# terms

id: PBO:0041028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPNT2 pseudogene 1","termid":"PBO:0041028"}


id: MONDO:0010452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the DLG3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 90","secondary_identifiers":["MEDGEN:477074","UMLS:C3275443","OMIM:300850","GARD:22690","DOID:0112041"],"synonyms":[{"name":"DLG3 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX90","type":"related"},{"name":"intellectual developmental disorder, X-linked 90, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 90","type":"exact"},{"name":"intellectual disability, X-linked type 90","type":"exact"},{"name":"mental retardation, X-linked 90","type":"related"},{"name":"mental retardation, X-linked type 90","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in DLG3","type":"exact"}],"termid":"MONDO:0010452","xrefs":{"Monarch":{"xref_id":"0010452"}}}


id: PBO:0087490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cytochrome C oxidase complex; stabilizes or regulates formation of respiratory chain supercomplexes composed of Complex III (ubiquinol-cytochrome c reductase) and Complex IV (cytochrome c oxidase)","termid":"PBO:0087490"}


id: PBO:0065679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 1 homolog","termid":"PBO:0065679"}


id: FYECO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which NAD+ was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NAD+","termid":"FYECO:0000074"}


id: SO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome with origin in a leucoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"leucoplast_sequence","termid":"SO:0000747"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_chromosome","synonyms":[{"name":"leucoplast chromosome","type":"exact"}],"termid":"SO:0000823"}


id: PBO:0029415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_meiosis","termid":"PBO:0029415"}


id: PBO:0053811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1070","termid":"PBO:0053811"}


id: PBO:0089332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP chaperone complex subunit Cns1","termid":"PBO:0089332"}


id: GO:0031313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of an endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of endosome membrane","synonyms":[{"name":"extrinsic to endosome membrane","type":"narrow"}],"termid":"GO:0031313"}


id: MONDO:0009814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kaler-Garrity-Stern syndrome is a rare syndrome, described in two sisters of Mennonite descent, characterized by sparse hair, osteopenia, intellectual disability, minor facial abnormalities, joint laxity and hypotonia. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:2324"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopenia-intellectual disability-sparse hair syndrome","secondary_identifiers":["SCTID:732954002","GARD:354","UMLS:C1850140","MEDGEN:337979","OMIM:259690","MESH:C537706"],"synonyms":[{"name":"Kaler Garrity Stern syndrome","type":"related"},{"name":"Kaler-Garrity-Stern syndrome","type":"exact"},{"name":"osteopenia and sparse hair","type":"related"},{"name":"osteopenia intellectual disability sparse hair","type":"related"},{"name":"osteopenia mental retardation sparse hair","type":"related"}],"termid":"MONDO:0009814","xrefs":{"Monarch":{"xref_id":"0009814"}}}


id: GO:0061711
data:
  {"annotated_genes":["SJAG_00865","SJAG_04182"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58894,63957],"is_not":false,"summary":null,"term":"GO:0061711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonylcarbamoyladenylate + adenine(37) in tRNA = AMP + N(6)-L-threonylcarbamoyladenine(37) in tRNA.","definition_xrefs":["EC:2.3.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"N(6)-L-threonylcarbamoyladenine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-6784494","MetaCyc:RXN-14570","RHEA:37059"],"termid":"GO:0061711","terms_by_termid":{"GO:0061711":null}}


id: GO:1900956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900956"}


id: MONDO:0033259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 72","secondary_identifiers":["DOID:0080268","GARD:18148","MEDGEN:1614203","OMIM:617606","UMLS:C4539886"],"synonyms":[{"name":"DFNA72","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 72","type":"narrow"},{"name":"deafness, autosomal dominant 72","type":"narrow"}],"termid":"MONDO:0033259","xrefs":{"Monarch":{"xref_id":"0033259"}}}


id: PBO:0076916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 delta","termid":"PBO:0076916"}


id: MONDO:0859207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and gross motor and speech delay","secondary_identifiers":["MEDGEN:1794241","OMIM:619639","UMLS:C5562031"],"termid":"MONDO:0859207","xrefs":{"Monarch":{"xref_id":"0859207"}}}


id: MOD:00039
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline","definition_xrefs":["PubMed:3734192","ChEBI:18095","PubMed:11292863","PubMed:2400108","RESID:AA0030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-proline","synonyms":[{"name":"(2S,4R)-4-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-hydroxy-L-proline","type":"exact"},{"name":"4-hydroxylated L-proline","type":"exact"},{"name":"4-hydroxyproline","type":"exact"},{"name":"4-trans-hydroxy-L-proline","type":"exact"},{"name":"4HyPro","type":"exact"},{"name":"L-threo-4-hydroxyproline","type":"exact"},{"name":"MOD_RES 4-hydroxyproline","type":"exact"},{"name":"gamma-hydroxypyrrolidine-alpha-carboxylic acid","type":"exact"}],"termid":"MOD:00039"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: PBO:0056169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADCAM1 antisense RNA 1","termid":"PBO:0056169"}


id: PBO:0053522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 517","termid":"PBO:0053522"}


id: PBO:0080417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 1","termid":"PBO:0080417"}


id: GO:0018078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The iodination of peptidyl-thyronine, formed from tyrosine.","definition_xrefs":["RESID:AA0177","RESID:AA0178"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-thyronine iodination (obsolete GO:0018078)","termid":"GO:0018078"}


id: FYPO:0006894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased inositol hexakisphosphate kinase activity","termid":"FYPO:0006894"}


id: FYPO:0001766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA methylation, the posttranscriptional addition of methyl groups to specific residues in a tRNA molecule, is abnormal.","definition_xrefs":["GO:0030488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal tRNA methylation","synonyms":[{"name":"abnormal tRNA methylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001766"}


id: GO:0042362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin biosynthetic process","termid":"GO:0009110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fat-soluble vitamin biosynthetic process","synonyms":[{"name":"fat-soluble vitamin anabolism","type":"exact"},{"name":"fat-soluble vitamin biosynthesis","type":"exact"},{"name":"fat-soluble vitamin formation","type":"exact"},{"name":"fat-soluble vitamin synthesis","type":"exact"}],"termid":"GO:0042362"}


id: PBO:0044416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily T member 3, pseudogene","termid":"PBO:0044416"}


id: GO:0160105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(22) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(22) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0140101","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA (adenine(22)-N1)-methyltransferase activity","secondary_identifiers":["RHEA:43144"],"synonyms":[{"name":"tRNA (adenine(22)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(22)-N(1))-methyltransferase activity","type":"exact"}],"termid":"GO:0160105"}


id: MONDO:0100426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of a diseae which results from diagnostic and therapeutic procedures undertaken on a patient.","definition_xrefs":["PMID:27407693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic or non-iatrogenic","termid":"MONDO:0100369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic","secondary_identifiers":["icd11.foundation:4953745"],"termid":"MONDO:0100426","xrefs":{"Monarch":{"xref_id":"0100426"}}}


id: GO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-D-glucoside + UDP-L-rhamnose = flavonol 3-O-L-rhamnosylglucoside + UDP.","definition_xrefs":["EC:2.4.1.159","MetaCyc:2.4.1.159-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside L-rhamnosyltransferase activity","secondary_identifiers":["RHEA:22528"],"synonyms":[{"name":"UDP-L-rhamnose:flavonol-3-O-D-glucoside 6''-O-L-rhamnosyltransferase activity","type":"related"},{"name":"UDP-rhamnose:flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"},{"name":"uridine diphosphorhamnose-flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"}],"termid":"GO:0047230"}


id: GO:0045544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 2-oxoglutarate + gibberellin A12 (GA12) + H+ + 3 O2 = 3 CO2 + gibberellin A9 (GA9) + 2 H2O + 2 succinate. This reaction results in the oxidation of C-20 gibberellins to form the corresponding C-19 lactones, via a three-step oxidation at C-20 of the GA skeleton. Also converts GA53 to GA20. GA25 is also formed as a minor product.","definition_xrefs":["PMID:7604047","PMID:32652020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gibberellin 20-oxidase activity","termid":"GO:0045544"}


id: PBO:0082227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, ubiquitin ligase adaptor for Rsp5p; regulates starvation- and substrate-induced Ub-dependent endocytosis of select plasma membrane localized amino acid transporters; substrate of Rsp5p-mediated Lys63-polyubiquitination and Ubp2-mediated deubiquitination; promoter contains several Gcn4p binding sites required for induction in response to starvation via Gcn4p and the general amino acid control pathway; ECM21 has a paralog, CSR2, that arose from the whole genome duplication","termid":"PBO:0082227"}


id: GO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of an imaginal disc-derived wing.","definition_xrefs":["PMID:21393605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}


id: GO:0018566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxynaphthalene-6-sulfonate + O2 = H+ + (Z)-4-(2-hydroxy-5-sulfonatophenyl)-2-oxo-3-butenoate.","definition_xrefs":["UM-BBD_reactionID:r0324"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxynaphthalene-6-sulfonate 1,8a-dioxygenase activity (obsolete GO:0018566)","synonyms":[{"name":"1,2-dihydroxynaphthalene-6-sulphonate 1,8a-dioxygenase activity","type":"exact"}],"termid":"GO:0018566"}


id: PBO:0075708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2B","termid":"PBO:0075708"}


id: PBO:0073928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 1","termid":"PBO:0073928"}


id: PR:Q02953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q02953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E12.02","synonyms":[{"name":"HSF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HSTF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hsf1","type":"exact"},{"name":"heat shock transcription factor (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q02953"}


id: PR:O43042
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.14c","synonyms":[{"name":"Spom972h-mrpl3","type":"exact"}],"termid":"PR:O43042"}


id: PBO:0058095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4311","termid":"PBO:0058095"}


id: PR:O13920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm28 gene.","definition_xrefs":["UniProtKB:O13920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LETM1 domain-containing protein mdm28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.17","synonyms":[{"name":"Spom972h-mdm28","type":"exact"}],"termid":"PR:O13920"}


id: GO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-cysteine to form peptidyl-S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine phosphorylation (obsolete GO:0018218)","termid":"GO:0018218"}


id: GO:0060919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxins from outside of a cell into a cell.","definition_xrefs":["PMID:22773749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"auxin import into cell","synonyms":[{"name":"auxin influx","type":"broad"}],"termid":"GO:0060919"}


id: PBO:0083983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine-fructose-6-phosphate amidotransferase; catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis; GFA1 has a paralogous region, comprising ORFs YMR084W-YMR085W, that arose from the whole genome duplication","termid":"PBO:0083983"}


id: MONDO:0021228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the brainstem.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brainstem neoplasm","secondary_identifiers":["MEDGEN:146207","NCIT:C4869","Orphanet:36414","EFO:1001767","UMLS:C0677866"],"synonyms":[{"name":"Brain stem neoplasm","type":"exact"},{"name":"brain stem tumor","type":"exact"},{"name":"brain stem tumour","type":"exact"},{"name":"brainstem neoplasm (disease)","type":"exact"},{"name":"brainstem tumor","type":"exact"},{"name":"brainstem tumour","type":"exact"},{"name":"neoplasm of brain stem","type":"exact"},{"name":"neoplasm of brainstem","type":"exact"},{"name":"neoplasm of the brain stem","type":"exact"},{"name":"neoplasm of the brainstem","type":"exact"},{"name":"tumor of brain stem","type":"exact"},{"name":"tumor of brainstem","type":"exact"},{"name":"tumor of the brain stem","type":"exact"},{"name":"tumor of the brainstem","type":"exact"},{"name":"tumour of brain stem","type":"exact"},{"name":"tumour of brainstem","type":"exact"},{"name":"tumour of the brain stem","type":"exact"},{"name":"tumour of the brainstem","type":"exact"}],"termid":"MONDO:0021228","xrefs":{"Monarch":{"xref_id":"0021228"}}}


id: PBO:0091148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidylserine translocation complex subunit Mdm35","termid":"PBO:0091148"}


id: GO:0010305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the leaf of vascular plants.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf vascular tissue pattern formation","termid":"GO:0010305"}


id: PBO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 66","termid":"PBO:0044291"}


id: MONDO:0017881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kyasanura forest disease (KFD), caused by the KFD virus, is an arbovirus characterized by an initial fever, headache and myalgia that can progress to a hemorrhagic disease and that in some cases is followed by a second phase characterized by neurological manifestations.","definition_xrefs":["Orphanet:319254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kyasanur forest disease","secondary_identifiers":["DOID:11320","UMLS:C0022810","icd11.foundation:1288604967","ICD9:065.2","ICD10CM:A98.2","MEDGEN:5982","GARD:8257","MedDRA:10023505","SCTID:23097003","MESH:D007733"],"synonyms":[{"name":"KFD","type":"related"},{"name":"KFD virus","type":"related"},{"name":"Kyasanur forest disease virus caused disease or disorder","type":"exact"},{"name":"Kyasanur forest disease virus disease or disorder","type":"exact"},{"name":"Kyasanur forest disease virus infectious disease","type":"exact"},{"name":"Kyasanur hemorrhagic fever","type":"exact"},{"name":"monkey disease","type":"related"},{"name":"monkey fever","type":"related"}],"termid":"MONDO:0017881","xrefs":{"Monarch":{"xref_id":"0017881"}}}


id: GO:0070110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a receptor for the cytokine ciliary neurotrophic factor (CNTF). In humans the receptor complex is a hexamer composed of two molecules each of CNTF and CNTFR and one molecule each of gp130 and LIFR.","definition_xrefs":["GOC:rl","PMID:12707266","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ciliary neurotrophic factor receptor complex","termid":"GO:0070110"}


id: PBO:0005077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase (predicted)","termid":"PBO:0005077"}


id: PBO:0031405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_cell","termid":"PBO:0031405"}


id: MONDO:0015978
data:
  {"annotated_genes":["SJAG_01960","SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"functional neutrophil defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:183681","SCTID:105600002","MEDGEN:1863601","UMLS:C5924997","icd11.foundation:808756909","GARD:20321"],"synonyms":[{"name":"neutrophil disease","type":"exact"},{"name":"neutrophilopathy","type":"exact"}],"termid":"MONDO:0015978","terms_by_termid":{"MONDO:0009953":null,"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0015978"}}}


id: MONDO:0012104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lipodystrophy characterized by the association of lipoatrophy of the upper part of the body and lipohypertrophy of the thighs.","definition_xrefs":["Orphanet:79087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"partial lipodystrophy","termid":"MONDO:0027767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"acquired partial lipodystrophy","secondary_identifiers":["MEDGEN:66352","MESH:C562448","SCTID:75659004","NANDO:1200862","GARD:10509","UMLS:C0220989","icd11.foundation:2042663302","NCIT:C129723"],"synonyms":[{"name":"APLD","type":"exact"},{"name":"APLD, susceptibility to","type":"related"},{"name":"Barraquer-Simons syndrome","type":"exact"},{"name":"acquired partial lipodystrophy","type":"exact"},{"name":"lipodystophy partial progressive","type":"related"},{"name":"lipodystrophy cephalothoracic type","type":"related"},{"name":"lipodystrophy partial acquired","type":"related"},{"name":"lipodystrophy, cephalothoracic type","type":"related"},{"name":"lipodystrophy, partial, acquired, susceptibility to","type":"related"},{"name":"lipodystrophy, partial, progressive","type":"related"},{"name":"partial acquired lipodystrophy","type":"exact"},{"name":"progressive cephalothoracic lipodystrophy","type":"exact"},{"name":"susceptibility to partial acquired lipodystrophy","type":"related"}],"termid":"MONDO:0012104","xrefs":{"Monarch":{"xref_id":"0012104"}}}


id: PBO:0038590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 9","termid":"PBO:0038590"}


id: GO:0006218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridine metabolic process","termid":"GO:0046108"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside catabolic process","termid":"GO:0046133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"uridine catabolic process","synonyms":[{"name":"uridine breakdown","type":"exact"},{"name":"uridine catabolism","type":"exact"},{"name":"uridine degradation","type":"exact"}],"termid":"GO:0006218"}


id: PBO:0053406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 339","termid":"PBO:0053406"}


id: GO:0030896
data:
  {"annotated_genes":["SJAG_01605","SJAG_02771","SJAG_03026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73254,74254,79163],"is_not":false,"summary":null,"term":"GO:0030896"}]},"cv_name":"cellular_component","definition":"Conserved heterotrimeric complex of PCNA-like proteins that is loaded onto DNA at sites of DNA damage.","definition_xrefs":["PMID:12531008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01605":null,"SJAG_02771":null,"SJAG_03026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"checkpoint clamp complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CCC","type":"exact"},{"name":"Rad9-Hus1-Rad1 (9-1-1) clamp complex","type":"exact"}],"termid":"GO:0030896","terms_by_termid":{"GO:0030896":null}}


id: PBO:0041394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5orf64 antisense RNA 1","termid":"PBO:0041394"}


id: MONDO:0008153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic bone disorder characterized clinically by progressive extraskeletal bone formation presenting in early life with cutaneous ossification, that progressively involves subcutaneous and then subsequently deep connective tissues, including muscle and fascia. POH overlaps with a number of related genetic disorders including Albright hereditary osteodystrophy, pseudohypoparathyroidism (see these terms), and primary osteoma cutis, that share the common features of superficial heterotopic ossification in association with inactivating mutations of GNAS gene (20q13.2-q13.3), coding for guanine nucleotide-binding proteins. POH can, however, be distinguished clinically by the deep and progressive nature of the heterotopic bone formation.","definition_xrefs":["Orphanet:2762"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments (obsolete MONDO:0018231)","termid":"MONDO:0018231"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"progressive osseous heteroplasia","secondary_identifiers":["DOID:0111535","GARD:109","NORD:1618","SCTID:719271000","MESH:C562735","OMIM:166350","MedDRA:10048902","MEDGEN:137714","icd11.foundation:1107209347","UMLS:C0334041"],"synonyms":[{"name":"POH","type":"exact"},{"name":"ectopic ossification familial type","type":"related"},{"name":"ectopic ossification, familial","type":"related"},{"name":"familial ectopic ossification","type":"exact"},{"name":"osseous heteroplasia, progressive","type":"related"},{"name":"osteoma cutis","type":"related"},{"name":"poh","type":"exact"}],"termid":"MONDO:0008153","xrefs":{"Monarch":{"xref_id":"0008153"}}}


