Mba1p to facilitate recruitment of mRNA-specific translational activators to ribosomes; ribosome-associated protein involved in the insertion of newly synthesized proteins into the mitochondrial inner membrane; role in protein export and K+/H+ exchange; localizes to the inner mitochondrial membrane; human ortholog Letm1 implicated in Wolf-Hirschhorn syndrome","termid":"PBO:0084558"}


id: MONDO:0017599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Splenic diffuse red pulp small B-cell lymphoma is a rare, indolent B-cell non-Hodgkin lymphoma characterized by abnormal proliferation of small, monomorphous, basophilic B-lymphocytes, with villous cytoplasm, in the splenic red pulp, bone marrow and peripheral blood. It typically presents in the late clinical stages with splenomegaly and moderate lymphocytosis. Cytopenias are rare and likely associated with hypersplenism.","definition_xrefs":["Orphanet:300869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"marginal zone lymphoma","termid":"MONDO:0017604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic diffuse red pulp small B-cell lymphoma","secondary_identifiers":["NCIT:C80309","SCTID:763884007","UMLS:C2699508","icd11.foundation:1970934986","MEDGEN:397437","GARD:21248","ICDO:9591/3","ONCOTREE:SDRPL"],"synonyms":[{"name":"SDRPL","type":"exact"},{"name":"splenic diffuse red pulp lymphoma","type":"exact"}],"termid":"MONDO:0017599","xrefs":{"Monarch":{"xref_id":"0017599"}}}


id: PBO:0084034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored aspartyl protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; shares functions with Yap3p and Kex2p; MKC7 has a paralog, YPS1, that arose from the whole genome duplication","termid":"PBO:0084034"}


id: PBO:0079163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 32","termid":"PBO:0079163"}


id: PBO:0040251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 7","termid":"PBO:0040251"}


id: MONDO:0014980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy and hearing loss","secondary_identifiers":["OMIMPS:617236"],"synonyms":[{"name":"CRDHL","type":"exact"},{"name":"cone-rod dystrophy and hearing loss","type":"exact"},{"name":"cone-rod dystrophy and hearing loss; CRDHL","type":"exact"}],"termid":"MONDO:0014980","xrefs":{"Monarch":{"xref_id":"0014980"}}}


id: PBO:0069902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1193, pseudogene","termid":"PBO:0069902"}


id: GO:1905834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pyrimidine ribonucleotide stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22065602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pyrimidine ribonucleotide","termid":"GO:1905834"}


id: PBO:0041100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSCL2 lipid droplet biogenesis associated, seipin","termid":"PBO:0041100"}


id: PBO:0049238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM7 antisense RNA 2","termid":"PBO:0049238"}


id: MONDO:0022512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atrial septal defect coronary sinus (obsolete MONDO:0022512)","termid":"MONDO:0022512","xrefs":{"Monarch":{"xref_id":"0022512"}}}


id: PBO:0067349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 446, pseudogene","termid":"PBO:0067349"}


id: GO:1901700
data:
  {"annotated_genes":["SJAG_04026","SJAG_01162","SJAG_01734","SJAG_04312","SJAG_05181","SJAG_01199","SJAG_00574","SJAG_04632","SJAG_02515","SJAG_05256","SJAG_03032","SJAG_00141","SJAG_03303","SJAG_00668","SJAG_01858","SJAG_04823","SJAG_04788","SJAG_03081","SJAG_00472","SJAG_02010","SJAG_04403","SJAG_01254","SJAG_01699","SJAG_03653","SJAG_01216","SJAG_01754","SJAG_01457","SJAG_02960","SJAG_02444","SJAG_04953","SJAG_06611","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102167,116861,94564,109830,107164,115833,106814,106228,109325],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[113040],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[105368,109148,100324,118591,95529,117668],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[105371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[77918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[105547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[78505,95866],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[61028,58085,65297,69224,93478,74670,99599,89744,89322],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[93890,96040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_01858":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03032":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901700","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0097466":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0073099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 3","termid":"PBO:0073099"}


id: GO:0010705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs resulting in double strand break formation and repair through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break processing","termid":"GO:0000706"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049","GO:0006310","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing involved in reciprocal meiotic recombination","termid":"GO:0010705"}


