# terms

id: PBO:0117205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein for Cox2 maturation, human DMAC1 ortholog","termid":"PBO:0117205"}


id: MONDO:1012159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, goat","secondary_identifiers":["OMIA:000631-9925"],"termid":"MONDO:1012159","xrefs":{"Monarch":{"xref_id":"1012159"}}}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_02068","SJAG_00158","SJAG_04790"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75374,75497,77774],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a sterol ester + H2O = a fatty acid + a sterol + H+.","definition_xrefs":["RHEA:10100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"sterol ester esterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.1.13","MetaCyc:STEROL-ESTERASE-RXN","Reactome:R-HSA-8865667","Reactome:R-HSA-192417","Reactome:R-HSA-6813720"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"sterol esterase activity","type":"exact"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: GO:0018844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxytetrahydrofuran = 4-hydroxybutyraldehyde.","definition_xrefs":["UM-BBD_reactionID:r0019"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxytetrahydrofuran isomerase activity (obsolete GO:0018844)","termid":"GO:0018844"}


id: PBO:0027112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_organization","termid":"PBO:0027112"}


id: PBO:0027760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_prospore_membrane","termid":"PBO:0027760"}


id: FYPO:0006090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased peptidase activity","termid":"FYPO:0000667"},{"relation_name":"is_a","term_name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased glutathione hydrolase activity","termid":"FYPO:0006090"}


id: MONDO:0019023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous mastocytosis is a term referring to a group of diseases characterized by abnormal accumulation and proliferation of skin mastocytes. In some cases (most commonly in adults), cutaneous mastocytosis may occur in association with mast cell infiltration of various extracutaneous organs, in which case the disorder is referred to as systemic mastocytosis.","definition_xrefs":["Orphanet:66646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"mastocytosis","termid":"MONDO:0007950"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"cutaneous mastocytosis","secondary_identifiers":["SCTID:397012002","HP:0200151","DOID:3663","MESH:D034701","NCIT:C7137","UMLS:C1136033","MEDGEN:210143","ICDO:9740/1","EFO:1000886","OMIM:154800","GARD:7842","ONCOTREE:CMCD","icd11.foundation:1300710062"],"synonyms":[{"name":"CM","type":"exact"},{"name":"CMCD","type":"related"},{"name":"cutaneous (skin) mastocytosis","type":"exact"},{"name":"cutaneous mastocytosis","type":"exact"},{"name":"cutaneous mastocytosis (disease)","type":"exact"},{"name":"mastocytosis, cutaneous","type":"exact"},{"name":"mastocytosis, systemic, somatic","type":"exact"}],"termid":"MONDO:0019023","xrefs":{"Monarch":{"xref_id":"0019023"}}}


id: GO:0016865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for intramolecular oxidoreductases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intramolecular oxidoreductase activity, other intramolecular oxidoreductases (obsolete GO:0016865)","synonyms":[{"name":"intramolecular isomerase activity, other intramolecular oxidoreductases","type":"exact"},{"name":"intramolecular oxidoreductase activity, other intramolecular oxidoreductases","type":"exact"}],"termid":"GO:0016865"}


id: GO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"positive regulation of (PG)H synthase activity","type":"related"},{"name":"positive regulation of PG synthetase activity","type":"related"},{"name":"positive regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"positive regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060585"}


id: PBO:0047640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 3","termid":"PBO:0047640"}


id: SO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_acetyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_acetyladenosine","secondary_identifiers":["RNAMOD:102"],"synonyms":[{"name":"N6 acetyladenosine","type":"exact"},{"name":"N6-acetyladenosine","type":"exact"},{"name":"ac6A","type":"exact"}],"termid":"SO:0001315"}


id: PBO:0090752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4","termid":"PBO:0090752"}


id: GO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor internalization.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"positively_regulates","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of receptor internalization","synonyms":[{"name":"activation of receptor internalization","type":"narrow"},{"name":"stimulation of receptor internalization","type":"narrow"},{"name":"up regulation of receptor internalization","type":"exact"},{"name":"up-regulation of receptor internalization","type":"exact"},{"name":"upregulation of receptor internalization","type":"exact"}],"termid":"GO:0002092"}


id: PBO:0061808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odr-4 GPCR localization factor homolog","termid":"PBO:0061808"}


id: GO:0044560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of an ion channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation perturbing biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of ion channel activity in other organism","type":"exact"},{"name":"envenomation resulting in regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044560"}


id: SO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified adenine is an adenine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_adenosine","synonyms":[{"name":"modified adenosine","type":"exact"}],"termid":"SO:0001273"}


id: GO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanin-concentrating hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor binding","synonyms":[{"name":"melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031776"}


id: MONDO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-syndactyly-microcephaly is an extremely rare malformation syndrome characterized by the association of partial distal aphalangia with syndactyly, duplication of metatarsal IV, microcephaly, and mild intellectual disability.","definition_xrefs":["Orphanet:1113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"aphalangy-syndactyly-microcephaly syndrome","secondary_identifiers":["MEDGEN:324958","GARD:748","MESH:C563942","OMIM:600384","UMLS:C1838161"],"synonyms":[{"name":"APHALANGIA, partial, with syndactyly and DUPLICATION of metatarsal IV","type":"related"},{"name":"Aphalangia partial with syndactyly and duplication of metatarsal IV","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal 4","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal type 4","type":"exact"}],"termid":"MONDO:0010882","xrefs":{"Monarch":{"xref_id":"0010882"}}}


id: PBO:0111349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp10","termid":"PBO:0111349"}


id: PBO:0028404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquinone_binding","termid":"PBO:0028404"}


id: MONDO:0014361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autism spectrum disorder due to AUTS2 deficiency is a rare genetic syndromic intellectual disability characterized by global developmental delay and borderline to severe intellectual disability, autism spectrum disorder with obsessive behavior, stereotypies, hyperactivity but frequently friendly and affable personality, feeding difficulties, short stature, muscular hypotonia, microcephaly, characteristic dysmorphic features (hypertelorism, high arched eyebrows, ptosis, deep and/or broad nasal bridge, broad/prominent nasal tip, short and/or upturned philtrum, narrow mouth, and micrognathia), and skeletal anomalies (kyphosis and/or scoliosis, arthrogryposis, slender habitus and extremities). Other clinical features may include hernias, congenital heart defects, cryptorchidism and seizures.","definition_xrefs":["Orphanet:352490"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"autism spectrum disorder due to AUTS2 deficiency","secondary_identifiers":["MEDGEN:862872","DOID:0070056","GARD:17520","UMLS:C4014435","OMIM:615834"],"synonyms":[{"name":"ASD due to AUTS2 deficiency","type":"exact"},{"name":"AUTS2 syndrome","type":"exact"},{"name":"MRD26","type":"exact"},{"name":"autism spectrum disorder due to AUTS2 deficiency","type":"exact"},{"name":"autosomal dominant mental retardation 26","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 26","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 26","type":"exact"},{"name":"intellectual disability type 26","type":"exact"},{"name":"mental retardation, autosomal dominant 26","type":"exact"},{"name":"mental retardation, autosomal dominant type 26","type":"exact"}],"termid":"MONDO:0014361","xrefs":{"Monarch":{"xref_id":"0014361"}}}


id: MONDO:0013792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bleeding into one or both cerebral hemispheres including the basal ganglia and the cerebral cortex. It is often associated with hypertension and craniocerebral trauma.","definition_xrefs":["MESH:D002543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracerebral hemorrhage","secondary_identifiers":["MEDGEN:423648","SCTID:274100004","EFO:0005669","ICD9:431","UMLS:C2937358"],"synonyms":[{"name":"stroke, hemorrhagic","type":"exact"}],"termid":"MONDO:0013792","xrefs":{"Monarch":{"xref_id":"0013792"}}}


id: PBO:0064023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 57","termid":"PBO:0064023"}


id: PBO:0036319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog (predicted)","termid":"PBO:0036319"}


id: PBO:0029344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_tRNA_absent_from_cell","termid":"PBO:0029344"}


id: MONDO:0014082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cryptosporidiosis-chronic cholangitis-liver disease syndrome","secondary_identifiers":["DOID:0111982","UMLS:C3554687","GARD:17550","Orphanet:357329","OMIM:615207","MEDGEN:767601"],"synonyms":[{"name":"IL21R immunodeficiency","type":"related"},{"name":"IMD56","type":"related"},{"name":"cryptosporidiosis-chronic cholangitis-liver disease syndrome","type":"exact"},{"name":"immunodeficiency 56","type":"related"}],"termid":"MONDO:0014082","xrefs":{"Monarch":{"xref_id":"0014082"}}}


id: PBO:0116391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein folding chaperone Hsp60/Mcp60","termid":"PBO:0116391"}


id: PBO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor Fep1","termid":"PBO:0000364"}


id: PBO:0054333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1726","termid":"PBO:0054333"}


id: MONDO:0022519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune myocarditis is an autoimmune disease that affects the heart. The condition is characterized by inflammation of the heart muscle (myocardium). Some people with autoimmune myocarditis have no noticeable symptoms of the condition. When present, signs and symptoms may include chest pain, abnormal heartbeat, shortness of breath, fatigue, signs of infection (i.e. fever, headache, sore throat, diarrhea), and leg swelling. The exact underlying cause of the condition is currently unknown; however, autoimmune conditions, in general, occur when the immune system mistakenly attacks healthy tissue. Treatment is based on the signs and symptoms present in each person. In some cases, medications that suppress the immune system may be recommended.","definition_xrefs":["GARD:0009519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"},{"relation_name":"is_a","term_name":"autoimmune cardiomyopathy","termid":"MONDO:0030701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune myocarditis","secondary_identifiers":["UMLS:C1608389","DOID:0080767","MEDGEN:299070","GARD:9519"],"termid":"MONDO:0022519","xrefs":{"Monarch":{"xref_id":"0022519"}}}


id: PBO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 1","termid":"PBO:0044218"}


id: PBO:0055423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2853","termid":"PBO:0055423"}


id: GO:0097654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that is capable of fusing intracellular vesicles to the plasma membrane of platelets for exocytosis of alpha-granules or dense granules. Contains isoforms of VAMP, SNAP and syntaxin proteins. Ternary SNARE complexes interact in a circular array to form ring complexes or channels around the membrane fusion. A common composition in human is VAMP-8, SNAP-23 and syntaxin-2 or -4.","definition_xrefs":["PMID:12130530","PMID:19450911","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"platelet SNARE complex","termid":"GO:0097654"}


id: GO:0061187
data:
  {"annotated_genes":["SJAG_02723","SJAG_03255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106971,77634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of rDNA heterochromatin formation.","definition_xrefs":["PMID:10388812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatin silencing at rDNA","type":"broad"},{"name":"regulation of ribosomal DNA heterochromatin assembly","type":"exact"}],"termid":"GO:0061187","terms_by_termid":{"GO:0061188":null}}


id: GO:1900361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of pentasaccharide transport","termid":"GO:1900360"},{"relation_name":"negatively_regulates","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pentasaccharide transport","synonyms":[{"name":"down regulation of pentasaccharide transport","type":"exact"},{"name":"down-regulation of pentasaccharide transport","type":"exact"},{"name":"downregulation of pentasaccharide transport","type":"exact"},{"name":"inhibition of pentasaccharide transport","type":"narrow"}],"termid":"GO:1900361"}


id: PBO:0109355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and heme transporter 1","termid":"PBO:0109355"}


id: PBO:0058950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKKS centrosomal shuttling protein","termid":"PBO:0058950"}


id: PBO:0043655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit zeta 1","termid":"PBO:0043655"}


id: FYPO:0000986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a higher-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000986)","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000986"}


id: GO:0102973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 malonyl-CoA + 5 H+ + a hexanoyl-[acyl-carrier-protein] = norsolorinate anthrone + 7 coenzyme A + 7 carbon dioxide + 2 H2O + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.221","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"norsolorinate anthrone synthase activity","secondary_identifiers":["MetaCyc:RXN-9479","RHEA:35179"],"synonyms":[{"name":"norsolorinic acid synthase","type":"exact"}],"termid":"GO:0102973"}


id: PBO:0040087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase G","termid":"PBO:0040087"}


id: PBO:0049261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goosecoid homeobox 2","termid":"PBO:0049261"}


id: PBO:0028068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028068"}


id: PBO:0036111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_during_vegetative_growth","termid":"PBO:0036111"}


id: PR:Q9UR05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlc2 gene.","definition_xrefs":["UniProtKB:Q9UR05","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain 1, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.07c","synonyms":[{"name":"Spom972h-dlc2","type":"exact"}],"termid":"PR:Q9UR05"}


id: GO:0089713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heteromeric complex consisting of Cbf1 and basic leucine zipper (bZIP) containing transcriptional activators, Met4 and Met28, that forms over the sequence TCACGTG in the upstream activating sequence (UAS) of genes involved in sulfur amino acid metabolism, resulting in their transcriptional activation.","definition_xrefs":["PMID:9171357","PMID:8665859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cbf1-Met4-Met28 complex","termid":"GO:0089713"}


id: GO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:mah","PMID:10973475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide production","termid":"GO:0002803"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002807"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide biosynthetic process","synonyms":[{"name":"activation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"antibacterial peptide induction","type":"exact"},{"name":"antibacterial polypeptide induction","type":"exact"},{"name":"stimulation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"up regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"up-regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"upregulation of antibacterial peptide biosynthetic process","type":"exact"}],"termid":"GO:0006963"}


id: MONDO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast adenosis characterized by the proliferation of acini, a lobulated architectural pattern, and stromal sclerosis. The luminal epithelial and myopepithelial cells are preserved. Microcalcifications and foci of apocrine metaplasia may be present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibrocystic change, proliferative type","termid":"MONDO:0002585"},{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosing adenosis of breast","secondary_identifiers":["MEDGEN:235582","SCTID:105261000119101","UMLS:C1335931","NCIT:C5205","DOID:8310"],"synonyms":[{"name":"breast sclerosing adenosis","type":"exact"},{"name":"sclerosing adenosis","type":"exact"},{"name":"sclerosing adenosis of the breast","type":"exact"},{"name":"sclerosing breast adenosis","type":"exact"}],"termid":"MONDO:0004531","xrefs":{"Monarch":{"xref_id":"0004531"}}}


id: PBO:0057907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3610","termid":"PBO:0057907"}


id: GO:0046216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole phytoalexins, any indole compound produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044248","GO:0098754","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"indole phytoalexin catabolic process","synonyms":[{"name":"indole phytoalexin breakdown","type":"exact"},{"name":"indole phytoalexin catabolism","type":"exact"},{"name":"indole phytoalexin degradation","type":"exact"}],"termid":"GO:0046216"}


id: MONDO:0020289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital tricuspid malformation","secondary_identifiers":["UMLS:C5681691","MEDGEN:1842501","Orphanet:98721","GARD:19555","HP:0001702"],"termid":"MONDO:0020289","xrefs":{"Monarch":{"xref_id":"0020289"}}}


id: MONDO:0009448
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86580],"is_not":false,"summary":null,"term":"MONDO:0009448"}]},"cv_name":"mondo","definition":"A metabolic disorder resulting from defective renal tube reabsorption of proline, hydroxyproline and glycine. The prevalence is estimated at around 1 in 15 000. The disorder is usually asymptomatic and is identified fortuitously by detection of increased levels of the imino acids and glycine in the urine. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:42062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"iminoglycinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536285","DOID:0112265","GARD:8424","icd11.foundation:664428532","SCTID:84121007","OMIM:242600","UMLS:C0268654","ICD9:270.8","MEDGEN:124342"],"synonyms":[{"name":"iminoglycinuria","type":"exact"},{"name":"iminoglycinuria, digenic","type":"exact"}],"termid":"MONDO:0009448","terms_by_termid":{"MONDO:0009448":null},"xrefs":{"Monarch":{"xref_id":"0009448"}}}


id: PBO:0117377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome large subunit assembly protein Mam33","termid":"PBO:0117377"}


id: RO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite is a plant, and the parasite is parasitic under natural conditions and is also photosynthetic to some degree. Hemiparasites may just obtain water and mineral nutrients from the host plant. Many obtain at least part of their organic nutrients from the host as well.","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiparasite_of","termid":"RO:0002237"}


id: PBO:0085996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; shares a promoter with YNL194C; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YNL195C has a paralog, HBT1, that arose from the whole genome duplication","termid":"PBO:0085996"}


id: PBO:0076879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 3","termid":"PBO:0076879"}


id: PATO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000838 absolute auditory ability value (obsolete PATO:0000838)","termid":"PATO:0000838"}


id: PBO:0079832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin like 1","termid":"PBO:0079832"}


id: GO:0009734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16990790","PMID:18647826","GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to auxin stimulus","termid":"GO:0071365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"auxin-activated signaling pathway","synonyms":[{"name":"auxin mediated signaling pathway","type":"related"},{"name":"auxin mediated signalling","type":"exact"},{"name":"auxin signal transduction","type":"exact"},{"name":"auxin signaling","type":"exact"},{"name":"auxin-regulated transcription","type":"related"}],"termid":"GO:0009734"}


id: PBO:0040168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase (glutamine-hydrolyzing)","termid":"PBO:0040168"}


id: PBO:0041632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 2","termid":"PBO:0041632"}


id: PBO:0090593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal-dependent phosphatase involved in cellular detoxification/metabolite repair (predicted)","termid":"PBO:0090593"}


id: PBO:0084875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP21 exhibits genetic interactions with mutations in the COX2 and COX3 mRNA 5'-untranslated leader sequences","termid":"PBO:0084875"}


id: PBO:0079473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 1","termid":"PBO:0079473"}


id: PBO:0088884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II accessory factor, Cdc73 family","termid":"PBO:0088884"}


id: PBO:0040262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 16 like 1","termid":"PBO:0040262"}


id: PBO:0016971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair (predicted)","termid":"PBO:0016971"}


id: PBO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 39","termid":"PBO:0052747"}


id: GO:1901910
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving adenosine 5'-(hexahydrogen pentaphosphate).","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolism","type":"exact"}],"termid":"GO:1901910","terms_by_termid":{"GO:1901911":null}}


id: PBO:0055534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2970","termid":"PBO:0055534"}


id: PBO:0042360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD109 molecule","termid":"PBO:0042360"}


id: PBO:0062572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily C member 1","termid":"PBO:0062572"}


id: SO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The paternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted","synonyms":[{"name":"paternally imprinted","type":"exact"}],"termid":"SO:0000136"}


id: GO:0008824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanate + H2O = carbamate.","definition_xrefs":["EC:4.2.1.104","RHEA:11120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyanate hydratase activity","secondary_identifiers":["MetaCyc:R524-RXN","UM-BBD_reactionID:r0608"],"synonyms":[{"name":"carbamate hydro-lyase activity","type":"related"},{"name":"cyanase activity","type":"exact"},{"name":"cyanate C-N-lyase activity","type":"related"},{"name":"cyanate aminohydrolase activity","type":"related"},{"name":"cyanate hydrolase activity","type":"related"},{"name":"cyanate lyase activity","type":"exact"}],"termid":"GO:0008824"}


id: GO:0034993
data:
  {"annotated_genes":["SJAG_05196","SJAG_04558","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113145],"is_not":false,"summary":null,"term":"GO:0034993"},{"annotations":[97046,103132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links links the nuclear lumen to cytoplasmic microtubules during meiosis.","definition_xrefs":["PMID:18692466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"},{"relation_name":"part_of","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"meiotic nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LINC complex","type":"exact"},{"name":"LInker of Nucleoskeleton and Cytoskeleton complex","type":"exact"},{"name":"SUN-KASH complex","type":"exact"}],"termid":"GO:0034993","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: PBO:0079204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR2 ribosome maturation factor","termid":"PBO:0079204"}


id: PBO:0027371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_disulfide_oxidoreductase_activity","termid":"PBO:0027371"}


id: PBO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P (predicted)","termid":"PBO:0000184"}


id: GO:0044000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism or its progeny spreads from one location to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in host (obsolete GO:0044000)","synonyms":[{"name":"movement in host environment","type":"related"},{"name":"movement of symbiont in host","type":"exact"},{"name":"movement of symbiont within host","type":"exact"},{"name":"movement within host","type":"exact"},{"name":"symbiont movement in host","type":"exact"},{"name":"symbiont movement within host","type":"related"}],"termid":"GO:0044000"}


id: PBO:0027193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-astral_microtubules_present_in_decreased_numbers","termid":"PBO:0027193"}


id: GO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-3 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"beta-3 adrenergic receptor binding","synonyms":[{"name":"beta-3 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031699"}


id: PBO:0116691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR200B, MIR200A and MIR429 host gene","termid":"PBO:0116691"}


id: GO:0103084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(4'-methylthio)butylmalate = H+ + 2-oxo-7-methylthioheptanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiobutylmalate dehydrogenase activity (obsolete GO:0103084)","termid":"GO:0103084"}


id: PATO:0000722
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000722 relative yield value (obsolete PATO:0000722)","termid":"PATO:0000722"}


id: GO:0012502
data:
  {"annotated_genes":["SJAG_01527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96878],"is_not":false,"summary":null,"term":"GO:0012502"}]},"cv_name":"biological_process","definition":"A process which directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0012503"],"synonyms":[{"name":"induction of non-apoptotic programmed cell death","type":"narrow"},{"name":"induction of nonapoptotic programmed cell death","type":"narrow"}],"termid":"GO:0012502","terms_by_termid":{"GO:0012502":null}}