id: MONDO:0017819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dentin dysplasia type I","termid":"MONDO:0007436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical dentin dysplasia due to SMOC2 deficiency","secondary_identifiers":["MEDGEN:1673452","Orphanet:314721","GARD:17433","UMLS:C5190802"],"synonyms":[{"name":"dentin dysplasia type 1 with microdontia and shape anomalies","type":"exact"}],"termid":"MONDO:0017819","xrefs":{"Monarch":{"xref_id":"0017819"}}}


id: GO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a cardiac muscle cell population by cell division.","definition_xrefs":["GOC:dph","GOC:rph","PMID:11161571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell proliferation","termid":"GO:0014855"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell proliferation","synonyms":[{"name":"cardiac myocyte proliferation","type":"exact"},{"name":"cardiomyocyte proliferation","type":"related"},{"name":"heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060038"}


id: MONDO:0010047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 5A (SPG5A) is a form of hereditary spastic paraplegia characterized by either a pure phenotype of slowly progressive spastic paraplegia of the lower extremities with bladder dysfunction and pes cavus or a complex presentation with additional manifestations including cerebellar signs, nystagmus, distal or generalized muscle atrophy and cognitive impairment. Age of onset is highly variable, ranging from early childhood to adulthood. White matter hyperintensity and cerebellar and spinal cord atrophy may be noted, on brain magnetic resonance imaging, in some patients.","definition_xrefs":["Orphanet:100986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 5A","secondary_identifiers":["DOID:0110810","GARD:4926","OMIM:270800","SCTID:763373005","UMLS:C1849115","MEDGEN:376521"],"synonyms":[{"name":"CYP7B1 pure or complex autosomal recessive spastic paraplegia","type":"exact"},{"name":"SPG5A","type":"exact"},{"name":"autosomal recessive spastic paraplegia","type":"related"},{"name":"autosomal recessive spastic paraplegia 5A","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 5A","type":"exact"},{"name":"hereditary spastic paraplegia type 5A","type":"exact"},{"name":"pure or complex autosomal recessive spastic paraplegia caused by mutation in CYP7B1","type":"exact"},{"name":"spastic paraplegia 5A","type":"related"},{"name":"spastic paraplegia 5A, autosomal recessive","type":"related"},{"name":"spastic paraplegia type 5A","type":"related"},{"name":"spastic paraplegia type 5B, recessive","type":"exact"}],"termid":"MONDO:0010047","xrefs":{"Monarch":{"xref_id":"0010047"}}}


id: MONDO:0032614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"epidermodysplasia verruciformis, susceptibility to","termid":"MONDO:0100043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermodysplasia verruciformis, susceptibility to, 2","secondary_identifiers":["OMIM:618231","UMLS:C4722258","MEDGEN:1648344"],"synonyms":[{"name":"EPIDERMODYSPLASIA VERRUCIFORMIS, SUSCEPTIBILITY TO, 2","type":"related"},{"name":"EV2","type":"related"},{"name":"epidermodysplasia verruciformis 2","type":"exact"}],"termid":"MONDO:0032614","xrefs":{"Monarch":{"xref_id":"0032614"}}}


id: PBO:0074501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 91","termid":"PBO:0074501"}


id: PBO:0018126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain protein (predicted)","termid":"PBO:0018126"}


id: MONDO:0054754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 8","secondary_identifiers":["OMIM:617900","UMLS:C4693542","MEDGEN:1646997"],"synonyms":[{"name":"Herpes simplex encephalitis, Susceptibility to, 6","type":"related"},{"name":"IIAE8","type":"related"},{"name":"encephalopathy, ACUTE, infection-induced (HERPES-specific), susceptibility to, 8","type":"related"}],"termid":"MONDO:0054754","xrefs":{"Monarch":{"xref_id":"0054754"}}}


id: GO:0103078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + quercetin 3-O-rhamnoside + UDP-L-rhamnose = quercetin-3-rhamnoside-7-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-rhamnoside 7-O-rhamnosyltransferase activity (obsolete GO:0103078)","termid":"GO:0103078"}


id: MONDO:0009770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3MC syndrome in which the cause of the disease is a mutation in the MASP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3MC syndrome","termid":"MONDO:0017398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome 1","secondary_identifiers":["GARD:4049","MEDGEN:167100","DOID:0060575","EFO:1001978","OMIM:257920","Orphanet:2506","UMLS:C0796059"],"synonyms":[{"name":"3MC syndrome 1","type":"exact"},{"name":"3MC syndrome caused by mutation in MASP1","type":"exact"},{"name":"3MC syndrome type 1","type":"exact"},{"name":"3MC1","type":"related"},{"name":"3Mc syndrome type 1","type":"exact"},{"name":"MASP1 3MC syndrome","type":"exact"},{"name":"Michels syndrome","type":"related"},{"name":"Michels syndrome, formerly","type":"related"},{"name":"craniosynostosis with 51D anomalies","type":"related"},{"name":"oculopalatoskeletal syndrome","type":"related"}],"termid":"MONDO:0009770","xrefs":{"Monarch":{"xref_id":"0009770"}}}


id: MOD:01897
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:8557573","PubMed:21788474","RESID:AA0473","PubMed:7592021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"5-hydroxy-3-methyl-L-proline","termid":"MOD:01905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline (Ile)","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro(Ile)","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01897"}


id: GO:1901731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:fj","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of homotypic cell-cell adhesion","termid":"GO:0034112"},{"relation_name":"is_a","term_name":"regulation of platelet aggregation","termid":"GO:0090330"},{"relation_name":"positively_regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of platelet aggregation","synonyms":[{"name":"activation of blood platelet aggregation","type":"narrow"},{"name":"activation of platelet aggregation","type":"narrow"},{"name":"activation of thrombocyte aggregation","type":"related"},{"name":"positive regulation of blood platelet aggregation","type":"exact"},{"name":"positive regulation of thrombocyte aggregation","type":"related"},{"name":"up regulation of blood platelet aggregation","type":"exact"},{"name":"up regulation of platelet aggregation","type":"exact"},{"name":"up regulation of thrombocyte aggregation","type":"related"},{"name":"up-regulation of blood platelet aggregation","type":"exact"},{"name":"up-regulation of platelet aggregation","type":"exact"},{"name":"up-regulation of thrombocyte aggregation","type":"related"},{"name":"upregulation of blood platelet aggregation","type":"exact"},{"name":"upregulation of platelet aggregation","type":"exact"},{"name":"upregulation of thrombocyte aggregation","type":"related"}],"termid":"GO:1901731"}


id: MONDO:0011011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skeletal dysplasia-epilepsy-short stature syndrome is characterized by moderate to severe intellectual deficit, seizures, short stature, and skeletal dysplasia. It has been described in seven patients. Other manifestations can be associated (retinal abnormalities, brachydactyly, prognathism, dental malocclusion). It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1858"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia-epilepsy-short stature syndrome","secondary_identifiers":["MESH:C537625","MEDGEN:208660","GARD:350","SCTID:715428003","OMIM:601187","UMLS:C0796046"],"synonyms":[{"name":"GURRIERI syndrome","type":"related"},{"name":"Gurrieri-Sammito-Bellussi syndrome","type":"exact"},{"name":"intellectual disability, epilepsy, short stature and skeletal dysplasia","type":"related"},{"name":"mental retardation, epilepsy, short stature and skeletal dysplasia","type":"related"}],"termid":"MONDO:0011011","xrefs":{"Monarch":{"xref_id":"0011011"}}}


id: PBO:0109363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 2","termid":"PBO:0109363"}


id: PBO:0041141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4","termid":"PBO:0041141"}


id: PBO:0051551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9 receptor pseudogene 1","termid":"PBO:0051551"}


id: GO:0062068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast photosystem II.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chloroplast photosystem II binding","termid":"GO:0062068"}


id: MONDO:0032655
data:
  {"annotated_genes":["SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86620],"is_not":false,"summary":null,"term":"MONDO:0032655"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02838":null},"genotype_count":0,"is_obsolete":false,"name":"visual impairment and progressive phthisis bulbi","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748978","OMIM:618283","DOID:0070356","MEDGEN:1648430"],"synonyms":[{"name":"VIPB","type":"related"},{"name":"VISUAL IMPAIRMENT AND PROGRESSIVE PHTHISIS BULBI","type":"related"}],"termid":"MONDO:0032655","terms_by_termid":{"MONDO:0032655":null},"xrefs":{"Monarch":{"xref_id":"0032655"}}}


id: GO:0035698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a CD8-positive, alpha-beta cytotoxic T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000794","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}


id: MONDO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign well-circumscribed tumor, composed of lobules of mature adipocytes, that arises within subcutaneous tissue, deep soft tissues or on the surface of bones.","definition_xrefs":["NCIT:C27530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conventional lipoma","secondary_identifiers":["DOID:10193","MEDGEN:272486","UMLS:C1333059"],"synonyms":[{"name":"classic type lipoma","type":"exact"},{"name":"conventional lipoma","type":"exact"}],"termid":"MONDO:0000967","xrefs":{"Monarch":{"xref_id":"0000967"}}}


id: PBO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 21","termid":"PBO:0070791"}


id: PBO:0034315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_neural_circuit_with","termid":"PBO:0034315"}


id: PBO:0066547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 10","termid":"PBO:0066547"}


id: GO:0032993
data:
  {"annotated_genes":["SJAG_05197","SJAG_02098","SJAG_00874","SJAG_04210","SJAG_00335","SJAG_00536","SJAG_01354","SJAG_00814","SJAG_02394","SJAG_03942","SJAG_04245","SJAG_03543","SJAG_00336","SJAG_02194","SJAG_01873","SJAG_03120","SJAG_00327","SJAG_03542","SJAG_04062","SJAG_04341","SJAG_02607","SJAG_03206","SJAG_00863","SJAG_00729","SJAG_04994","SJAG_02818","SJAG_01698","SJAG_01777","SJAG_01762","SJAG_05239","SJAG_04877","SJAG_03780","SJAG_02172","SJAG_02627","SJAG_02074","SJAG_03941","SJAG_01864","SJAG_01523","SJAG_00857","SJAG_01010","SJAG_01624","SJAG_03927","SJAG_04150","SJAG_03451","SJAG_00696","SJAG_02667","SJAG_00302","SJAG_03855","SJAG_00303","SJAG_03685","SJAG_02348","SJAG_05979","SJAG_03092","SJAG_04995","SJAG_03722","SJAG_02182","SJAG_00307","SJAG_02800","SJAG_00272","SJAG_03047","SJAG_05301","SJAG_01378","SJAG_02362","SJAG_01267","SJAG_00884"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73207,75357,75650,70766],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[102380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043505"},{"annotations":[63420,110681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990879"},{"annotations":[77249,71380,103140,75382],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[116549,77501,80641],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[72393,108143,113868,57160,74145,66305,58442,77357,78536,108358,113477,61354,61130,62816,111688,94273,111946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031261"},{"annotations":[80336,79572,80670,70683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000811"},{"annotations":[119907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140573"},{"annotations":[78037,72945,69178,113132,76772,77510],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[61353,72037,111691,57159,61129,62815,108361,108146,74143,111949,66304,110869,103634,58441,113480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005656"},{"annotations":[112817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043601"},{"annotations":[61043,73532,112908,112881,112880,77038,112906,60379,74082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000786"},{"annotations":[80145,92173,100044,95422,90102,116242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070187"},{"annotations":[108246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000782"},{"annotations":[77611,77898,70673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097550"}]},"cv_name":"cellular_component","definition":"A macromolecular complex containing both protein and DNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00327":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01378":null,"SJAG_01523":null,"SJAG_01624":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02194":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_03047":null,"SJAG_03092":null,"SJAG_03120":null,"SJAG_03206":null,"SJAG_03451":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03685":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03927":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_04062":null,"SJAG_04150":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04341":null,"SJAG_04877":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05301":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-DNA complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:24184107":null},"synonyms":[{"name":"DNA-protein complex","type":"exact"}],"termid":"GO:0032993","terms_by_termid":{"GO:0000782":null,"GO:0000786":null,"GO:0000811":null,"GO:0005656":null,"GO:0005658":null,"GO:0005662":null,"GO:0031261":null,"GO:0043505":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null,"GO:0070187":null,"GO:0097550":null,"GO:0140573":null,"GO:1990879":null}}


id: FYPO:0004775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular serine level","termid":"FYPO:0001728"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar serine level","synonyms":[{"name":"increased level of serine in vacuole","type":"exact"},{"name":"increased vacuolar L-serine level","type":"exact"},{"name":"increased vacuolar serine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar serine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004775"}


id: GO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic GABA receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled GABA receptor binding","termid":"GO:0031795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 metabotropic GABA receptor binding","synonyms":[{"name":"type 1 metabotropic GABA receptor ligand","type":"narrow"}],"termid":"GO:0031796"}


id: GO:0021622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the oculomotor nerve is generated and organized. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve morphogenesis","synonyms":[{"name":"CN III morphogenesis","type":"related"}],"termid":"GO:0021622"}


id: PBO:0043254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 12","termid":"PBO:0043254"}


id: GO:0035753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of DNA trinucleotide repeats. DNA trinucleotide repeats are naturally occurring runs of three base-pairs.","definition_xrefs":["GOC:rb","PMID:21347277","SO:0000291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"maintenance of DNA trinucleotide repeats","termid":"GO:0035753"}


id: GO:0036117
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cable structure, surrounding some cell types (e.g. proximal or bronchial tubular epithelial cells), and composed of hyaluranon (HA), a ubiquitous connective tissue glycosaminoglycan.","definition_xrefs":["GOC:yaf","PMID:16900089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"hyaluranon cable","synonyms":[{"name":"HA cable","type":"exact"}],"termid":"GO:0036117"}


id: PBO:0109033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MESD pseudogene 1","termid":"PBO:0109033"}


id: MONDO:1012779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in dogs due to a mutation in the KRT5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, dog","termid":"MONDO:1011500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, KRT5-related, dog","secondary_identifiers":["OMIA:002081-9615"],"termid":"MONDO:1012779","xrefs":{"Monarch":{"xref_id":"1012779"}}}


id: PBO:0041129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD9 antisense RNA 1","termid":"PBO:0041129"}


id: MONDO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Combarros Calleja Leno syndrome","termid":"MONDO:0022810","xrefs":{"Monarch":{"xref_id":"0022810"}}}


id: PBO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTTNBP2 N-terminal like","termid":"PBO:0044217"}


id: GO:0005522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"profilin binding","termid":"GO:0005522"}


id: PBO:0049744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit gamma 2","termid":"PBO:0049744"}


id: GO:2000697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"}


id: GO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of secondary sexual characteristics","termid":"GO:0045136"}


id: GO:0047847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + uracil.","definition_xrefs":["RHEA:22824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-nucleoside phosphorylase activity","termid":"GO:0016154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"deoxyuridine phosphorylase activity","secondary_identifiers":["MetaCyc:URA-PHOSPH-RXN"],"termid":"GO:0047847"}


id: MOD:02033
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(5) HexNAc(3)","definition_xrefs":["PubMed:33135055","Unimod:1484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex5HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(5) HexNAc(3)","type":"related"}],"termid":"MOD:02033"}


id: MONDO:0011128
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87481,87480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"}]},"cv_name":"mondo","definition":"Sheldon-Hall syndrome (SHS) is a rare multiple congenital contracture syndrome characterized by contractures of the distal joints of the limbs, triangular face, downslanting palpebral fissures, small mouth, and high arched palate.","definition_xrefs":["Orphanet:1147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"Sheldon-hall syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1834523","DOID:0111599","icd11.foundation:1206883656","MEDGEN:320374","GARD:16556"],"synonyms":[{"name":"DA2B","type":"exact"},{"name":"Freeman Sheldon syndrome, variant","type":"related"},{"name":"Freeman Sheldon variant","type":"related"},{"name":"Freeman-Sheldon syndrome variant","type":"exact"},{"name":"Sheldon-Hall syndrome","type":"exact"},{"name":"arthrogryposis multiplex congenita distal type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita distal type II with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type II, with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis, distal, type 2B","type":"exact"},{"name":"distal arthrogryposis type 2B","type":"exact"}],"termid":"MONDO:0011128","terms_by_termid":{"MONDO:0032751":null},"xrefs":{"Monarch":{"xref_id":"0011128"}}}


id: MONDO:0019808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital heart defect characterized by the complete failure of the aortic valve to open. It is manifested during infancy with cyanosis, dyspnea, and rapidly progressing heart failure.","definition_xrefs":["NCIT:C98818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"congenital aortic valve stenosis","termid":"MONDO:0017735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve atresia","secondary_identifiers":["MEDGEN:451016","UMLS:C0265843","HP:0010883","icd11.foundation:1700740306","GARD:19260","SCTID:51442005","Orphanet:95448","MedDRA:10066801"],"synonyms":[{"name":"aortic valve atresia","type":"exact"},{"name":"aortic valve atresia (disease)","type":"exact"},{"name":"congenital aortic valve atresia","type":"exact"},{"name":"congenital atresia of aortic valve","type":"exact"}],"termid":"MONDO:0019808","xrefs":{"Monarch":{"xref_id":"0019808"}}}


id: PATO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer exhibiting deterioration of its structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degeneration","termid":"PATO:0002037"}


id: PBO:0054730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2139","termid":"PBO:0054730"}


id: MONDO:0014662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by congenital insensitivity to pain and decreased sweating and tear production that has material basis in homozygous mutation in the PRDM12 gene on chromosome 9q34.","definition_xrefs":["DOID:0070153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005244"],"is_obsolete":false,"name":"congenital insensitivity to pain-hypohidrosis syndrome","secondary_identifiers":["OMIM:616488","Orphanet:478664","MEDGEN:894363","GARD:17866","UMLS:C4225308"],"synonyms":[{"name":"CIP-hypohidrosis syndrome","type":"exact"},{"name":"HSAN 8","type":"related"},{"name":"HSAN8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type VIII","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type 8","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type VIII","type":"related"}],"termid":"MONDO:0014662","xrefs":{"Monarch":{"xref_id":"0014662"}}}