id: PBO:0116243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"custos ortholog, conserved eukaryotic protein, implicated in cell growth or cell division","termid":"PBO:0116243"}


id: MONDO:0009867
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86591],"is_not":false,"summary":null,"term":"MONDO:0009867"}]},"cv_name":"mondo","definition":"Any glycogen storage disease in which the cause of the disease is a mutation in the PRKAG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"PRKAG2-related cardiomyopathy","termid":"MONDO:0800484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0037792"],"is_obsolete":false,"name":"lethal congenital glycogen storage disease of heart","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10728","OMIM:261740","ICD10EXP:G73.6*","MESH:C564888","UMLS:C1849813","MEDGEN:337919","DOID:0090101","ICD10EXP:E74.0+","Orphanet:439854"],"synonyms":[{"name":"PRKAG2 glycogen storage disease","type":"exact"},{"name":"fatal congenital hypertrophic cardiomyopathy due to GSD","type":"exact"},{"name":"fatal congenital hypertrophic cardiomyopathy due to glycogen storage disease","type":"related"},{"name":"fatal congenital hypertrophic cardiomyopathy due to glycogenosis","type":"exact"},{"name":"fatal congenital nonlysosomal cardiac glycogenosis","type":"exact"},{"name":"glycogen storage disease caused by mutation in PRKAG2","type":"exact"},{"name":"glycogen storage disease of heart","type":"related"},{"name":"glycogen storage disease of heart, lethal congenital","type":"related"},{"name":"phosphorylase kinase deficiency of heart","type":"exact"}],"termid":"MONDO:0009867","terms_by_termid":{"MONDO:0009867":null},"xrefs":{"Monarch":{"xref_id":"0009867"}}}


id: PBO:0056166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1 pseudogene 1","termid":"PBO:0056166"}


id: MONDO:0017352
data:
  {"annotated_genes":["SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012393"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00359":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of glutamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21156","SCTID:190724004","ICD9:270.7","Orphanet:289841","MEDGEN:575171","UMLS:C0342669"],"termid":"MONDO:0017352","terms_by_termid":{"MONDO:0012393":null},"xrefs":{"Monarch":{"xref_id":"0017352"}}}


id: GO:0034631
data:
  {"annotated_genes":["SJAG_01613","SJAG_03062","SJAG_03835","SJAG_01546","SJAG_03116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[97101,103366,99550,74376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["PMID:17486116","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"},{"relation_name":"part_of","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at spindle pole body","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to SPB","type":"exact"},{"name":"attachment of spindle microtubules to spindle pole body","type":"exact"},{"name":"microtubule anchoring at SPB","type":"exact"}],"termid":"GO:0034631","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0065276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 1","termid":"PBO:0065276"}


id: MONDO:0008040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myeloid proliferation occurring in newborns with Down syndrome. It is clinically and morphologically indistinguishable from acute myeloid leukemia and is associated with GATA1 mutations. The blasts display morphologic and immunophenotypic features of megakaryocytic lineage. In the majority of patients the myeloid proliferation undergoes spontaneous remission.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"transient myeloproliferative syndrome","secondary_identifiers":["SCTID:721307000","HP:0005534","GARD:12765","MEDGEN:331782","NCIT:C82339","DOID:0060888","OMIM:159595","UMLS:C1834582","MESH:C563551","ONCOTREE:TAM","Orphanet:420611","ICDO:9898/1"],"synonyms":[{"name":"MST","type":"exact"},{"name":"Mst","type":"related"},{"name":"TAM","type":"exact"},{"name":"TMD","type":"exact"},{"name":"Transient abnormal myelopoiesis associated with Down syndrome","type":"exact"},{"name":"leukemia, transient","type":"related"},{"name":"leukemia, transient, of Down syndrome","type":"exact"},{"name":"myeloproliferative syndrome, transient","type":"related"},{"name":"transient abnormal myelopoiesis","type":"exact"},{"name":"transient leukaemia","type":"exact"},{"name":"transient leukemia","type":"exact"},{"name":"transient leurkemia of Down syndrome","type":"exact"},{"name":"transient myeloproliferative disease","type":"exact"},{"name":"transient myeloproliferative disorder","type":"exact"},{"name":"transient myeloproliferative syndrome","type":"exact"},{"name":"transient myeloproliferative syndrome (disease)","type":"exact"}],"termid":"MONDO:0008040","xrefs":{"Monarch":{"xref_id":"0008040"}}}