id: GO:0050265
data:
  {"annotated_genes":["SJAG_02370","SJAG_02383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80066,80195],"is_not":false,"summary":null,"term":"GO:0050265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["EC:2.7.7.52","MetaCyc:RNA-URIDYLYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"RNA uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8941312","RHEA:14785"],"synonyms":[{"name":"TUT activity","type":"related"},{"name":"UTP:RNA uridylyltransferase activity","type":"exact"},{"name":"poly(U) polymerase activity","type":"exact"},{"name":"polynucleotide uridylyltransferase activity","type":"exact"},{"name":"terminal uridylyltransferase activity","type":"related"}],"termid":"GO:0050265","terms_by_termid":{"GO:0050265":null}}


id: FYPO:0004001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular glutathione level","synonyms":[{"name":"normal cellular GSH level","type":"exact"},{"name":"normal cellular L-gamma-glutamyl-L-cysteinylglycine level","type":"exact"},{"name":"normal cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutathione level during vegetative growth","type":"exact"},{"name":"normal cellular reduced glutathione level","type":"exact"},{"name":"normal glutathione accumulation","type":"related"}],"termid":"FYPO:0004001"}


id: PBO:0089075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf9","termid":"PBO:0089075"}


id: GO:0140592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 8) = S-adenosyl-L-homocysteine + (histone H3-N-methyl-arginine (position 8). This reaction is the addition of a methyl group to the arginine residue at position 8 of histone H3.","definition_xrefs":["PMID:20708585","PMID:31533925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0008276","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"histone H3R8 methyltransferase activity","synonyms":[{"name":"histone H3R8 arginine methylase activity","type":"exact"},{"name":"histone H3R8 arginine methyltransferase activity","type":"exact"},{"name":"histone methyltransferase activity (H3-R8 specific)","type":"exact"},{"name":"histone-H3R8 methyltransferase activity","type":"exact"}],"termid":"GO:0140592"}


id: MONDO:0006896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the esophagus that is caused by the reflux of gastric juice with contents of the stomach and duodenum.","definition_xrefs":["MESH:D004942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"peptic ulcer disease","termid":"MONDO:0004247"},{"relation_name":"is_a","term_name":"esophageal ulcer","termid":"MONDO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"peptic esophagitis","secondary_identifiers":["SCTID:57643001","MEDGEN:5028","DOID:13976","UMLS:C0014869","ICD9:530.11","EFO:1001095"],"synonyms":[{"name":"peptic esophagitis","type":"exact"},{"name":"peptic reflux disease","type":"exact"},{"name":"reflux esophagitis","type":"exact"},{"name":"reflux oesophagitis","type":"exact"}],"termid":"MONDO:0006896","xrefs":{"Monarch":{"xref_id":"0006896"}}}


id: GO:0052117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in host environment (obsolete GO:0052117)","synonyms":[{"name":"aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052117"}


id: FYPO:0007343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished lipid droplet formation","synonyms":[{"name":"abolished lipid droplet assembly","type":"exact"},{"name":"abolished lipid particle formation","type":"exact"},{"name":"lipid droplet formation abolished","type":"exact"}],"termid":"FYPO:0007343"}


id: PBO:0049372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 2","termid":"PBO:0049372"}


id: MONDO:0009361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked hydrocephalus with stenosis of the aqueduct of Sylvius","termid":"MONDO:0010611"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive hydrocephalus due to congenital stenosis of aqueduct of Sylvius","secondary_identifiers":["OMIM:236635","MEDGEN:608953","UMLS:C0431355"],"synonyms":[{"name":"aqueductal stenosis","type":"related"},{"name":"hydrocephalus due to congenital stenosis of aqueduct of Sylvius","type":"exact"}],"termid":"MONDO:0009361","xrefs":{"Monarch":{"xref_id":"0009361"}}}


id: PBO:0060262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenic factor 5","termid":"PBO:0060262"}


id: PBO:0078898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-2","termid":"PBO:0078898"}


id: PBO:0073318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 1","termid":"PBO:0073318"}


id: PBO:0084267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane peptide transporter; mediates transport of di- and tri-peptides; conserved protein that contains 12 transmembrane domains; PTR2 expression is regulated by the N-end rule pathway via repression by Cup9p","termid":"PBO:0084267"}


id: PBO:0065638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 13","termid":"PBO:0065638"}


id: PBO:0117435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2A regulated lncRNA","termid":"PBO:0117435"}


id: MONDO:0013607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"GATA2 deficiency with susceptibility to MDS/AML","termid":"MONDO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"monocytopenia with susceptibility to infections","secondary_identifiers":["GARD:10934","DOID:0111947","OMIM:614172","icd11.foundation:1077753382","MEDGEN:481660","UMLS:C3280030","Orphanet:228423"],"synonyms":[{"name":"DCML","type":"related"},{"name":"Dendritic cell, monocyte, B and NK lymphoid deficiency","type":"exact"},{"name":"Dendritic cell, monocyte, B lymphocyte, and natural Killer lymphocyte deficiency","type":"related"},{"name":"GATA2 deficiency","type":"related"},{"name":"IMD21","type":"related"},{"name":"MonoMAC","type":"exact"},{"name":"combined immunodeficiency with susceptibility to mycobacterial, viral and fungal infections","type":"exact"},{"name":"combined immunodeficiency with susceptibility to mycobacterial, viral, and fungal infections","type":"related"},{"name":"immunodeficiency 21","type":"related"},{"name":"immunodeficiency type 21","type":"exact"},{"name":"monocyte - B - natural killer - dendritic cell deficiency","type":"related"},{"name":"monocyte-B-natural killer-dendritic cell deficiency syndrome","type":"exact"},{"name":"monocytopenia and mycobacterial infection syndrome","type":"exact"},{"name":"monocytopenia with susceptibility to mycobacterial, fungal, and Papillomavirus infections and myelodysplasia","type":"related"}],"termid":"MONDO:0013607","xrefs":{"Monarch":{"xref_id":"0013607"}}}


id: GO:0046473
data:
  {"annotated_genes":["SJAG_01519","SJAG_01036","SJAG_01957","SJAG_02654","SJAG_04323","SJAG_04883","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62422,93399,72018,105210,71419,78126,71882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_01519":null,"SJAG_01957":null,"SJAG_02654":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidic acid metabolism","type":"exact"}],"termid":"GO:0046473","terms_by_termid":{"GO:0006654":null}}


id: PBO:0075978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 4","termid":"PBO:0075978"}


id: GO:0035641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific movement from place to place of an organism in response to a novel environment.","definition_xrefs":["PMID:17151232","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"exploration behavior","termid":"GO:0035640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotory exploration behavior","termid":"GO:0035641"}


id: MONDO:0006503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete episodic ataxia (obsolete MONDO:0006503)","termid":"MONDO:0006503","xrefs":{"Monarch":{"xref_id":"0006503"}}}


id: MONDO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder involving inflammation of the gums; may affect surrounding and supporting structures of the teeth.","definition_xrefs":["NCIT:C34636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival disorder","termid":"MONDO:0002021"},{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingivitis","secondary_identifiers":["ICD9:523.0","SCTID:66383009","ICD9:523.10","MESH:D005891","MEDGEN:4895","UMLS:C0017574","DOID:3087","ICD9:523.1"],"synonyms":[{"name":"acute gingivitis","type":"narrow"},{"name":"chronic gingivitis","type":"narrow"},{"name":"gingiva inflammation","type":"exact"},{"name":"gingivitis","type":"exact"},{"name":"inflammation of gingiva","type":"exact"}],"termid":"MONDO:0002508","xrefs":{"Monarch":{"xref_id":"0002508"}}}


id: PBO:0077473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 192","termid":"PBO:0077473"}


id: PBO:0004535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSP1 family protein","termid":"PBO:0004535"}


id: PATO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000777 long term memory value (obsolete PATO:0000777)","termid":"PATO:0000777"}


id: PBO:0084878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; PET123 exhibits genetic interactions with PET122, which encodes a COX3 mRNA-specific translational activator","termid":"PBO:0084878"}


id: PBO:0058598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6730","termid":"PBO:0058598"}


id: PBO:0027221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_present_in_increased_numbers","termid":"PBO:0027221"}


id: PBO:0050382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 6","termid":"PBO:0050382"}


id: PBO:0065571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin reductase 2","termid":"PBO:0065571"}


id: PBO:0068956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 200, pseudogene","termid":"PBO:0068956"}


id: MONDO:0023619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lentigo maligna melanoma (LMM) is a type of skin cancer that usually develops in older, fair-skinnedadults. The average age of diagnosis is65. LMM is thought to be caused by a history of sun exposure to the affected area. Treatment includes surgery to remove as much of the LMM as possible.","definition_xrefs":["GARD:0009962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"lentigo maligna melanoma","secondary_identifiers":["ICDO:8742/3","ONCOTREE:SKLMM","MEDGEN:439437","UMLS:C2739810","icd11.foundation:2011782924","ICD9:172.8","SCTID:302837001","NCIT:C9151"],"synonyms":[{"name":"Hutchison melanotic freckle","type":"related"},{"name":"LMM","type":"related"},{"name":"SKLMM","type":"related"},{"name":"lentigo maligna melanoma","type":"exact"},{"name":"malignant lentigo melanoma","type":"exact"}],"termid":"MONDO:0023619","xrefs":{"Monarch":{"xref_id":"0023619"}}}


id: GO:0047733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-D-glucose = CDP-4-dehydro-6-deoxy-D-glucose + H2O.","definition_xrefs":["EC:4.2.1.45","RHEA:17153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"CDP-glucose 4,6-dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02426","MetaCyc:CDP-GLUCOSE-46-DEHYDRATASE-RXN"],"synonyms":[{"name":"CDP-glucose 4,6-hydro-lyase (CDP-4-dehydro-6-deoxy-D-glucose-forming)","type":"related"},{"name":"CDP-glucose 4,6-hydro-lyase activity","type":"related"},{"name":"CDPglucose 4,6-dehydratase activity","type":"related"},{"name":"CDPglucose 4,6-hydro-lyase activity","type":"related"},{"name":"cytidine diphosphoglucose oxidoreductase activity","type":"related"}],"termid":"GO:0047733"}


id: GO:0044463
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell projection, a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell projection part (obsolete GO:0044463)","termid":"GO:0044463"}


id: PR:P40901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asc-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative amino-acid permease isp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.09","secondary_identifiers":["UniProtKB:P40901"],"synonyms":[{"name":"Spom972h-SLC7A10","type":"exact"}],"termid":"PR:P40901"}


id: MOD:00644
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with an acetoxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetylated residue","synonyms":[{"name":"OAcRes","type":"exact"}],"termid":"MOD:00644"}


id: PBO:0065168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase 1","termid":"PBO:0065168"}


id: SO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes exon sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:exonic","type":"exact"},{"name":"Jannovar:exon_variant","type":"exact"},{"name":"VAAST:exon_variant","type":"exact"},{"name":"exon variant","type":"exact"},{"name":"snpEff:EXON","type":"exact"}],"termid":"SO:0001791"}


id: GO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = 3-phenylpyruvate + L-glutamate.","definition_xrefs":["PMID:18394996","RHEA:25152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"L-phenylalanine-2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:RXN-10814","KEGG_REACTION:R00694"],"synonyms":[{"name":"L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080130"}


id: GO:0016052
data:
  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chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"catabolic 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catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:24699070":null},"secondary_identifiers":["GO:0044724","GO:0044276","GO:0006095"],"synonyms":[{"name":"carbohydrate breakdown","type":"exact"},{"name":"carbohydrate catabolism","type":"exact"},{"name":"carbohydrate degradation","type":"exact"},{"name":"catabolic carbohydrate metabolic process","type":"exact"},{"name":"catabolic carbohydrate metabolism","type":"exact"},{"name":"multicellular organismal carbohydrate catabolic process","type":"narrow"},{"name":"single-organism carbohydrate catabolic 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id: MONDO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"eosinophilic variant of chromophobe renal cell carcinoma","secondary_identifiers":["UMLS:C1333405","MEDGEN:232458","NCIT:C27889","DOID:6606"],"synonyms":[{"name":"eosinophilic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003942","xrefs":{"Monarch":{"xref_id":"0003942"}}}


id: GO:0019976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-2 binding","synonyms":[{"name":"IL-2 binding","type":"exact"}],"termid":"GO:0019976"}


id: PBO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 25","termid":"PBO:0048901"}


id: GO:0047830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-(D-1-carboxyethyl)-L-arginine + NAD+ + H2O = L-arginine + pyruvate + NADH.","definition_xrefs":["MetaCyc:D-OCTOPINE-DEHYDROGENASE-RXN","EC:1.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-octopine dehydrogenase activity","secondary_identifiers":["RHEA:16285"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)-L-arginine:NAD+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"D-octopine synthase activity","type":"related"},{"name":"N2-(D-1-carboxyethyl)-L-arginine:NAD+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"ODH activity","type":"related"},{"name":"octopine dehydrogenase activity","type":"related"},{"name":"octopine:NAD oxidoreductase activity","type":"related"}],"termid":"GO:0047830"}


id: MONDO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the UBERON:0035289.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast axillary tail cancer","secondary_identifiers":["SCTID:188156001","UMLS:C0153554","ICD9:174.6","ICD10CM:C50.6","DOID:1650","MEDGEN:509328"],"synonyms":[{"name":"axillary tail of breast cancer","type":"exact"},{"name":"cancer of axillary tail of breast","type":"exact"},{"name":"malignant axillary tail of breast neoplasm","type":"exact"},{"name":"malignant neoplasm of axillary tail of breast","type":"exact"},{"name":"malignant neoplasm of axillary tail of female breast","type":"exact"}],"termid":"MONDO:0002069","xrefs":{"Monarch":{"xref_id":"0002069"}}}


id: GO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA + NADPH + H+ = 4 CoA + isoliquiritigenin + 3 CO2 + NADP+ + H2O.","definition_xrefs":["EC:2.3.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"6'-deoxychalcone synthase activity","secondary_identifiers":["MetaCyc:RXN-3142","RHEA:10584"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing, reducing) activity","type":"related"}],"termid":"GO:0033808"}


id: MONDO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the pharynx.","definition_xrefs":["NCIT:C102872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx cancer","termid":"MONDO:0005517"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pharyngeal squamous cell carcinoma","secondary_identifiers":["DOID:0050921","EFO:1001965","MEDGEN:728086","SCTID:408649007","UMLS:C1319317"],"synonyms":[{"name":"pharyngeal (including hypopharyngeal and oropharyngeal) squamous cell carcinoma","type":"exact"},{"name":"pharyngeal squam. cell carcinoma","type":"exact"},{"name":"pharyngeal squamous cell carcinoma","type":"exact"},{"name":"pharyngeal throat squamous cell cancer","type":"exact"},{"name":"pharynx squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0000536","xrefs":{"Monarch":{"xref_id":"0000536"}}}


id: PBO:0086343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability","termid":"PBO:0086343"}


id: PBO:0034044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_muscle_antagonist","termid":"PBO:0034044"}


id: GO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell as part of an immune response.","definition_xrefs":["GOC:add","PMID:12093005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"},{"relation_name":"is_a","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002298"}


id: PBO:0031467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031467"}


id: GO:0072627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-28A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-28A production","secondary_identifiers":["GO:0072628"],"synonyms":[{"name":"IL-28A production","type":"exact"},{"name":"IL28A production","type":"exact"},{"name":"interferon lambda 2 production","type":"exact"},{"name":"interleukin-28A secretion","type":"narrow"}],"termid":"GO:0072627"}


id: MONDO:0022109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete catatrichy (obsolete MONDO:0022109)","secondary_identifiers":["MESH:C535346","OMIM:116850"],"synonyms":[{"name":"forelock","type":"related"}],"termid":"MONDO:0022109","xrefs":{"Monarch":{"xref_id":"0022109"}}}


id: GO:0000019
data:
  {"annotated_genes":["SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination during mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic recombination","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of recombination within rDNA repeats","type":"narrow"}],"termid":"GO:0000019","terms_by_termid":{"GO:0045951":null}}


id: GO:0042218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate biosynthetic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate anabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate biosynthesis","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate formation","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate synthesis","type":"exact"}],"termid":"GO:0042218"}


id: MONDO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare intoxication due to medical products (obsolete MONDO:0017633)","secondary_identifiers":["Orphanet:306640"],"termid":"MONDO:0017633","xrefs":{"Monarch":{"xref_id":"0017633"}}}


id: PBO:0058005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3928","termid":"PBO:0058005"}


id: MONDO:0012154
data:
  {"annotated_genes":["SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86398],"is_not":false,"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"Any myopia in which the cause of the disease is a mutation in the SCO2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536105","OMIM:608908","UMLS:C1837148","GARD:9937","MEDGEN:324696"],"synonyms":[{"name":"MYP6","type":"related"},{"name":"SCO2 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in SCO2","type":"exact"},{"name":"myopia 6","type":"exact"},{"name":"myopia type 6","type":"exact"},{"name":"myopia, susceptibility to","type":"related"}],"termid":"MONDO:0012154","terms_by_termid":{"MONDO:0012154":null},"xrefs":{"Monarch":{"xref_id":"0012154"}}}


id: MONDO:0007249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptobrachydactyly is an extremely rare brachydactyly syndrome, characterized by short broad hands and feet with brachydactyly associated with congenital flexion contractures of the proximal and/or distal interphalangeal joints of the fingers, as well as syndactyly of feet. Polydactyly, septate vagina and urinary incontinence were also occasionally reported. Camptobrachydactyly has been described in 18 members of 1 family, suggesting an autosomal dominant inheritance. There have been no further descriptions in the literature since 1972.","definition_xrefs":["Orphanet:1319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptobrachydactyly","secondary_identifiers":["MESH:C537967","SCTID:733045005","UMLS:C1861963","OMIM:114150","GARD:1062","MEDGEN:349399"],"synonyms":[{"name":"camptobrachydactyly","type":"exact"},{"name":"short foot/brachydactyly of toes, camptodactyly, brachydactyly","type":"related"}],"termid":"MONDO:0007249","xrefs":{"Monarch":{"xref_id":"0007249"}}}


id: PBO:0047641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 4","termid":"PBO:0047641"}


id: PBO:0027550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_telomere","termid":"PBO:0027550"}


id: PBO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A1","termid":"PBO:0039612"}


id: PBO:0038647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 2","termid":"PBO:0038647"}


id: FYPO:0003185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule cytoskeleton during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule cytoskeleton during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0003185"}


id: PBO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.17","termid":"PBO:0002621"}


id: MONDO:0700001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary complication of an underlying autoimmune disorder that is reported in association with systemic lupus erythematosus (SLE). Reduced lung volumes result in restrictive ventilatory defect and a preserved carbon monoxide transfer coefficient.","definition_xrefs":["PMID:21686610","PMID:24836585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shrinking lung syndrome","secondary_identifiers":["MEDGEN:743060","UMLS:C1960277"],"synonyms":[{"name":"SLS","type":"exact"},{"name":"shrinking of the lung","type":"broad"},{"name":"small lungs","type":"related"}],"termid":"MONDO:0700001","xrefs":{"Monarch":{"xref_id":"0700001"}}}


id: PBO:0038364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulated_by","termid":"PBO:0038364"}


id: PBO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0000827"}


id: PBO:0052865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-8","termid":"PBO:0052865"}


id: GO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FACT complex.","definition_xrefs":["PMID:10682845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FACT complex binding","termid":"GO:0062059"}


id: PBO:0114495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates peroxisome populations; interacts with Pex11p, Pex25p, and Pex27p to control both constitutive peroxisome division and peroxisome morphology and abundance during peroxisome proliferation; mediates contacts between mitochondria and peroxisomes that stimulate transport of citrate, converted from acetyl-CoA, from peroxisomes to mitochondria; peroxisomal integral membrane protein that is enriched at peroxisomal-mitochondrial (PerMit) contact sites","termid":"PBO:0114495"}


id: GO:0006778
data:
  {"annotated_genes":["SJAG_01155","SJAG_00366","SJAG_00699","SJAG_02896","SJAG_02876","SJAG_05283","SJAG_03961","SJAG_01192","SJAG_04109","SJAG_01786","SJAG_03173","SJAG_03862","SJAG_01841","SJAG_04944","SJAG_00097","SJAG_04515","SJAG_01372","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80405,78716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[74702,101413,112184,114180,105515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[106919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[59192,63011,60269,63149,67757,57225,80275,64833],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[77147,71737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[75134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["ISBN:0198506732","GOC:jl","Wikipedia:Porphyrin#Natural_formation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-189445"],"synonyms":[{"name":"porphyrin metabolic process","type":"related"},{"name":"porphyrin metabolism","type":"related"}],"termid":"GO:0006778","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: GO:0099189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the spectrin-associated cytoskeleton contained within the postsynapse.","definition_xrefs":["GOC:dos","PMID:28576936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spectrin-associated cytoskeleton","termid":"GO:0014731"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton","termid":"GO:0099189"}


id: PBO:0055892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 10B","termid":"PBO:0055892"}


id: MONDO:0013701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MRT32 (obsolete MONDO:0013701)","secondary_identifiers":["OMIM:614339"],"termid":"MONDO:0013701","xrefs":{"Monarch":{"xref_id":"0013701"}}}