id: MONDO:0007780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertelorism, Teebi type (obsolete MONDO:0007780)","termid":"MONDO:0007780","xrefs":{"Monarch":{"xref_id":"0007780"}}}


id: PBO:0015218
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC14","termid":"PBO:0015218"}


id: PBO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEA domain protein","termid":"PBO:0000738"}


id: PBO:0077036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC3 antisense RNA 1","termid":"PBO:0077036"}


id: PBO:0080373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 3","termid":"PBO:0080373"}


id: PBO:0091197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly","termid":"PBO:0091197"}


id: PBO:0070248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 190 pseudogene","termid":"PBO:0070248"}


id: GO:0006371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which excision of introns from the primary transcript of messenger RNA (mRNA) is followed by ligation of the two exon termini exposed by removal of each intron, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["ISBN:0198506732","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA splicing (obsolete GO:0006371)","synonyms":[{"name":"mRNA splicing","type":"exact"}],"termid":"GO:0006371"}


id: GO:0010674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["PMID:8618927","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010674)","synonyms":[{"name":"activation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"},{"name":"positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0010674"}


id: GO:1990443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own threonine amino acid residues, or a threonine residue on an identical protein.","definition_xrefs":["PMID:7803855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine autophosphorylation","termid":"GO:1990443"}


id: PBO:0005138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rhp42","termid":"PBO:0005138"}


id: PBO:0084261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein, regulates phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane (PM) and regulate PI4P levels by controlling access of Sac1p phosphatase to substrate PI4P in the PM; interacts with FFAT motifs in Opi1p, Swh1p, Osh2p, and Osh3p; involved in telomeric silencing; VAP homolog; SCS2 has a paralog, SCS22, that arose from the whole genome duplication","termid":"PBO:0084261"}


id: PBO:0051235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-40-1 (pseudogene)","termid":"PBO:0051235"}


id: PBO:0045108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin","termid":"PBO:0045108"}


id: MONDO:0020150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsolete rare palpebral, lacrimal system and conjunctival disease (obsolete MONDO:0020150)","secondary_identifiers":["Orphanet:98559"],"termid":"MONDO:0020150","xrefs":{"Monarch":{"xref_id":"0020150"}}}


id: PR:O74523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC70.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase inhibitor, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.02c","synonyms":[{"name":"Spom972h-SPCC70.02c","type":"exact"}],"termid":"PR:O74523"}


id: PATO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being capable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porous","termid":"PATO:0000984"}


id: GO:0072327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a nematode vulval cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed adult vulva, which is the egg-laying organ of female and hermaphrodite nematodes.","definition_xrefs":["GOC:mah","ISBN:087969307X","GOC:kmv","PMID:11236714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"vulval cell fate commitment","termid":"GO:0072325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval cell fate specification","termid":"GO:0072327"}


id: MONDO:1010978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, sheep","secondary_identifiers":["OMIA:000485-9940"],"termid":"MONDO:1010978","xrefs":{"Monarch":{"xref_id":"1010978"}}}


id: PBO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase Nnt1 (predicted)","termid":"PBO:0001780"}


id: PATO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001144 ig g concentration value (obsolete PATO:0001144)","termid":"PATO:0001144"}


id: PBO:0088656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, chaperone for V-type ATPase, BIG1 family","termid":"PBO:0088656"}


id: PR:O94346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine biosynthesis bifunctional protein ArgJ, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.14","synonyms":[{"name":"Spom972h-SPBC1271.14","type":"exact"}],"termid":"PR:O94346"}


id: PBO:0087002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor; involved in the localization and regulation of Cdc42p and Rho1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087002"}


id: PBO:0070546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 12","termid":"PBO:0070546"}


id: PBO:0085197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Osmotic stress-responsive phosphorelay intermediate sensor protein; phosphorylated by the plasma membrane sensor Sln1p in response to osmotic stress and then in turn phosphorylates the response regulators Ssk1p in the cytosol and Skn7p in the nucleus","termid":"PBO:0085197"}


id: PBO:0117189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGR3 and PEBP4 antisense RNA 1","termid":"PBO:0117189"}


id: FYECO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which MMS (methyl methanesulfonate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MMS","synonyms":[{"name":"methyl methanesulfonate added","type":"exact"}],"termid":"FYECO:0000211"}


id: PR:O13681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ima1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein ima1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.03c","synonyms":[{"name":"Spom972h-ima1","type":"exact"}],"termid":"PR:O13681"}


id: GO:0005222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly cAMP-activated cation channel activity","synonyms":[{"name":"HCN channel activity","type":"broad"},{"name":"hyperpolarization-activated cyclic nucleotide-gated channel activity","type":"broad"},{"name":"intracellular 3',5' cAMP activated cation channel activity","type":"exact"},{"name":"intracellular 3',5'-cAMP activated cation channel activity","type":"exact"},{"name":"intracellular adenosine 3',5'-cyclophosphate activated cation channel activity","type":"exact"},{"name":"intracellular cAMP activated cation channel activity","type":"exact"},{"name":"intracellular cAMP-activated cation channel activity","type":"exact"},{"name":"intracellular cyclic AMP activated cation channel activity","type":"exact"}],"termid":"GO:0005222"}


id: GO:1904295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["PMID:18279313","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmolarity-sensing cation channel activity (obsolete GO:1904295)","termid":"GO:1904295"}


id: GO:0008065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-nerve barrier","synonyms":[{"name":"establishment of blood/nerve barrier","type":"exact"}],"termid":"GO:0008065"}


id: PBO:0071833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 28","termid":"PBO:0071833"}


id: GO:0005283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"amino acid:sodium symporter activity","secondary_identifiers":["GO:0005284","GO:0005285"],"synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"},{"name":"insulin-activated sodium/amino acid transporter activity","type":"narrow"},{"name":"insulin-activated sodium:amino acid symporter activity","type":"narrow"},{"name":"insulin-activated sodium:amino acid transporter activity","type":"narrow"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"sodium/amino acid transporter activity","type":"broad"},{"name":"sodium/excitatory amino acid cotransporter activity","type":"broad"},{"name":"sodium/excitatory amino acid symporter activity","type":"exact"},{"name":"sodium:amino acid symporter activity","type":"exact"},{"name":"sodium:amino acid transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"narrow"}],"termid":"GO:0005283"}


id: FYPO:0000467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased invasive growth (obsolete FYPO:0000467)","synonyms":[{"name":"invasive growth: increased","type":"related"}],"termid":"FYPO:0000467"}


id: PBO:0088719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent RNA helicase Mrh5","termid":"PBO:0088719"}


id: GO:0141160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of host phagosomes.","definition_xrefs":["PMID:15487949","PMID:30057173","PMID:21412437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host phagosome","termid":"GO:0141160"}


id: MONDO:0971108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus","termid":"MONDO:0018072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"common arterial trunk with pulmonary dominance and interrupted aortic arch","secondary_identifiers":["MEDGEN:1612764","Orphanet:665058","UMLS:C4546068"],"termid":"MONDO:0971108","xrefs":{"Monarch":{"xref_id":"0971108"}}}


id: GO:0019051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a viral gene product activates host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host apoptotic process (obsolete GO:0019051)","synonyms":[{"name":"activation by virus of host apoptosis","type":"exact"},{"name":"activation by virus of host apoptotic programmed cell death","type":"exact"},{"name":"activation of apoptosis in host by virus","type":"exact"},{"name":"activation of host caspases by virus","type":"narrow"},{"name":"induction by virus of host apoptosis","type":"narrow"},{"name":"induction by virus of host apoptotic programmed cell death","type":"exact"},{"name":"induction by virus of host caspase activity","type":"narrow"},{"name":"induction by virus of host cysteine-type endopeptidase activity involved in apoptotic process","type":"narrow"},{"name":"induction of apoptosis in host by virus","type":"exact"},{"name":"positive regulation of apoptosis by virus","type":"narrow"},{"name":"positive regulation of apoptotic process by virus","type":"exact"}],"termid":"GO:0019051"}


id: PBO:0079374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 9","termid":"PBO:0079374"}


id: FYPO:0003721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing G418.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on G418","synonyms":[{"name":"normal cell population growth in presence of G418","type":"exact"},{"name":"normal cell population growth on G418","type":"exact"},{"name":"normal cell population growth on Geneticin","type":"exact"},{"name":"normal cellular response to G418","type":"related"},{"name":"normal vegetative cell population growth on G418","type":"exact"}],"termid":"FYPO:0003721"}


id: PBO:0064731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 67","termid":"PBO:0064731"}


id: MONDO:0957301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 84","secondary_identifiers":["UMLS:C5830562","DOID:0070583","MEDGEN:1841198","OMIM:620409"],"termid":"MONDO:0957301","xrefs":{"Monarch":{"xref_id":"0957301"}}}


id: FYPO:0000668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased peptidase activity","synonyms":[{"name":"decreased protease activity","type":"exact"},{"name":"reduced peptidase activity","type":"exact"}],"termid":"FYPO:0000668"}


id: FYPO:0007131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends end of microtubules is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to microtubule plus-end","synonyms":[{"name":"increased protein localisation to microtubule plus-end","type":"exact"},{"name":"increased protein localization to microtubule plus end","type":"exact"},{"name":"increased protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"increased protein localization to microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0007131"}


id: MONDO:0006798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A symptom complex resulting from ingesting excessive amounts of vitamin A.","definition_xrefs":["MESH:D006986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overnutrition","termid":"MONDO:0003916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypervitaminosis A","secondary_identifiers":["MEDGEN:9378","UMLS:C0020579","icd11.foundation:1465667896","EFO:1000978","ICD10CM:E67.0","ICD9:278.2","MedDRA:10020916","SCTID:64559002","DOID:9972"],"synonyms":[{"name":"hypervitaminosis type A","type":"exact"}],"termid":"MONDO:0006798","xrefs":{"Monarch":{"xref_id":"0006798"}}}


id: MONDO:0850450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute biphenotypic leukemia that is characterized by blasts which carry a translocation between the MLL (KMT2A) gene at 11q23.3 and another gene partner.","definition_xrefs":["DOID:0081037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute biphenotypic leukemia","termid":"MONDO:0020322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"mixed phenotype acute leukemia with MLL rearranged","termid":"MONDO:0850450","xrefs":{"Monarch":{"xref_id":"0850450"}}}


id: MONDO:1011944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, non-human animal","secondary_identifiers":["OMIA:000354"],"termid":"MONDO:1011944","xrefs":{"Monarch":{"xref_id":"1011944"}}}


id: PBO:0062007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 1","termid":"PBO:0062007"}


id: PBO:0065384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 11","termid":"PBO:0065384"}


id: GO:0009159
data:
  {"annotated_genes":["SJAG_01974","SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76133,117478],"is_not":false,"summary":null,"term":"GO:0009159"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009159","terms_by_termid":{"GO:0009159":null}}


id: PBO:0047777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXC1 upstream transcript","termid":"PBO:0047777"}


id: PBO:0052002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional cadherin 5 associated","termid":"PBO:0052002"}


id: PBO:0079860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-119 lipid binding chaperone","termid":"PBO:0079860"}


id: PBO:0042763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 57","termid":"PBO:0042763"}


id: PBO:0017680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) (predicted)","termid":"PBO:0017680"}


id: MONDO:0011976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipodystrophy-intellectual disability-deafness syndrome is an extremely rare form of genetic lipodystrophy, reported in 3 patients from one family to date, characterized by generalized congenital lipodystrophy, low birth weight, progressive sensorineural deafness occurring in childhood, intellectual deficit, progressive osteopenia, delayed skeletal maturation, skeletal abnormalities described as slender, undermineralized tubular bones, and dense metaphyseal striations in the distal femur, ulna and radius of older patients. Autosomal recessive inheritance has been suggested.","definition_xrefs":["Orphanet:50811"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"lipodystrophy-intellectual disability-deafness syndrome","secondary_identifiers":["UMLS:C1842465","MESH:C564283","MEDGEN:334166","OMIM:608154","SCTID:721973006","GARD:16646"],"synonyms":[{"name":"Rajab-Spranger syndrome","type":"exact"},{"name":"lipodystrophy, generalized, with intellectual disability, deafness, short stature, and slender bones","type":"related"},{"name":"lipodystrophy, generalized, with mental retardation, deafness, short stature, and slender bones","type":"related"}],"termid":"MONDO:0011976","xrefs":{"Monarch":{"xref_id":"0011976"}}}


id: MONDO:1010635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor X deficiency, non-human animal","termid":"MONDO:1010072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, domestic cat","secondary_identifiers":["OMIA:000362-9685"],"termid":"MONDO:1010635","xrefs":{"Monarch":{"xref_id":"1010635"}}}


id: GO:0004312
data:
  {"annotated_genes":["SJAG_04972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58545,59918],"is_not":false,"summary":null,"term":"GO:0004312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADPH + 2n H+ = long-chain fatty acid + n+1 CoA + n CO2 + 2n NADP+.","definition_xrefs":["EC:2.3.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"fatty acid synthase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:FATTY-ACID-SYNTHASE-RXN","Reactome:R-HSA-75872","Reactome:R-HSA-163756","RHEA:14993"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing and thioester-hydrolysing)","type":"related"},{"name":"fatty-acid synthase activity","type":"exact"}],"termid":"GO:0004312","terms_by_termid":{"GO:0004312":null}}


id: MONDO:0044995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the parasympathetic nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasympathetic nervous system disorder","secondary_identifiers":["MEDGEN:148205","UMLS:C0750945","SCTID:46091002"],"synonyms":[{"name":"disease of parasympathetic nervous system","type":"exact"},{"name":"disease or disorder of parasympathetic nervous system","type":"exact"},{"name":"disorder of parasympathetic nervous system","type":"exact"},{"name":"parasympathetic nervous system disease","type":"exact"},{"name":"parasympathetic nervous system disease or disorder","type":"exact"}],"termid":"MONDO:0044995","xrefs":{"Monarch":{"xref_id":"0044995"}}}


id: PBO:0013119
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that suppresses Calcineurin deletion","termid":"PBO:0013119"}


id: PBO:0045460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal inhibitory axon guidance protein pseudogene 1","termid":"PBO:0045460"}


id: MONDO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cervicitis (disease) caused by infection with Trichomonas vaginalis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"},{"relation_name":"is_a","term_name":"cervicitis","termid":"MONDO:0002345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas cervicitis","secondary_identifiers":["NCIT:C35588","UMLS:C0742232","MEDGEN:149274"],"synonyms":[{"name":"Trichomonas cervicitis","type":"exact"},{"name":"Trichomonas vaginalis caused cervicitis (disease)","type":"exact"},{"name":"Trichomonas vaginalis cervicitis (disease)","type":"exact"}],"termid":"MONDO:0030708","xrefs":{"Monarch":{"xref_id":"0030708"}}}


id: GO:0060866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a leaf.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf abscission","termid":"GO:0060866"}


id: PBO:0054731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2140","termid":"PBO:0054731"}


id: GO:0099552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of lipid molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["PMID:21531987","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by lipid","termid":"GO:0099541"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by lipid, modulating synaptic transmission","termid":"GO:0099552"}


id: PBO:0075237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 9","termid":"PBO:0075237"}


id: GO:0048823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a nucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte development","termid":"GO:0048821"},{"relation_name":"part_of","term_name":"nucleate erythrocyte differentiation","termid":"GO:0043363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleate erythrocyte development","synonyms":[{"name":"nucleate RBC development","type":"exact"},{"name":"nucleate red blood cell development","type":"exact"}],"termid":"GO:0048823"}


id: GO:1904636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ionomycin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:17516843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ionomycin","termid":"GO:1904636"}


id: PBO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase (predicted)","termid":"PBO:0001614"}


id: MONDO:0100046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing exfoliation syndrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exfoliation syndrome, susceptibility to","secondary_identifiers":["UMLS:C4016255","OMIM:177650","MEDGEN:864692"],"synonyms":[{"name":"pseudoexfoliation glaucoma","type":"related"},{"name":"pseudoexfoliation of the lens","type":"related"},{"name":"pseudoexfoliation syndrome","type":"related"}],"termid":"MONDO:0100046","xrefs":{"Monarch":{"xref_id":"0100046"}}}


id: PBO:0051802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain ArfGEF 1","termid":"PBO:0051802"}


id: PBO:0044559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death domain associated protein","termid":"PBO:0044559"}


id: SO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby a chromosome generated by recombination between two inversions; has a deficiency at one end and presumed to have a deficiency or duplication at the other end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_deficiency_plus_aneuploid","synonyms":[{"name":"inversion derived deficiency plus aneuploid","type":"exact"}],"termid":"SO:0000512"}


id: PBO:0065958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23 homolog B, nucleotide excision repair protein","termid":"PBO:0065958"}


id: PBO:0017948
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SEC12","termid":"PBO:0017948"}


id: GO:0034729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to lysine at position 79 of the histone.","definition_xrefs":["GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 methylation (obsolete GO:0034729)","synonyms":[{"name":"histone H3 K79 methylation","type":"exact"},{"name":"histone H3K79me","type":"exact"},{"name":"histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:0034729"}


id: GO:2001287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"negatively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of caveolin-mediated endocytosis","synonyms":[{"name":"negative regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"negative regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"negative regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001287"}


id: PBO:0089054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2","termid":"PBO:0089054"}


id: PR:Q9UTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgf2 gene.","definition_xrefs":["UniProtKB:Q9UTR5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1 guanine nucleotide exchange factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.06","synonyms":[{"name":"Spom972h-rgf2","type":"exact"}],"termid":"PR:Q9UTR5"}


id: GO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 4 production","termid":"GO:0071643"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"positive regulation of CCL4 production","type":"exact"},{"name":"positive regulation of MIP-1b production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071645"}


id: MONDO:0007928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Fechtner syndrome (obsolete MONDO:0007928)","secondary_identifiers":["NCIT:C131642"],"termid":"MONDO:0007928","xrefs":{"Monarch":{"xref_id":"0007928"}}}