id: PBO:0085307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase that is highly specific for ADP-ribose 1''-phosphate; a tRNA splicing metabolite; may have a role in regulation of tRNA splicing","termid":"PBO:0085307"}


id: GO:0044248
data:
  {"annotated_genes":["SJAG_03743","SJAG_04570","SJAG_00706","SJAG_02763","SJAG_00570","SJAG_00714","SJAG_02496","SJAG_04858","SJAG_04827","SJAG_02734","SJAG_00495","SJAG_00181","SJAG_03312","SJAG_00281","SJAG_02247","SJAG_04145","SJAG_03316","SJAG_03293","SJAG_03804","SJAG_02235","SJAG_03861","SJAG_03398","SJAG_00674","SJAG_03964","SJAG_00937","SJAG_00944","SJAG_00903","SJAG_03641","SJAG_01430","SJAG_00132","SJAG_01432","SJAG_01612","SJAG_02450","SJAG_01088","SJAG_01903","SJAG_04842","SJAG_03434","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[78650,113512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[77021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009074"},{"annotations":[71898,74233,71535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[112120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[71277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[78403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[80740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[79300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[73613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[71631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[87784,88762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[92045,80017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[102579,78924,74021,76986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"},{"annotations":[78320,96739,74550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[101350,105412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[68908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[114067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[114753,78010,73040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043171"},{"annotations":[70854,96122,116154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006798"},{"annotations":[78376,70618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[72345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[73443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic 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process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular breakdown","type":"exact"},{"name":"cellular catabolism","type":"exact"},{"name":"cellular degradation","type":"exact"}],"termid":"GO:0044248","terms_by_termid":{"GO:0000949":null,"GO:0001561":null,"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0006751":null,"GO:0006798":null,"GO:0009062":null,"GO:0009074":null,"GO:0009436":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0015938":null,"GO:0019266":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0019547":null,"GO:0036088":null,"GO:0042758":null,"GO:0042853":null,"GO:0043171":null,"GO:1903457":null}}


id: PBO:0081284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 69","termid":"PBO:0081284"}


id: PBO:0038847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 16","termid":"PBO:0038847"}


id: PATO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being split asymmetrically on one side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split laterally","termid":"PATO:0002170"}


id: FYPO:0001749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to tacrolimus","termid":"FYPO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tacrolimus during salt stress","synonyms":[{"name":"hypersensitive to tacrolimus during salt stress","type":"exact"},{"name":"sensitive to FK506 during salt stress","type":"exact"},{"name":"sensitive to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001749"}


id: PBO:0076477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 2, ATP binding cassette subfamily B member","termid":"PBO:0076477"}


id: PBO:0072565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome binding protein 1","termid":"PBO:0072565"}


id: FYPO:0008129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of two methyl groups to the N2 position of a guanine residue in a tRNA molecule is increased. Normally, two methyl groups are transferred to the G26 residue.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased tRNA guanosine N2,N2-dimethylation","termid":"FYPO:0008129"}


id: PBO:0044659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 2","termid":"PBO:0044659"}


id: MONDO:0002699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic ductal carcinoma (obsolete MONDO:0002699)","termid":"MONDO:0002699","xrefs":{"Monarch":{"xref_id":"0002699"}}}


id: GO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnesium ion","termid":"GO:0032026"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnesium ion","termid":"GO:0071286"}


id: GO:0001408
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"}]},"cv_name":"biological_process","definition":"The directed movement of guanine nucleotides, GTP, GDP, and/or GMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"guanine nucleotide transport","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0001408","terms_by_termid":{"GO:1903790":null}}


id: PBO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6","termid":"PBO:0000187"}