id: PBO:0069648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 925, pseudogene","termid":"PBO:0069648"}


id: GO:0050932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pigmented cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigment cell differentiation","termid":"GO:0050932"}


id: PBO:0003068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription termination factor Reb1","termid":"PBO:0003068"}


id: MONDO:0015169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by chronic diarrhea in infancy or childhood in association with intestinal glucoamylase deficiency.","definition_xrefs":["Orphanet:103907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"chronic diarrheal disease","termid":"MONDO:0044751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"chronic diarrhea due to glucoamylase deficiency","secondary_identifiers":["NANDO:2200911","icd11.foundation:2084206046","GARD:19838","MEDGEN:898614","UMLS:C4275068","SCTID:716277000"],"synonyms":[{"name":"chronic diarrhea due to glucoamylase deficiency","type":"exact"},{"name":"maltase glucoamylase deficiency","type":"related"},{"name":"maltase-glucoamylase deficiency","type":"exact"}],"termid":"MONDO:0015169","xrefs":{"Monarch":{"xref_id":"0015169"}}}


id: FYPO:0007397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell is abolished.","definition_xrefs":["PomBase:mah","GO:0140420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished heme import","synonyms":[{"name":"abolished haem import","type":"exact"},{"name":"abolished heme import during mitotic cell cycle","type":"related"},{"name":"abolished heme import during vegetative growth","type":"exact"},{"name":"abolished heme import into cell","type":"exact"},{"name":"heme import abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0007397"}


id: PBO:0075443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spartin","termid":"PBO:0075443"}


id: FYPO:0003857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mevastatin. Cells stop growing (and may die) at a concentration of mevastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to mevastatin","synonyms":[{"name":"hypersensitive to mevastatin","type":"exact"},{"name":"sensitive to compactin","type":"exact"},{"name":"sensitive to mevastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to mevastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003857"}


id: PR:G2TRQ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.17","synonyms":[{"name":"Spom972h-tam11","type":"exact"},{"name":"transcripts altered in meiosis protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ6"}


id: GO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which sodium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium channel complex","termid":"GO:0034706"}


id: PBO:0087398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress inducible cytoplasmic thioredoxin peroxidase; cooperates with Tsa1p in the removal of reactive oxygen, nitrogen and sulfur species using thioredoxin as hydrogen donor; deletion enhances the mutator phenotype of tsa1 mutants; protein abundance increases in response to DNA replication stress; TSA2 has a paralog, TSA1, that arose from the whole genome duplication","termid":"PBO:0087398"}


id: PR:000085727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 and phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046.","definition_xrefs":["PomBase:VW","PMID:19362535","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me(K9),Phos(S10)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K9-methylated and phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K9MePhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"related"},{"name":"hht2/Me(K9),Phos(S10)","type":"exact"}],"termid":"PR:000085727"}


id: PBO:0052289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratocan","termid":"PBO:0052289"}


id: GO:1904145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["PMID:22674394","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of oocyte maturation","termid":"GO:1900194"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903538"},{"relation_name":"negatively_regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"down regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"down-regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"downregulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"inhibition of meiotic cell cycle process involved in oocyte maturation","type":"narrow"}],"termid":"GO:1904145"}


id: MONDO:0013367
data:
  {"annotated_genes":["SJAG_03764"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87710],"is_not":false,"summary":null,"term":"MONDO:0013367"}]},"cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the KCNH2 gene, encoding potassium voltage-gated channel subfamily H member 2. It is characterized by a prolonged QT interval that may result in torsade de pointes, ventricular fibrillation and/or sudden cardiac death.","definition_xrefs":["NCIT:C137957"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03764":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3150943","DOID:0110645","GARD:3285","HGNC:6251","MEDGEN:462293","MESH:C563614","OMIM:613688"],"synonyms":[{"name":"LQT2","type":"exact"},{"name":"Long QT syndrome, acquired, reduced susceptibility to","type":"exact"},{"name":"long QT syndrome 1/2, digenic","type":"related"},{"name":"long QT syndrome 2","type":"exact"},{"name":"long QT syndrome 2, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome 2/3, digenic","type":"related"},{"name":"long QT syndrome 2/5, digenic","type":"related"},{"name":"long QT syndrome 2/9, digenic","type":"related"},{"name":"long QT syndrome type 2","type":"exact"}],"termid":"MONDO:0013367","terms_by_termid":{"MONDO:0013367":null},"xrefs":{"Monarch":{"xref_id":"0013367"}}}


id: PBO:0080131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VANGL planar cell polarity protein 1","termid":"PBO:0080131"}


id: PBO:0065095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAG2 antisense RNA 2","termid":"PBO:0065095"}


id: PBO:0055717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase maturation factor 2","termid":"PBO:0055717"}


id: MOD:00210
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively monooxygenates an L-cysteine residue to L-cysteine sulfenic acid.","definition_xrefs":["PubMed:10964927","OMSSA:193","PubMed:2501303","DeltaMass:41","PubMed:8756456","PubMed:9214307","PubMed:9586994","RESID:AA0205","Unimod:35#C","PubMed:9587003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine sulfenic acid","synonyms":[{"name":"(2R)-2-amino-3-(hydroxysulfanyl)propanoic acid","type":"exact"},{"name":"(2R)-2-amino-3-(oxido-lambda(4)-sulfanyl)propanoic acid [tautomer]","type":"exact"},{"name":"2-amino-2-carboxyethanesulfenic acid","type":"exact"},{"name":"2-amino-3-sulfinylpropanoic acid [tautomer]","type":"exact"},{"name":"3-sulfenoalanine","type":"exact"},{"name":"ACT_SITE Cysteine sulfenic acid (-SOH) intermediate","type":"exact"},{"name":"CysOH","type":"exact"},{"name":"L-cysteine sulfenic acid","type":"exact"},{"name":"MOD_RES Cysteine sulfenic acid (-SOH)","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"S-hydroxycysteine","type":"exact"},{"name":"S-oxocysteine [tautomer]","type":"exact"},{"name":"S-oxycysteine [tautomer]","type":"exact"},{"name":"Sulfenic Acid (from Cysteine)","type":"exact"},{"name":"cysteine S-oxide [tautomer]","type":"exact"},{"name":"cysteine sulfoxide [tautomer]","type":"exact"},{"name":"cysteine sulphenic acid","type":"exact"},{"name":"mod193","type":"exact"}],"termid":"MOD:00210"}


id: MONDO:0021546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymal tumor that arises from the spinal cord.","definition_xrefs":["NCIT:C131526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord glioma","termid":"MONDO:0002542"},{"relation_name":"is_a","term_name":"ependymal tumor","termid":"MONDO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ependymal tumor of spinal cord","secondary_identifiers":["UMLS:C4318747","MEDGEN:1389203"],"synonyms":[{"name":"ependymal tumor of spinal cord","type":"exact"},{"name":"spinal cord ependymal tumor","type":"exact"},{"name":"spinal cord ependymal tumour","type":"exact"}],"termid":"MONDO:0021546","xrefs":{"Monarch":{"xref_id":"0021546"}}}


id: PBO:0073332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 7 pseudogene 1","termid":"PBO:0073332"}


id: MONDO:1011691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet function defect, non-human animal","secondary_identifiers":["OMIA:000803"],"termid":"MONDO:1011691","xrefs":{"Monarch":{"xref_id":"1011691"}}}


id: MONDO:0007917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema-cerebral arteriovenous anomaly syndrome is characterized by the variable association of a cerebrovascular malformation, foot lymphoedema and primary pulmonary hypertension. It has been described in a woman and four of her children.","definition_xrefs":["Orphanet:86914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphedema-cerebral arteriovenous anomaly syndrome","secondary_identifiers":["UMLS:C1835272","MEDGEN:322617","GARD:9217","MESH:C563612","OMIM:152900"],"synonyms":[{"name":"lymphedema and cerebral arteriovenous anomaly","type":"related"},{"name":"primary pulmonary hypertension, cerebrovascular malformation and lymphedema feet","type":"related"}],"termid":"MONDO:0007917","xrefs":{"Monarch":{"xref_id":"0007917"}}}


id: GO:1990733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed between the N-terminus of the giant sarcomeric filament protein titin and the Z-disk ligand, telethonin. The complex is part of the Z-disk of the skeletal and cardiac sarcomere. Telethonin binding to titin might be essential for the initial assembly, stabilization and functional integrity of the titin filament, and hence important for muscle contraction relaxation in mature myofibrils.","definition_xrefs":["GOC:ame","PMID:16407954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"Z disc","termid":"GO:0030018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"titin-telethonin complex","synonyms":[{"name":"Titin-Tcap complex","type":"related"}],"termid":"GO:1990733"}


id: PBO:0077716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 2","termid":"PBO:0077716"}


id: PR:O94341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.08c gene.","definition_xrefs":["UniProtKB:O94341","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1271.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.08c","synonyms":[{"name":"Spom972h-SPBC1271.08c","type":"exact"}],"termid":"PR:O94341"}


id: PBO:0049198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin-related inter-fiber protein","termid":"PBO:0049198"}


id: PBO:0071263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 8","termid":"PBO:0071263"}


id: PBO:0044707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 1","termid":"PBO:0044707"}


id: MONDO:0019441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary Transthyretin (TTR)-related systemic amyloidosis (ATTR) with predominant cardiac involvement resulting from myocardial infiltration of abnormal amyloid protein.","definition_xrefs":["Orphanet:85451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"amyloidosis, hereditary systemic 1","termid":"MONDO:0971004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0021179","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"ATTRV122I amyloidosis","secondary_identifiers":["ICD10EXP:E85.4+","MEDGEN:907865","UMLS:C4275067","GARD:16755","SCTID:715655000","ICD10EXP:I43.1*","icd11.foundation:1449168185"],"synonyms":[{"name":"ATTRV122I-related amyloidosis","type":"exact"}],"termid":"MONDO:0019441","xrefs":{"Monarch":{"xref_id":"0019441"}}}


id: GO:0050477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-acyl-L-lysine = L-lysine + a carboxylate.","definition_xrefs":["EC:3.5.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-lysine deacylase activity","secondary_identifiers":["RHEA:24548","MetaCyc:ACYL-LYSINE-DEACYLASE-RXN"],"synonyms":[{"name":"6-N-acyl-L-lysine amidohydrolase activity","type":"related"},{"name":"N6-acyl-L-lysine amidohydrolase activity","type":"related"},{"name":"epsilon-lysine acylase activity","type":"related"}],"termid":"GO:0050477"}


id: PBO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 23","termid":"PBO:0071417"}


id: PBO:0110162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-34 deaminase subunit Tad2","termid":"PBO:0110162"}


id: MONDO:0015587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic epilepsy characterized by speech disorder (including a range of symptoms from dysarthria, speech dyspraxia, receptive and expressive language delay/regression and acquired aphasia to subtle impairments of conversational speech) and epilepsy (mostly focal and secondary generalized childhood-onset seizures, sometimes with aura). Mild to severe intellectual disability may also be observed.","definition_xrefs":["Orphanet:163721"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"rolandic epilepsy-speech dyspraxia syndrome","secondary_identifiers":["MEDGEN:1633042","icd11.foundation:288052868","GARD:17002","UMLS:C4707308"],"termid":"MONDO:0015587","xrefs":{"Monarch":{"xref_id":"0015587"}}}


id: PBO:0048436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)","termid":"PBO:0048436"}


id: GO:0061089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sequestering of zinc ion (obsolete GO:0061089)","termid":"GO:0061089"}


id: GO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transposition of transposable elements or transposons. Transposases are involved in recombination required for transposition and are site-specific for the transposon/transposable element.","definition_xrefs":["ISBN:0198506732","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"transposase activity","secondary_identifiers":["GO:0004804"],"synonyms":[{"name":"P-element encoded transposase activity","type":"narrow"}],"termid":"GO:0004803"}


id: GO:0102985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z)-hexadecenoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (9Z,12Z)-hexadecadienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Also converts (9Z)-octadecenoyl-CoA into (9Z,12Z)-octadecadienoyl-CoA. This microsomal enzyme introduces a cis double bond at position 12 of fatty-acyl-CoAs that contain a cis double bond at position 9.","definition_xrefs":["EC:1.14.19.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"delta12-fatty-acid desaturase activity","termid":"GO:0102985"}


id: PBO:0043203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1A","termid":"PBO:0043203"}


id: PBO:0077980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 3-1","termid":"PBO:0077980"}


id: GO:2000448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"positively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"positive regulation of MIF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000448"}


id: PBO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036217"}


id: GO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sarcomere","secondary_identifiers":["Wikipedia:Sarcomere"],"termid":"GO:0030017"}


id: FYPO:0008065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is decreased after phosphate removal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased sporulation frequency","termid":"FYPO:0000584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased sporulation frequency during phosphate starvation","termid":"FYPO:0008065"}


id: PBO:0056854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA SH3 domain containing","termid":"PBO:0056854"}


id: MONDO:0008673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrofacialdysostosis, Weyers type (WAD) is a rare ectodermal dysplasia syndrome with bone abnormalities characterized by onychodystrophy; anomalies of the lower jaw, oral vestibule and dentition; post-axialpolydactyly; moderately restricted growth with short limbs; and normal intelligence. Although it closely resembles Ellis-van Creveld syndrome, an allelic disorder and another type of ciliopathy, WAD is usually a milder disease without the presence of heart abnormalities and is inherited in an autosomal dominant manner.","definition_xrefs":["Orphanet:952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005093"],"is_obsolete":false,"name":"acrofacial dysostosis, Weyers type","secondary_identifiers":["MEDGEN:141594","OMIM:193530","GARD:497","icd11.foundation:547338814","MESH:C536695","SCTID:277807007","ICD9:520.8","DOID:0111571","UMLS:C0457013"],"synonyms":[{"name":"Weyers acrodental dysostosis","type":"exact"},{"name":"Weyers acrofacial dysostosis","type":"exact"},{"name":"acrodental dysostosis of Weyers","type":"related"},{"name":"acrofacial dysostosis of Weyers","type":"related"},{"name":"curry Hall syndrome","type":"related"},{"name":"curry-Hall syndrome","type":"exact"},{"name":"wad","type":"related"}],"termid":"MONDO:0008673","xrefs":{"Monarch":{"xref_id":"0008673"}}}


id: RO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y).","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_during_or_after","termid":"RO:0002496"}


id: MONDO:0008374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone dystrophy","termid":"MONDO:0000455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal cone dystrophy type 1","secondary_identifiers":["GARD:3196","MEDGEN:356747","DOID:0081024","MESH:C566719","OMIM:180020","UMLS:C1867326"],"synonyms":[{"name":"RCD1","type":"related"},{"name":"cone dystrophy autosomal dominant","type":"related"},{"name":"cone dystrophy, autosomal dominant","type":"related"},{"name":"retinal cone Degeneration","type":"related"},{"name":"retinal cone dystrophy 1","type":"related"},{"name":"retinal cone dystrophy-1","type":"exact"}],"termid":"MONDO:0008374","xrefs":{"Monarch":{"xref_id":"0008374"}}}


id: PBO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 3","termid":"PBO:0061569"}


id: MONDO:1010854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Krabbe disease that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease, non-human animal","termid":"MONDO:1010170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Krabbe disease, Rhesus monkey","secondary_identifiers":["OMIA:000578-9544"],"termid":"MONDO:1010854","xrefs":{"Monarch":{"xref_id":"1010854"}}}


id: PBO:0079461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 1","termid":"PBO:0079461"}


id: PBO:0061347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 5","termid":"PBO:0061347"}


id: MONDO:1011803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), non-human animal","secondary_identifiers":["OMIA:001621"],"termid":"MONDO:1011803","xrefs":{"Monarch":{"xref_id":"1011803"}}}


id: PBO:0063118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 4","termid":"PBO:0063118"}


id: MONDO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphangioleiomyomatosis (obsolete MONDO:0002607)","termid":"MONDO:0002607","xrefs":{"Monarch":{"xref_id":"0002607"}}}


id: GO:0000448
data:
  {"annotated_genes":["SJAG_01581","SJAG_03789","SJAG_02374","SJAG_02275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71875,92034,95294,104432],"is_not":false,"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000490"],"synonyms":[{"name":"cleavage at C2","type":"related"},{"name":"cleavage in ITS2 of tricistronic rRNA transcript to separate 5.8S and LSU rRNAs (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"GO:0000448","terms_by_termid":{"GO:0000448":null}}


id: GO:1902100
data:
  {"annotated_genes":["SJAG_03353","SJAG_03681","SJAG_01330","SJAG_04699","SJAG_01515","SJAG_01297","SJAG_02451","SJAG_03327","SJAG_01837","SJAG_04884","SJAG_01679","SJAG_02169","SJAG_02336","SJAG_00883","SJAG_04259","SJAG_03126","SJAG_01082","SJAG_04999","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91061,107548,108568,114087,114574,99914,116202,104211,112269],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[106637,114800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[75749,116968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[114803,115858,106639,102117,110216,99758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[99019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[94536],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[114092],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116975],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101659],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"down-regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"downregulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"inhibition of metaphase/anaphase transition of cell cycle","type":"narrow"}],"termid":"GO:1902100","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0000261"}


id: FYPO:0001511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, cell shape is altered, and cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001121"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"inviable lumpy cell","type":"related"},{"name":"inviable vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"inviable vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"inviable vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell, abnormal cell shape, normal cell size","type":"exact"}],"termid":"FYPO:0001511"}


id: PBO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 173 pseudogene","termid":"PBO:0070235"}


id: PBO:0062348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 1 pseudogene","termid":"PBO:0062348"}


id: GO:0042131
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110765,110766],"is_not":false,"summary":null,"term":"GO:0042131"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine phosphate + H2O = thiamine + phosphate.","definition_xrefs":["PMID:197075","RHEA:47948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"thiamine phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.3.100"],"synonyms":[{"name":"ThMPase","type":"exact"},{"name":"thiamin monophosphate phosphatase","type":"exact"},{"name":"thiamin phosphate phosphatase activity","type":"exact"}],"termid":"GO:0042131","terms_by_termid":{"GO:0042131":null}}


id: PBO:0027585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_homologous_chromosome_segregation","termid":"PBO:0027585"}


id: GO:0031080
data:
  {"annotated_genes":["SJAG_02094","SJAG_01293","SJAG_01374","SJAG_04017","SJAG_04148","SJAG_03299","SJAG_00471","SJAG_02424","SJAG_03907","SJAG_03986"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70746,72123,73193,73401,73997,74398,78427,80773,89346,110167],"is_not":false,"summary":null,"term":"GO:0031080"}]},"cv_name":"cellular_component","definition":"A subcomplex of the nuclear pore complex (NPC) that forms the outer rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two outer rings each contain multiple copies of the following proteins: Nup133p, Nup120p, Nup145Cp, Nup85p, Nup84p, Seh1p, and Sec13p. In vertebrates, the two outer rings each contain multiple copies of the following proteins: Nup133, Nup160, Nup96, Nup75, Nup107, Seh1, Sec13, Nup43, Nup37, and ALADIN. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup84 complex (S. cerevisiae) or the Nup107-160 complex (vertebrates).","definition_xrefs":["PMID:18046406","PMID:19524430","GOC:dgf","PMID:22419078","PMID:20947011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_01293":null,"SJAG_01374":null,"SJAG_02094":null,"SJAG_02424":null,"SJAG_03299":null,"SJAG_03907":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005643","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear pore outer ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Nup107-120 complex","type":"exact"},{"name":"Nup107-160 complex","type":"exact"},{"name":"Nup84 complex","type":"exact"}],"termid":"GO:0031080","terms_by_termid":{"GO:0031080":null}}


id: PBO:0066518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 3","termid":"PBO:0066518"}


id: GO:0033452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GUG codon-amino acid adaptor activity","synonyms":[{"name":"GTG codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033452"}


id: GO:0044859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protein is incorporated into a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane raft","termid":"GO:0044860"},{"relation_name":"is_a","term_name":"protein insertion into membrane raft","termid":"GO:0071210"},{"relation_name":"is_a","term_name":"protein insertion into plasma membrane","termid":"GO:0098737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein insertion into plasma membrane raft","termid":"GO:0044859"}


id: PBO:0064415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8B","termid":"PBO:0064415"}


id: PBO:0053831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1096","termid":"PBO:0053831"}


id: MONDO:0008246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pigmented paravenous retinochoroidal atrophy (PPRCA) is a rare, commonly bilateral and symmetric retinal disease characterized by non-progressive or slowly progressive chorioretinal atrophy, peripapillary pigmentary changes and accumulation of ''bone-corpuscle'' pigmentation along the retinal veins and which is usually asymptomatic or can present with mild blurred vision.","definition_xrefs":["Orphanet:251295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pigmented paravenous retinochoroidal atrophy","secondary_identifiers":["SCTID:723450004","MEDGEN:401413","GARD:17208","icd11.foundation:1278139412","OMIM:172870","UMLS:C1868310","MESH:C566801","DOID:0111541","ICD10CM:H35.5"],"synonyms":[{"name":"PPCRA","type":"related"},{"name":"PPRCA","type":"exact"},{"name":"pigmented paravenous chorioretinal atrophy","type":"related"}],"termid":"MONDO:0008246","xrefs":{"Monarch":{"xref_id":"0008246"}}}