id: PBO:0087042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1B; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1B has a paralog, RPL1A, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087042"}


id: PBO:0065159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 9","termid":"PBO:0065159"}


id: PBO:0109408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, RNA methyltransferase Bmc1","termid":"PBO:0109408"}


id: MONDO:0004870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diabetic neuropathy (obsolete MONDO:0004870)","termid":"MONDO:0004870","xrefs":{"Monarch":{"xref_id":"0004870"}}}


id: MONDO:0024574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary or acquired coagulation disorder characterized by a qualitative or quantitative deficiency of the von Willebrand factor. The latter plays an important role in platelet adhesion. Signs and symptoms include bruises, nose bleeding, gum bleeding following a dental procedure, heavy menstrual bleeding, and gastrointestinal bleeding.","definition_xrefs":["NCIT:C68677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease (hereditary or acquired)","secondary_identifiers":["SCTID:128105004","UMLS:C0042974","MEDGEN:22686","MESH:D014842","ICD9:286.4","NANDO:2200682","ICD10CM:D68.0"],"synonyms":[{"name":"VWD","type":"exact"},{"name":"Von Willebrand Disease","type":"exact"},{"name":"von Willebrand disease","type":"related"},{"name":"von Willebrand disorder","type":"exact"},{"name":"von Willebrand's disease","type":"exact"}],"termid":"MONDO:0024574","xrefs":{"Monarch":{"xref_id":"0024574"}}}


id: GO:0051164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylitol, a five-carbon sugar alcohol derived from xylose by reduction of the carbonyl group. It is as sweet as sucrose and is used as a noncariogenic sweetner and as a sugar substitute in diabetic diets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"xylitol metabolic process","synonyms":[{"name":"xylitol metabolism","type":"exact"}],"termid":"GO:0051164"}


id: PR:O42874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- peg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein peg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.12","synonyms":[{"name":"Spom972h-peg1","type":"exact"}],"termid":"PR:O42874"}


id: PBO:0055742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1A antisense RNA 2","termid":"PBO:0055742"}


id: GO:0038176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the SREBP signaling pathway in response to a decrease in oxygen levels.","definition_xrefs":["GOC:al","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of SREBP signaling pathway","termid":"GO:2000640"},{"relation_name":"part_of","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of SREBP signaling pathway in response to decreased oxygen levels","synonyms":[{"name":"positive regulation of SREBP-mediated signaling pathway in absence of oxygen","type":"related"},{"name":"positive regulation of SREBP-mediated signaling pathway in response to decreased oxygen levels","type":"exact"}],"termid":"GO:0038176"}


id: PATO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ploidy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ploidy","termid":"PATO:0001374"}


id: PBO:0062045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 32 pseudogene","termid":"PBO:0062045"}


id: GO:0045916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"negatively_regulates","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation","synonyms":[{"name":"down regulation of complement activation","type":"exact"},{"name":"down-regulation of complement activation","type":"exact"},{"name":"downregulation of complement activation","type":"exact"},{"name":"inhibition of complement activation","type":"narrow"},{"name":"negative regulation of complement cascade","type":"exact"}],"termid":"GO:0045916"}


id: PBO:0077745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of EGR1, exonuclease","termid":"PBO:0077745"}


id: PBO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1 (predicted)","termid":"PBO:0017633"}


id: GO:0060352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cell adhesion molecule due to biosynthesis or secretion.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion molecule production","termid":"GO:0060352"}


id: MONDO:0011651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, short stature, facial anomalies, and joint dislocations","secondary_identifiers":["UMLS:C1853507","OMIM:606220","MEDGEN:342897","MESH:C565248"],"synonyms":[{"name":"intellectual developmental disorder with short stature, facial anomalies, and speech defects","type":"exact"},{"name":"intellectual disability, short stature, facial anomalies, and JOINT dislocations","type":"related"},{"name":"mental retardation, short stature, facial anomalies, and JOINT dislocations","type":"related"}],"termid":"MONDO:0011651","xrefs":{"Monarch":{"xref_id":"0011651"}}}


id: PBO:0089344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ATPase subunit Caf16","termid":"PBO:0089344"}


id: PBO:0062617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily W member 1","termid":"PBO:0062617"}


id: GO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces a host NF-kappaB cascade.","definition_xrefs":["PMID:25275128","PMID:10920188"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host NF-kappaB cascade (obsolete GO:0039644)","synonyms":[{"name":"inhibition of host NF-kappa-B by virus","type":"exact"},{"name":"suppression by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039644"}


id: PBO:0046938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member C","termid":"PBO:0046938"}


id: GO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell in the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"ureter smooth muscle development","termid":"GO:0072191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}


id: PBO:0086321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hect domain E3 ubiquitin-protein ligases; not essential for viability; found in association with Trf4 in TRAMP complex","termid":"PBO:0086321"}


id: PBO:0046739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 5","termid":"PBO:0046739"}


id: SO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminal region of DNA sequence where the end of the region is not blunt ended and the exposed single strand terminates at the 5' end.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_single_strand_overhang","termid":"SO:0001695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_five_prime_single_strand_overhang","synonyms":[{"name":"restriction enzyme five prime single strand overhang","type":"exact"}],"termid":"SO:0001932"}


id: MONDO:0006032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystitis","secondary_identifiers":["MESH:D003556","NCIT:C26738","DOID:1679","ICD9:595","EFO:1000025","ICD9:595.89","SCTID:38822007","ICD9:595.9","MEDGEN:8227","icd11.foundation:1181120673","UMLS:C0010692"],"synonyms":[{"name":"bladder infection","type":"exact"},{"name":"inflammation of urinary bladder","type":"exact"},{"name":"urinary bladder inflammation","type":"exact"}],"termid":"MONDO:0006032","xrefs":{"Monarch":{"xref_id":"0006032"}}}


id: PR:Q9USI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15184401","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.05c","secondary_identifiers":["PR:000027729","UniProtKB:Q9USI6"],"synonyms":[{"name":"SPCC645.05C","type":"related"},{"name":"Spom972h-myo2","type":"exact"}],"termid":"PR:Q9USI6"}


id: PBO:0029492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiosis_II","termid":"PBO:0029492"}


id: PBO:0047345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2 pseudogene 1","termid":"PBO:0047345"}


id: MONDO:0010212
data:
  {"annotated_genes":["SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87032],"is_not":false,"summary":null,"term":"MONDO:0010212"}]},"cv_name":"mondo","definition":"Any xeroderma pigmentosum in which the cause of the disease is a mutation in the ERCC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum-Cockayne syndrome complex","termid":"MONDO:0016354"},{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0021190"],"is_obsolete":false,"name":"xeroderma pigmentosum group D","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16452","NCIT:C3967","UMLS:C0268138","MESH:C562591","OMIM:278730","SCTID:68637004","MEDGEN:75656","Orphanet:276258","DOID:0110845"],"synonyms":[{"name":"ERCC2 xeroderma pigmentosum","type":"exact"},{"name":"XP group D","type":"exact"},{"name":"XP group H","type":"exact"},{"name":"XP, Group D","type":"related"},{"name":"XP, Group H","type":"related"},{"name":"XP, Group H, formerly","type":"related"},{"name":"XP-D","type":"exact"},{"name":"XP4","type":"exact"},{"name":"XP4 xeroderma pigmentosum VIII","type":"related"},{"name":"XP4 xeroderma pigmentosum VIII, formerly","type":"related"},{"name":"XP8","type":"exact"},{"name":"XPD","type":"exact"},{"name":"XPDC","type":"exact"},{"name":"XPH","type":"exact"},{"name":"xeroderma pigmentosum 4","type":"related"},{"name":"xeroderma pigmentosum IV","type":"exact"},{"name":"xeroderma pigmentosum VIII","type":"exact"},{"name":"xeroderma pigmentosum caused by mutation in ERCC2","type":"exact"},{"name":"xeroderma pigmentosum group D","type":"exact"},{"name":"xeroderma pigmentosum group type D","type":"exact"},{"name":"xeroderma pigmentosum, complementation group D","type":"related"},{"name":"xeroderma pigmentosum, complementation group type D","type":"exact"},{"name":"xeroderma pigmentosum, group D","type":"exact"}],"termid":"MONDO:0010212","terms_by_termid":{"MONDO:0010212":null},"xrefs":{"Monarch":{"xref_id":"0010212"}}}


id: PBO:0048522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 5","termid":"PBO:0048522"}


id: PR:O60152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.02","secondary_identifiers":["UniProtKB:O60152"],"synonyms":[{"name":"N-end-recognizing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBR2","type":"exact"}],"termid":"PR:O60152"}


id: PBO:0030654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methylamine","termid":"PBO:0030654"}


id: GO:1902014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(glycerol phosphate) teichoic acid.","definition_xrefs":["PMID:11882717","GOC:TermGenie","UniPathway:UPA00827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"poly(glycerol phosphate) teichoic acid metabolic process","termid":"GO:1902013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid biosynthetic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid anabolism","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid formation","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid synthesis","type":"exact"}],"termid":"GO:1902014"}


id: GO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont reactive oxygen species production (obsolete GO:0052570)","synonyms":[{"name":"response to defense-related symbiont reactive oxygen species production","type":"exact"}],"termid":"GO:0052570"}


id: MONDO:1012324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal paralysis, non-human animal","termid":"MONDO:1011928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal paralysis, cattle","secondary_identifiers":["OMIA:001206-9913"],"termid":"MONDO:1012324","xrefs":{"Monarch":{"xref_id":"1012324"}}}


id: GO:0034428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 5' end is not protected by a 5'-cap; degradation proceeds in the 5' to 3' direction.","definition_xrefs":["GOC:krc","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3' (obsolete GO:0034428)","termid":"GO:0034428"}


id: PBO:0059655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 21","termid":"PBO:0059655"}


id: GO:0002797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antibacterial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"regulates","term_name":"antibacterial peptide secretion","termid":"GO:0002779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of antibacterial peptide secretion","termid":"GO:0002797"}


id: MONDO:1012981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anemia, non-human animal","termid":"MONDO:1012981","xrefs":{"Monarch":{"xref_id":"1012981"}}}


id: PBO:0059063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3B","termid":"PBO:0059063"}


id: MONDO:0014376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder with microcephaly and with or without ocular malformations or hypogonadotropic hypogonadism","secondary_identifiers":["UMLS:C4014528","OMIM:615866","DOID:0070057","GARD:16023","MEDGEN:862965"],"synonyms":[{"name":"CSS9","type":"exact"},{"name":"Coffin-Siris syndrome 9","type":"exact"},{"name":"MRD27","type":"exact"},{"name":"autosomal dominant intellectual disability 27","type":"exact"},{"name":"autosomal dominant mental retardation 27","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 27","type":"related"},{"name":"intellectual disability, autosomal dominant 27","type":"exact"},{"name":"intellectual disability, autosomal dominant type 27","type":"exact"},{"name":"mental retardation, autosomal dominant 27","type":"related"},{"name":"mental retardation, autosomal dominant type 27","type":"exact"}],"termid":"MONDO:0014376","xrefs":{"Monarch":{"xref_id":"0014376"}}}


id: PBO:0082720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cell cycle-regulated genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; homolog of human PD2/hPAF1","termid":"PBO:0082720"}


id: GO:1903117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament organization involved in cytokinetic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24798735"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament organization involved in cytokinetic actomyosin contractile ring assembly (obsolete GO:1903117)","synonyms":[{"name":"regulation of actin filament organisation of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organisation of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament organization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organization of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:1903117"}


id: PATO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having two lobes.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/bilobed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilobed","termid":"PATO:0002214"}


id: PBO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3101","termid":"PBO:0015699"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: PBO:0043628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit alpha","termid":"PBO:0043628"}


id: GO:0061885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of mini excitatory postsynaptic potential. Mini excitatory postsynaptic potential is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:20395454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mini excitatory postsynaptic potential","termid":"GO:0061884"},{"relation_name":"is_a","term_name":"positive regulation of excitatory postsynaptic potential","termid":"GO:2000463"},{"relation_name":"positively_regulates","term_name":"mini excitatory postsynaptic potential","termid":"GO:0098816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mini excitatory postsynaptic potential","termid":"GO:0061885"}


id: MOD:01059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(81)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01059"}


id: GO:0160217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription initiation-coupled chromatin remodeling.","definition_xrefs":["PMID:33980486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"negative regulation of chromatin organization","termid":"GO:1905268"},{"relation_name":"negatively_regulates","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription initiation-coupled chromatin remodeling","termid":"GO:0160217"}


id: MONDO:0018441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatitis delta (obsolete MONDO:0018441)","termid":"MONDO:0018441","xrefs":{"Monarch":{"xref_id":"0018441"}}}


id: GO:0045056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"transcytosis","secondary_identifiers":["Wikipedia:Transcytosis"],"termid":"GO:0045056"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: MONDO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibular collateral ligament bursitis","secondary_identifiers":["DOID:9358","ICD9:726.63","SCTID:77323000","MEDGEN:510512","UMLS:C0158316"],"termid":"MONDO:0004764","xrefs":{"Monarch":{"xref_id":"0004764"}}}


id: PBO:0091221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb4","termid":"PBO:0091221"}


id: PATO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous","termid":"PATO:0000688"}


id: SO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is the result of some arbitrary experimental procedure. The procedure may be carried out with biological material or inside a computer.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental_feature","synonyms":[{"name":"analysis feature","type":"related"},{"name":"experimental output artefact","type":"exact"},{"name":"experimental_output_artefact","type":"exact"}],"termid":"SO:0001410"}


id: PATO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001219 area_unit (obsolete PATO:0001219)","termid":"PATO:0001219"}


id: GO:0140991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cytoplasmic post-transcriptional gene silencing pathway in which piRNAs direct the cleavage of target mRNAs. The target mRNA, often transcribed from a transposable element, is destabilized by the activity of a PIWI class endonuclease within the piRNA-induced silencing complex. This may also be accompanied by mRNA deadenylation and decapping.","definition_xrefs":["PMID:33419460","PMID:29281264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"}


id: GO:0010614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle hypertrophy","termid":"GO:0010611"},{"relation_name":"is_a","term_name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle hypertrophy","termid":"GO:0010614"}


id: GO:0043210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkanesulfonate binding","termid":"GO:0043210"}


id: MONDO:0012243
data:
  {"annotated_genes":["SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85511],"is_not":false,"summary":null,"term":"MONDO:0012243"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03567":null},"genotype_count":0,"is_obsolete":false,"name":"B-cell immunodeficiency, distal limb anomalies, and urogenital malformations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1836437","MESH:C563745","OMIM:609296","MEDGEN:332208","Orphanet:567502"],"synonyms":[{"name":"B-cell immunodeficiency, distal limb anomalies, and urogenital malformations","type":"exact"},{"name":"B-cell immunodeficiency-limb anomaly-urogenital malformation syndrome","type":"exact"},{"name":"BILU syndrome","type":"exact"},{"name":"Hoffman syndrome","type":"exact"}],"termid":"MONDO:0012243","terms_by_termid":{"MONDO:0012243":null},"xrefs":{"Monarch":{"xref_id":"0012243"}}}


id: PBO:0038609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 5","termid":"PBO:0038609"}


id: PBO:0040632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 1","termid":"PBO:0040632"}


id: MONDO:1010231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, non-human animal","secondary_identifiers":["OMIA:000485"],"termid":"MONDO:1010231","xrefs":{"Monarch":{"xref_id":"1010231"}}}


id: PBO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DRB1","termid":"PBO:0001162"}


id: PBO:0026770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_uracil_import","termid":"PBO:0026770"}


id: PR:G2TRR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.16","synonyms":[{"name":"Spom972h-SPBC13G1.16","type":"exact"}],"termid":"PR:G2TRR7"}


id: PBO:0073842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC8A1 antisense RNA 1","termid":"PBO:0073842"}


id: MONDO:1012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cystinuria that occurs in cats due to a mutation in the SLC7A9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria, SLC7A9-related, domestic cat","secondary_identifiers":["OMIA:002023-9685"],"synonyms":[{"name":"cystinuria, type B, domestic cat","type":"related"}],"termid":"MONDO:1012773","xrefs":{"Monarch":{"xref_id":"1012773"}}}


id: MONDO:1010137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bullous pemphigoid that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous pemphigoid, non-human animal","secondary_identifiers":["OMIA:001183"],"termid":"MONDO:1010137","xrefs":{"Monarch":{"xref_id":"1010137"}}}


id: PBO:0069505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 772, pseudogene","termid":"PBO:0069505"}


id: PBO:0081842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 776","termid":"PBO:0081842"}


id: PBO:0053220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LGALSL divergent transcript","termid":"PBO:0053220"}


id: PATO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quaity inhering in a bearer by virtue of the bearer's containing of or pertaining to fibrils, or nanoscale fibers.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillary","synonyms":[{"name":"fibrillate","type":"exact"}],"termid":"PATO:0002134"}


id: MONDO:0014425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hereditary persistence of alpha-fetoprotein is a benign genetic condition characterized by persistence of high alpha-fetoprotein (AFP) levels throughout life, with no associated clinical disability and thus no need for specific therapy","definition_xrefs":["Orphanet:168615"],"gene_count":0,"genotype_count":0,"name":"obsolete hereditary persistence of alpha-fetoprotein (obsolete MONDO:0014425)","secondary_identifiers":["SCTID:716697002","OMIM:615970"],"synonyms":[{"name":"ALPHA-fetoprotein, hereditary persistence OF","type":"related"},{"name":"HPAFP","type":"related"},{"name":"hereditary persistence of alpha-fetoprotein","type":"exact"}],"termid":"MONDO:0014425","xrefs":{"Monarch":{"xref_id":"0014425"}}}


id: PBO:0075859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 7","termid":"PBO:0075859"}


id: PBO:0062981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoautosomal boundary region, X-linked","termid":"PBO:0062981"}


id: PBO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-J-shaped_vegetative_cell","termid":"PBO:0036016"}


id: PBO:0110034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF2BP1 associated definitive endoderm lncRNA","termid":"PBO:0110034"}