id: MOD:00334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between the tele nitrogen of a histidine residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:12033922","RESID:AA0329","PubMed:12121092","Unimod:390#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-heme-L-histidine","synonyms":[{"name":"(S)-[7-ethenyl-12-[1-((2-amino-2-carboxyethyl)-1H-imidazol-1-yl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"1'-heme-L-histidine","type":"exact"},{"name":"2-[1-(N1'-histidyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent; via tele nitrogen)","type":"exact"},{"name":"Heme","type":"related"},{"name":"N(epsilon)-histidyl heme","type":"exact"},{"name":"N(tau)-histidyl heme","type":"exact"},{"name":"N1'-histidyl heme","type":"exact"},{"name":"heme","type":"related"},{"name":"tele-histidyl heme","type":"exact"}],"termid":"MOD:00334"}


id: MONDO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone giant cell sarcoma (obsolete MONDO:0003114)","termid":"MONDO:0003114","xrefs":{"Monarch":{"xref_id":"0003114"}}}


id: MONDO:0011593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"},{"relation_name":"is_a","term_name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 2","secondary_identifiers":["MESH:C565296","GARD:16504","OMIM:605751","UMLS:C1853995","MEDGEN:381313","DOID:0081115"],"synonyms":[{"name":"BFIS2","type":"related"},{"name":"convulsions, benign familial infantile, 2","type":"related"},{"name":"seizures, benign familial infantile, 2","type":"exact"},{"name":"seizures, benign familial infantile, type 2","type":"exact"}],"termid":"MONDO:0011593","xrefs":{"Monarch":{"xref_id":"0011593"}}}


id: PBO:0058982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed lineage kinase domain like pseudokinase","termid":"PBO:0058982"}


id: GO:1990688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi vesicle to the lipid bilayer membrane of the ERGIC. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","termid":"GO:1990668"},{"relation_name":"part_of","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","synonyms":[{"name":"Golgi vesicle fusion with ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"Golgi vesicle fusion with ERGIC membrane","type":"exact"}],"termid":"GO:1990688"}


id: PR:P87229
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4G3.03 gene.","definition_xrefs":["UniProtKB:P87229","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.03","synonyms":[{"name":"Spom972h-SPCC4G3.03","type":"exact"}],"termid":"PR:P87229"}


id: PBO:0074544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SND1 intronic transcript 1","termid":"PBO:0074544"}


id: PBO:0054047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1388","termid":"PBO:0054047"}


id: PBO:0003647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphate aminotransferase imidazole acetol phosphate transaminase His3","termid":"PBO:0003647"}


id: _global:capable_of_positively_regulating
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"_global:capable_of_regulating"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_positively_regulating","secondary_identifiers":["RO:0002598"],"termid":"_global:capable_of_positively_regulating"}


id: MONDO:0010423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias 2, X-linked","secondary_identifiers":["MESH:C567462","OMIM:300758","MEDGEN:437064","GARD:18186","UMLS:C2677879"],"synonyms":[{"name":"HYSP2","type":"related"},{"name":"hypospadias 2, X-linked","type":"exact"},{"name":"hypospadias 2, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010423","xrefs":{"Monarch":{"xref_id":"0010423"}}}


id: GO:0018312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-serine to form peptidyl-O-(ADP-ribosyl)-L-serine.","definition_xrefs":["RESID:AA0237"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine ADP-ribosylation (obsolete GO:0018312)","termid":"GO:0018312"}


id: MONDO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic fungal infection caused by Paracoccidioides brasiliensis that is most often seen in immunocompromised patients. It affects the mucous membranes, lymph nodes, lungs and bones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracoccidioidomycosis","secondary_identifiers":["icd11.foundation:268777657","ICD9:116.1","MedDRA:10061906","SCTID:36866003","MESH:D010229","MEDGEN:14601","NORD:1553","EFO:0007417","UMLS:C0030409","DOID:12662","GARD:7323","ICD10CM:B41","NCIT:C34891","Orphanet:73260"],"synonyms":[{"name":"Lutz-Splendore-Almeida disease","type":"related"},{"name":"PCM","type":"related"},{"name":"Paracoccidioidal granuloma","type":"related"},{"name":"South American blastomycosis","type":"related"},{"name":"lobo disease","type":"related"},{"name":"mucocutaneous-lymphangitic paracoccidioidomycosis","type":"exact"},{"name":"paracoccidioidal mycosis","type":"exact"}],"termid":"MONDO:0005894","xrefs":{"Monarch":{"xref_id":"0005894"}}}