id: PBO:0077878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid peroxidase","termid":"PBO:0077878"}


id: PBO:0081900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 852","termid":"PBO:0081900"}


id: BFO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"realizes","termid":"BFO:0000055"}


id: GO:1903248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of citrulline biosynthetic process.","definition_xrefs":["PMID:19278978","GOC:TermGenie","GO_REF:0000058","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"citrulline biosynthetic process","termid":"GO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of citrulline biosynthetic process","synonyms":[{"name":"regulation of citrulline anabolism","type":"exact"},{"name":"regulation of citrulline biosynthesis","type":"exact"},{"name":"regulation of citrulline formation","type":"exact"},{"name":"regulation of citrulline synthesis","type":"exact"}],"termid":"GO:1903248"}


id: GO:1905449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18832707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"regulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905449"}


id: PBO:0089163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (2Fe-2S) cluster assembly chaperone Ssc1","termid":"PBO:0089163"}


id: PBO:0048284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 18","termid":"PBO:0048284"}


id: GO:0103020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-D-xylulose + ATP = H+ + 1-deoxy-D-xylulose 5-phosphate + ADP.","definition_xrefs":["PMID:11168365","GOC:pz","PMID:16920870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1-deoxy-D-xylulose kinase activity","secondary_identifiers":["MetaCyc:RXN0-382","RHEA:27990"],"termid":"GO:0103020"}


id: PBO:0086256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking; binds phosphatidylinositol 4-phosphate, which plays a role in TGN localization; has homology to gamma-adaptin; GGA2 has a paralog, GGA1, that arose from the whole genome duplication","termid":"PBO:0086256"}


id: PBO:0069218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 473, pseudogene","termid":"PBO:0069218"}


id: MONDO:0017442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of thigh and lower leg with foot present","secondary_identifiers":["SCTID:55852007","ICD10CM:Q72.1","GARD:21193","ICD9:755.33","MEDGEN:539373","icd11.foundation:1165997650","Orphanet:294977","UMLS:C0265626"],"synonyms":[{"name":"Femorotibiofibular intercalary transverse meromelia","type":"exact"}],"termid":"MONDO:0017442","xrefs":{"Monarch":{"xref_id":"0017442"}}}


id: PBO:0083709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-membrane protein; subunit of evolutionarily conserved EMC (Endoplasmic Reticulum Membrane Complex) implicated in ERAD (ER-associated degradation) and proper assembly of multi-pass transmembrane (TM) proteins; EMC acts in yeast as an ER-mitochondria tether that interacts with outer membrane protein Tom5 of TOM (Translocase of the Mitochondrial Outer Membrane) complex; suppressor of pma1-7, deletion of SOP4 slows down export of wild-type Pma1p and Pma1-7 from the ER","termid":"PBO:0083709"}


id: PBO:0029952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_sister_chromatid_separation","termid":"PBO:0029952"}


id: MONDO:0043541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis resulting from viral infection.","definition_xrefs":["NCIT:C34509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"},{"relation_name":"is_a","term_name":"viral eye infection","termid":"MONDO:0020950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"viral conjunctivitis","secondary_identifiers":["icd11.foundation:157616931","MESH:D003236","UMLS:C0009774","EFO:0008571","SCTID:45261009","MEDGEN:3212"],"synonyms":[{"name":"Conjunctivitides, viral","type":"related"},{"name":"Viruses caused conjunctivitis (disease)","type":"exact"},{"name":"Viruses conjunctivitis (disease)","type":"exact"},{"name":"viral Conjunctivitides","type":"related"},{"name":"viral conjunctivitis","type":"exact"}],"termid":"MONDO:0043541","xrefs":{"Monarch":{"xref_id":"0043541"}}}


id: PBO:0034799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex subunit Ufd1 (predicted)","termid":"PBO:0034799"}


id: PBO:0063790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 19","termid":"PBO:0063790"}


id: MONDO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kluver Bucy syndrome is a rare behavioral impairment characterized by inappropriate sexual behaviors and mouthing of objects. Other signs and symptoms include diminished ability to visually recognize objects,loss of normal fear and anger responses, memory loss, distractibility, seizures, and dementia. It is associated with damage to the anterior temporal lobes of the brain. Cases have been reported in association with herpes encephalitis and head trauma. Treatment is symptomatic and may include the use of psychotropic medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kluver-Bucy syndrome","secondary_identifiers":["UMLS:C0270707","GARD:6840","MESH:D020232","DOID:2510","EFO:0007335","MedDRA:10066431","MEDGEN:124361","NCIT:C84802","MONDO:0015527","NORD:1338","Orphanet:157823","SCTID:10651001"],"synonyms":[{"name":"KLuever-Bucy syndrome","type":"related"},{"name":"KLüver-Bucy syndrome","type":"exact"},{"name":"Kluver Bucy syndrome","type":"related"},{"name":"Klver-Bucy syndrome","type":"exact"},{"name":"bilateral temporal lobe disorder","type":"related"},{"name":"memory loss, extreme sexual behavior, placidity, and visual distractibility","type":"related"},{"name":"post-encephalitic Kluver Bucy syndrome (type)","type":"related"},{"name":"post-traumatic Kluver Bucy syndrome (type)","type":"related"},{"name":"syndrome, Kluver-Bucy","type":"related"},{"name":"temporal lobectomy behavior syndrome","type":"related"},{"name":"temporal lobectomy behaviour syndrome","type":"related"}],"termid":"MONDO:0005817","xrefs":{"Monarch":{"xref_id":"0005817"}}}


id: GO:0015345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ferric enterobactin(out) + H+(out) = ferric enterobactin(in) + H+(in).","definition_xrefs":["TC:2.A.1.16.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ferric enterobactin:proton symporter activity","synonyms":[{"name":"ferric enterobactin:hydrogen symporter activity","type":"exact"},{"name":"ferric-enterobactin:proton symporter activity","type":"exact"}],"termid":"GO:0015345"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:21734642","GOC:bhm","PMID:28966424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: PBO:0050185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 2","termid":"PBO:0050185"}


id: PBO:0082104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; mutations in human PEX6 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082104"}


id: PBO:0083390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps IES1/YFL013C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083390"}


id: PBO:0087525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle","termid":"PBO:0087525"}


id: PBO:0005064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP-glucose-1-phosphate uridylyltransferase (predicted)","termid":"PBO:0005064"}


id: FYPO:0005304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through interphase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic interphase","synonyms":[{"name":"decreased rate of mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression during vegetative growth","type":"related"},{"name":"increased duration of interphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic interphase during vegetative growth","type":"exact"},{"name":"prolonged mitotic interphase","type":"exact"},{"name":"reduced rate of mitotic interphase progression","type":"related"}],"termid":"FYPO:0005304"}


id: PBO:0076340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 8","termid":"PBO:0076340"}


id: PBO:0061372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 32","termid":"PBO:0061372"}


id: GO:0103045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + acetyl-CoA = N-acetyl-L-methionine + coenzyme A + H+.","definition_xrefs":["RHEA:44144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"L-methionine N-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-6948"],"termid":"GO:0103045"}


id: MOD:00298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, an L-glutamic acid residue, an L-histidine residue, an L-serine residue and a one-nickel three-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["PubMed:2550436","RESID:AA0293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"Ni-3Fe-2S-3O cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"hybrid nickel-triiron cluster","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O3-serinyl 2-nickel-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","type":"exact"}],"termid":"MOD:00298"}


id: PBO:0048072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 23","termid":"PBO:0048072"}


id: MONDO:0011442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any advanced sleep phase syndrome in which the cause of the disease is a mutation in the PER2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"advanced sleep phase syndrome","termid":"MONDO:0015609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced sleep phase syndrome 1","secondary_identifiers":["GARD:15368","UMLS:C3807327","OMIM:604348","MEDGEN:813657","DOID:0110011"],"synonyms":[{"name":"FASPS1","type":"exact"},{"name":"PER2 advanced sleep phase syndrome","type":"exact"},{"name":"advanced sleep phase syndrome caused by mutation in PER2","type":"exact"},{"name":"advanced sleep phase syndrome type 1","type":"exact"},{"name":"advanced sleep phase syndrome, familial, 1","type":"related"},{"name":"advanced sleep phase syndrome, familial, type 1","type":"exact"},{"name":"familial advanced sleep phase syndrome 1","type":"exact"}],"termid":"MONDO:0011442","xrefs":{"Monarch":{"xref_id":"0011442"}}}


id: GO:0071137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the cell surface antigen CD98.","definition_xrefs":["PMID:18032696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-CD98 complex","synonyms":[{"name":"ITGAV-ITGB3-SLC3A2 complex","type":"narrow"}],"termid":"GO:0071137"}


id: MONDO:0009277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of congenital glaucoma caused by mutation(s) in the CYP1B1 gene, encoding cytochrome P450 1B1.","definition_xrefs":["NCIT:C148260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hydrophthalmos (obsolete MONDO:0006788)","termid":"MONDO:0006788"},{"relation_name":"is_a","term_name":"CYP1B1-related glaucoma with or without anterior segment dysgenesis","termid":"MONDO:0800472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3A","secondary_identifiers":["MEDGEN:383912","ICD9:743.21","OMIM:231300","GARD:18224","Orphanet:98976","UMLS:C1856439","DOID:11211"],"synonyms":[{"name":"GLC3A","type":"related"},{"name":"Primary Congenital glaucoma 3A","type":"exact"},{"name":"buphthalmos","type":"broad"},{"name":"glaucoma 3, primary congenital, A","type":"related"},{"name":"glaucoma 3, primary congenital, type a","type":"exact"},{"name":"glaucoma 3A, primary open angle, congenital, juvenile, or adult onset","type":"exact"},{"name":"glaucoma, congenital","type":"related"},{"name":"glaucoma, primary open angle, adult-onset","type":"related"},{"name":"glaucoma, primary open angle, juvenile-onset","type":"related"},{"name":"simple buphthalmos","type":"exact"}],"termid":"MONDO:0009277","xrefs":{"Monarch":{"xref_id":"0009277"}}}


id: MONDO:0016169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of acquired peripheral neuropathy.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic acquired demyelinating polyneuropathy (obsolete MONDO:0016169)","secondary_identifiers":["Orphanet:208974"],"synonyms":[{"name":"CADP","type":"exact"},{"name":"acquired peripheral neuropathy, chronic","type":"exact"},{"name":"chronic acquired peripheral neuropathy","type":"exact"}],"termid":"MONDO:0016169","xrefs":{"Monarch":{"xref_id":"0016169"}}}


id: MONDO:0011946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diaphanospondylodysostosis is characterized by absent ossification of the vertebral bodies and sacrum associated with variable anomalies. It has been described in less than ten patients from different families. Manifestations include a short neck, a short wide thorax, a reduced number of ribs, a narrow pelvis, and inconstant anomalies such as myelomeningocele, cystic kidneys with nephrogenic rests, and cleft palate.","definition_xrefs":["Orphanet:66637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphanospondylodysostosis","secondary_identifiers":["MESH:C564305","OMIM:608022","SCTID:721094006","UMLS:C1842691","GARD:16674","icd11.foundation:508093071","MEDGEN:374993"],"synonyms":[{"name":"diaphanospondylodysostosis","type":"exact"},{"name":"vertebral ossification, defect in, with nephrogenic rests","type":"exact"}],"termid":"MONDO:0011946","xrefs":{"Monarch":{"xref_id":"0011946"}}}


id: GO:0060100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"is_a","term_name":"positive regulation of membrane invagination","termid":"GO:1905155"},{"relation_name":"positively_regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"}


id: PBO:0087141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that may be involved in translational regulation; binds specific categories of mRNAs, including those that contain upstream open reading frames (uORFs) and internal ribosome entry sites (IRES); interacts genetically with chromatin remodelers and splicing factors, linking chromatin state, splicing and as a result mRNA maturation","termid":"PBO:0087141"}


id: GO:1904479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal absorption.","definition_xrefs":["PMID:12469120","GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"negatively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal absorption","synonyms":[{"name":"down regulation of intestinal absorption","type":"exact"},{"name":"down-regulation of intestinal absorption","type":"exact"},{"name":"downregulation of intestinal absorption","type":"exact"},{"name":"inhibition of intestinal absorption","type":"narrow"}],"termid":"GO:1904479"}


id: GO:0160134
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100785],"is_not":false,"summary":null,"term":"GO:0160134"}]},"cv_name":"molecular_function","definition":"A protein adaptor activity characterized by the capacity to selectively recognize and interact with RNA molecules in a sequence-specific manner. Entities possessing this activity typically exhibit discerning binding preferences for specific nucleotide sequences within RNA molecules, enabling the identification and engagement of distinct RNA motifs or structural elements. This function is integral to various biological processes, including RNA processing, transport, and regulatory mechanisms, contributing to the specificity and precision of cellular RNA-related activities.","definition_xrefs":["PMID:17036044","PMID:14749727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"protein-RNA sequence-specific adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160134","terms_by_termid":{"GO:0160134":null}}


id: GO:0060929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to atrioventricular (AV) node cell fates and their capacity to differentiate into AV node cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell fate commitment","termid":"GO:0060927"},{"relation_name":"part_of","term_name":"atrioventricular node cell differentiation","termid":"GO:0060922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular node cell fate commitment","synonyms":[{"name":"AV node cell fate commitment","type":"exact"}],"termid":"GO:0060929"}


id: GO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tooth development process in which the teeth enter the mouth and become visible.","definition_xrefs":["Wikipedia:Tooth_eruption"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth eruption","termid":"GO:0044691"}


id: MONDO:0037807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of glycerol metabolic process.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolism disease","termid":"MONDO:0037792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycerol metabolism disease","secondary_identifiers":["SCTID:237977000","MEDGEN:575210","UMLS:C0342762"],"synonyms":[{"name":"disorder of glycerol metabolic process","type":"exact"},{"name":"disorder of glycerol metabolism","type":"exact"},{"name":"glycerol metabolic process disease","type":"exact"}],"termid":"MONDO:0037807","xrefs":{"Monarch":{"xref_id":"0037807"}}}


id: GO:0003947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + (N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide = UDP + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide.","definition_xrefs":["EC:2.4.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:12588","MetaCyc:2.4.1.92-RXN","Reactome:R-HSA-8856223"],"synonyms":[{"name":"GM2 synthase activity","type":"related"},{"name":"GM2/GD2-synthase activity","type":"related"},{"name":"GalNAc-T activity","type":"related"},{"name":"UDP acetylgalactosamine-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:1-O-[O-(N-acetyl-alpha-neuraminosyl)-(2->3)-O-beta-D-galactopyranosyl-(1->4)-beta-D-glucopyranosyl]-ceramide 1,4-beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine GM3 N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"asialo-GM2 synthase activity","type":"related"},{"name":"beta-1,4N-aetylgalactosaminyltransferase activity","type":"related"},{"name":"ganglioside GM2 synthase activity","type":"related"},{"name":"ganglioside GM3 acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminylgalactosylglucosylceramide acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-ganglioside GM3 acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-hematoside acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0003947"}


id: MONDO:0025303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder caused by infection with Anaplasma.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplasmosis","secondary_identifiers":["MEDGEN:8053","SCTID:13906002","UMLS:C0002797","NCIT:C128425","SCTID:427481004","ICD9:082.49","MESH:D000712"],"synonyms":[{"name":"anaplasma caused disease or disorder","type":"exact"},{"name":"anaplasma disease or disorder","type":"exact"},{"name":"anaplasma infectious disease","type":"exact"},{"name":"anaplasmoses","type":"exact"},{"name":"human anaplasmosis","type":"exact"}],"termid":"MONDO:0025303","xrefs":{"Monarch":{"xref_id":"0025303"}}}


id: GO:0006751
data:
  {"annotated_genes":["SJAG_00903","SJAG_03316","SJAG_01612","SJAG_04858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74021,76986,78924,102579],"is_not":false,"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_03316":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"glutathione catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutathione breakdown","type":"exact"},{"name":"glutathione catabolism","type":"exact"},{"name":"glutathione degradation","type":"exact"}],"termid":"GO:0006751","terms_by_termid":{"GO:0006751":null}}


id: PBO:0003636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5 (predicted)","termid":"PBO:0003636"}


id: PBO:0048956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 7","termid":"PBO:0048956"}


id: PBO:0113501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trimeric heat shock transcription factor; forms condensate with Mediator and RNA Pol II upon heat shock; activates multiple genes in response to diverse stresses and transient intracellular acidification; recognizes variable heat shock elements (HSEs) consisting of inverted NGAAN repeats; monitors translational status through RQC (Ribosomal Quality Control)-mediated translation-stress signal; human homolog HSF1 with linker region mutations can complement yeast hsf1 mutant","termid":"PBO:0113501"}


id: PBO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during_which_ends","termid":"PBO:0017474"}


id: GO:1900704
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siderophore biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of siderochrome biosynthesis","type":"narrow"},{"name":"regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"regulation of siderophore anabolism","type":"exact"},{"name":"regulation of siderophore biosynthesis","type":"exact"},{"name":"regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"regulation of siderophore formation","type":"exact"},{"name":"regulation of siderophore synthesis","type":"exact"}],"termid":"GO:1900704","terms_by_termid":{"GO:1905569":null}}


id: MONDO:0012164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meacham syndrome is a multiple malformation syndrome characterized by congenital diaphragmatic abnormalities, genital defects and cardiac malformations.","definition_xrefs":["Orphanet:3097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meacham syndrome","secondary_identifiers":["UMLS:C1837026","GARD:3432","icd11.foundation:1307620543","OMIM:608978","MESH:C538162","SCTID:722461004","MEDGEN:373234"],"synonyms":[{"name":"Double vagina, cardiac, pulmonary, and other genital malformations with 46,XY karyotype","type":"related"},{"name":"Meacham Winn Culler syndrome","type":"related"},{"name":"Meacham syndrome","type":"exact"},{"name":"Meacham-Winn-Culler syndrome","type":"exact"},{"name":"Rhabdomyomatous dysplasia-cardiopathy-genital anomalies syndrome","type":"exact"}],"termid":"MONDO:0012164","xrefs":{"Monarch":{"xref_id":"0012164"}}}


id: GO:0000245
data:
  {"annotated_genes":["SJAG_02185","SJAG_02058","SJAG_01214","SJAG_04214","SJAG_00058","SJAG_05009","SJAG_00249","SJAG_00474","SJAG_03983","SJAG_01008","SJAG_02573","SJAG_01440","SJAG_00911","SJAG_01015","SJAG_03214","SJAG_03995","SJAG_02279","SJAG_02843","SJAG_00322","SJAG_00225","SJAG_01654","SJAG_00498","SJAG_02304","SJAG_05231","SJAG_04163","SJAG_00313","SJAG_04911","SJAG_04230","SJAG_02558","SJAG_01870","SJAG_04538","SJAG_03469","SJAG_01301","SJAG_00147"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72468,72726,74258,76029,76358,79311,93720,102061,105815],"is_not":false,"summary":null,"term":"GO:0000245"},{"annotations":[118130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[73490,101569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[95263,115549,91904,79909,110379,112676,102866,95516,113585,106202,110940,103027,95935,94339,110954,98163],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[119019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[74610,77630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[112758,107083,114157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.","definition_xrefs":["PMID:9476892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02058":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02573":null,"SJAG_02843":null,"SJAG_03214":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04230":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0016071","GO:0044085","GO:0010467","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"spliceosomal complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spliceosome assembly","type":"broad"}],"termid":"GO:0000245","terms_by_termid":{"GO:0000245":null,"GO:0000348":null,"GO:0000354":null,"GO:0000389":null,"GO:0000395":null,"GO:0006376":null,"GO:1903241":null}}


id: PBO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF1 pseudogene 1","termid":"PBO:0043828"}


id: PBO:0044133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 divergent transcript","termid":"PBO:0044133"}


id: MONDO:0023607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laurence-Prosser-Rocker syndrome","secondary_identifiers":["MEDGEN:419133","UMLS:C2931651","MESH:C537882"],"synonyms":[{"name":"Hirschsprung's disease associated with congenital heart malformation, broad big toes, and ulnar polydactyly","type":"related"},{"name":"Hirschsprung's disease associated with ulnar polydactyly, polysyndactyly of big toes and ventricular septal defect","type":"related"}],"termid":"MONDO:0023607","xrefs":{"Monarch":{"xref_id":"0023607"}}}


id: FYPO:0004667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) at the centromeric regions during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion at centromere","synonyms":[{"name":"normal meiotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"normal sister chromatid cohesion at centromere during meiosis","type":"exact"}],"termid":"FYPO:0004667"}


id: GO:0030627
data:
  {"annotated_genes":["SJAG_00058","SJAG_03983"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79908,113588],"is_not":false,"summary":null,"term":"GO:0030627"}]},"cv_name":"molecular_function","definition":"Binding to a pre-mRNA 5' splice site sequence.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA binding","termid":"GO:0036002"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_03983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"pre-mRNA 5'-splice site binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pre-mRNA 5' splice site binding","type":"exact"}],"termid":"GO:0030627","terms_by_termid":{"GO:0030627":null}}


id: GO:0008861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + formate = CoA + pyruvate.","definition_xrefs":["RHEA:11844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acetyltransferase activity","termid":"GO:0016453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"formate C-acetyltransferase activity","secondary_identifiers":["MetaCyc:PYRUVFORMLY-RXN","EC:2.3.1.54"],"synonyms":[{"name":"PFL","type":"exact"},{"name":"formate acetyltransferase activity","type":"related"}],"termid":"GO:0008861"}