id: GO:2000363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-E synthase activity","synonyms":[{"name":"positive regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"positive regulation of PGE isomerase activity","type":"exact"},{"name":"positive regulation of PGE2 isomerase activity","type":"exact"},{"name":"positive regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"positive regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"positive regulation of endoperoxide isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000363"}


id: PR:P87111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10617:SF1","PRO:DNx","OMA:SCHPO00565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.04c","secondary_identifiers":["UniProtKB:P87111"],"synonyms":[{"name":"ETF dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ETF-QO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ETF-ubiquinone oxidoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ETFDH","type":"exact"},{"name":"electron-transferring-flavoprotein dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87111"}


id: PATO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organization quality","termid":"PATO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorganized","termid":"PATO:0000937"}


id: PBO:0044284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 38","termid":"PBO:0044284"}


id: GO:0042285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"xylosyltransferase activity","termid":"GO:0042285"}


id: PBO:0049083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137C","termid":"PBO:0049083"}


id: PBO:0056968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 24-2","termid":"PBO:0056968"}


id: MONDO:0018663
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86893],"is_not":false,"summary":null,"term":"MONDO:0018663"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"is_obsolete":false,"name":"regressive spondylometaphyseal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618019","Orphanet:448267","UMLS:C4747922","GARD:17782","MEDGEN:1648288"],"synonyms":[{"name":"Pelger-Huet anomaly with mild skeletal anomalies","type":"exact"},{"name":"regressive spondylometaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0018663","terms_by_termid":{"MONDO:0018663":null},"xrefs":{"Monarch":{"xref_id":"0018663"}}}


id: GO:0003146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the heart cone is displaced to the left with respect to the vector of the anterior-posterior axis.","definition_xrefs":["PMID:9334285","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"},{"relation_name":"part_of","term_name":"determination of heart left/right asymmetry","termid":"GO:0061371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart jogging","synonyms":[{"name":"cardiac jogging","type":"exact"}],"termid":"GO:0003146"}


id: PBO:0027719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation","termid":"PBO:0027719"}


id: PBO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R","termid":"PBO:0050442"}


id: MONDO:0009791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral sensibility, disturbance of","secondary_identifiers":["OMIM:258800","UMLS:C1850269","MEDGEN:376745"],"synonyms":[{"name":"disturbance of oral sensitivity","type":"related"},{"name":"impairment of oral perception","type":"related"},{"name":"oral sensibility, disturbance of","type":"exact"}],"termid":"MONDO:0009791","xrefs":{"Monarch":{"xref_id":"0009791"}}}


id: PBO:0078906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 15-1","termid":"PBO:0078906"}


id: PBO:0114489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; required for signal transduction during entry into meiosis; promotes the formation of the Ime1p-Ume6p complex by phosphorylating Ime1p and Ume6p; shares similarity with mammalian glycogen synthase kinase 3-beta; protein abundance increases in response to DNA replication stress; RIM11 has a paralog, MRK1, that arose from the whole genome duplication","termid":"PBO:0114489"}


id: MONDO:1010649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypereosinophilic syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome, non-human animal","termid":"MONDO:1010076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypereosinophilic syndrome, horse","secondary_identifiers":["OMIA:000502-9796"],"termid":"MONDO:1010649","xrefs":{"Monarch":{"xref_id":"1010649"}}}


id: PR:O74370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf12 gene.","definition_xrefs":["UniProtKB:O74370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.05c","synonyms":[{"name":"Spom972h-cwf12","type":"exact"},{"name":"complexed with cdc5 protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74370"}


id: GO:2001003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of pectin catabolic process","synonyms":[{"name":"regulation of pectin breakdown","type":"exact"},{"name":"regulation of pectin catabolism","type":"exact"},{"name":"regulation of pectin degradation","type":"exact"}],"termid":"GO:2001003"}


id: GO:0090578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase V.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase V transcription regulator complex","synonyms":[{"name":"RNA polymerase V transcription factor complex","type":"narrow"}],"termid":"GO:0090578"}


id: PBO:0064536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase mitochondrial pseudogene 1","termid":"PBO:0064536"}


id: FYECO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping condition combinations","termid":"FYECO:0000238"}


id: PR:O60165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn7 gene.","definition_xrefs":["UniProtKB:O60165","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.01c","synonyms":[{"name":"Spom972h-spn7","type":"exact"}],"termid":"PR:O60165"}


id: GO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-3-O-(beta-D-galactosyl)-sn-glycerol + 2 H2O = 3-beta-D-galactosyl-sn-glycerol + 2 a fatty acid + 2 H+.","definition_xrefs":["RHEA:13189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"galactolipase activity","secondary_identifiers":["EC:3.1.1.26","MetaCyc:GALACTOLIPASE-RXN"],"synonyms":[{"name":"1,2-diacyl-3-beta-D-galactosyl-sn-glycerol acylhydrolase activity","type":"related"},{"name":"galactolipid acylhydrolase activity","type":"related"},{"name":"galactolipid lipase activity","type":"related"},{"name":"polygalactolipase activity","type":"related"}],"termid":"GO:0047714"}


id: MONDO:1011878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, non-human animal","secondary_identifiers":["OMIA:001467"],"termid":"MONDO:1011878","xrefs":{"Monarch":{"xref_id":"1011878"}}}


id: MONDO:0016971
data:
  {"annotated_genes":["SJAG_03470","SJAG_03715","SJAG_01491","SJAG_04228","SJAG_04053","SJAG_03188","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[86144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"},{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87019,87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[86920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957270"}]},"cv_name":"mondo","definition":"Limb-girdle muscular dystrophy (LGMD) is a heterogeneous group of muscular dystrophies characterized by proximal weakness affecting the pelvic and shoulder girdles. Cardiac and respiratory impairment may be observed in certain forms of LGMD.","definition_xrefs":["Orphanet:263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_03470":null,"SJAG_03715":null,"SJAG_04053":null,"SJAG_04228":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"limb-girdle muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D049288","MEDGEN:151940","NANDO:2200858","DOID:11724","NCIT:C84828","SCTID:78468005","UMLS:C0686353","icd11.foundation:887807212","GARD:6907","NANDO:1200490"],"synonyms":[{"name":"LGMD","type":"exact"},{"name":"Leyden-Mbius muscular dystrophy","type":"exact"},{"name":"Leyden-Mobius muscular dystrophy","type":"exact"},{"name":"erb's muscular dystrophy","type":"exact"},{"name":"limb girdle muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy","type":"exact"}],"termid":"MONDO:0016971","terms_by_termid":{"MONDO:0012034":null,"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null,"MONDO:0021018":null,"MONDO:0957270":null},"xrefs":{"Monarch":{"xref_id":"0016971"}}}


id: PBO:0013113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ortholog of G4-Associated protein","termid":"PBO:0013113"}


id: GO:0018780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dichloroacetate + H2O = 2 HCl + glyoxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dichloroacetate halidohydrolase activity (obsolete GO:0018780)","termid":"GO:0018780"}


id: PBO:0083535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF VRP1/YLR337C","termid":"PBO:0083535"}


id: PBO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methyl_methanesulfonate","termid":"PBO:0031341"}


id: MONDO:0100192
data:
  {"annotated_genes":["SJAG_02015","SJAG_00358","SJAG_04956","SJAG_01166"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[86278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024568"},{"annotations":[85485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014659"},{"annotations":[87199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032844"}]},"cv_name":"mondo","definition":"A liver disease characterized by the liver losing or has lost all of its function.","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01166":null,"SJAG_02015":null,"SJAG_04956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:88444","NCIT:C26922","UMLS:C0085605","MESH:D017093"],"synonyms":[{"name":"hepatic failure","type":"exact"}],"termid":"MONDO:0100192","terms_by_termid":{"MONDO:0013111":null,"MONDO:0014659":null,"MONDO:0024568":null,"MONDO:0032844":null},"xrefs":{"Monarch":{"xref_id":"0100192"}}}


id: PBO:0027738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphatase_activity","termid":"PBO:0027738"}


id: GO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine metabolic process","termid":"GO:0045914"},{"relation_name":"negatively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine metabolic process","synonyms":[{"name":"down regulation of dopamine metabolic process","type":"exact"},{"name":"down-regulation of dopamine metabolic process","type":"exact"},{"name":"downregulation of dopamine metabolic process","type":"exact"},{"name":"inhibition of dopamine metabolic process","type":"narrow"},{"name":"negative regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0045963"}


id: PBO:0044106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member C1","termid":"PBO:0044106"}


id: MONDO:0006507
data:
  {"annotated_genes":["SJAG_02117"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder characterized by iron accumulation in the tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemosiderosis","termid":"MONDO:0001436"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02117":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hereditary hemochromatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:140272","MESH:D006432","ICD10CM:E83.110","NCIT:C84481","SCTID:35400008","UMLS:C0392514","DOID:2352","OMIMPS:235200","SCTID:399187006"],"synonyms":[{"name":"diabetes bronze","type":"exact"},{"name":"haemochromatosis","type":"broad"},{"name":"hemochromatosis","type":"broad"},{"name":"hemochromatosis, hereditary","type":"exact"},{"name":"iron storage disorder","type":"exact"}],"termid":"MONDO:0006507","terms_by_termid":{"MONDO:0011417":null},"xrefs":{"Monarch":{"xref_id":"0006507"}}}


id: PBO:0088241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S41","termid":"PBO:0088241"}


id: PBO:0005062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein, involved in localization to plasma membrane (predicted)","termid":"PBO:0005062"}


id: PBO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 30","termid":"PBO:0060010"}


id: PBO:0058293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4667","termid":"PBO:0058293"}


id: MONDO:0020331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Indolent systemic mastocytosis (ISM) is a benign form of systemic mastocytosis (SM) characterized by an abnormal proliferation of mast cells either only in bone marrow or in numerous tissues.","definition_xrefs":["Orphanet:98848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mastocytosis","termid":"MONDO:0016586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"indolent systemic mastocytosis","secondary_identifiers":["MedDRA:10056452","SCTID:70910003","UMLS:C0272203","ICDO:9741/1","MEDGEN:82897","ONCOTREE:ISM","NCIT:C9286","icd11.foundation:353283231","GARD:19595","DOID:4660"],"synonyms":[{"name":"ISM","type":"exact"},{"name":"indolent systemic mastocytosis (morphologic abnormality)","type":"exact"},{"name":"ism","type":"exact"}],"termid":"MONDO:0020331","xrefs":{"Monarch":{"xref_id":"0020331"}}}


id: GO:0075188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hyphopodium formation","synonyms":[{"name":"regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075188"}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["GOC:vw","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: PATO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal,","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepal-like","termid":"PATO:0002459"}


id: MONDO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute megakaryoblastic leukemia (obsolete MONDO:0004655)","termid":"MONDO:0004655","xrefs":{"Monarch":{"xref_id":"0004655"}}}


id: PBO:0038688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin beta","termid":"PBO:0038688"}


id: PBO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_methyltransferase_activity","termid":"PBO:0036153"}


id: PBO:0053864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1139","termid":"PBO:0053864"}


id: PBO:0003904
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by copper limitation","termid":"PBO:0003904"}


id: PBO:0082357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora kinase of chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in meiosis I, and kinetochore release from SPB clusters at meiotic exit; helps maintain condensed chromosomes during anaphase; required for SPB cohesion and prevention of multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; required for inhibition of karyopherin Pse1p upon SAC arrest","termid":"PBO:0082357"}


id: PBO:0058335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4709","termid":"PBO:0058335"}


id: PATO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal dimensions or measurements.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isometrical","termid":"PATO:0001573"}


id: MONDO:0012734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SERKAL (SEx Reversion, Kidneys, Adrenal and Lung dysgenesis) syndrome is characterized by female to male sex reversal and developmental anomalies of the kidneys, adrenal glands and lungs.","definition_xrefs":["Orphanet:139466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"SERKAL syndrome","secondary_identifiers":["OMIM:611812","NCIT:C123726","MESH:C567517","SCTID:723720008","MEDGEN:394528","GARD:10302","UMLS:C2678492"],"synonyms":[{"name":"46,XX SEX reversal with dysgenesis of kidneys, ADRENALS, and lungs","type":"related"},{"name":"46,XX Sex reversal with dysgenesis of kidneys Adrenals and lungs","type":"exact"},{"name":"SERKAL","type":"related"},{"name":"SERKAL syndrome","type":"exact"},{"name":"Sex reversion-kidneys, adrenal and lung dysgenesis syndrome","type":"exact"}],"termid":"MONDO:0012734","xrefs":{"Monarch":{"xref_id":"0012734"}}}


id: MONDO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 29","secondary_identifiers":["UMLS:C4748083","DOID:0112155","MEDGEN:1648318","OMIM:618077"],"synonyms":[{"name":"IBD29","type":"related"},{"name":"inflammatory bowel disease 29","type":"exact"}],"termid":"MONDO:0054849","xrefs":{"Monarch":{"xref_id":"0054849"}}}


id: PBO:0040254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 10","termid":"PBO:0040254"}


id: FYPO:0008372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is normal (i.e. indistinguishable from wild-type.","definition_xrefs":["PomBase:pb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cell surface during vegetative growth","termid":"FYPO:0008372"}


id: PBO:0039383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelotin","termid":"PBO:0039383"}


id: PBO:0005102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein (predicted)","termid":"PBO:0005102"}


id: GO:0140408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"},{"relation_name":"regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"}


id: PBO:0068388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 207","termid":"PBO:0068388"}


id: GO:0070453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of heme biosynthetic process","synonyms":[{"name":"regulation of haem biosynthesis","type":"exact"},{"name":"regulation of haem biosynthetic process","type":"exact"},{"name":"regulation of heme anabolism","type":"exact"},{"name":"regulation of heme biosynthesis","type":"exact"},{"name":"regulation of heme formation","type":"exact"},{"name":"regulation of heme synthesis","type":"exact"}],"termid":"GO:0070453"}


id: PBO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHHADH antisense RNA 1","termid":"PBO:0045982"}


id: GO:0000346
data:
  {"annotated_genes":["SJAG_04310","SJAG_01717","SJAG_04536","SJAG_05328","SJAG_04589","SJAG_04202","SJAG_00992","SJAG_04115"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90947,106587],"is_not":false,"summary":null,"term":"GO:0000346"},{"annotations":[119226,77033,102182,76330,111432,64462],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The transcription export (TREX) complex couples transcription elongation by RNA polymerase II to mRNA export. The complex associates with the polymerase and travels with it along the length of the transcribed gene. TREX is composed of the THO transcription elongation complex as well as other proteins that couple THO to mRNA export proteins. The TREX complex is known to be found in a wide range of eukaryotes, including S. cerevisiae and metazoans.","definition_xrefs":["GOC:krc","PMID:11979277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_01717":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"transcription export complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TREX complex","type":"exact"}],"termid":"GO:0000346","terms_by_termid":{"GO:0000346":null,"GO:0000445":null}}


id: MONDO:0008035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypoplasia, congenital universal, of Krabbe","secondary_identifiers":["MEDGEN:320398","MESH:C563553","OMIM:159100","UMLS:C1834651"],"synonyms":[{"name":"muscular hypoplasia, congenital universal, of Krabbe","type":"exact"}],"termid":"MONDO:0008035","xrefs":{"Monarch":{"xref_id":"0008035"}}}


id: PBO:0004417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution protein NUDC homolog","termid":"PBO:0004417"}


id: PBO:0028164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mycophenolic_acid","termid":"PBO:0028164"}


id: GO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal hypha.","definition_xrefs":["PMID:15976451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"hyphal tip","termid":"GO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"hyphal tip polarisome","termid":"GO:0031562"}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: GO:0033687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoblasts, resulting in the expansion of an osteoblast cell population. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast proliferation","termid":"GO:0033687"}


id: MONDO:0011777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 20p12.2-q11.21.","definition_xrefs":["PMID:9008509","DOID:0110041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 8","secondary_identifiers":["GARD:16512","MESH:C564622","OMIM:607116","MEDGEN:375956","UMLS:C1846735"],"synonyms":[{"name":"AD8","type":"exact"},{"name":"Ad8","type":"related"},{"name":"Alzheimer disease 8","type":"exact"},{"name":"Alzheimer disease type 8","type":"exact"},{"name":"Alzheimer disease, familial 8","type":"exact"},{"name":"Alzheimer disease, familial, 8","type":"related"},{"name":"Alzheimer's disease 8","type":"exact"},{"name":"Alzheimer's disease type 8","type":"exact"}],"termid":"MONDO:0011777","xrefs":{"Monarch":{"xref_id":"0011777"}}}


id: GO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response to antigenic stimulus","secondary_identifiers":["Reactome:R-HSA-9662834","Reactome:R-HSA-9664323","Reactome:R-HSA-9664535","Reactome:R-HSA-9660821"],"synonyms":[{"name":"down regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002862"}


id: GO:0039531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cytoplasmic pattern recognition receptor signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"regulation of MAV signaling","type":"narrow"},{"name":"regulation of cytosolic pattern recognition receptor signaling pathway","type":"exact"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"narrow"}],"termid":"GO:0039531"}


id: GO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit transport factor (obsolete GO:0005650)","synonyms":[{"name":"CAS","type":"related"},{"name":"importin, alpha-subunit transport factor","type":"exact"}],"termid":"GO:0005650"}


id: GO:0060861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of floral organ shedding, the controlled shedding of floral organs.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of floral organ abscission","termid":"GO:0060860"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of floral organ abscission","termid":"GO:0060861"}


id: GO:2001057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a reactive nitrogen species.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive nitrogen species metabolic process","synonyms":[{"name":"RNS metabolic process","type":"exact"},{"name":"RNS metabolism","type":"exact"},{"name":"reactive nitrogen species metabolism","type":"exact"}],"termid":"GO:2001057"}


id: GO:2000893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellotriose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellotriose metabolic process","synonyms":[{"name":"cellotriose metabolism","type":"exact"}],"termid":"GO:2000893"}