id: FYPO:0001848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ferric-chelate reductase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished ferric-chelate reductase activity","synonyms":[{"name":"ferric-chelate reductase activity abolished","type":"exact"}],"termid":"FYPO:0001848"}


id: GO:0102405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-taxifolin(1-) + O2 + NADPH(4-) + H+ = (+)-dihydromyricetin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-taxifolin 5'-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13718","RHEA:61116"],"termid":"GO:0102405"}


id: GO:0034095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of sister chromatid cohesion","termid":"GO:0034092"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"}


id: GO:0120029
data:
  {"annotated_genes":["SJAG_04258","SJAG_01129","SJAG_01669","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58164,61061,66921,67232],"is_not":false,"summary":null,"term":"GO:0120029"}]},"cv_name":"biological_process","definition":"The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mah","PMID:9762918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01129":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_04258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"proton export across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"hydrogen ion export across plasma membrane","type":"exact"},{"name":"hydrogen ion export from cell","type":"broad"},{"name":"proton export from cell","type":"broad"}],"termid":"GO:0120029","terms_by_termid":{"GO:0120029":null}}


id: PBO:0032702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation","termid":"PBO:0032702"}


id: GO:0046192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic phenol-containing compound metabolic process","termid":"GO:0042215"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic phenol-containing compound biosynthetic process","synonyms":[{"name":"anaerobic phenol-containing compound anabolism","type":"exact"},{"name":"anaerobic phenol-containing compound biosynthesis","type":"exact"},{"name":"anaerobic phenol-containing compound formation","type":"exact"},{"name":"anaerobic phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046192"}


id: GO:0035043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of a nuclear envelope containing nuclear pores and a lamina around the male pronucleus, the final step in sperm pronuclear formation.","definition_xrefs":["GOC:bf","PMID:11735001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronuclear envelope synthesis","termid":"GO:0018985"},{"relation_name":"part_of","term_name":"male pronucleus assembly","termid":"GO:0035039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"male pronuclear envelope synthesis","termid":"GO:0035043"}


id: PBO:0084479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maturase-like coding sequence downstream of COX3/Q0275; present in some S. cerevisiae strains and other Saccharomyces species; compound ORF with homology to other group I open reading frames; in S288C is interrupted by two GC clusters, both of which ultimately result in a -1 frameshlft","termid":"PBO:0084479"}


id: PBO:0060893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 2","termid":"PBO:0060893"}


id: PBO:0065472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 3","termid":"PBO:0065472"}


id: PBO:0058669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6797","termid":"PBO:0058669"}


id: PATO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of rate","synonyms":[{"name":"low variability of rate","type":"exact"}],"termid":"PATO:0001588"}


id: PBO:0075401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17","termid":"PBO:0075401"}


id: MONDO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete triple-receptor negative breast cancer (obsolete MONDO:0000619)","termid":"MONDO:0000619","xrefs":{"Monarch":{"xref_id":"0000619"}}}


id: PR:O60142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.11c","synonyms":[{"name":"Spom972h-ppr2","type":"exact"}],"termid":"PR:O60142"}


id: SO:1000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000122 sequence_variant_causing_polypeptide_post_translational_processing_change (obsolete SO:1000122)","synonyms":[{"name":"mutation causing polypeptide post translational processing change","type":"related"},{"name":"polypeptide post-translational processing affected","type":"exact"},{"name":"sequence variant causing polypeptide post translational processing change","type":"exact"}],"termid":"SO:1000122"}


id: GO:0060754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"positively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell chemotaxis","termid":"GO:0060754"}


id: PBO:0068641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 22, pseudogene","termid":"PBO:0068641"}