id: PBO:0039680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 1","termid":"PBO:0039680"}


id: MONDO:0007572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary familial polycythemia is an inherited hematological disorder resulting from mutations in the erythropoietin (EPO) receptor and is characterized by an elevated absolute red blood cell mass caused by uncontrolled red blood cell production in the presence of low EPO levels.","definition_xrefs":["Orphanet:90042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"primary familial polycythemia due to EPO receptor mutation","secondary_identifiers":["DOID:0060652","icd11.foundation:962836252","UMLS:C4551637","ICD9:289.6","MEDGEN:1641215","OMIM:133100","GARD:9843","SCTID:17342003"],"synonyms":[{"name":"ECYT1","type":"related"},{"name":"EPOR familial polycythemia","type":"exact"},{"name":"PFCP","type":"exact"},{"name":"autosomal dominant benign erythrocytosis","type":"related"},{"name":"congenital erythrocytosis due to erythropoietin receptor mutation","type":"exact"},{"name":"congenital polycythemia due to erythropoietin receptor mutation","type":"exact"},{"name":"erythrocytosis autosomal dominant benign","type":"related"},{"name":"erythrocytosis, autosomal dominant benign","type":"related"},{"name":"erythrocytosis, familial, 1","type":"exact"},{"name":"erythrocytosis, familial, type 1","type":"exact"},{"name":"erythrocytosis, somatic","type":"exact"},{"name":"familial erythrocytosis","type":"exact"},{"name":"familial erythrocytosis 1","type":"exact"},{"name":"familial erythrocytosis type 1","type":"exact"},{"name":"familial erythrocytosis, 1","type":"exact"},{"name":"familial polycythemia caused by mutation in EPOR","type":"exact"},{"name":"polycythemia, primary familial and congenital","type":"related"},{"name":"primary congenital erythrocytosis","type":"exact"},{"name":"primary familial and congenital polycythemia","type":"exact"},{"name":"primary familial polycythemia","type":"related"}],"termid":"MONDO:0007572","xrefs":{"Monarch":{"xref_id":"0007572"}}}


id: GO:0009622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to pathogenic fungi (obsolete GO:0009622)","synonyms":[{"name":"resistance to pathogenic fungi","type":"exact"}],"termid":"GO:0009622"}


id: MONDO:1012587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in American mink due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, American mink","secondary_identifiers":["OMIA:000202-452646"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Neovison vison (American mink)","type":"exact"}],"termid":"MONDO:1012587","xrefs":{"Monarch":{"xref_id":"1012587"}}}


id: MONDO:0056816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma that arises from the vulva. This category includes small cell and large cell neuroendocrine carcinoma. Most small cell neuroendocrine carcinomas of the vulva are Merkel cell carcinomas.","definition_xrefs":["NCIT:C128243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:925534","UMLS:C4288002"],"synonyms":[{"name":"mammalian vulva neuroendocrine carcinoma","type":"exact"},{"name":"neuroendocrine carcinoma of mammalian vulva","type":"exact"},{"name":"vulvar Neuroendocrine cancer","type":"exact"},{"name":"vulvar Neuroendocrine carcinoma","type":"exact"},{"name":"vulvar high grade Neuroendocrine carcinoma","type":"exact"},{"name":"vulvar high grade Neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0056816","xrefs":{"Monarch":{"xref_id":"0056816"}}}


id: GO:2001065
data:
  {"annotated_genes":["SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118822],"is_not":false,"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to mannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mannan binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoglycan binding","type":"related"}],"termid":"GO:2001065","terms_by_termid":{"GO:2001065":null}}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: GO:0007117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bud portion of a cell that reproduces by budding irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"},{"relation_name":"part_of","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell bud growth","synonyms":[{"name":"bud growth","type":"broad"}],"termid":"GO:0007117"}


id: GO:0007284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic divisions of the primary spermatogonial cell (a primordial male germ cell) to form secondary spermatogonia (primary spermatocytes).","definition_xrefs":["GOC:bf","ISBN:0879694238","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatogonial cell division","synonyms":[{"name":"spermatogonium division","type":"exact"}],"termid":"GO:0007284"}


id: FYECO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a copper chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ copper chelator","synonyms":[{"name":"+ tetrathiomolybdate","type":"narrow"}],"termid":"FYECO:0000321"}


id: PBO:0067626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 798, pseudogene","termid":"PBO:0067626"}


id: MONDO:0019088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-transplant lymphoproliferative disorder (PTLD) is a polyclonal (benign) or clonal (malignant) proliferation of lymphoid cells that develops as a consequence of immunosuppression in a recipient of a solid organ or bone marrow allograft. PTLDs comprise a spectrum ranging from early, Epstein-Barr virus (EBV)-driven polyclonal lymphoid proliferations to EBV-positive or EBV- negative lymphomas of predominantly B-cell or less often T-cell type. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"},{"relation_name":"excluded_subClassOf","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"},{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-transplant lymphoproliferative disease","secondary_identifiers":["UMLS:C0432487","SCTID:254290004","MEDGEN:98160","ICDO:9971/1","NORD:1950","Orphanet:70568","MedDRA:10051358","NCIT:C4727","GARD:9553"],"synonyms":[{"name":"PTLD","type":"exact"},{"name":"post-transplant lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0019088","xrefs":{"Monarch":{"xref_id":"0019088"}}}


id: MONDO:0044737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive complex spastic paraplegia due to kennedy pathway dysfunction","secondary_identifiers":["Orphanet:506353","MEDGEN:1799999","UMLS:C5568576","DOID:0112349","GARD:17946"],"synonyms":[{"name":"autosomal recessive complex SPG due to Kennedy pathway dysfunction","type":"exact"}],"termid":"MONDO:0044737","xrefs":{"Monarch":{"xref_id":"0044737"}}}


id: GO:0005649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transportin (obsolete GO:0005649)","synonyms":[{"name":"karyopherin-beta2","type":"exact"},{"name":"transportin","type":"exact"}],"termid":"GO:0005649"}


id: MONDO:0001138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A angiodysplasia that involves the intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiodysplasia","termid":"MONDO:0002322"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"angiodysplasia of intestine","secondary_identifiers":["ICD9:569.84","UMLS:C0267367","MEDGEN:540621","SCTID:235853006","ICD9:569.85","DOID:10846"],"synonyms":[{"name":"intestine angiodysplasia","type":"exact"}],"termid":"MONDO:0001138","xrefs":{"Monarch":{"xref_id":"0001138"}}}


id: FYPO:0005825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to iron","synonyms":[{"name":"hypersensitive to iron","type":"exact"},{"name":"sensitive to iron during mitotic cell cycle","type":"related"},{"name":"sensitive to iron during vegetative growth","type":"exact"},{"name":"sensitive to iron ions","type":"exact"}],"termid":"FYPO:0005825"}


id: GO:0099104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a potassium channel, resulting in its opening.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel regulator activity","termid":"GO:0015459"},{"relation_name":"is_a","term_name":"channel activator activity","termid":"GO:0099103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"potassium channel activator activity","termid":"GO:0099104"}


id: PBO:0049807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 2","termid":"PBO:0049807"}


id: GO:0052542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"defense response by callose deposition","synonyms":[{"name":"callose deposition during defense response","type":"related"},{"name":"callose localization during defense response","type":"related"}],"termid":"GO:0052542"}


id: FYPO:0006263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K36 trimethylation during vegetative growth","synonyms":[{"name":"increased histone H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K36 trimethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K36me3 during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K36 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006263"}


id: GO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dAMP, deoxyadenosine monophosphate, to produce dADP. Addition of two phosphate groups produces dATP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dAMP phosphorylation","termid":"GO:0061565"}


id: MONDO:0008219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus is a group of chronic autoimmune skin diseases characterized by blister formations on the outer layer of the skin and the mucous membranes. Three clinical forms have been characterized, of which pemphigus vulgaris is the most frequent (75%).","definition_xrefs":["Orphanet:704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pemphigus vulgaris","secondary_identifiers":["MESH:C536645","SCTID:49420001","MedDRA:10052802","UMLS:C0030809","icd11.foundation:278358681","DOID:0060851","EFO:0004719","MEDGEN:10621","NCIT:C34910","OMIM:169610","NANDO:1200229","GARD:7355","ICD10CM:L10.0"],"synonyms":[{"name":"familial pemphigus vulgaris","type":"exact"},{"name":"pemphigus vulgaris, familial","type":"related"}],"termid":"MONDO:0008219","xrefs":{"Monarch":{"xref_id":"0008219"}}}


id: MONDO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphedema (obsolete MONDO:0003229)","termid":"MONDO:0003229","xrefs":{"Monarch":{"xref_id":"0003229"}}}


id: PBO:0062782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 4","termid":"PBO:0062782"}


id: MONDO:1011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000494"],"termid":"MONDO:1011403","xrefs":{"Monarch":{"xref_id":"1011403"}}}


id: PBO:0028483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity","termid":"PBO:0028483"}


id: GO:0003841
data:
  {"annotated_genes":["SJAG_04041","SJAG_01957","SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72017,77194,90376],"is_not":false,"summary":null,"term":"GO:0003841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol-3-phosphate = CoA + 1,2-diacyl-sn-glycerol-3-phosphate.","definition_xrefs":["GOC:ab","EC:2.3.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"},{"relation_name":"is_a","term_name":"lysophosphatidic acid acyltransferase activity","termid":"GO:0042171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19709","Reactome:R-HSA-1482598","Reactome:R-HSA-1482689","Reactome:R-HSA-75885","MetaCyc:RXN-1623","Reactome:R-HSA-1482548","Reactome:R-HSA-1482894","GO:0004469","Reactome:R-HSA-1482636","Reactome:R-HSA-1482667","Reactome:R-HSA-8849345","Reactome:R-HSA-1482547","Reactome:R-HSA-1482539"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"1-acylglycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerolphosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerophosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase activity","type":"related"},{"name":"lysophosphatidate acyltransferase activity","type":"exact"},{"name":"lysophosphatidic acid-acyltransferase activity","type":"related"}],"termid":"GO:0003841","terms_by_termid":{"GO:0003841":null}}


id: PBO:0017663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family, Sea2 (predicted)","termid":"PBO:0017663"}


id: GO:0060628
data:
  {"annotated_genes":["SJAG_01166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76984],"is_not":false,"summary":null,"term":"GO:0060628"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of ER to Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0060628","terms_by_termid":{"GO:0060628":null}}


id: MONDO:0029148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 34","secondary_identifiers":["DOID:0111911","MEDGEN:1648297","OMIM:618153","GARD:18407","UMLS:C4748403"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 34","type":"related"},{"name":"SPGF34","type":"related"}],"termid":"MONDO:0029148","xrefs":{"Monarch":{"xref_id":"0029148"}}}


id: MONDO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the testis and is characterized by the presence of fusiform cells and collagenization.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular fibroma","secondary_identifiers":["UMLS:C1515282","NCIT:C39951","DOID:7675","MEDGEN:308256"],"termid":"MONDO:0004324","xrefs":{"Monarch":{"xref_id":"0004324"}}}


id: PBO:0086283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in 5'-end processing of mitochondrial RNAs; located in the mitochondrial membrane","termid":"PBO:0086283"}


id: MONDO:0008672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Watson syndrome is believed to be a variant of neurofibromatosis type 1. The symptoms of this condition are pulmonary valvular stenosis, cafe-au-lait spots and short stature. IQTest scores for individuals with Watson syndromecan rangebetween 60-100.Many people with this condition also have a larger than average head size (macrocephaly) and Lisch nodules. While mutations in the NF1 gene have been found in families with Watson syndrome, the exactcause of this condition is unknown. The conditionis inherited in an autosomal dominant pattern. Treatment aims at managing the specific symptoms of an individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis-Noonan syndrome","termid":"MONDO:0011035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Watson syndrome","secondary_identifiers":["OMIM:193520","SCTID:403820003","GARD:5540","MEDGEN:107817","DOID:0070483","ICD9:709.8","Orphanet:3444","UMLS:C0553586","icd11.foundation:1674178232"],"synonyms":[{"name":"WTSN","type":"related"},{"name":"Watson syndrome","type":"exact"},{"name":"cafe-Au-lait Spots with pulmonic stenosis","type":"related"},{"name":"pulmonic stenosis with cafe-Au-lait Spots","type":"related"}],"termid":"MONDO:0008672","xrefs":{"Monarch":{"xref_id":"0008672"}}}


id: MONDO:0016727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extraventricular neurocytoma (EVN), a variant of central neurocytoma, is a rare neuronal neoplasm, composed of round cells with neuronal differentiation, which is located outside of the ventricular system, usually within the spinal cord or cerebral hemispheres and that manifests with headache, nausea, vomiting, complex partial seizures or focal neurological deficits. In some cases it may exhibit atypical features consistent with aggressive clinical behavior.","definition_xrefs":["Orphanet:251927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extraventricular neurocytoma","secondary_identifiers":["DOID:0081314","MEDGEN:457401","GARD:20727","ICDO:9506/1","UMLS:C2985175","NCIT:C92555","ONCOTREE:EVN","SCTID:716787002"],"synonyms":[{"name":"EVN","type":"exact"},{"name":"extraventricular neurocytoma (WHO grade II)","type":"exact"}],"termid":"MONDO:0016727","xrefs":{"Monarch":{"xref_id":"0016727"}}}


id: PBO:0059713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 21","termid":"PBO:0059713"}


id: MONDO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete persistent generalized lymphadenopathy (obsolete MONDO:0000742)","secondary_identifiers":["SCTID:95892003","DOID:0060314"],"synonyms":[{"name":"PGL","type":"exact"}],"termid":"MONDO:0000742","xrefs":{"Monarch":{"xref_id":"0000742"}}}


id: PBO:0028622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2-type_prespliceosome_assembly","termid":"PBO:0028622"}


id: PBO:0076887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 38","termid":"PBO:0076887"}


id: MONDO:0012812
data:
  {"annotated_genes":["SJAG_01697"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86547],"is_not":false,"summary":null,"term":"MONDO:0012812"}]},"cv_name":"mondo","definition":"Early infantile epileptic encephalopathy 4 (EIEE4) is a form of early infantile epileptic encephalopathy, which refers to a group of neurological conditions characterized by severe seizures beginning in infancy. EIEE4, specifically, is often associated with partial complex or tonic-clonic seizures, although other seizure types have been reported. Other signs and symptoms mayinclude intellectual disability, reduced muscle tone (hypotonia), hypsarrhythmia (an irregular pattern seen on EEG), dyskinesia (involuntary movement of the body), and spastic di- or quadriplegia. EIEE4 is caused by changes (mutations) in the STXBP1 gene and is inherited in an autosomal dominant manner. Treatment is based on the signs and symptoms present in each person. For example, certain medications are often prescribed to help control seizures, although they are not always effective in all people with the condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Dravet syndrome","termid":"MONDO:0100135"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C162472","DOID:0080436","SCTID:768666006","UMLS:C2677326","MEDGEN:436917","Orphanet:599373","MESH:C567404","GARD:12900","OMIM:612164"],"synonyms":[{"name":"DEE4","type":"exact"},{"name":"EIEE4","type":"exact"},{"name":"STXBP1 early infantile epileptic encephalopathy","type":"exact"},{"name":"STXBP1-related early-onset encephalopathy","type":"related"},{"name":"STXBP1-related encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 4","type":"exact"},{"name":"developmental and epileptic encephalopathy, 4","type":"exact"},{"name":"early infantile epileptic encephalopathy 4","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in STXBP1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 4","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 4","type":"exact"}],"termid":"MONDO:0012812","terms_by_termid":{"MONDO:0012812":null},"xrefs":{"Monarch":{"xref_id":"0012812"}}}


id: MONDO:0010765
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"46,XY complete gonadal dysgenesis (46,XY CGD) is a disorder of sex development (DSD) associated with anomalies in gonadal development that result in the presence of female external and internal genitalia despite the 46,XY karyotype.","definition_xrefs":["Orphanet:242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","termid":"MONDO:0019520"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY complete gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2936694","DOID:14448","MESH:D006061","SCTID:95218005","NCIT:C120198","NORD:1750","GARD:5068","MEDGEN:445380","OMIMPS:400044"],"synonyms":[{"name":"46 XY gonadal dysgenesis","type":"exact"},{"name":"46, XY CGD","type":"exact"},{"name":"46, XY complete gonadal dysgenesis","type":"exact"},{"name":"46, XY pure gonadal dysgenesis","type":"exact"},{"name":"46,XY CGD","type":"exact"},{"name":"46,XY SEX reversal","type":"exact"},{"name":"46,XY gonadal dysgenesis","type":"exact"},{"name":"46,XY pure gonadal dysgenesis","type":"exact"},{"name":"Swyer syndrome","type":"exact"},{"name":"gonadal dysgenesis, XY female type","type":"related"},{"name":"pure gonadal dysgenesis 46,XY","type":"exact"},{"name":"sex-reversing locus on X","type":"related"},{"name":"sex-reversing locus on X, formerly","type":"related"},{"name":"testis-determining Factor, X-chromosomal","type":"related"}],"termid":"MONDO:0010765","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0010765"}}}


id: GO:0015650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: lactate (out) + H+ (out) = lactate (in) + H+ (in).","definition_xrefs":["TC:2.A.14.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transmembrane transporter activity","termid":"GO:0015129"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"lactate:proton symporter activity","synonyms":[{"name":"lactate permease","type":"broad"},{"name":"lactate:hydrogen porter activity","type":"exact"},{"name":"lactate:hydrogen symporter activity","type":"exact"},{"name":"lactate:proton porter activity","type":"exact"}],"termid":"GO:0015650"}


id: PBO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU family","termid":"PBO:0001870"}


id: GO:0008981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protease IV activity (obsolete GO:0008981)","synonyms":[{"name":"protease IV activity","type":"exact"}],"termid":"GO:0008981"}


id: FYPO:0005582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains monoacylglycerol phosphates (also called lysophospholipids) that have normal length fatty acid chain residues.","definition_xrefs":["PMID:27053105","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal monoacylglycerol phosphate chain length","synonyms":[{"name":"normal lysophospholipid chain length","type":"exact"},{"name":"normal lysophospholipid fatty acid chain length","type":"exact"},{"name":"normal monoacylglycerol phosphate chain length during mitotic cell cycle","type":"related"},{"name":"normal monoacylglycerol phosphate chain length during vegetative growth","type":"exact"},{"name":"normal monoacylglycerol phosphate fatty acid chain length","type":"exact"}],"termid":"FYPO:0005582"}


id: PR:Q09885
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.11c","synonyms":[{"name":"Spom972h-SPCC584.11c","type":"exact"}],"termid":"PR:Q09885"}


id: CHEBI:53090
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-dicyclohexylcarbodiimide","termid":"CHEBI:53090"}


id: MONDO:0013690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Pitt-Hopkins-like syndrome in which the cause of the disease is a mutation in the NRXN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Pitt-Hopkins-like syndrome","termid":"MONDO:0016377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pitt-Hopkins-like syndrome 2","secondary_identifiers":["MEDGEN:482109","UMLS:C3280479","DOID:0111332","OMIM:614325"],"synonyms":[{"name":"NRXN1 Pitt-Hopkins-like syndrome","type":"exact"},{"name":"PTHSL2","type":"related"},{"name":"Pitt-Hopkins-like syndrome 2","type":"exact"},{"name":"Pitt-Hopkins-like syndrome caused by mutation in NRXN1","type":"exact"},{"name":"Pitt-Hopkins-like syndrome type 2","type":"exact"}],"termid":"MONDO:0013690","xrefs":{"Monarch":{"xref_id":"0013690"}}}


id: GO:0061015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA, small nuclear ribonucleic acid into the nucleus.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into nucleus","termid":"GO:0006404"},{"relation_name":"is_a","term_name":"snRNA transport","termid":"GO:0051030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"snRNA import into nucleus","termid":"GO:0061015"}


id: PBO:0041330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 88","termid":"PBO:0041330"}


id: GO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a hemidesmosome.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of hemidesmosome (obsolete GO:0061465)","termid":"GO:0061465"}


id: PBO:0077893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein pseudogene 2","termid":"PBO:0077893"}


id: PBO:0077073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein","termid":"PBO:0077073"}


id: PBO:0058226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4516","termid":"PBO:0058226"}


id: GO:0016850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for lyases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other lyase activity (obsolete GO:0016850)","synonyms":[{"name":"other lyase activity","type":"exact"}],"termid":"GO:0016850"}