id: MONDO:0013408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic immunological disease reported in a single consanguineous Pakistani family with several affected members presenting with severe bacterial and viral infections, recurrent hepatopathy (portal inflammation, fibrosis), and recurrent, stereotypical febrile episodes, sometimes lasting several days, with encephalopathy and difficult-to-control seizures. Variable cardiac malformations were also reported. Although there were autoimmune lymphoproliferative syndrome (ALPS)-like biological features, clinical ALPS was not present. A homozygous missense mutation in the FADD gene (11q13.3) was found in the family and the disease is thought to follow an autosomal recessive pattern of inheritance.","definition_xrefs":["Orphanet:306550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"FADD-related immunodeficiency","secondary_identifiers":["OMIM:613759","MEDGEN:462412","icd11.foundation:440676168","SCTID:723334006","GARD:15004","NANDO:2200741","UMLS:C3151062"],"synonyms":[{"name":"FADD-related immunodeficiency","type":"exact"},{"name":"Fadd deficiency","type":"related"},{"name":"immunodeficiency 90 with encephalopathy, functional hyposplenia, and hepatic dysfunction","type":"exact"},{"name":"infections, recurrent, with encephalopathy, hepatic dysfunction, and cardiovascular malformations","type":"related"}],"termid":"MONDO:0013408","xrefs":{"Monarch":{"xref_id":"0013408"}}}


id: PBO:0086706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mCherry fusion protein localizes to the cytosol and nucleus","termid":"PBO:0086706"}


id: SO:0001899
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region which is part of the regional centromere outer repeat region.","definition_xrefs":["PMID:16407326","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh_repeat","synonyms":[{"name":"dh repeat","type":"exact"}],"termid":"SO:0001899"}


id: PATO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer touching another entity along a border or with a projecting part.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abut","termid":"PATO:0002435"}


id: GO:1902993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:24499793","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"positively_regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"activation of APP catabolic process","type":"narrow"},{"name":"activation of APP catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of APP catabolic process","type":"exact"},{"name":"positive regulation of APP catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of APP catabolic process","type":"exact"},{"name":"up regulation of APP catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of APP catabolic process","type":"exact"},{"name":"up-regulation of APP catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of APP catabolic process","type":"exact"},{"name":"upregulation of APP catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902993"}


id: MONDO:1012525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel-like hepatorenal fibrocystic dysplasia syndrome, non-human animal","termid":"MONDO:1011916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel-like hepatorenal fibrocystic dysplasia syndrome, sheep","secondary_identifiers":["OMIA:002176-9940"],"termid":"MONDO:1012525","xrefs":{"Monarch":{"xref_id":"1012525"}}}


id: GO:0042207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of styrene, an aromatic hydrocarbon liquid used in the manufacture of polystyrene.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"styrene metabolic process","termid":"GO:0018966"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"styrene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:sty"],"synonyms":[{"name":"styrene breakdown","type":"exact"},{"name":"styrene catabolism","type":"exact"},{"name":"styrene degradation","type":"exact"}],"termid":"GO:0042207"}


id: FYPO:0001356
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA 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id: MONDO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the arteries that is characterized by the presence of granulomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous angiitis","secondary_identifiers":["UMLS:C0018202","MESH:D020293","DOID:2555","MEDGEN:9088","NCIT:C34653"],"synonyms":[{"name":"Granulomatous arteritis","type":"exact"}],"termid":"MONDO:0002341","xrefs":{"Monarch":{"xref_id":"0002341"}}}


id: GO:0102509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanin betaine + H2O = cyanidin 3-O-beta-D-glucoside betaine + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3,5-diglucoside glucosidase activity (obsolete GO:0102509)","termid":"GO:0102509"}


id: PBO:0056955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19a","termid":"PBO:0056955"}


id: MONDO:0850349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astroblastoma that is characterized by astroblastoma-like morphology with MN1 rearrangements involving the meningioma 1 (MN1) gene on chromosome 22q.","definition_xrefs":["DOID:0080904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astroblastoma","termid":"MONDO:0016707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astroblastoma, MN1-altered","termid":"MONDO:0850349","xrefs":{"Monarch":{"xref_id":"0850349"}}}


id: PBO:0113165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine 5'-monophosphate (IMP)-specific 5'-nucleotidase; catalyzes the breakdown of IMP to inosine; responsible for production of nicotinamide riboside and nicotinic acid riboside; tetrameric form negatively regulated by inosine and ATP; expression positively regulated by nicotinic acid and glucose availability; does not show similarity to known 5'-nucleotidases from other organisms","termid":"PBO:0113165"}


id: RO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that is mediated in some way by the environment or environmental feature (ENVO:00002297)","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecologically_related_to","termid":"RO:0002321"}


id: PBO:0079062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 2-1","termid":"PBO:0079062"}


id: GO:0050623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-canadine + 2 NADP+ = berberine + H+ + 2 NADPH.","definition_xrefs":["RHEA:21268","EC:1.5.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"berberine reductase activity","secondary_identifiers":["KEGG_REACTION:R07169","MetaCyc:1.5.1.31-RXN"],"synonyms":[{"name":"(R)-canadine synthase activity","type":"related"},{"name":"(R)-tetrahydroberberine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050623"}


id: PBO:0053664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 841","termid":"PBO:0053664"}


id: GO:0072552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monoferuloyl di-(hydroxyferuloyl) spermidine + NADPH + O2 = tri-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072552"}


id: GO:0019100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a male organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"male sex determination","termid":"GO:0030238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line sex determination","termid":"GO:0019100"}


id: PBO:0047634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLT3 interacting zinc finger 1","termid":"PBO:0047634"}


id: PBO:0058646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6775","termid":"PBO:0058646"}


id: GO:0098543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from another organism is received and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of other organism","secondary_identifiers":["GO:0051824"],"synonyms":[{"name":"recognition of other organism during symbiotic interaction","type":"narrow"},{"name":"recognition of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0098543"}


id: PBO:0083874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein subunit of SCF ubiquitin ligase complex; substrate-specific adaptor subunit that recruits substrates to a core ubiquitination complex","termid":"PBO:0083874"}


id: PBO:0074067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 42","termid":"PBO:0074067"}


id: GO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signaling process that monitors and signals errors in the placement or orientation of the spindle in the cell. This delays the completion of anaphase until errors are corrected.","definition_xrefs":["PMID:14616062","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exit from mitosis","termid":"GO:0001100"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle orientation checkpoint signaling","secondary_identifiers":["GO:0072483"],"synonyms":[{"name":"SOC","type":"exact"},{"name":"SPOC","type":"exact"},{"name":"mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"mitotic spindle orientation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"spindle position checkpoint","type":"exact"}],"termid":"GO:0031578"}


id: PBO:0109510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGLU1 divergent transcript","termid":"PBO:0109510"}


id: GO:0071290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platinum stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to platinum ion","termid":"GO:0070541"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to platinum ion","synonyms":[{"name":"cellular response to platinum","type":"exact"}],"termid":"GO:0071290"}


id: PBO:0027945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_fragmented_septum_and_more_than_four_nuclei","termid":"PBO:0027945"}


id: GO:0102326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate + H2O = 2,3-dihydroxybenzoate + 2-oxopent-4-enoate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate hydrolase activity (obsolete GO:0102326)","termid":"GO:0102326"}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["RHEA:16145","MetaCyc:1.14.18.2-RXN"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: PBO:0055898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 19","termid":"PBO:0055898"}


id: PBO:0055211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2636","termid":"PBO:0055211"}


id: MONDO:0016244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic thrombotic microangiopathy due to dysregulation of the alternative complement pathway and characterized by the triad of hemolytic anemia, thrombocytopenia, and acute renal dysfunction.","definition_xrefs":["Orphanet:2134"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"},{"relation_name":"is_a","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"hereditary hemolytic uremic syndrome","termid":"MONDO:0957097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome","secondary_identifiers":["UMLS:C2931788","DOID:0080301","GARD:8702","NANDO:2200131","NANDO:1200474","NORD:822","NANDO:1200473","MEDGEN:444141","NANDO:2200641","MESH:D065766","NCIT:C123223"],"synonyms":[{"name":"Atypical Hemolytic Uremic Syndrome","type":"exact"},{"name":"D-HUS","type":"exact"},{"name":"D-minus hemolytic uremic syndrome (D-HUS)","type":"related"},{"name":"HUS, atypical","type":"related"},{"name":"aHUS","type":"exact"},{"name":"atypical HUS","type":"exact"},{"name":"atypical hemolytic uremic syndrome","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea","type":"exact"},{"name":"non-diarrhea-associated hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0016244","xrefs":{"Monarch":{"xref_id":"0016244"}}}


id: GO:0030863
data:
  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portion of the cytoskeleton that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cell 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id: SO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a tasiRNA.","definition_xrefs":["PMID:16145017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tasiRNA_primary_transcript","synonyms":[{"name":"tasiRNA primary transcript","type":"exact"}],"termid":"SO:0001801"}


id: MONDO:0020114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polycythemia (obsolete MONDO:0020114)","termid":"MONDO:0020114","xrefs":{"Monarch":{"xref_id":"0020114"}}}


id: MONDO:0008242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photomyoclonus, diabetes mellitus, deafness, nephropathy, and cerebral dysfunction","secondary_identifiers":["SCTID:237612000","OMIM:172500","ICD9:583.9","MEDGEN:315660","MESH:C538113","UMLS:C1809475"],"synonyms":[{"name":"Herrmann syndrome","type":"related"},{"name":"hereditary photomyoclonus associated with diabetes mellitus, deafness, nephropathy, and cerebral dysfunction","type":"related"},{"name":"photomyoclonus, diabetes mellitus, deafness, nephropathy, and cerebral dysfunction","type":"exact"}],"termid":"MONDO:0008242","xrefs":{"Monarch":{"xref_id":"0008242"}}}


id: MONDO:1012903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in pigs due to a mutation in the SOX10 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, SOX10-related, pig","secondary_identifiers":["OMIA:002453-9823"],"termid":"MONDO:1012903","xrefs":{"Monarch":{"xref_id":"1012903"}}}


id: MONDO:0014581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal dominant inheritance of postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and prolonged opening and activity of the acetylcholine receptor channel that has material basis in heterozygous mutation in the CHRNB1 gene on chromosome 17p13.","definition_xrefs":["DOID:0110681","PMID:8872460","PMID:25792100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 2A","secondary_identifiers":["GARD:9895","OMIM:616313","UMLS:C4225374","MEDGEN:908185"],"synonyms":[{"name":"CMS IIa","type":"related"},{"name":"CMS2A","type":"exact"},{"name":"SCCMS","type":"related"},{"name":"congenital myasthenic syndrome 2A slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 2A","type":"exact"},{"name":"myasthenic syndrome, congenital, 2A, slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, postsynaptic slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, type IIa","type":"related"},{"name":"slow channel congenital myasthenic syndrome","type":"related"}],"termid":"MONDO:0014581","xrefs":{"Monarch":{"xref_id":"0014581"}}}


id: GO:0140740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = ADP-riboxanated L-argininyl-[protein] + H+ + NH4(+) + nicotinamide.","definition_xrefs":["RHEA:69500","PMID:34671164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"},{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ADP-riboxanase activity","termid":"GO:0140740"}


id: PBO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectable marker","termid":"PBO:0000431"}


id: PBO:0070392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor tyrosine kinase like orphan receptor 2","termid":"PBO:0070392"}


id: PBO:0017659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp36 (predicted)","termid":"PBO:0017659"}


id: PBO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain containing 1","termid":"PBO:0048454"}


id: PR:Q10408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.03","synonyms":[{"name":"Spom972h-sro7","type":"exact"}],"termid":"PR:Q10408"}


id: GO:0071452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a singlet oxygen stimulus. Singlet oxygen is a dioxygen (O2) molecule in which two 2p electrons have similar spin. Singlet oxygen is more highly reactive than the form in which these electrons are of opposite spin, and it is produced in mutant chloroplasts lacking carotenoids and by leukocytes during metabolic burst.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to singlet oxygen","termid":"GO:0000304"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to singlet oxygen","termid":"GO:0071452"}


id: PBO:0091481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png3","termid":"PBO:0091481"}


id: PBO:0079141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 4","termid":"PBO:0079141"}


id: MONDO:0970959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of conus region spinal cord lipoma characterized by its location where the interface between the lipoma and the spinal cord is strictcly above the level of the tip of the conus. The tip of the conus is readily delineated.","definition_xrefs":["Orphanet:645294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramedullary conus spinal cord lipoma","termid":"MONDO:0968987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"posterior extramedullary conus spinal cord lipoma","secondary_identifiers":["UMLS:C5816725","MEDGEN:1853127"],"termid":"MONDO:0970959","xrefs":{"Monarch":{"xref_id":"0970959"}}}


id: MONDO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A varicose disease that involves the pelvic region of trunk.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"varicose disease","termid":"MONDO:0008638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic varices","secondary_identifiers":["ICD10CM:I86.2","icd11.foundation:1717989511","UMLS:C0155795","MEDGEN:510082","DOID:9742","ICD9:456.5","SCTID:17406005"],"synonyms":[{"name":"pelvic region of trunk varicose disease","type":"exact"},{"name":"varicose disease of pelvic region of trunk","type":"exact"}],"termid":"MONDO:0004869","xrefs":{"Monarch":{"xref_id":"0004869"}}}


id: PBO:0073640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 27, pseudogene","termid":"PBO:0073640"}


id: SO:0001727
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_monomethylation_site","synonyms":[{"name":"H3K9 mono-methylation site","type":"exact"},{"name":"H3K9Me1","type":"related"}],"termid":"SO:0001727"}


id: PBO:0030587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_valine_level","termid":"PBO:0030587"}


id: PBO:0088922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm1","termid":"PBO:0088922"}


id: GO:0051654
data:
  {"annotated_genes":["SJAG_00368","SJAG_02848","SJAG_03416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70319,106907],"is_not":false,"summary":null,"term":"GO:0051654"},{"annotations":[103080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"}]},"cv_name":"biological_process","definition":"The directed movement of the mitochondrion to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion localization","termid":"GO:0051646"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_02848":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of mitochondrion localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of mitochondria localization","type":"exact"},{"name":"establishment of mitochondrion localisation","type":"exact"},{"name":"mitochondria positioning","type":"exact"},{"name":"mitochondrial migration","type":"exact"},{"name":"mitochondrion positioning","type":"exact"}],"termid":"GO:0051654","terms_by_termid":{"GO:0034643":null,"GO:0051654":null}}


id: PBO:0086657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has some characteristics of a transcriptional activator; may be a target of Dbf2p-Mob1p kinase; GFP-fusion protein co-localizes with clathrin-coated vesicles; YML037C is not an essential gene","termid":"PBO:0086657"}


id: PBO:0075657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, non-erythrocytic 1","termid":"PBO:0075657"}


id: PBO:0091511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton exporting ATPase, P3-type Pma1","termid":"PBO:0091511"}


id: PBO:0061188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Ser (TGA) 3-1","termid":"PBO:0061188"}


id: GO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dAMP metabolic process","termid":"GO:0046053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dAMP biosynthetic process","synonyms":[{"name":"dAMP anabolism","type":"exact"},{"name":"dAMP biosynthesis","type":"exact"},{"name":"dAMP formation","type":"exact"},{"name":"dAMP synthesis","type":"exact"}],"termid":"GO:0006170"}


id: GO:0015805
data:
  {"annotated_genes":["SJAG_01589","SJAG_01890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88608,102924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"}]},"cv_name":"biological_process","definition":"The directed movement of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"S-adenosyl-L-methionine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"S-adenosyl methionine transport","type":"exact"},{"name":"S-adenosylmethionine transport","type":"exact"},{"name":"SAM transport","type":"exact"}],"termid":"GO:0015805","terms_by_termid":{"GO:1990543":null}}


id: MONDO:0017220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 0 is a congenital respiratory tract anomaly characterized by a submucosal laryngo-tracheo-esophageal cleft with minor symptoms or an asymptomatic course.","definition_xrefs":["Orphanet:280205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 0","secondary_identifiers":["MEDGEN:1760178","UMLS:C5438977","GARD:21072"],"synonyms":[{"name":"LTEC0","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 0","type":"exact"}],"termid":"MONDO:0017220","xrefs":{"Monarch":{"xref_id":"0017220"}}}


id: PBO:0091463
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ell Binding Protein","termid":"PBO:0091463"}


id: PBO:0070583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 49","termid":"PBO:0070583"}


id: PBO:0018129
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methemoglobinemia","termid":"PBO:0018129"}


id: PBO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates obr1","termid":"PBO:0001414"}


id: PR:Q10171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uch1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Uch1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.03c","synonyms":[{"name":"SPAC27F1.03c","type":"related"},{"name":"Spom972h-uch1","type":"exact"},{"name":"ubiquitin carboxyl-terminal hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"related"}],"termid":"PR:Q10171"}


id: MONDO:0017315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-webbed neck-heart disease syndrome is characterized by short stature, intellectual deficit, facial dysmorphism, short webbed neck, skin changes and congenital heart defects. It has been reported in four Arab Bedouin sibs born to consanguineous parents.","definition_xrefs":["Orphanet:2865"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-webbed neck-heart disease syndrome","secondary_identifiers":["SCTID:721073008","MEDGEN:419677","UMLS:C2930950","GARD:583","MESH:C535613"],"synonyms":[{"name":"Al Gazali Aziz Salem syndrome","type":"related"},{"name":"Al Gazali-Aziz-Salem syndrome","type":"exact"},{"name":"short stature, intellectual disability, facial dysmorphism, short webbed neck, skin changes and congenital heart disease","type":"related"},{"name":"short stature, webbed neck, heart disease","type":"related"}],"termid":"MONDO:0017315","xrefs":{"Monarch":{"xref_id":"0017315"}}}


id: PBO:0063692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-glucosylgalactosylhydroxylysine glucosidase","termid":"PBO:0063692"}


id: SO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby an arm exists as an individual chromosome element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_chromosome_arm","synonyms":[{"name":"free chromosome arm","type":"exact"}],"termid":"SO:0000065"}


id: GO:1990684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein, lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["PMID:21423178","PMID:22028337","GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-lipid-RNA complex","synonyms":[{"name":"miRNA-lipoprotein complex","type":"related"}],"termid":"GO:1990684"}