id: MONDO:0011170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2G (LGMD2G) is a mild subtype of autosomal recessive limb-girdle muscular dystrophy characterized by a variable onset (ranging from infancy to adolescence) of progressive proximal upper and lower limb muscle weakness and atrophy. Mild scapular winging, calf hypertrophy, and lack of respiratory and cardiac involvement are also observed.","definition_xrefs":["Orphanet:34514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of telethonin","termid":"MONDO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2G","secondary_identifiers":["OMIM:601954","UMLS:C1866008","DOID:0110281","SCTID:720522001","GARD:10471","MEDGEN:400895","MESH:C566599"],"synonyms":[{"name":"LGMD2G","type":"exact"},{"name":"TCAP autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"Tcap autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TCAP","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in Tcap","type":"exact"},{"name":"limb-girdle muscular dystrophy due to telethonin deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy, type 2G","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 7","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2G","type":"exact"}],"termid":"MONDO:0011170","xrefs":{"Monarch":{"xref_id":"0011170"}}}


id: MONDO:0010290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multinodular goiter","termid":"MONDO:0000334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goiter, multinodular 2","secondary_identifiers":["MEDGEN:337370","OMIM:300273","UMLS:C1846033","MESH:C564546"],"synonyms":[{"name":"MNG2","type":"exact"},{"name":"goiter, multinodular 2","type":"exact"},{"name":"goiter, multinodular, 2, X-linked dominant","type":"exact"}],"termid":"MONDO:0010290","xrefs":{"Monarch":{"xref_id":"0010290"}}}


id: PBO:0069174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 428, pseudogene","termid":"PBO:0069174"}


id: PBO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.-","termid":"PBO:0001572"}


id: PBO:0070364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 2","termid":"PBO:0070364"}


id: MONDO:0021247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal pelvis neoplasm (obsolete MONDO:0021247)","termid":"MONDO:0021247","xrefs":{"Monarch":{"xref_id":"0021247"}}}


id: MONDO:0010938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) T-B+ due to JAK3 deficiency is a form of SCID characterized by severe and recurrent infections, associated with diarrhea and failure to thrive.","definition_xrefs":["Orphanet:35078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to JAK3 deficiency","secondary_identifiers":["MESH:C563440","GARD:16632","SCTID:718107000","UMLS:C1833275","MEDGEN:331474","OMIM:600802"],"synonyms":[{"name":"SCID, T cell-negative, B cell-positive, NK cell-negative","type":"related"},{"name":"SCID, autosomal recessive, T-negative/B-positive type","type":"exact"},{"name":"T-B+ SCID due to JAK3 deficiency","type":"exact"},{"name":"T-B+ severe combined immunodeficiency due to JAK3 deficiency","type":"exact"},{"name":"T-cell negative B-cell positive severe combined immunodeficiency due to JAK3 deficiency","type":"exact"},{"name":"severe combined immunodeficiency T-cell negative B-cell positive due to janus kinase-3 deficiency","type":"related"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-NEGATIVE, B cell-POSITIVE, NK cell-NEGATIVE","type":"related"}],"termid":"MONDO:0010938","xrefs":{"Monarch":{"xref_id":"0010938"}}}


id: MONDO:0002851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation affecting the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum rhabdomyosarcoma","secondary_identifiers":["UMLS:C1334677","MEDGEN:233686","DOID:4049","NCIT:C6617"],"synonyms":[{"name":"mediastinal rhabdomyosarcoma","type":"exact"},{"name":"mediastinum rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of mediastinum","type":"exact"},{"name":"rhabdomyosarcoma of mediastinum","type":"exact"},{"name":"rhabdomyosarcoma of the mediastinum","type":"exact"}],"termid":"MONDO:0002851","xrefs":{"Monarch":{"xref_id":"0002851"}}}