id: MONDO:0013571
data:
  {"annotated_genes":["SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86324],"is_not":false,"summary":null,"term":"MONDO:0013571"}]},"cv_name":"mondo","definition":"A congenital disorder resulting from a deficiency in erythrocyte catalase, an enzyme responsible for the breakdown of hydrogen peroxide.","definition_xrefs":["Orphanet:926"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation (obsolete MONDO:0017753)","termid":"MONDO:0017753"},{"relation_name":"is_a","term_name":"disorder of defective peroxisome oxidative status","termid":"MONDO:0100306"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"acatalasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:277.6","DOID:2582","MESH:D020642","SCTID:124202004","NANDO:1200774","NCIT:C84526","UMLS:C0268419","GARD:363","MEDGEN:75679","HGNC:1516","EFO:0004144","OMIM:614097"],"synonyms":[{"name":"acatalasemia","type":"exact"},{"name":"acatalasia","type":"exact"},{"name":"catalase deficiency","type":"exact"},{"name":"deficiency of catalase","type":"exact"}],"termid":"MONDO:0013571","terms_by_termid":{"MONDO:0013571":null},"xrefs":{"Monarch":{"xref_id":"0013571"}}}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: MONDO:0003454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the conjunctiva.","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"conjunctival cancer","secondary_identifiers":["SCTID:363463000","DOID:5467","ICD9:190.3","NCIT:C3564","UMLS:C0153628","MEDGEN:56316"],"synonyms":[{"name":"cancer of conjunctiva","type":"broad"},{"name":"conjunctiva cancer","type":"exact"},{"name":"conjunctival tumor","type":"broad"},{"name":"conjunctival tumour","type":"broad"},{"name":"malignant conjunctiva neoplasm","type":"exact"},{"name":"malignant conjunctiva tumor","type":"exact"},{"name":"malignant conjunctiva tumour","type":"exact"},{"name":"malignant conjunctival neoplasm","type":"exact"},{"name":"malignant conjunctival tumor","type":"exact"},{"name":"malignant conjunctival tumour","type":"exact"},{"name":"malignant neoplasm of conjunctiva","type":"exact"},{"name":"malignant neoplasm of conjunctiva (primary)","type":"exact"},{"name":"malignant neoplasm of the conjunctiva","type":"exact"},{"name":"malignant tumor of conjunctiva","type":"exact"},{"name":"malignant tumor of the conjunctiva","type":"exact"},{"name":"malignant tumour of conjunctiva","type":"exact"},{"name":"malignant tumour of the conjunctiva","type":"exact"}],"termid":"MONDO:0003454","xrefs":{"Monarch":{"xref_id":"0003454"}}}


id: MONDO:1012178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, dog","secondary_identifiers":["OMIA:000690-9615"],"termid":"MONDO:1012178","xrefs":{"Monarch":{"xref_id":"1012178"}}}


id: MOD:01582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01582"}


id: FYPO:0000377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is increased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased frequency of apoptosis","synonyms":[{"name":"apoptosis: increased","type":"related"},{"name":"increased apoptosis","type":"exact"},{"name":"increased apoptotic frequency","type":"exact"}],"termid":"FYPO:0000377"}


id: GO:0038083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own tyrosine amino acid residues, or a tyrosine residue on an identical protein.","definition_xrefs":["PMID:10037737","PMID:10068444","PMID:10940390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"RTK autophosphorylation","type":"narrow"},{"name":"receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"tyrosine autophosphorylation","type":"exact"}],"termid":"GO:0038083"}


id: FYPO:0005645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of Cutin-1 (N-carbamoyl-2-(triphenyl-lambda-5-phosphanylidene)acetamide) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to Cutin-1","synonyms":[{"name":"resistance to Cutin-1 during mitotic cell cycle","type":"related"},{"name":"resistance to Cutin-1 during vegetative growth","type":"exact"},{"name":"resistance to N-carbamoyl-2-(triphenyl-lambda-5-phosphanylidene)acetamide","type":"exact"},{"name":"resistant to Cutin-1","type":"exact"}],"termid":"FYPO:0005645"}


id: GO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription corepressor, a protein involved in negative regulation of transcription via protein-protein interactions with transcription factors and other proteins that negatively regulate transcription. Transcription corepressors do not bind DNA directly, but rather mediate protein-protein interactions between repressing transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator binding","termid":"GO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transcription corepressor binding","secondary_identifiers":["GO:0001226"],"synonyms":[{"name":"RNA polymerase II transcription corepressor binding","type":"related"}],"termid":"GO:0001222"}


id: PBO:0088595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor (GTPase) Mtg1","termid":"PBO:0088595"}


id: GO:0005364
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96102],"is_not":false,"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: maltose(out) + H+(out) = maltose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"maltose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen/maltose transporter activity","type":"broad"},{"name":"maltose permease","type":"broad"},{"name":"maltose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005364","terms_by_termid":{"GO:0005364":null}}


id: MONDO:0022687
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  {"annotated_genes":["SJAG_02084","SJAG_02196","SJAG_01945","SJAG_00526","SJAG_01438","SJAG_01400","SJAG_02457","SJAG_03692","SJAG_02242","SJAG_00863","SJAG_00380","SJAG_01356","SJAG_03862","SJAG_05332","SJAG_05212","SJAG_02119","SJAG_02377","SJAG_03923","SJAG_01179","SJAG_04233","SJAG_02885","SJAG_04533","SJAG_00933","SJAG_03393","SJAG_01286","SJAG_03720","SJAG_00059","SJAG_00087","SJAG_02680","SJAG_04641","SJAG_01168","SJAG_04822","SJAG_00686","SJAG_04622","SJAG_00421","SJAG_01317","SJAG_00645","SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[85785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[85760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[87149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[86662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[87382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[85521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[86810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[85376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[86524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[87138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[87457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[86350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[86038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[85602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[86116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[85555,85554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[85540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[86000,86001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[86195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[86645,86644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[87508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[85779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[85850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[86918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[86680,86681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[86687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[85958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86968,86969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[85973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[86104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"Degeneration of the cerebellum. It may be an inherited condition, a paraneoplastic syndrome, or secondary to autoimmune disorders.","definition_xrefs":["NCIT:C84624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00087":null,"SJAG_00380":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00645":null,"SJAG_00686":null,"SJAG_00863":null,"SJAG_00933":null,"SJAG_01168":null,"SJAG_01179":null,"SJAG_01286":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01400":null,"SJAG_01438":null,"SJAG_01945":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02242":null,"SJAG_02377":null,"SJAG_02457":null,"SJAG_02680":null,"SJAG_02885":null,"SJAG_03393":null,"SJAG_03692":null,"SJAG_03720":null,"SJAG_03862":null,"SJAG_03923":null,"SJAG_04233":null,"SJAG_04418":null,"SJAG_04533":null,"SJAG_04622":null,"SJAG_04641":null,"SJAG_04822":null,"SJAG_05212":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebellar degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0262404","SCTID:95646004","MEDGEN:75496","SCTID:418143002","ICD9:331.9","DOID:1443"],"synonyms":[{"name":"Brain degeneration","type":"exact"},{"name":"cerebellar Degeneration","type":"exact"},{"name":"cerebellar degeneration","type":"exact"},{"name":"cerebellum neurodegenerative disease","type":"exact"},{"name":"cerebral degeneration","type":"related"},{"name":"neurodegenerative disease of cerebellum","type":"exact"}],"termid":"MONDO:0022687","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008458":null,"MONDO:0008840":null,"MONDO:0008943":null,"MONDO:0010524":null,"MONDO:0010547":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011402":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0011801":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0012784":null,"MONDO:0013392":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014104":null,"MONDO:0014417":null,"MONDO:0014503":null,"MONDO:0014557":null,"MONDO:0014601":null,"MONDO:0014744":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0018996":null,"MONDO:0030312":null,"MONDO:0030318":null,"MONDO:0030323":null,"MONDO:0032923":null,"MONDO:0033115":null,"MONDO:0033482":null,"MONDO:0044720":null,"MONDO:0100340":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0022687"}}}


id: PBO:0041670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 3","termid":"PBO:0041670"}


id: GO:1904680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a peptide from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"peptide transmembrane transporter activity","secondary_identifiers":["GO:0015637","GO:0015197","Reactome:R-HSA-1500817"],"synonyms":[{"name":"peptide transporter activity","type":"related"},{"name":"peptide uptake permease activity","type":"related"}],"termid":"GO:1904680"}


id: MONDO:0021488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland neoplasm","termid":"MONDO:0021222"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of lacrimal gland","secondary_identifiers":["UMLS:C0154024","MEDGEN:57813","NCIT:C3621","icd11.foundation:1163790602","ICD9:224.2","SCTID:92169007"],"synonyms":[{"name":"benign lacrimal gland neoplasm","type":"exact"},{"name":"benign lacrimal gland tumor","type":"exact"},{"name":"benign lacrimal gland tumour","type":"exact"},{"name":"benign neoplasm of the lacrimal gland","type":"exact"},{"name":"benign tumor of lacrimal gland","type":"exact"},{"name":"benign tumor of the lacrimal gland","type":"exact"},{"name":"benign tumour of lacrimal gland","type":"exact"},{"name":"benign tumour of the lacrimal gland","type":"exact"},{"name":"lacrimal gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021488","xrefs":{"Monarch":{"xref_id":"0021488"}}}


id: GO:0051291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers that are not all identical. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein heterooligomerization","synonyms":[{"name":"protein heterooligomer assembly","type":"exact"},{"name":"protein heterooligomer biosynthesis","type":"exact"},{"name":"protein heterooligomer biosynthetic process","type":"exact"},{"name":"protein heterooligomer formation","type":"exact"}],"termid":"GO:0051291"}


id: GO:0047780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citrate = cis-aconitate + H2O.","definition_xrefs":["EC:4.2.1.3"],"gene_count":0,"genotype_count":0,"name":"obsolete citrate dehydratase activity (obsolete GO:0047780)","synonyms":[{"name":"aconitate hydratase activity","type":"broad"},{"name":"citrate hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate hydro-lyase (cis-aconitate-forming) activity","type":"exact"},{"name":"citrate hydro-lyase activity","type":"broad"}],"termid":"GO:0047780"}


id: PBO:0003736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd3","termid":"PBO:0003736"}


id: PBO:0028011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_horsetail-astral_microtubule_array","termid":"PBO:0028011"}


id: PR:P0CT58
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.04c","synonyms":[{"name":"Spom972h-rps2201","type":"exact"}],"termid":"PR:P0CT58"}


id: SO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A secondary structure variant that compensate for the change made by a previous variant.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_secondary_structure_variant","termid":"SO:0001596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory_transcript_secondary_structure_variant","synonyms":[{"name":"compensatory transcript secondary structure variant","type":"exact"}],"termid":"SO:0001597"}


id: MONDO:0013856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism and other facial dysmorphism, brachydactyly, genital abnormalities, intellectual disability, and recurrent inflammatory episodes","secondary_identifiers":["UMLS:C3553465","MEDGEN:766379","OMIM:614684"],"synonyms":[{"name":"hypertelorism and other facial dysmorphism, brachydactyly, genital abnormalities, intellectual disability, and recurrent inflammatory episodes","type":"exact"},{"name":"hypertelorism and other facial dysmorphism, brachydactyly, genital abnormalities, mental retardation, and recurrent inflammatory episodes","type":"exact"}],"termid":"MONDO:0013856","xrefs":{"Monarch":{"xref_id":"0013856"}}}


id: GO:0051568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:pr","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 methylation (obsolete GO:0051568)","synonyms":[{"name":"histone H3 K4 methylation","type":"exact"},{"name":"histone H3K4me","type":"exact"},{"name":"histone lysine H3 K4 methylation","type":"exact"}],"termid":"GO:0051568"}


id: GO:1900618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system morphogenesis","synonyms":[{"name":"regulation of shoot morphogenesis","type":"exact"}],"termid":"GO:1900618"}


id: PR:C6Y4A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.17 gene.","definition_xrefs":["UniProtKB:C6Y4A9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23D3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.17","synonyms":[{"name":"Spom972h-SPAC23D3.17","type":"exact"}],"termid":"PR:C6Y4A9"}


id: MONDO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amelogenesis imperfecta (AI) represents a group of developmental conditions affecting the structure and clinical appearance of the enamel of all or nearly all the teeth in a more or less equal manner, and which may be associated with morphologic or biochemical changes elsewhere in the body.","definition_xrefs":["Orphanet:88661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dental enamel hypoplasia","termid":"MONDO:0004038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta","secondary_identifiers":["UMLS:C0002452","CSP:0828-0533","DOID:2187","icd11.foundation:1923123066","MEDGEN:240","GARD:5791","OMIMPS:104500","SCTID:78494001","MESH:D000567","ICD9:520.5","NORD:765"],"termid":"MONDO:0019507","xrefs":{"Monarch":{"xref_id":"0019507"}}}


id: PBO:0070701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 5","termid":"PBO:0070701"}


id: FYPO:0006115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins, during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:28640807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein oxidation during vegetative growth","termid":"FYPO:0000219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased protein oxidation during mitotic S phase","synonyms":[{"name":"accumulation of carbonylated proteins during S phase during vegetative growth","type":"related"},{"name":"increased level of disulfides during mitotic S phase","type":"related"},{"name":"increased level of oxidised thiols in proteins during mitotic S phase","type":"related"},{"name":"increased level of oxidized protein thiols during mitotic S phase","type":"related"},{"name":"increased protein oxidation during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006115"}


id: MONDO:0009789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonarteritic anterior ischemic optic neuropathy, susceptibility to","secondary_identifiers":["MEDGEN:338294","UMLS:C1847711","OMIM:258660"],"synonyms":[{"name":"Naion, susceptibility to","type":"related"},{"name":"nonarteritic anterior ischemic optic neuropathy, susceptibility to","type":"exact"},{"name":"optic neuropathy, anterior ischemic, susceptibility to","type":"related"},{"name":"susceptibility to nonarteritic anterior ischaemic optic neuropathy","type":"related"},{"name":"susceptibility to nonarteritic anterior ischemic optic neuropathy","type":"related"}],"termid":"MONDO:0009789","xrefs":{"Monarch":{"xref_id":"0009789"}}}


id: FYPO:0004412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase is the stage of mitosis in which chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GO:1902967","GO:0000090","PomBase:mah","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone","termid":"FYPO:0003484"},{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase","synonyms":[{"name":"abolished protein localization to spindle midzone during anaphase during mitotic cell cycle","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004412"}


id: PBO:0027154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glycine_level","termid":"PBO:0027154"}


id: PBO:0039345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aly/REF export factor","termid":"PBO:0039345"}


id: PR:Q10290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal2 gene.","definition_xrefs":["UniProtKB:Q10290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein mal2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.14","synonyms":[{"name":"Spom972h-mal2","type":"exact"},{"name":"sim4 complex subunit mal2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10290"}


id: PBO:0053543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 548","termid":"PBO:0053543"}


id: PBO:0069035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 280, pseudogene","termid":"PBO:0069035"}


id: GO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-4,5-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1126"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 4,5-dioxygenase activity (obsolete GO:0034808)","termid":"GO:0034808"}


id: PBO:0079644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q family like 1","termid":"PBO:0079644"}


id: PBO:0090052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto2","termid":"PBO:0090052"}


id: MONDO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the conjunctiva in a newborn due to Chlamydia trachomatis which was acquired during labor and delivery.","definition_xrefs":["NCIT:C116817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"},{"relation_name":"is_a","term_name":"bacterial conjunctivitis","termid":"MONDO:0006668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"inclusion conjunctivitis","secondary_identifiers":["SCTID:231861005","ICD9:077.98","DOID:13800","ICD10CM:A74.0","EFO:0007324","MEDGEN:1095","MESH:D003235","ICD9:077.0","UMLS:C0009770"],"synonyms":[{"name":"Chlamydial conjunctivitis","type":"exact"},{"name":"Paratrachoma","type":"related"},{"name":"Trachoma","type":"exact"},{"name":"adult inclusion conjunctivitis","type":"exact"},{"name":"inclusion blennorrhoea","type":"exact"},{"name":"inclusion blenorrhea","type":"exact"},{"name":"neonatal Chlamydia conjunctivitis","type":"exact"}],"termid":"MONDO:0005808","xrefs":{"Monarch":{"xref_id":"0005808"}}}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: PBO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP helicase Irc3 (predicted)","termid":"PBO:0009350"}


id: PBO:0030480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_aspartate_level","termid":"PBO:0030480"}


id: MONDO:0017309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal Marfan syndrome is a rare, severe and life-threatening genetic disease, occurring during the neonatal period, characterized by classical Marfan syndrome manifestations in addition to facial dysmorphism (megalocornea, iridodonesis, ectopia lentis, crumpled ears, loose redundant skin giving a 'senile' facial appearance), flexion joint contractures, pulmonary emphysema, and a severe, rapidly progressive cardiovascular disease (including ascending aortic dilatation and severe mitral and/or tricuspid valve insufficiency). Additionally, skeletal manifestations (arachnodactyly, dolichostenomelia, pectus deformities) are also associated.","definition_xrefs":["Orphanet:284979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"Marfan syndrome","termid":"MONDO:0007947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neonatal Marfan syndrome","secondary_identifiers":["MEDGEN:864491","UMLS:C4016054","icd11.foundation:1102890898","SCTID:763839005","GARD:21128"],"synonyms":[{"name":"neonatal MFS","type":"exact"}],"termid":"MONDO:0017309","xrefs":{"Monarch":{"xref_id":"0017309"}}}


id: PBO:0060837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 pseudogene 1","termid":"PBO:0060837"}


id: PR:O14306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9G1.10c gene.","definition_xrefs":["UniProtKB:O14306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate 5-phosphatase C9G1.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.10c","synonyms":[{"name":"Spom972h-SPAC9G1.10c","type":"exact"}],"termid":"PR:O14306"}


id: PBO:0090773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomembrane system protein, FAR-17a/AIG1-like family protein, human AIG1 and ADTRP ortholog","termid":"PBO:0090773"}


id: GO:0015058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor-like module containing hormone receptor activity (obsolete GO:0015058)","synonyms":[{"name":"EGF-like module containing hormone receptor activity","type":"exact"},{"name":"Egr1 hormone receptor","type":"exact"},{"name":"epidermal growth factor-like module containing hormone receptor activity","type":"exact"}],"termid":"GO:0015058"}


id: PBO:0055091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2509","termid":"PBO:0055091"}


id: GO:1904377
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["PMID:18216290","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"positively_regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localization to cell periphery","type":"narrow"},{"name":"up regulation of protein localization to cell periphery","type":"exact"},{"name":"up-regulation of protein localization to cell periphery","type":"exact"},{"name":"upregulation of protein localization to cell periphery","type":"exact"}],"termid":"GO:1904377","terms_by_termid":{"GO:0120047":null}}


id: PBO:0074790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 11","termid":"PBO:0074790"}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: GO:0007493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an endoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"endodermal cell fate commitment","termid":"GO:0001711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate determination","synonyms":[{"name":"endoderm cell fate determination","type":"exact"}],"termid":"GO:0007493"}


id: PBO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-depends_on","termid":"PBO:0017476"}


id: GO:0009584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of visible light","synonyms":[{"name":"perception of visible light","type":"related"}],"termid":"GO:0009584"}


id: GO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD) from the nicotinamide riboside (NR).","definition_xrefs":["PMID:17482543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process via the salvage pathway","termid":"GO:0034355"},{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"NAD biosynthesis via nicotinamide riboside salvage pathway","secondary_identifiers":["Reactome:R-HSA-197264","MetaCyc:PWY3O-4106"],"synonyms":[{"name":"NR salvage pathway","type":"exact"},{"name":"nicotinamide riboside salvage pathway","type":"exact"}],"termid":"GO:0034356"}


id: PBO:0041671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase","termid":"PBO:0041671"}


id: PBO:0074880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59B","termid":"PBO:0074880"}


id: PBO:0110869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class II), SHREC complex Clr3","termid":"PBO:0110869"}


id: PR:P87295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.03c gene.","definition_xrefs":["UniProtKB:P87295","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pep5-like zinc finger protein C16A10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.03c","synonyms":[{"name":"Spom972h-SPAC16A10.03c","type":"exact"}],"termid":"PR:P87295"}


id: GO:0009743
data:
  {"annotated_genes":["SJAG_00472","SJAG_04026","SJAG_03081","SJAG_01254","SJAG_02444","SJAG_01699","SJAG_00574","SJAG_04312","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94564,107164,109830,102167,115833,106814,116861,109325,106228],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbohydrate","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to carbohydrate stimulus","type":"exact"}],"termid":"GO:0009743","terms_by_termid":{"GO:0010619":null}}


id: PBO:0014244
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Overexpressed in BFA Resistant strains","termid":"PBO:0014244"}


id: MONDO:0022642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoid tumor that occurs during childhood.","definition_xrefs":["NCIT:C118810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood carcinoid tumor","secondary_identifiers":["GARD:9315","MEDGEN:859267","UMLS:C3899673"],"synonyms":[{"name":"carcinoid tumor (disease) of childhood","type":"exact"},{"name":"carcinoid tumor childhood","type":"related"},{"name":"carcinoid tumour (disease) of childhood","type":"exact"},{"name":"carcinoid tumour childhood","type":"related"},{"name":"childhood carcinoid tumor","type":"exact"},{"name":"childhood carcinoid tumor (disease)","type":"exact"},{"name":"childhood carcinoid tumour (disease)","type":"exact"},{"name":"paediatric carcinoid tumour (disease)","type":"exact"},{"name":"pediatric carcinoid tumor (disease)","type":"exact"}],"termid":"MONDO:0022642","xrefs":{"Monarch":{"xref_id":"0022642"}}}


id: PBO:0040960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 31","termid":"PBO:0040960"}