id: PBO:0069568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 840, pseudogene","termid":"PBO:0069568"}


id: PBO:0080538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP like actin nucleation promoting factor","termid":"PBO:0080538"}


id: PBO:0041957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle and apoptosis regulator 1","termid":"PBO:0041957"}


id: GO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte costimulation","termid":"GO:0031294"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"T cell costimulation","secondary_identifiers":["Reactome:R-HSA-388841"],"synonyms":[{"name":"T cell co-stimulation","type":"exact"},{"name":"T lymphocyte costimulation","type":"exact"},{"name":"T-cell co-stimulation","type":"exact"},{"name":"T-cell costimulation","type":"exact"},{"name":"T-lymphocyte costimulation","type":"exact"}],"termid":"GO:0031295"}


id: PBO:0063805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit beta","termid":"PBO:0063805"}


id: PBO:0040118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 5","termid":"PBO:0040118"}


id: PBO:0084244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner nuclear membrane protein; highly enriched at telomeres and subtelomeric regions; functions in regulation of subtelomeric genes and is linked to TREX (transcription export) factors; SRC1 produces 2 splice variant proteins with different functions; alternative splicing of SRC1 pre-mRNA is promoted by Hub1p; mutant has aneuploidy tolerance; SRC1 has a paralog, HEH2, that arose from the whole genome duplication","termid":"PBO:0084244"}


id: MONDO:1030009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An atrial fibrillation disorder characterized by continuous atrial fibrillation that lasts for more than seven days.","definition_xrefs":["PMID:38033089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial fibrillation","termid":"MONDO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"persistent atrial fibrillation","secondary_identifiers":["ICD10CM:I48.1","MEDGEN:749907","SCTID:440059007","UMLS:C2585653","MESH:D001281"],"synonyms":[{"name":"persistent AF","type":"exact"}],"termid":"MONDO:1030009","xrefs":{"Monarch":{"xref_id":"1030009"}}}


id: GO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pm","GOC:jl","PMID:22022213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty acid import into cell","synonyms":[{"name":"long-chain fatty acid import","type":"related"},{"name":"long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0044539"}


id: MONDO:0034987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intraductal tubulopapillary neoplasm of pancreas","secondary_identifiers":["Orphanet:580572","GARD:22331","UMLS:C2987189","MEDGEN:459415","NCIT:C95506"],"termid":"MONDO:0034987","xrefs":{"Monarch":{"xref_id":"0034987"}}}


id: PBO:0039664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit beta 2","termid":"PBO:0039664"}


id: GO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"positively_regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotransmitter uptake","synonyms":[{"name":"activation of neurotransmitter uptake","type":"narrow"},{"name":"positive regulation of neurotransmitter import","type":"exact"},{"name":"stimulation of neurotransmitter uptake","type":"narrow"},{"name":"up regulation of neurotransmitter uptake","type":"exact"},{"name":"up-regulation of neurotransmitter uptake","type":"exact"},{"name":"upregulation of neurotransmitter uptake","type":"exact"}],"termid":"GO:0051582"}


id: MONDO:0010799
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85385,87614],"is_not":false,"summary":null,"term":"MONDO:0010799"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"deafness, aminoglycoside-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111734","OMIM:580000","MESH:C564013","GARD:18161","Orphanet:168609","UMLS:C1838854","MEDGEN:374074"],"synonyms":[{"name":"aminoglycoside-induced deafness","type":"exact"},{"name":"aminoglycoside-induced hearing loss","type":"broad"},{"name":"deafness, aminoglycoside-induced","type":"exact"},{"name":"deafness, mitochondrial, modifier of, mitochondrial","type":"exact"},{"name":"deafness, streptomycin-induced","type":"exact"},{"name":"mitochondrial isolated neurosensory deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial isolated neurosensory hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial isolated sensorineural deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial isolated sensorineural hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial non-syndromic neurosensory deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial non-syndromic neurosensory hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial non-syndromic sensorineural deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial non-syndromic sensorineural hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"streptomycin ototoxicity","type":"exact"}],"termid":"MONDO:0010799","terms_by_termid":{"MONDO:0010799":null},"xrefs":{"Monarch":{"xref_id":"0010799"}}}


id: FYPO:0007195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondria are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"large mitochondria","synonyms":[{"name":"enlarged mitochondria","type":"exact"},{"name":"large mitochondria during mitotic cell cycle","type":"related"},{"name":"large mitochondria during vegetative growth","type":"exact"}],"termid":"FYPO:0007195"}


id: PBO:0009498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA hydrolase (predicted)","termid":"PBO:0009498"}


id: PBO:0068191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 498","termid":"PBO:0068191"}


id: PBO:0043529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordon-bleu WH2 repeat protein","termid":"PBO:0043529"}


id: MONDO:0015893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of hypothyroidism that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare hypothyroidism (obsolete MONDO:0015893)","secondary_identifiers":["Orphanet:181396"],"synonyms":[{"name":"rare hypothyroidism","type":"exact"}],"termid":"MONDO:0015893","xrefs":{"Monarch":{"xref_id":"0015893"}}}


id: GO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating noradrenaline","type":"related"},{"name":"increased force of heart contraction by circulating norepinephrine","type":"exact"}],"termid":"GO:0003109"}


id: GO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate biosynthetic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate biosynthesis","type":"exact"},{"name":"dihydrosphingosine-1-phosphate biosynthetic process","type":"exact"},{"name":"sphinganine-1-phosphate anabolism","type":"exact"},{"name":"sphinganine-1-phosphate biosynthesis","type":"exact"},{"name":"sphinganine-1-phosphate formation","type":"exact"},{"name":"sphinganine-1-phosphate synthesis","type":"exact"}],"termid":"GO:0006669"}


id: GO:0032047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A double-membrane-bounded organelle that functions in iron-sulfur protein maturation; evolutionarily derived from mitochondria. The mitosome has been detected only in anaerobic or microaerophilic organisms that do not have mitochondria, such as Entamoeba histolytica, Giardia intestinalis and several species of Microsporidia. These organisms are not capable of gaining energy from oxidative phosphorylation, which is normally performed by mitochondria.","definition_xrefs":["PMID:10361303","PMID:24316280","GOC:giardia","PMID:14614504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitosome","secondary_identifiers":["Wikipedia:Mitosome"],"synonyms":[{"name":"crypton","type":"exact"}],"termid":"GO:0032047"}


id: PBO:0066989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 292","termid":"PBO:0066989"}


id: PBO:0045442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L4 pseudogene 2","termid":"PBO:0045442"}


id: GO:0045560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor biosynthetic process (obsolete GO:0045560)","synonyms":[{"name":"regulation of TRAIL receptor anabolism","type":"exact"},{"name":"regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor formation","type":"exact"},{"name":"regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045560"}


id: PBO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 20","termid":"PBO:0050318"}


id: GO:0004754
data:
  {"annotated_genes":["SJAG_02388"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57417],"is_not":false,"summary":null,"term":"GO:0004754"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NAD+ = 2-oxoglutarate + L-lysine + H+ + NADH.","definition_xrefs":["EC:1.5.1.7","RHEA:12440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NAD+, L-lysine-forming) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R00715","MetaCyc:1.5.1.7-RXN"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NAD+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NAD+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"N6-(glutar-2-yl)-L-lysine:NAD oxidoreductase (L-lysine-forming)","type":"related"},{"name":"dehydrogenase, saccharopine (nicotinamide adenine dinucleotide, lysine forming)","type":"related"},{"name":"epsilon-N-(L-glutaryl-2)-L-lysine:NAD oxidoreductase (L-lysine forming)","type":"related"}],"termid":"GO:0004754","terms_by_termid":{"GO:0004754":null}}


id: PBO:0066214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 7","termid":"PBO:0066214"}


id: GO:0038147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-X-C motif chemokine 12 (CXCL12) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","PMID:22204316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-X-C motif chemokine 12 receptor activity","synonyms":[{"name":"CXCL12 receptor activity","type":"exact"},{"name":"CXCR4","type":"narrow"},{"name":"CXCR7","type":"narrow"},{"name":"SDF-1 receptor activity","type":"related"},{"name":"stromal cell-derived factor-1 receptor activity","type":"exact"}],"termid":"GO:0038147"}


id: MONDO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete locked-in syndrome (obsolete MONDO:0001570)","termid":"MONDO:0001570","xrefs":{"Monarch":{"xref_id":"0001570"}}}


id: GO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thromboxane A2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thromboxane A2 receptor binding","synonyms":[{"name":"prostanoid TP receptor binding","type":"exact"},{"name":"thromboxane A2 receptor ligand","type":"narrow"}],"termid":"GO:0031870"}


id: GO:0021536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.","definition_xrefs":["ISBN:0838580343","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diencephalon development","termid":"GO:0021536"}


id: GO:0034280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-sandaracopimara-8(14),15-diene + diphosphate.","definition_xrefs":["RHEA:25536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ent-sandaracopimaradiene synthase activity","secondary_identifiers":["EC:4.2.3.29","KEGG_REACTION:R09120","MetaCyc:RXN-4884"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase [ent-sandaracopimara-8(14),15-diene-forming] activity","type":"exact"},{"name":"ent-pimaradiene synthase activity","type":"broad"}],"termid":"GO:0034280"}


id: PBO:0046142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5B","termid":"PBO:0046142"}


id: GO:0018886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon tetrachloride metabolic process","termid":"GO:0018885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic carbon tetrachloride metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ctc"],"synonyms":[{"name":"anaerobic carbon tetrachloride metabolism","type":"exact"}],"termid":"GO:0018886"}


id: PBO:0086347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PtdIns-3-P binding protein that tethers the ER to vacuoles at NVJs; anchored in the ER membrane at nucleus-vacuole junctions and binds phosphatidylinositol 3-phosphate (PtdIns-3-P) in the vacuolar membrane via its Phox homology (PX) domain; expressed predominantly in late G1 to early S phase of the cell cycle; mutation affects nuclear and mitochondrial transmission to daughter buds; similar to 4 human genes, one of which (SNX14) is associated with neurological disease","termid":"PBO:0086347"}


id: FYPO:0008297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosta- 5,7,24(28)-trienol  measured in a cell is higher than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular ergosta-5,7,24(28)-trienol level","termid":"FYPO:0008297"}


id: GO:0031327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular biosynthetic process (obsolete GO:0031327)","synonyms":[{"name":"down regulation of cellular biosynthetic process","type":"exact"},{"name":"down-regulation of cellular biosynthetic process","type":"exact"},{"name":"downregulation of cellular biosynthetic process","type":"exact"},{"name":"inhibition of cellular biosynthetic process","type":"narrow"},{"name":"negative regulation of cellular anabolism","type":"exact"},{"name":"negative regulation of cellular biosynthesis","type":"exact"},{"name":"negative regulation of cellular formation","type":"exact"},{"name":"negative regulation of cellular synthesis","type":"exact"}],"termid":"GO:0031327"}


id: FYPO:0000383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of macroautophagy","synonyms":[{"name":"autophagy: delayed","type":"broad"},{"name":"delayed macroautophagy","type":"exact"},{"name":"delayed onset of autophagy","type":"broad"}],"termid":"FYPO:0000383"}


id: GO:0009048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by heterochromatin formation leading to a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex.","definition_xrefs":["GOC:mr","GOC:jl","GOC:pr","PMID:11498577","PMID:20622855","Wikipedia:XY_sex-determination_system"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"},{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"dosage compensation by inactivation of X chromosome","secondary_identifiers":["Wikipedia:X-inactivation"],"synonyms":[{"name":"Barr body formation","type":"related"},{"name":"X chromosome inactivation","type":"exact"},{"name":"chromosome inactivation","type":"broad"}],"termid":"GO:0009048"}


id: PBO:0065322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 45, pseudogene","termid":"PBO:0065322"}


id: GO:0061284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric proximal tubule identity","termid":"GO:0061284"}


id: PBO:0061602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor, mitochondrial","termid":"PBO:0061602"}


id: MONDO:0020079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete plasma cell tumor (obsolete MONDO:0020079)","termid":"MONDO:0020079","xrefs":{"Monarch":{"xref_id":"0020079"}}}


id: PBO:0067449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 571, pseudogene","termid":"PBO:0067449"}


id: MOD:00066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-formylglycine.","definition_xrefs":["RESID:AA0057","PubMed:5139483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formylglycine","synonyms":[{"name":"(formylamino)acetic acid","type":"exact"},{"name":"(formylamino)ethanoic acid","type":"exact"},{"name":"(formylazanyl)ethanoic acid","type":"exact"},{"name":"2-formamidoacetic acid","type":"exact"},{"name":"2-formamidoethanoic acid","type":"exact"},{"name":"MOD_RES N-formylglycine","type":"exact"},{"name":"N(alpha)-formylglycine","type":"exact"},{"name":"N-formylated glycine","type":"exact"},{"name":"N-formylglycine","type":"exact"},{"name":"NFoGly","type":"exact"}],"termid":"MOD:00066"}


id: GO:0030559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of pseudouridylation in an rRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification guide activity","termid":"GO:0030556"},{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"rRNA pseudouridylation guide activity","termid":"GO:0030559"}


id: PBO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0032724"}


id: GO:0035916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism effects a change in the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["GOC:bf","PMID:20920515","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of calcium channel activity in another organism (obsolete GO:0035916)","synonyms":[{"name":"modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035916"}


id: GO:1905948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + 3',5'-cyclic GMP(in) = ADP + phosphate + 3',5'-cyclic GMP(out).","definition_xrefs":["GO_REF:0000070","GOC:TermGenie","PMID:18310115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type 3',5'-cyclic GMP transmembrane transporter activity","secondary_identifiers":["RHEA:66188"],"synonyms":[{"name":"3',5'-cyclic GMP transmembrane-transporting ATPase activity","type":"exact"},{"name":"ATP-dependent 3',5'-cyclic GMP transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled 3',5'-cyclic GMP transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cGMP transmembrane transporter activity","type":"exact"}],"termid":"GO:1905948"}


id: MONDO:1010984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, dog","secondary_identifiers":["OMIA:000487-9615"],"termid":"MONDO:1010984","xrefs":{"Monarch":{"xref_id":"1010984"}}}


id: MONDO:0006345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial fibromatosis arising from the soft tissue of the palm. It is characterized by the presence of spindle-shaped fibroblasts, and an infiltrative growth pattern. It predominantly affects adult males.","definition_xrefs":["NCIT:C3469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmar fibromatosis","secondary_identifiers":["SCTID:274142002","HP:0005679","EFO:1000438","MEDGEN:903450","UMLS:C4085370","MESH:D004387","SCTID:203045001"],"synonyms":[{"name":"Dupuytren contracture","type":"exact"},{"name":"Dupuytren contracture (disease)","type":"exact"},{"name":"Dupuytren's contracture","type":"related"},{"name":"palmar fibromatosis","type":"exact"},{"name":"palmar part of manus fibromatosis","type":"exact"}],"termid":"MONDO:0006345","xrefs":{"Monarch":{"xref_id":"0006345"}}}


id: PBO:0050763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 25","termid":"PBO:0050763"}


id: PBO:0090933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm1-7 complex subunit Lsm1","termid":"PBO:0090933"}


id: PBO:0080077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 39","termid":"PBO:0080077"}


id: PBO:0059842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 2","termid":"PBO:0059842"}


id: PBO:0091436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091436"}


id: _global:capable_of_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","secondary_identifiers":["RO:0002216"],"termid":"_global:capable_of_part_of"}


id: GO:0010750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric oxide mediated signal transduction","termid":"GO:0010749"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"positive regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010750"}


id: GO:0034451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; centriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome.","definition_xrefs":["GOC:BHF","PMID:10579718","PMID:12403812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centriolar satellite","termid":"GO:0034451"}


id: GO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indolepyruvate = CO2 + indole acetaldehyde.","definition_xrefs":["EC:4.1.1.74","MetaCyc:4.1.1.74-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"indolepyruvate decarboxylase activity","secondary_identifiers":["RHEA:18017"],"synonyms":[{"name":"3-(indol-3-yl)pyruvate carboxy-lyase [(2-indol-3-yl)acetaldehyde-forming]","type":"related"},{"name":"3-(indol-3-yl)pyruvate carboxy-lyase activity","type":"related"},{"name":"indol-3-yl-pyruvate carboxy-lyase activity","type":"related"},{"name":"indole-3-pyruvate decarboxylase activity","type":"related"}],"termid":"GO:0047434"}


id: MONDO:0015737
data:
  {"annotated_genes":["SJAG_03025","SJAG_03379","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[87076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","definition":"Typical nemaline myopathy is a moderate neonatal form of nemaline myopathy (NM) characterized by facial and skeletal muscle weakness and mild respiratory involvement.","definition_xrefs":["Orphanet:171436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03145":null,"SJAG_03379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"typical nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12822","MEDGEN:1806265","icd11.foundation:1105111633","UMLS:C5680453"],"synonyms":[{"name":"typical congenital nemaline myopathy","type":"related"}],"termid":"MONDO:0015737","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012538":null},"xrefs":{"Monarch":{"xref_id":"0015737"}}}


id: PBO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 3","termid":"PBO:0052711"}


id: MONDO:1011062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute-onset renal failure from deposition of oxalate crystals in renal tubules that occurs in cats due to a mutation in the GRHPR gene.","definition_xrefs":["OMIA:000821-9685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nephropathy, non-human animal","termid":"MONDO:1011907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hyperoxaluria, GRHPR-related, domestic cat","synonyms":[{"name":"primary hyperoxaluria type II (Oxalosis II), domestic cat","type":"related"}],"termid":"MONDO:1011062","xrefs":{"Monarch":{"xref_id":"1011062"}}}


id: PBO:0066804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 103","termid":"PBO:0066804"}


id: GO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell differentiation","synonyms":[{"name":"down regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"down-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"downregulation of gamma-delta T cell differentiation","type":"exact"},{"name":"inhibition of gamma-delta T cell differentiation","type":"narrow"},{"name":"negative regulation of gamma-delta T cell development","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045587"}