id: GO:1904024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:20935145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glucose catabolic process to lactate via pyruvate","termid":"GO:1904023"},{"relation_name":"negatively_regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"down regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down regulation of homofermentation","type":"exact"},{"name":"down regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down regulation of homofermentative pathway","type":"exact"},{"name":"down regulation of homolactate fermentation","type":"exact"},{"name":"down regulation of homolactic fermentation","type":"exact"},{"name":"down-regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down-regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down-regulation of homofermentation","type":"exact"},{"name":"down-regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down-regulation of homofermentative pathway","type":"exact"},{"name":"down-regulation of homolactate fermentation","type":"exact"},{"name":"down-regulation of homolactic fermentation","type":"exact"},{"name":"downregulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"downregulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"downregulation of homofermentation","type":"exact"},{"name":"downregulation of homofermentative lactate fermentation","type":"exact"},{"name":"downregulation of homofermentative pathway","type":"exact"},{"name":"downregulation of homolactate fermentation","type":"exact"},{"name":"downregulation of homolactic fermentation","type":"exact"},{"name":"inhibition of glucose catabolic process to lactate via pyruvate","type":"narrow"},{"name":"inhibition of glucose fermentation to lactate via pyruvate","type":"narrow"},{"name":"inhibition of homofermentation","type":"narrow"},{"name":"inhibition of homofermentative lactate fermentation","type":"narrow"},{"name":"inhibition of homofermentative pathway","type":"narrow"},{"name":"inhibition of homolactate fermentation","type":"narrow"},{"name":"inhibition of homolactic fermentation","type":"narrow"},{"name":"negative regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"negative regulation of homofermentation","type":"exact"},{"name":"negative regulation of homofermentative lactate fermentation","type":"exact"},{"name":"negative regulation of homofermentative pathway","type":"exact"},{"name":"negative regulation of homolactate fermentation","type":"exact"},{"name":"negative regulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904024"}


id: PATO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000802 sensory function value (obsolete PATO:0000802)","termid":"PATO:0000802"}


id: PBO:0028696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_telomere","termid":"PBO:0028696"}


id: PBO:0051618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2","termid":"PBO:0051618"}


id: PBO:0057750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1909","termid":"PBO:0057750"}


id: PBO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog2 (predicted)","termid":"PBO:0003362"}


id: GO:0032997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a subunit or subunits capable of binding the Fc portion of an immunoglobulin with additional signaling components. The complex functions as a receptor for immunoglobulin.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Fc receptor complex","synonyms":[{"name":"Fc-receptor complex","type":"exact"},{"name":"FcR complex","type":"exact"},{"name":"immunoglobulin receptor complex","type":"broad"}],"termid":"GO:0032997"}


id: GO:0031692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-1B adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-1B adrenergic receptor binding","synonyms":[{"name":"alpha-1B adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031692"}


id: SO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous piece of sequence similar to the 'virtual contig' concept of the Ensembl database.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"virtual_sequence","synonyms":[{"name":"virtual sequence","type":"exact"}],"termid":"SO:0000499"}


id: MONDO:0017361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious embryofetopathy that may present in an infant as a result of maternal infection and subsequent fetal infection with rubella virus. CRS can lead to deafness, cataract, and variety of other permanent manifestations including cardiac and neurological defects.","definition_xrefs":["Orphanet:290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubella","termid":"MONDO:0004656"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital rubella syndrome","secondary_identifiers":["MedDRA:10010618","NCIT:C34992","ICD10CM:P35.0","NORD:1681","GARD:4744","UMLS:C0035921","icd11.foundation:1059053724","MEDGEN:19841","NANDO:2200890","EFO:0007218","ICD9:771.0","MESH:D012410","SCTID:1857005"],"synonyms":[{"name":"CRS","type":"exact"},{"name":"Rubella, Congenital","type":"exact"},{"name":"congenital rubella","type":"exact"},{"name":"congenital rubella syndrome","type":"exact"},{"name":"fetal rubella syndrome","type":"exact"},{"name":"foetal rubella syndrome","type":"exact"},{"name":"mother-to-child transmission of rubella syndrome","type":"exact"},{"name":"rubella congenital","type":"exact"}],"termid":"MONDO:0017361","xrefs":{"Monarch":{"xref_id":"0017361"}}}


id: PBO:0076238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 1","termid":"PBO:0076238"}


id: PBO:0080657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 1","termid":"PBO:0080657"}


id: MONDO:0008117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculopharyngodistal myopathy (obsolete MONDO:0008117)","termid":"MONDO:0008117","xrefs":{"Monarch":{"xref_id":"0008117"}}}


id: PBO:0076612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 30","termid":"PBO:0076612"}


id: PATO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000486 moderate response (obsolete PATO:0000486)","termid":"PATO:0000486"}


id: PBO:0034631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_level","termid":"PBO:0034631"}