id: GO:1900063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peroxisome organization.","definition_xrefs":["GOC:TermGenie","PMID:7500953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007031"],"is_obsolete":false,"name":"regulation of peroxisome organization","synonyms":[{"name":"regulation of peroxisome organisation","type":"exact"},{"name":"regulation of peroxisome organization and biogenesis","type":"related"},{"name":"regulation of peroxisome-assembly ATPase activity","type":"related"}],"termid":"GO:1900063"}


id: MONDO:0009088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, neural, with atypical atopic dermatitis","secondary_identifiers":["MEDGEN:346567","UMLS:C1857334","OMIM:221700","MESH:C565639"],"synonyms":[{"name":"deafness, neural, with atypical atopic dermatitis","type":"exact"}],"termid":"MONDO:0009088","xrefs":{"Monarch":{"xref_id":"0009088"}}}


id: GO:0035162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stages of blood cell formation that take place within the embryo.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hemopoiesis","synonyms":[{"name":"embryonic haematopoiesis","type":"exact"},{"name":"embryonic haemopoiesis","type":"exact"},{"name":"embryonic hematopoiesis","type":"exact"}],"termid":"GO:0035162"}


id: GO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway resulting in the formation of ergothioneine from N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (also known as hercynine or histidine betaine).","definition_xrefs":["KEGG_REACTION:R04878"],"gene_count":0,"genotype_count":0,"name":"obsolete ergothioneine biosynthesis from N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (obsolete GO:0052711)","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism to ergothioneine","type":"exact"},{"name":"ergothioneine biosynthesis from hercynine","type":"exact"},{"name":"ergothioneine biosynthesis from histidine betaine","type":"exact"},{"name":"hercynine catabolism to ergothioneine","type":"exact"},{"name":"histidine betaine catabolism to ergothioneine","type":"exact"}],"termid":"GO:0052711"}


id: PBO:0051812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRAG1 antisense RNA 1","termid":"PBO:0051812"}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["GOC:dph","PMID:24463506","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: MONDO:0018018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005267"],"is_obsolete":false,"name":"wild type ATTR amyloidosis","secondary_identifiers":["DOID:0080937","Orphanet:330001","SCTID:237877004","UMLS:C0342623","ICD9:277.39","GARD:21501","MEDGEN:87446","NANDO:1200212"],"synonyms":[{"name":"ATTRwt amyloidosis","type":"exact"},{"name":"ATTRwt-related amyloidosis","type":"exact"},{"name":"SSA","type":"exact"},{"name":"Senile systemic amyloidosis","type":"exact"},{"name":"wild type ATTR-related amyloidosis","type":"exact"}],"termid":"MONDO:0018018","xrefs":{"Monarch":{"xref_id":"0018018"}}}


id: FYPO:0001427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in a single round of rereplication of the entire genome, which takes place more slowly than normal replication.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in slow rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in slow rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in slow rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in slow re-replication","type":"exact"},{"name":"slow mitotic DNA re-replication","type":"related"},{"name":"slow mitotic DNA rereplication","type":"related"}],"termid":"FYPO:0001427"}


id: PBO:0032716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-free_translesion_synthesis","termid":"PBO:0032716"}


id: PBO:0069297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 553, pseudogene","termid":"PBO:0069297"}


id: PBO:0090786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein Cfh1","termid":"PBO:0090786"}


id: PBO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EED pseudogene 1","termid":"PBO:0045808"}


id: FYPO:0004044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated tetranucleate vegetative cell","synonyms":[{"name":"elongated tetranucleate cells during vegetative growth","type":"exact"},{"name":"elongated tetranucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"long tetranucleate vegetative cell","type":"exact"}],"termid":"FYPO:0004044"}


id: PBO:0072106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 4","termid":"PBO:0072106"}


id: PBO:0045990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 4","termid":"PBO:0045990"}


id: PBO:0072446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 10","termid":"PBO:0072446"}


id: GO:0110135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of the cysteine knot protein Norrin to a Frizzled 4 (Fzd4) family receptor on the surface of the target cell and ending with a change in cell state.","definition_xrefs":["PMID:17955262","PMID:15035989","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Norrin signaling pathway","termid":"GO:0110135"}


id: PR:O74856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- caf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) ribonuclease pop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.06c","synonyms":[{"name":"CCR4-associated factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-caf1","type":"exact"}],"termid":"PR:O74856"}


id: PBO:0011472
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of PNPG to glucose is 20.3(mM min-1 ml-2)","termid":"PBO:0011472"}


id: PBO:0036413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036413"}


id: PBO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 8","termid":"PBO:0043447"}


id: MONDO:0012836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 12","secondary_identifiers":["OMIM:612254","MEDGEN:436858","UMLS:C2677095"],"synonyms":[{"name":"SLEB12","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 12","type":"exact"}],"termid":"MONDO:0012836","xrefs":{"Monarch":{"xref_id":"0012836"}}}


id: FYPO:0004747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cortical patches at one or both cell tips than normal during early mitosis (before anaphase).","definition_xrefs":["PomBase:mah","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"actin cortical patches present in increased numbers at cell tip during early mitosis","synonyms":[{"name":"F-actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"accumulation of actin cortical patches at cell tip during early mitosis","type":"related"},{"name":"actin cortical patches in increased numbers at cell tip during early mitosis during vegetative growth","type":"exact"},{"name":"actin cortical patches present in greater numbers at cell tip during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell end during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during cell growth during early mitotic nuclear division","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during early mitosis during mitotic cell cycle","type":"related"},{"name":"actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"additional actin cortical patches present at cell tip during early mitosis","type":"exact"},{"name":"extra actin cortical patches at cell tip during early mitosis","type":"exact"},{"name":"increased number of actin patches at cell tip in early mitosis","type":"exact"}],"termid":"FYPO:0004747"}


id: MONDO:0800297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronal ceroid lipofuscinosis, late infantile (obsolete MONDO:0800297)","termid":"MONDO:0800297","xrefs":{"Monarch":{"xref_id":"0800297"}}}


id: PBO:0047316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1","termid":"PBO:0047316"}


id: PBO:0072397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 2","termid":"PBO:0072397"}


id: PBO:0109118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 18, RPL3 N3(tau)-histidine","termid":"PBO:0109118"}


id: PBO:0073115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 3","termid":"PBO:0073115"}


id: PBO:0116737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem cell derived angiogenic lncRNA","termid":"PBO:0116737"}


id: PBO:0027848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_vegetative_cell","termid":"PBO:0027848"}


id: PR:O43040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and termination factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.11c","synonyms":[{"name":"Spom972h-ctf1","type":"exact"},{"name":"transcription termination factor ctf1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43040"}


id: PBO:0089446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase","termid":"PBO:0089446"}


id: PBO:0079909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1","termid":"PBO:0079909"}


id: PBO:0029050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029050"}


id: FYPO:0003586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing is abnormal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["GO:0031297","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abnormal replication fork processing","synonyms":[{"name":"abnormal HR-mediated fork restart","type":"related"},{"name":"abnormal collapsed replication fork processing","type":"exact"},{"name":"abnormal recovery from replication fork arrest","type":"exact"},{"name":"abnormal recovery from replication fork stalling","type":"exact"},{"name":"abnormal replication fork processing during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork processing during vegetative growth","type":"exact"},{"name":"abnormal replication fork restart","type":"related"},{"name":"abnormal replication restart","type":"related"}],"termid":"FYPO:0003586"}


id: GO:0090384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a phagosome membrane to a lysosome membrane. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0140056","GO:0008150","GO:0044085","GO:0006810"],"is_obsolete":false,"name":"phagosome-lysosome docking","synonyms":[{"name":"lysosome recruitment to phagosome","type":"exact"}],"termid":"GO:0090384"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: GO:0009309
data:
  {"annotated_genes":["SJAG_03167","SJAG_02505","SJAG_05007","SJAG_04481","SJAG_01455","SJAG_00043","SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73646,74592,77557,79588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[76180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[78162,75196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[78161,103072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03632":null,"SJAG_04481":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amine anabolism","type":"exact"},{"name":"amine biosynthesis","type":"exact"},{"name":"amine formation","type":"exact"},{"name":"amine synthesis","type":"exact"}],"termid":"GO:0009309","terms_by_termid":{"GO:0000162":null,"GO:0006597":null,"GO:0008295":null,"GO:0033387":null}}


id: PBO:0059338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S9","termid":"PBO:0059338"}


id: PBO:0089358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone p-factor receptor Mam2","termid":"PBO:0089358"}


id: PBO:0028603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_hypoxanthine_nitrogen_source","termid":"PBO:0028603"}


id: PBO:0068502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 89, pseudogene","termid":"PBO:0068502"}


id: PBO:0052658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 26","termid":"PBO:0052658"}


id: PBO:0003332
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CocKayNe syndrome 1","termid":"PBO:0003332"}


id: PBO:0055461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2894","termid":"PBO:0055461"}


id: MONDO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome, associating familial adult medullary cystic disease with spastic quadriparesis has been described in two cases so far. Renal transplantation was successful in those two patients.","definition_xrefs":["Orphanet:2666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"adult familial nephronophthisis-spastic quadriparesia syndrome","secondary_identifiers":["GARD:18777","MEDGEN:1385988","UMLS:C4518090"],"termid":"MONDO:0017044","xrefs":{"Monarch":{"xref_id":"0017044"}}}


id: MONDO:0018193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular teratoma","secondary_identifiers":["NCIT:C3877","EFO:1000573","HP:0100616","GARD:17560","UMLS:C0238451","Orphanet:363483","MEDGEN:68669"],"synonyms":[{"name":"teratoma of testis","type":"exact"},{"name":"teratoma of the testis","type":"exact"},{"name":"testicular teratoma","type":"exact"},{"name":"testicular teratoma (disease)","type":"exact"}],"termid":"MONDO:0018193","xrefs":{"Monarch":{"xref_id":"0018193"}}}


id: PBO:0111939
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZNF_U1","termid":"PBO:0111939"}


id: MONDO:0021081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune acute encephalitis caused by antibodies against the glutamate NMDA receptor. It usually affects females and in the majority of cases it is associated with the presence of a tumor, most commonly an ovarian teratoma. The presence of a tumor in patients with this form of encephalitis implies that the latter is a paraneoplastic syndrome. It is manifested with psychiatric symptoms and epileptic seizures. It is a potentially lethal disorder; however, it is usually reversible with the prompt removal of the tumor.","definition_xrefs":["NCIT:C94853"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"paraneoplastic limbic encephalitis","termid":"MONDO:0015589"},{"relation_name":"excluded_subClassOf","term_name":"steroid-responsive encephalopathy associated with autoimmune thyroiditis","termid":"MONDO:0019385"},{"relation_name":"excluded_subClassOf","term_name":"antibody mediated epilepsy","termid":"MONDO:0100029"},{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-NMDA receptor encephalitis","secondary_identifiers":["MEDGEN:458943","SCTID:716684004","UMLS:C2986717","GARD:20513","NANDO:2201317","MESH:D060426","icd11.foundation:1568915618","Orphanet:217253"],"synonyms":[{"name":"anti-NMDA receptor encephalitis","type":"exact"},{"name":"limbic encephalitis with N-methyl-D-aspartate receptor antibodies","type":"exact"},{"name":"limbic encephalitis with NMDA receptor antibodies","type":"exact"}],"termid":"MONDO:0021081","xrefs":{"Monarch":{"xref_id":"0021081"}}}


id: MOD:01003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butyloxymethyl (Bum)","termid":"MOD:01003"}


id: PATO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"characterised by an unidentifiable pattern.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random pattern","termid":"PATO:0002401"}


id: PBO:0081291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 74","termid":"PBO:0081291"}


id: GO:0150102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte activation.","definition_xrefs":["GOC:aruk","PMID:15597323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"negatively_regulates","term_name":"monocyte activation","termid":"GO:0042117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte activation","synonyms":[{"name":"repression of monocyte activation","type":"exact"}],"termid":"GO:0150102"}


id: GO:0106198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of an inorganic anion linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to a decarboxylation reaction (obsolete GO:0106198)","termid":"GO:0106198"}


id: GO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with bradykinin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"bradykinin receptor activity","termid":"GO:0004947"}


id: PBO:0060064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 11","termid":"PBO:0060064"}


id: PBO:0088415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex, cyclin-dependent protein kinase subunit Srb10","termid":"PBO:0088415"}


id: MONDO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation or irritation of a synovial bursa, the fibrous sac that acts as a cushion between moving structures of bones, muscles, tendons or skin.","definition_xrefs":["MESH:D002062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"synovial bursa disorder","termid":"MONDO:0056802"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bursitis","secondary_identifiers":["DOID:2965","MEDGEN:691","SCTID:84017003","UMLS:C0006444","icd11.foundation:1984620329","NCIT:C94407","ICD9:727.3"],"synonyms":[{"name":"Bursitides","type":"related"},{"name":"Capsulitides","type":"related"},{"name":"Capsulitides, adhesive","type":"related"},{"name":"Capsulitides, shoulder adhesive","type":"related"},{"name":"adhesive Capsulitides","type":"related"},{"name":"adhesive Capsulitides, shoulder","type":"related"},{"name":"adhesive capsulitis","type":"related"},{"name":"adhesive capsulitis of the shoulder","type":"related"},{"name":"adhesive capsulitis, shoulder","type":"related"},{"name":"capsulitis","type":"related"},{"name":"capsulitis, adhesive","type":"related"},{"name":"capsulitis, shoulder adhesive","type":"related"},{"name":"frozen shoulder","type":"related"},{"name":"frozen shoulders","type":"related"},{"name":"inflammation of synovial bursa","type":"exact"},{"name":"shoulder adhesive Capsulitides","type":"related"},{"name":"shoulder adhesive capsulitis","type":"related"},{"name":"shoulder, frozen","type":"related"},{"name":"shoulders, frozen","type":"related"},{"name":"synovial bursa inflammation","type":"exact"}],"termid":"MONDO:0002471","xrefs":{"Monarch":{"xref_id":"0002471"}}}


id: PBO:0062644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily N member 1 pseudogene","termid":"PBO:0062644"}


id: PBO:0012582
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell Wall Lysis","termid":"PBO:0012582"}


id: MONDO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:C6528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericytic neoplasm","secondary_identifiers":["UMLS:C1335392","DOID:3316","MEDGEN:235473"],"synonyms":[{"name":"Pericytic neoplasm","type":"exact"},{"name":"Pericytic tumor","type":"exact"},{"name":"Pericytic tumour","type":"exact"},{"name":"malignant perivascular cancer","type":"narrow"},{"name":"perivascular neoplasm","type":"exact"},{"name":"perivascular tumor","type":"exact"},{"name":"perivascular tumour","type":"exact"}],"termid":"MONDO:0002604","xrefs":{"Monarch":{"xref_id":"0002604"}}}


id: GO:0047253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-B-glucosaminyl-1,2)-beta-D-mannosyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-D-glucosaminyl-1,2-beta)-(N-acetyl-D-glucosaminyl-1,4-beta)-D-mannosyl-R + UDP.","definition_xrefs":["EC:2.4.1.201","MetaCyc:2.4.1.201-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:19945"],"synonyms":[{"name":"N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:2,6-bis(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyl-transferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI activity","type":"related"}],"termid":"GO:0047253"}


id: PATO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distensible","termid":"PATO:0002468"}


id: MONDO:0013138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertigo, benign recurrent, 2","secondary_identifiers":["MEDGEN:442695","OMIM:613106","UMLS:C2751289","MESH:C567749"],"synonyms":[{"name":"BRV2","type":"exact"},{"name":"vertigo, benign recurrent, 2","type":"exact"}],"termid":"MONDO:0013138","xrefs":{"Monarch":{"xref_id":"0013138"}}}


id: MONDO:0009446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis-intellectual disability-dwarfism-renal impairment syndrome is characterized by nonbullous congenital ichthyosis, intellectual deficit, dwarfism and renal impairment. It has been described in four members of one Iranian family. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis-intellectual disability-dwarfism-renal impairment syndrome","secondary_identifiers":["MESH:C536274","UMLS:C1855787","OMIM:242530","GARD:4641","MEDGEN:340966"],"synonyms":[{"name":"Passwell-Goodman-Siprkowski syndrome","type":"exact"},{"name":"ichthyosis intellectual deficit dwarfism renal impairment","type":"related"},{"name":"ichthyosis, intellectual disability, dwarfism and renal impairment","type":"related"},{"name":"ichthyosis, intellectual disability, dwarfism, and renal impairment","type":"related"},{"name":"ichthyosis, mental retardation, dwarfism and renal impairment","type":"related"},{"name":"ichthyosis, mental retardation, dwarfism, and renal impairment","type":"related"}],"termid":"MONDO:0009446","xrefs":{"Monarch":{"xref_id":"0009446"}}}


id: GO:0075508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where a viral capsid enters the host nuclear pore complex (NPC) but remains attached to the pore on the nuclear side. The capsid then disassembles, releasing the viral genome into the nucleoplasm.","definition_xrefs":["VZ:989","PMID:22929056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of viral genome into host nucleus via retainment of capsid in nuclear pore complex and release of genome into nucleoplasm","synonyms":[{"name":"entry of viral genome into host nucleus via attachment of capsid to nuclear pore complex and release of genome into nucleoplasm","type":"exact"}],"termid":"GO:0075508"}


id: MONDO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scapula, contour of vertebral border of (obsolete MONDO:0008405)","secondary_identifiers":["OMIM:181300"],"synonyms":[{"name":"scapula, contour of vertebral border of","type":"exact"}],"termid":"MONDO:0008405","xrefs":{"Monarch":{"xref_id":"0008405"}}}


id: MONDO:0016662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autoinflammatory syndrome defined as recurrence of pericardial inflammation of unknown origin following the first episode of acute pericarditis and a symptom-free interval of 4-6 weeks or longer. Recurrent attacks of chest pain may be the sole presentation or the chest pain may be accompanied by pericardial friction rub, electrocardiographic or echocardiographic changes, pericardial effusion and increased C-reactive protein. Cardiac tamponade is a rare, life-threatening complication.","definition_xrefs":["Orphanet:251307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic recurrent pericarditis","secondary_identifiers":["SCTID:766704005","ICD10CM:I09.2","UMLS:C4707790","MEDGEN:1642945","GARD:20695"],"synonyms":[{"name":"idiopathic relapsing pericarditis","type":"exact"}],"termid":"MONDO:0016662","xrefs":{"Monarch":{"xref_id":"0016662"}}}


id: PBO:0027952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_pyridoxine_level","termid":"PBO:0027952"}


id: PBO:0062518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 4 pseudogene","termid":"PBO:0062518"}


id: FYPO:0007358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to heavy water (D2O). Cells stop growing (and may die) at a concentration of heavy water that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to heavy water","synonyms":[{"name":"hypersensitive to heavy water","type":"exact"},{"name":"sensitive to D2O","type":"exact"},{"name":"sensitive to dideuterium oxide","type":"exact"},{"name":"sensitive to heavy water during mitotic cell cycle","type":"related"},{"name":"sensitive to heavy water during vegetative growth","type":"exact"}],"termid":"FYPO:0007358"}


id: PATO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000560 height value (obsolete PATO:0000560)","termid":"PATO:0000560"}


id: PBO:0073894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A9 antisense RNA 1","termid":"PBO:0073894"}


id: PBO:0081438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 287","termid":"PBO:0081438"}


id: PBO:0028913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0028913"}


id: PBO:0052252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 21","termid":"PBO:0052252"}


id: MONDO:0008515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare congenital distal limb malformation characterized by complete bilateral syndactyly (involving all digits 1 to 5).","definition_xrefs":["Orphanet:93405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 4","secondary_identifiers":["SCTID:719158007","UMLS:C1861355","MESH:C566092","MEDGEN:350013","DOID:0111818","GARD:4434","icd11.foundation:75755208","OMIM:186200"],"synonyms":[{"name":"Haas type syndactyly","type":"related"},{"name":"LMBR1 non-syndromic syndactyly","type":"exact"},{"name":"SDTY4","type":"related"},{"name":"Sd4","type":"related"},{"name":"non-syndromic syndactyly caused by mutation in LMBR1","type":"exact"},{"name":"polysyndactyly type Haas","type":"related"},{"name":"polysyndactyly, Haas type","type":"exact"},{"name":"syndactyly, type 4","type":"related"},{"name":"syndactyly, type IV","type":"related"}],"termid":"MONDO:0008515","xrefs":{"Monarch":{"xref_id":"0008515"}}}


id: PBO:0003099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Hub1","termid":"PBO:0003099"}


id: PBO:0067925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 227","termid":"PBO:0067925"}


id: MONDO:1010809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, chicken","secondary_identifiers":["OMIA:000810-9031"],"termid":"MONDO:1010809","xrefs":{"Monarch":{"xref_id":"1010809"}}}


id: GO:0070669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-2","synonyms":[{"name":"response to IL-2","type":"exact"}],"termid":"GO:0070669"}


id: GO:0106163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay.","definition_xrefs":["PMID:30601114","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0106163)","termid":"GO:0106163"}


id: GO:0120281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that surrounds an autolysosome, a single-membrane-bounded vesicle in which endogenous cellular material is degraded.","definition_xrefs":["PMID:32047650","GOC:krc","PMID:24657946","GOC:nhn","PMID:17182262","PMID:26382870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"part_of","term_name":"autolysosome","termid":"GO:0044754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"autolysosome membrane","termid":"GO:0120281"}