id: MONDO:0033492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID2 gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Coffin-Siris syndrome 6","secondary_identifiers":["UMLS:C4540499","DOID:0080297","GARD:16254","MEDGEN:1615540","OMIM:617808"],"synonyms":[{"name":"ARID2-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome 6","type":"related"},{"name":"CSS6","type":"related"},{"name":"Coffin-Siris syndrome 6","type":"exact"}],"termid":"MONDO:0033492","xrefs":{"Monarch":{"xref_id":"0033492"}}}


id: GO:0050216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + propane-1,2-diol 1-phosphate = H+ + hydroxyacetone phosphate + NADH.","definition_xrefs":["RHEA:21584","EC:1.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"propanediol-phosphate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04236","MetaCyc:PROPANEDIOL-PHOSPHATE-DEHYDROGENASE-RXN"],"termid":"GO:0050216"}


id: PBO:0027976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene","termid":"PBO:0027976"}


id: PBO:0057421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548w","termid":"PBO:0057421"}


id: GO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:add","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 binding","synonyms":[{"name":"CCL5 binding","type":"exact"},{"name":"RANTES binding","type":"exact"},{"name":"Regulated upon Activation, Normal T-cell Expressed, and Secreted binding","type":"exact"}],"termid":"GO:0071791"}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: GO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"negatively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of blood-brain barrier","synonyms":[{"name":"negative regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090212"}


id: PR:O14290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.04","synonyms":[{"name":"Spom972h-SPAC9E9.04","type":"exact"}],"termid":"PR:O14290"}


id: MONDO:0033542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 70","secondary_identifiers":["MEDGEN:1740270","DOID:0112005","OMIM:618969","UMLS:C5436501"],"synonyms":[{"name":"IMD70","type":"related"},{"name":"IMMUNODEFICIENCY 70","type":"related"}],"termid":"MONDO:0033542","xrefs":{"Monarch":{"xref_id":"0033542"}}}


id: GO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein phosphorylation","synonyms":[{"name":"regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001932"}


id: GO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-sulfoacetaldehyde + H2O = acetate + sulfite.","definition_xrefs":["MetaCyc:SULFOACETALDEHYDE-LYASE-RXN","EC:4.4.1.12"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfoacetaldehyde lyase activity (obsolete GO:0050312)","synonyms":[{"name":"sulphoacetaldehyde lyase activity","type":"exact"}],"termid":"GO:0050312"}


id: GO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["PMID:12044938","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress (obsolete GO:0001306)","termid":"GO:0001306"}


id: PBO:0042862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 92 (putative)","termid":"PBO:0042862"}


id: GO:2000989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hemicellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"negatively_regulates","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of hemicellulose catabolic process","synonyms":[{"name":"negative regulation of hemicellulose catabolism","type":"exact"}],"termid":"GO:2000989"}


id: PBO:0061176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 6-1","termid":"PBO:0061176"}


id: PBO:0040244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 3 pseudogene 1","termid":"PBO:0040244"}


id: MONDO:0021469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the anus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus neoplasm","termid":"MONDO:0003046"},{"relation_name":"is_a","term_name":"benign neoplasm of rectum","termid":"MONDO:0021462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of anus","secondary_identifiers":["SCTID:91978004","UMLS:C0347276","MEDGEN:83864","NCIT:C4611"],"synonyms":[{"name":"anus benign neoplasm","type":"exact"},{"name":"benign anal neoplasm","type":"exact"},{"name":"benign anal tumor","type":"exact"},{"name":"benign anal tumour","type":"exact"},{"name":"benign neoplasm of the anus","type":"exact"},{"name":"benign tumor of anus","type":"exact"},{"name":"benign tumor of the anus","type":"exact"},{"name":"benign tumour of anus","type":"exact"},{"name":"benign tumour of the anus","type":"exact"}],"termid":"MONDO:0021469","xrefs":{"Monarch":{"xref_id":"0021469"}}}


id: PBO:0066882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 182","termid":"PBO:0066882"}


id: PBO:0089264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe accessory factor subunit Hcn1/Apc12","termid":"PBO:0089264"}


id: GO:0045814
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