id: MONDO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare malignant tumor of soft tissue characterized by a bimorphic pattern composed of undifferentiated small round cells and islands of well differentiated hyaline cartilage.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete extraskeletal mesenchymal chondrosarcoma (obsolete MONDO:0003043)","secondary_identifiers":["DOID:4548","ICD9:171.9","NCIT:C27481","SCTID:404080006"],"synonyms":[{"name":"mesenchymal extraosseous chondrosarcoma","type":"exact"},{"name":"mesenchymal extraskeletal chondrosarcoma","type":"exact"}],"termid":"MONDO:0003043","xrefs":{"Monarch":{"xref_id":"0003043"}}}


id: GO:0052163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont modulates the frequency, rate or extent of the production of nitric oxide as part of the innate immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont defense to host-produced nitric oxide (obsolete GO:0052163)","synonyms":[{"name":"defense response to host innate immune response nitric oxide production","type":"narrow"},{"name":"evasion or tolerance by organism of host NO","type":"exact"},{"name":"evasion or tolerance by organism of host nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of host-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of host-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of nitric oxide produced by other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance by symbiont of host-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by host in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by host in response to organism","type":"exact"},{"name":"modulation by organism of defense-related host NO production","type":"exact"},{"name":"modulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"response to defense-related host nitric oxide production","type":"related"},{"name":"response to defense-related nitric oxide production by other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052163"}


id: PBO:0070329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 1","termid":"PBO:0070329"}


id: FYPO:0004180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein present as aggregates of misfolded protein is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24936793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"increased protein aggregate level","termid":"FYPO:0008358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular protein aggregate level","synonyms":[{"name":"increased cellular protein aggregate level during mitotic cell cycle","type":"related"},{"name":"increased cellular protein aggregate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004180"}


id: MONDO:0007662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any iridogoniodysgenesis in which the cause of the disease is a mutation in the PITX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rieger anomaly","termid":"MONDO:0019628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 4","secondary_identifiers":["DOID:0080609","GARD:3026","OMIM:137600","MEDGEN:330750","UMLS:C1842031"],"synonyms":[{"name":"ASGD4","type":"related"},{"name":"IRID2","type":"exact"},{"name":"PITX2 iridogoniodysgenesis","type":"exact"},{"name":"anterior segment dysgenesis 4","type":"exact"},{"name":"iridogoniodysgenesis caused by mutation in PITX2","type":"exact"},{"name":"iridogoniodysgenesis syndrome","type":"broad"},{"name":"iridogoniodysgenesis type 2","type":"related"},{"name":"iridogoniodysgenesis, type 2","type":"exact"},{"name":"iris hypoplasia with early-onset glaucoma, autosomal dominant","type":"related"}],"termid":"MONDO:0007662","xrefs":{"Monarch":{"xref_id":"0007662"}}}


id: PBO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biological_process","termid":"PBO:0034492"}


id: PBO:0063777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 4","termid":"PBO:0063777"}


id: GO:1901205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901205)","synonyms":[{"name":"down regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"downregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"inhibition of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901205"}


id: PBO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_nitrogen_starvation","termid":"PBO:0030707"}


id: PBO:0067480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 614, pseudogene","termid":"PBO:0067480"}


id: GO:0033325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate phosphoryl-ethanolamine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via phosphoryl-ethanolamine","synonyms":[{"name":"choline anabolism via phosphoryl-ethanolamine","type":"exact"},{"name":"choline biosynthesis via phosphoryl-ethanolamine","type":"exact"},{"name":"choline formation via phosphoryl-ethanolamine","type":"exact"},{"name":"choline synthesis via phosphoryl-ethanolamine","type":"exact"}],"termid":"GO:0033325"}


id: MONDO:0007204
data:
  {"annotated_genes":["SJAG_00288"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87057],"is_not":false,"summary":null,"term":"MONDO:0007204"}]},"cv_name":"mondo","definition":"Any Cole-Carpenter syndrome in which the cause of the disease is a mutation in the P4HB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cole-Carpenter syndrome","termid":"MONDO:0016085"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cole-Carpenter syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1374755","OMIM:112240","UMLS:C4317154"],"synonyms":[{"name":"CLCRP1","type":"related"},{"name":"COLE-CARPENTER syndrome 1","type":"related"},{"name":"Cole-Carpenter syndrome 1","type":"exact"},{"name":"Cole-Carpenter syndrome caused by mutation in P4HB","type":"exact"},{"name":"Cole-Carpenter syndrome type 1","type":"exact"},{"name":"P4HB Cole-Carpenter syndrome","type":"exact"},{"name":"bone fragility with craniosynostosis, ocular proptosis, hydrocephalus, and distinctive Facial features","type":"related"}],"termid":"MONDO:0007204","terms_by_termid":{"MONDO:0007204":null},"xrefs":{"Monarch":{"xref_id":"0007204"}}}


id: PBO:0017500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family mitochondrial protein (predicted)","termid":"PBO:0017500"}


id: PBO:0015247
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(5)","termid":"PBO:0015247"}


id: PBO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein Ugo1 (predicted)","termid":"PBO:0001743"}


id: GO:0060049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein glycosylation. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:pr","GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"regulation of protein glycosylation","synonyms":[{"name":"regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060049"}


id: PBO:0039890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP44 and MYOCD antisense RNA 1","termid":"PBO:0039890"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: MONDO:0013731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"MEGF10-related myopathy","secondary_identifiers":["MEDGEN:482309","GARD:12199","OMIM:614399","Orphanet:439212","UMLS:C3280679","DOID:0111333"],"synonyms":[{"name":"A congenital myopathy caused by mutations in the multiple epidermal growth factor-like domains 10 (MEGF10) gene, which causes early-onset myopathy characterised by severe weakness, scoliosis, joint contractures, areflexia, respiratory distress, and dysphagia, and a milder phenotype of minicore myopathy.","type":"exact"},{"name":"A congenital myopathy caused by mutations in the multiple epidermal growth factor-like domains 10 (MEGF10) gene, which causes early-onset myopathy characterized by severe weakness, scoliosis, joint contractures, areflexia, respiratory distress, and dysphagia, and a milder phenotype of minicore myopathy.","type":"exact"},{"name":"EMARDD","type":"related"},{"name":"MEGF10 myopathy","type":"exact"},{"name":"MEGF10-related myopathy","type":"exact"},{"name":"congenital myopathy 10A, severe variant","type":"exact"},{"name":"early-onset myopathy, areflexia, respiratory distress and dysphagia","type":"related"},{"name":"early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome","type":"related"},{"name":"myopathy, areflexia, respiratory distress, and dysphagia, early-onset","type":"related"},{"name":"myopathy, areflexia, respiratory distress, and dysphagia, early-onset, mild variant","type":"related"}],"termid":"MONDO:0013731","xrefs":{"Monarch":{"xref_id":"0013731"}}}


id: GO:0039682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of unidirectional viral DNA replication that takes place on a circular DNA to rapidly produce numerous copies of the viral genome. Involves creating a nick in one strand of the circular DNA molecule at the origin of replication. DNA is then synthesized by DNA polymerase. Using the non-nicked strand as a template, replication proceeds around the circular DNA molecule, displacing the nicked strand as single-stranded DNA.","definition_xrefs":["GOC:jl","Wikipedia:Rolling_circle_replication","GOC:bf","VZ:915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA strand displacement replication","termid":"GO:0039687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"rolling circle viral DNA replication","termid":"GO:0039682"}


id: GO:0052158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defenses","termid":"GO:0030682"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","secondary_identifiers":["GO:0052297"],"synonyms":[{"name":"modulation by organism of defense response in host by specific elicitors","type":"exact"},{"name":"modulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"modulation by organism of pathogen-race/host plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"modulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052158"}


id: PBO:0053447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 395","termid":"PBO:0053447"}


id: PBO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 2","termid":"PBO:0050146"}


id: PBO:0042870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 100","termid":"PBO:0042870"}


id: PBO:0030743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylinositol-4-phosphate_level","termid":"PBO:0030743"}


id: PBO:0036200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_bundles_present_in_decreased_numbers_during_mitotic_interphase","termid":"PBO:0036200"}


id: GO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of secondary lysosome in which a primary lysosome has fused with the outer membrane of an autophagosome or amphisome. It is involved in the second step of autophagy in which it degrades contents with acidic lysosomal hydrolases.","definition_xrefs":["GOC:sart","PMID:24657946","NIF_Subcellular:sao8444068431","PMID:19008921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary lysosome","termid":"GO:0005767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"autolysosome","synonyms":[{"name":"AVd","type":"exact"},{"name":"degrading autophagic vacuole","type":"exact"}],"termid":"GO:0044754"}


id: GO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:ai","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endopeptidase activity","synonyms":[{"name":"protease regulator activity","type":"narrow"}],"termid":"GO:0052548"}


id: MONDO:0009915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX disorder of sex development-skeletal anomalies syndrome","secondary_identifiers":["OMIM:264270","UMLS:C1849696","MEDGEN:341514","MESH:C564869","GARD:16617","Orphanet:2975"],"synonyms":[{"name":"female pseudohermaphroditism-skeletal anomalies syndrome","type":"exact"},{"name":"pseudohermaphroditism, female, with skeletal anomalies","type":"related"}],"termid":"MONDO:0009915","xrefs":{"Monarch":{"xref_id":"0009915"}}}


id: PBO:0057396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-4","termid":"PBO:0057396"}


id: GO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"discadenine metabolic process","synonyms":[{"name":"discadenine metabolism","type":"exact"}],"termid":"GO:0034267"}


id: PR:Q09850
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eng2 gene.","definition_xrefs":["UniProtKB:Q09850","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3(4)-beta-glucanase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.10c","synonyms":[{"name":"Spom972h-eng2","type":"exact"},{"name":"endo-1,3-beta-glucanase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"endo-1,4-beta-glucanase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"laminarinase-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09850"}


id: GO:0046521
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90172,109134],"is_not":false,"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingoid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid breakdown","type":"exact"},{"name":"sphingoid catabolism","type":"exact"},{"name":"sphingoid degradation","type":"exact"}],"termid":"GO:0046521","terms_by_termid":{"GO:0046521":null}}


id: GO:0106001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of hexoses, notably D-glucose, fructose, and galactose, into the blood by absorption from the small intestine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal hexose absorption","secondary_identifiers":["Reactome:R-HSA-8981373"],"termid":"GO:0106001"}


id: PR:Q1MTN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pic1 gene.","definition_xrefs":["UniProtKB:Q1MTN3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein-related protein pic1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.15","synonyms":[{"name":"INCENP-related protein pic1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pic1","type":"exact"}],"termid":"PR:Q1MTN3"}


id: PBO:0017014
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orc4 binds to the T-rich strand of replication origins throughout the cell cycle","termid":"PBO:0017014"}


id: FYPO:0004530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitochondrial translation","synonyms":[{"name":"abolished mitochondrial protein biosynthesis","type":"exact"},{"name":"abolished mitochondrial protein synthesis","type":"exact"},{"name":"abolished mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial translation during vegetative growth","type":"exact"},{"name":"mitochondrial translation abolished","type":"exact"}],"termid":"FYPO:0004530"}


id: GO:0036128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sperm-specific voltage-gated calcium channel that controls the intracellular calcium ion concentration and, thereby, the swimming behavior of sperm. Consists of a heteromeric tetramer surrounding a calcium ion- selective pore. May also contain additional auxiliary subunits.","definition_xrefs":["PMID:22354039","GOC:sp","PMID:21224844","PMID:17478420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel complex","termid":"GO:0005891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"CatSper complex","synonyms":[{"name":"CATSPER channel","type":"exact"},{"name":"CatSper channel complex","type":"exact"}],"termid":"GO:0036128"}


id: MONDO:1011541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, cattle","secondary_identifiers":["OMIA:001993-9913"],"termid":"MONDO:1011541","xrefs":{"Monarch":{"xref_id":"1011541"}}}


id: PBO:0066563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 2","termid":"PBO:0066563"}


id: PBO:0091665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0091665"}


id: MONDO:0009560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculotrichoanal syndrome","secondary_identifiers":["MESH:C536022","SCTID:703539006","UMLS:C1855425","OMIM:248450","ICD9:759.89","MEDGEN:383680","GARD:3395","Orphanet:2717"],"synonyms":[{"name":"MANITOBA oculotrichoanal syndrome","type":"related"},{"name":"MOTA","type":"related"},{"name":"MOTA syndrome","type":"exact"},{"name":"Manitoba Trichoanal syndrome","type":"related"},{"name":"Manitoba oculotrichoanal syndrome","type":"exact"},{"name":"Marles syndrome","type":"exact"},{"name":"Marles-Greenberg-Persaud syndrome","type":"exact"},{"name":"unilateral upper eyelid coloboma, aberrant anterior hairline pattern, and anal anomalies","type":"related"}],"termid":"MONDO:0009560","xrefs":{"Monarch":{"xref_id":"0009560"}}}


id: GO:0048867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a stem cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["CL:0000034","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"stem cell fate commitment","termid":"GO:0048865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell fate determination","termid":"GO:0048867"}


id: MONDO:0004907
data:
  {"annotated_genes":["SJAG_03469","SJAG_02536","SJAG_03126","SJAG_00155","SJAG_01202"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[86796,86795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"},{"annotations":[85869,85868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Hair loss usually from the scalp. It may result in bald spots or spread to the entire scalp or the entire epidermis. It may be androgenetic or caused by chemotherapeutic agents, compulsive hair pulling, autoimmune disorders or congenital conditions.","definition_xrefs":["NCIT:C50575"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_01202":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"alopecia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:56317004","ICD9:704.0","DOID:987","MEDGEN:7982","ICD9:704.00","MESH:D000505","Orphanet:79364","icd11.foundation:1313926062","ICD9:704.09","UMLS:C0002170"],"synonyms":[{"name":"alopecia","type":"exact"},{"name":"alopecia areata","type":"narrow"},{"name":"hair loss","type":"exact"},{"name":"loss Of hair","type":"exact"}],"termid":"MONDO:0004907","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0004907"}}}


id: GO:0032457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of membrane-bounded vesicles from peripheral endocytic compartments back to the plasma membrane where they are recycled for further rounds of transport.","definition_xrefs":["PMID:16473635","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"fast endocytic recycling","synonyms":[{"name":"direct endocytic recycling","type":"exact"}],"termid":"GO:0032457"}


id: PBO:0084756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix protein; required for assembly or stability at high temperature of the F1 sector of mitochondrial F1F0 ATP synthase; null mutant temperature sensitive growth on glycerol is suppressed by multicopy expression of Odc1p","termid":"PBO:0084756"}


id: GO:0097546
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Area of the cilium (also called flagellum) where the basal body and the axoneme are anchored to the plasma membrane. The ciliary base encompasses the distal part of the basal body, transition fibers and transition zone and is structurally and functionally very distinct from the rest of the cilium. In this area proteins are sorted and filtered before entering the cilium, and many ciliary proteins localize specifically to this area.","definition_xrefs":["GOC:cilia","GOC:krc","PMID:22653444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary base","synonyms":[{"name":"cilial base","type":"exact"},{"name":"cilium base","type":"exact"},{"name":"flagellar base","type":"exact"},{"name":"flagellum base","type":"exact"}],"termid":"GO:0097546"}


id: PBO:0068169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 476","termid":"PBO:0068169"}


id: PBO:0070168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 82 pseudogene","termid":"PBO:0070168"}


id: PBO:0077527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 241","termid":"PBO:0077527"}


id: GO:0051517
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91064],"is_not":false,"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of unidimensional cell growth","termid":"GO:0051511"},{"relation_name":"is_a","term_name":"regulation of bipolar cell growth","termid":"GO:0051516"},{"relation_name":"negatively_regulates","term_name":"bipolar cell growth","termid":"GO:0042815"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of bipolar cell growth","type":"exact"},{"name":"down-regulation of bipolar cell growth","type":"exact"},{"name":"downregulation of bipolar cell growth","type":"exact"},{"name":"inhibition of bipolar cell growth","type":"narrow"}],"termid":"GO:0051517","terms_by_termid":{"GO:0051517":null}}


id: PBO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 2","termid":"PBO:0070381"}


id: PATO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of violet hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"violet","termid":"PATO:0001424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light violet","termid":"PATO:0001704"}


id: MONDO:0013513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNJ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 9","secondary_identifiers":["MEDGEN:462781","GARD:15737","UMLS:C3151431","OMIM:613980"],"synonyms":[{"name":"ATFB9","type":"related"},{"name":"KCNJ2 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 9","type":"exact"},{"name":"atrial fibrillation, familial, type 9","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNJ2","type":"exact"}],"termid":"MONDO:0013513","xrefs":{"Monarch":{"xref_id":"0013513"}}}


id: GO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of adiponectin, a protein hormone, by adipose tissue.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"adiponectin secretion","termid":"GO:0070162"}


id: PBO:0070222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 155 pseudogene","termid":"PBO:0070222"}


id: MOD:00656
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrocarbyl hydrogen with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"C-methylated residue","synonyms":[{"name":"CMeRes","type":"exact"}],"termid":"MOD:00656"}


id: PBO:0017563
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonprogressive congenital ataxia","termid":"PBO:0017563"}


id: GO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the potential difference across the mitochondrial membrane is reduced from its steady state level.","definition_xrefs":["Wikipedia:Mitochondrion","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial depolarization","synonyms":[{"name":"mitochondria depolarization","type":"exact"},{"name":"mitochondrial depolarisation","type":"exact"},{"name":"mitochondrial membrane depolarization","type":"exact"},{"name":"mitochondrion depolarization","type":"exact"}],"termid":"GO:0051882"}


id: PR:Q9HDV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP19A11.07c gene.","definition_xrefs":["UniProtKB:Q9HDV3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P19A11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.07c","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBP19A11.07c","type":"exact"}],"termid":"PR:Q9HDV3"}


id: PBO:0062545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily K member 1 pseudogene","termid":"PBO:0062545"}


id: PBO:0049771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 9","termid":"PBO:0049771"}


id: RO:HOM0000055
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that is characterized by duplication of adjacent sequences on a chromosome segment.","definition_xrefs":["ISBN:978-0878932665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_tandem_paralogy_relationship_with","synonyms":[{"name":"iterative paralogy","type":"related"},{"name":"serial paralogy","type":"related"},{"name":"tandem paralogous to","type":"exact"}],"termid":"RO:HOM0000055"}


id: FYPO:0000752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of selenate ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to selenate","synonyms":[{"name":"resistance to selenate during mitotic cell cycle","type":"related"},{"name":"resistance to selenate during vegetative growth","type":"exact"},{"name":"resistance to selenate ions","type":"exact"},{"name":"resistant to selenate","type":"exact"}],"termid":"FYPO:0000752"}


id: PBO:0059184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1","termid":"PBO:0059184"}


id: PBO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homeosis_relationship_with","termid":"PBO:0034356"}


id: PBO:0068492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 76, pseudogene","termid":"PBO:0068492"}


id: PBO:0005521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp54","termid":"PBO:0005521"}


id: PBO:0080929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 7","termid":"PBO:0080929"}


id: GO:1902957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial electron transport, NADH to ubiquinone.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:23530063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial electron transport, NADH to ubiquinone","termid":"GO:1902956"},{"relation_name":"is_a","term_name":"negative regulation of mitochondrial ATP synthesis coupled electron transport","termid":"GO:1905447"},{"relation_name":"negatively_regulates","term_name":"mitochondrial electron transport, NADH to ubiquinone","termid":"GO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"down regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"down regulation of mitochondrial electron transport, NADH to ubiquinone","type":"exact"},{"name":"down regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"},{"name":"down-regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"down-regulation of mitochondrial electron transport, NADH to ubiquinone","type":"exact"},{"name":"down-regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"},{"name":"downregulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"downregulation of mitochondrial electron transport, NADH to ubiquinone","type":"exact"},{"name":"downregulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"},{"name":"inhibition of complex I (NADH to ubiquinone)","type":"related"},{"name":"inhibition of mitochondrial electron transport, NADH to ubiquinone","type":"narrow"},{"name":"inhibition of oxidative phosphorylation, NADH to ubiquinone","type":"narrow"},{"name":"negative regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"negative regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:1902957"}


id: GO:0009380
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein complexes formed by the UvrABC excinuclease system, which carries out nucleotide excision repair. Three different complexes are formed by the 3 proteins as they proceed through the excision repair process. First a complex consisting of two A subunits and two B subunits bind DNA and unwind it around the damaged site. Then, the A subunits disassociate leaving behind a stable complex between B subunits and DNA. Now, subunit C binds to this B+DNA complex and causes subunit B to nick the DNA on one side of the complex while subunit C nicks the DNA on the other side of the complex. DNA polymerase I and DNA ligase can then repair the resulting gap.","definition_xrefs":["GOC:mah","PMID:12145219","PMID:15192705","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"excinuclease repair complex","synonyms":[{"name":"UvrABC excinuclease complex","type":"exact"},{"name":"excinuclease ABC complex","type":"exact"}],"termid":"GO:0009380"}


id: PBO:0004356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase (predicted)","termid":"PBO:0004356"}


id: GO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar part (obsolete GO:0044452)","synonyms":[{"name":"nucleolus component","type":"exact"}],"termid":"GO:0044452"}


id: PBO:0030881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_vegetative_growth","termid":"PBO:0030881"}


id: PBO:0041108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 1","termid":"PBO:0041108"}