id: MONDO:0020775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation with defective fucosylation","termid":"MONDO:0060720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation with defective fucosylation 1","secondary_identifiers":["OMIM:618005"],"synonyms":[{"name":"CDGF1","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION WITH DEFECTIVE FUCOSYLATION 1","type":"related"},{"name":"Cdgf","type":"related"}],"termid":"MONDO:0020775","xrefs":{"Monarch":{"xref_id":"0020775"}}}


id: PBO:0066646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 4","termid":"PBO:0066646"}


id: GO:1900266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of substance P receptor binding (obsolete GO:1900266)","synonyms":[{"name":"down regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down regulation of substance P receptor binding","type":"exact"},{"name":"down regulation of substance P receptor ligand","type":"narrow"},{"name":"down-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor ligand","type":"narrow"},{"name":"downregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"downregulation of substance P receptor binding","type":"exact"},{"name":"downregulation of substance P receptor ligand","type":"narrow"},{"name":"inhibition of neurokinin-1 receptor binding","type":"exact"},{"name":"inhibition of substance P receptor binding","type":"narrow"},{"name":"inhibition of substance P receptor ligand","type":"narrow"},{"name":"negative regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"negative regulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900266"}


id: FYPO:0000339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in an abnormal location. The normal location is at the midpoint of the long axis of the cell. The site of septum assembly is normally determined by the location of the actomyosin contractile ring.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring localization","termid":"FYPO:0000033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized septum during vegetative growth","secondary_identifiers":["FYPO:0002154"],"synonyms":[{"name":"abnormal contractile ring localization resulting in abnormal septum site selection","type":"related"},{"name":"abnormal contractile ring localization resulting in mislocalized septum","type":"related"},{"name":"abnormal division septum site selection","type":"related"},{"name":"abnormal septum localization during vegetative growth","type":"related"},{"name":"abnormal septum location during vegetative growth","type":"exact"},{"name":"abnormal septum position during vegetative growth","type":"exact"},{"name":"abnormal septum positioning during vegetative growth","type":"related"},{"name":"abnormal septum postitioning","type":"exact"},{"name":"abnormal septum site selection","type":"related"},{"name":"abnormal septum site selection during mitotic cell cycle","type":"related"},{"name":"abnormal septum site selection during vegetative growth","type":"related"},{"name":"asymmetric septum during vegetative growth","type":"exact"},{"name":"asymmetrically located septum during vegetative growth","type":"exact"},{"name":"mislocalised septum during vegetative growth","type":"exact"},{"name":"mislocalized septum during mitotic cell cycle","type":"related"},{"name":"misplaced septum during vegetative growth","type":"exact"},{"name":"septum site selection defects","type":"related"}],"termid":"FYPO:0000339"}


id: PBO:0091389
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteolysis factor that Quiescence Requires","termid":"PBO:0091389"}


id: PBO:0025511
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 oxidoreductase deficiency","termid":"PBO:0025511"}


id: PBO:0057838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3154","termid":"PBO:0057838"}


id: PBO:0048666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 1","termid":"PBO:0048666"}


id: PBO:0087245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich protein of unknown function; predicted to be palmitoylated; overproduction suppresses growth inhibition caused by exposure to immunosuppressant leflunomide; MLF3 has a paralog, VHS2, that arose from the whole genome duplication","termid":"PBO:0087245"}


id: GO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phycoerythrobilin to phycoerythrin via phycoerythrobilin-bis-L-cysteine.","definition_xrefs":["RESID:AA0259"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phycoerythrobilin linkage via phycoerythrobilin-bis-L-cysteine (obsolete GO:0018167)","termid":"GO:0018167"}


id: GO:0043022
data:
  {"annotated_genes":["SJAG_01249","SJAG_04874","SJAG_01438","SJAG_02856","SJAG_00231","SJAG_00188","SJAG_04635","SJAG_03548","SJAG_02746","SJAG_01917","SJAG_04351","SJAG_00750","SJAG_03232","SJAG_02061","SJAG_02171","SJAG_01117","SJAG_03012","SJAG_04560","SJAG_01074","SJAG_01517","SJAG_00887","SJAG_01806","SJAG_02812","SJAG_03658","SJAG_03629","SJAG_05332","SJAG_02189","SJAG_01840","SJAG_03882","SJAG_05000","SJAG_03094","SJAG_01176","SJAG_03788","SJAG_02026"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60656,62967,66592,68831,73338,77260,78002,78568,80339,80717,89142,91649,98625,101614,110926,112975,117943],"is_not":false,"summary":null,"term":"GO:0043022"},{"annotations":[100783,102949,99033,72391,105912,107597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097177"},{"annotations":[71675,76990,88724,76962,61980,79631,73977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043023"},{"annotations":[103849,99776,77867,74855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043024"}]},"cv_name":"molecular_function","definition":"Binding to a ribosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00231":null,"SJAG_00750":null,"SJAG_00887":null,"SJAG_01074":null,"SJAG_01117":null,"SJAG_01176":null,"SJAG_01249":null,"SJAG_01438":null,"SJAG_01517":null,"SJAG_01806":null,"SJAG_01840":null,"SJAG_01917":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02171":null,"SJAG_02189":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_03012":null,"SJAG_03094":null,"SJAG_03232":null,"SJAG_03548":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03788":null,"SJAG_03882":null,"SJAG_04351":null,"SJAG_04560":null,"SJAG_04635":null,"SJAG_04874":null,"SJAG_05000":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribosome binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030376"],"synonyms":[{"name":"ribosome receptor activity","type":"narrow"}],"termid":"GO:0043022","terms_by_termid":{"GO:0043022":null,"GO:0043023":null,"GO:0043024":null,"GO:0097177":null}}


id: PBO:0116665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 5A","termid":"PBO:0116665"}


id: PBO:0057683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1272","termid":"PBO:0057683"}


id: GO:0018537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydromethanopterin + coenzyme F420 + H+ = 5,10-methylenetetrahydromethanopterin + reduced coenzyme F420.","definition_xrefs":["RHEA:21144","EC:1.5.98.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase activity","secondary_identifiers":["MetaCyc:METHELENE-THMPT-OXI-RXN","UM-BBD_reactionID:r0354","KEGG_REACTION:R04464"],"synonyms":[{"name":"5,10-methylenetetrahydromethanopterin cyclohydrolase activity","type":"related"},{"name":"5,10-methylenetetrahydromethanopterin reductase activity","type":"related"},{"name":"5-methyltetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"N(5),N(10)-methylenetetrahydromethanopterin reductase activity","type":"related"},{"name":"N(5),N(10)-methylenetetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"N5,N10-methylenetetrahydromethanopterin reductase activity","type":"related"},{"name":"N5,N10-methylenetetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase activity","type":"related"},{"name":"methylene-H(4)MPT reductase activity","type":"related"},{"name":"methylene-H4MPT reductase activity","type":"related"},{"name":"methylenetetrahydromethanopterin reductase activity","type":"exact"}],"termid":"GO:0018537"}


id: PR:O94441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo-transport protein ypp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.04","synonyms":[{"name":"Spom972h-ypp1","type":"exact"}],"termid":"PR:O94441"}


id: GO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ecdysteroid = UDP + glucosyl-ecdysteroid.","definition_xrefs":["PMID:10073711","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"ecdysteroid UDP-glucosyltransferase activity","secondary_identifiers":["GO:0050489"],"synonyms":[{"name":"ecdysteroid UDP-glucosyl/UDP-glucuronosyl transferase activity","type":"related"}],"termid":"GO:0050488"}


id: GO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases its size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont in host (obsolete GO:0044128)","termid":"GO:0044128"}


id: PBO:0066221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM25 antisense RNA 1","termid":"PBO:0066221"}


id: GO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:0003275"}


id: PBO:0042485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 10","termid":"PBO:0042485"}


id: PBO:0018065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiamine pyrophosphate transmembrane transporter (predicted)","termid":"PBO:0018065"}


id: PBO:0080037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 23","termid":"PBO:0080037"}


id: FYPO:0001467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases normally following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete normal increase in steady-state intracellular calcium level following extracellular calcium stimulus (obsolete FYPO:0001467)","synonyms":[{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001467"}


id: PBO:0112989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin filament binding protein; regulates actin filament capping by recruiting capping protein to endocytic sites and to the cytokinetic actin ring; interacts with the capping protein complex; adapter that links synaptojanins, Inp52p and Inp53p, to the cortical actin cytoskeleton; contains two WH2-like actin binding domains and a C-terminal capping protein interaction (CPI) motif","termid":"PBO:0112989"}


id: PBO:0072409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 14","termid":"PBO:0072409"}


id: MONDO:0019009
data:
  {"annotated_genes":["SJAG_03067","SJAG_00991","SJAG_05346","SJAG_00289","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86966,86963,86962,86964,86965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011818"}]},"cv_name":"mondo","definition":"Isolated focal cortical dysplasia is a rare, genetic, non-syndromic cerebral malformation due to abnormal neuronal migration disorder characterized by variable-sized, focalized malformations located in any part(s) of the cerebral cortex, which manifests with drug-resistant epilepsy (usually leading to intellectual disability) and behavioral disturbances. Abnormal MRI findings (e.g. abnormal white and/or gray matter signal, blurred gray-white matter junction, localized volume loss, cortical thickening, abnormal gyral pattern, abnormal hippocampus) and variable histopathologic patterns are associated.","definition_xrefs":["Orphanet:65683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortical dysplasia","termid":"MONDO:0017094"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1645432","SCTID:766710005","NANDO:1200564","UMLS:C4707795","GARD:16671"],"synonyms":[{"name":"epilepsy due to FCD","type":"exact"}],"termid":"MONDO:0019009","terms_by_termid":{"MONDO:0011818":null},"xrefs":{"Monarch":{"xref_id":"0019009"}}}


id: SO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA","secondary_identifiers":["http://www.gencodegenes.org/gencode_biotypes.html","http://en.wikipedia.org/wiki/NcRNA"],"synonyms":[{"name":"INSDC_qualifier:other","type":"broad"},{"name":"known_ncrna","type":"exact"},{"name":"noncoding RNA","type":"exact"}],"termid":"SO:0000655"}


id: GO:0071008
data:
  {"annotated_genes":["SJAG_03301","SJAG_00206","SJAG_01214"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57268,78901,109181],"is_not":false,"summary":null,"term":"GO:0071008"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and the U2, U5 and U6 snRNPs.","definition_xrefs":["GOC:ab","ISBN:0879697393","PMID:19239890","GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"post-mRNA release spliceosomal complex","termid":"GO:0071014"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_01214":null,"SJAG_03301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U2-type post-mRNA release spliceosomal complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG post-mRNA release spliceosomal complex","type":"narrow"},{"name":"U2/U5/U6 snRNP complex","type":"exact"},{"name":"U2/U5/U6 tri-snRNP complex","type":"exact"},{"name":"major post-mRNA release spliceosomal complex","type":"exact"},{"name":"mammalian U2-type spliceosomal complex I","type":"narrow"}],"termid":"GO:0071008","terms_by_termid":{"GO:0071008":null}}


id: PBO:0090597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type","termid":"PBO:0090597"}


id: GO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic polypeptide-producing cell. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["GOC:dph","PMID:11076772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell differentiation","synonyms":[{"name":"pancreatic polypeptide-producing cell differentiation","type":"exact"}],"termid":"GO:0003312"}


id: PBO:0025483
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metachromatic leukodystrophy","termid":"PBO:0025483"}


id: MONDO:0016351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anti-HLA hyperimmunization is an increase in anti-HLA antigens mostly seen in chronic renal failure (CRF) patients that have undergone hemodialysis and polytransfusion.","definition_xrefs":["Orphanet:2194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"anti-HLA hyperimmunization","secondary_identifiers":["MEDGEN:929703","UMLS:C4304034","GARD:730"],"termid":"MONDO:0016351","xrefs":{"Monarch":{"xref_id":"0016351"}}}


id: FYPO:0001273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins, but mitotic sister chromatid segregation stops before completing separation of chromosomes, and DNA remains in a single mass at or near the midpoint of the mitotic spindle.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete, unequal mitotic sister chromatid segregation","termid":"FYPO:0001271"},{"relation_name":"is_a","term_name":"mitotic spindle elongation without chromosome separation","termid":"FYPO:0003758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA","synonyms":[{"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA during vegetative growth","type":"exact"},{"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid separation, with unseparated DNA","type":"related"},{"name":"spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001273"}


id: PBO:0085244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the ER; catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; transcriptionally induced in response to unfolded proteins in the ER; CPR5 has a paralog, CPR2, that arose from the whole genome duplication","termid":"PBO:0085244"}


id: PBO:0088333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas5","termid":"PBO:0088333"}


id: GO:0007189
data:
  {"annotated_genes":["SJAG_04026","SJAG_02311","SJAG_00574","SJAG_00472","SJAG_00266","SJAG_02426","SJAG_02444","SJAG_01754","SJAG_04312","SJAG_02481","SJAG_01254","SJAG_01699","SJAG_01245","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102167,106228,106814,107164,94564,109325,116861,109830,115833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[92426,93091,116682,108284,100762],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of adenylyl cyclase activity which results in an increase in the intracellular concentration of cyclic AMP (cAMP). This pathway is negatively regulated by phosphodiesterase, which cleaves cAMP and terminates the signaling.","definition_xrefs":["ISBN:0815316194","GOC:dph","GOC:mah","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","termid":"GO:0007188"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010580","GO:0010579","Reactome:R-HSA-170660"],"synonyms":[{"name":"G protein signaling, adenylate cyclase activating pathway","type":"exact"},{"name":"G protein signaling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G protein signalling, adenylate cyclase activating pathway","type":"exact"},{"name":"G protein signalling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G-protein signaling, adenylate cyclase activating pathway","type":"exact"},{"name":"G-protein signaling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G-protein signalling, adenylate cyclase activating pathway","type":"exact"},{"name":"G-protein signalling, adenylyl cyclase activating pathway","type":"exact"},{"name":"GPCR signaling pathway via activation of adenylate cyclase","type":"exact"},{"name":"GPCR signaling pathway via activation of adenylate cyclase activity","type":"exact"},{"name":"activation of adenylate cyclase activity by G-protein signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity involved in G-protein signaling","type":"related"},{"name":"adenylate cyclase-activating GPCR signaling pathway","type":"exact"},{"name":"positive regulation of adenylate cyclase activity by G-protein signaling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase activity by G-protein signalling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0007189","terms_by_termid":{"GO:0010619":null,"GO:0110034":null}}


id: GO:0005821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the spindle pole body.","definition_xrefs":["PMID:9215630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"intermediate layer of spindle pole body","termid":"GO:0005821"}


id: PBO:0051038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like and fibronectin type III domain containing 1","termid":"PBO:0051038"}


id: PBO:0029521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_normal_volume_septated_spheroid_vegetative_cell","termid":"PBO:0029521"}


id: MONDO:0017422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adactyly of hand (obsolete MONDO:0017422)","secondary_identifiers":["Orphanet:294931"],"synonyms":[{"name":"fingers absent","type":"exact"}],"termid":"MONDO:0017422","xrefs":{"Monarch":{"xref_id":"0017422"}}}


id: PBO:0011460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011460"}


id: GO:0031424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns.","definition_xrefs":["GOC:ebc","GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinization","secondary_identifiers":["Reactome:R-HSA-6805567"],"termid":"GO:0031424"}


id: MONDO:0011899
data:
  {"annotated_genes":["SJAG_02536","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85868,85869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Noonan-like syndrome with loose anagen hair (NS/LAH) is a Noonan-related syndrome, characterized by facial anomalies suggestive of Noonan syndrome ; a distinctive hair anomaly described as loose anagen hair syndrome ; frequent congenital heart defects; distinctive skin features with darkly pigmented skin, keratosis pilaris, eczema or occasional neonatal ichtyosis ; and short stature, often associated with a GH deficiency and psychomotor delays.","definition_xrefs":["Orphanet:2701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loose anagen syndrome","termid":"MONDO:0010908"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome-like disorder with loose anagen hair","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C178129","MEDGEN:334697","GARD:10719","UMLS:C1843181","DOID:0080691","SCTID:723444009","OMIMPS:607721","MESH:C564342"],"synonyms":[{"name":"NS/LAH","type":"exact"},{"name":"NSLH","type":"related"},{"name":"NSLH1","type":"related"},{"name":"Noonan syndrome-like disorder with loose anagen hair","type":"exact"},{"name":"Noonan syndrome-like disorder with loose anagen hair 1","type":"related"},{"name":"Noonan-like syndrome with loose anagen hair","type":"related"},{"name":"Tosti syndrome","type":"exact"}],"termid":"MONDO:0011899","terms_by_termid":{"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0011899"}}}


id: PBO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 20","termid":"PBO:0072415"}


id: MONDO:0010781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"ataxia and polyneuropathy, adult-onset","secondary_identifiers":["UMLS:C1838916","MESH:C564020","DOID:0111750","MEDGEN:374087","OMIM:500010"],"termid":"MONDO:0010781","xrefs":{"Monarch":{"xref_id":"0010781"}}}


id: GO:0070279
data:
  {"annotated_genes":["SJAG_03102","SJAG_00937","SJAG_00186","SJAG_03434","SJAG_03914","SJAG_04678","SJAG_01019","SJAG_03671","SJAG_00714","SJAG_04149","SJAG_03055","SJAG_02791","SJAG_02305","SJAG_03961","SJAG_03306","SJAG_00582","SJAG_01766","SJAG_05230","SJAG_02205","SJAG_00830","SJAG_04988","SJAG_00097","SJAG_00673","SJAG_03312","SJAG_00432","SJAG_04145","SJAG_03861","SJAG_00495","SJAG_04178","SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65591,72762,68233,65401,79675,110752,60239,57875,66420,61682,66729,68906,70801,74552,73740,74749,78649,67750,63652,69202,58321,70253,72500,64981,65650,57217,66438,65816,68048,80048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin B6 compound: pyridoxal, pyridoxamine, pyridoxine, or the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin B6 binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070279","terms_by_termid":{"GO:0030170":null}}


id: PBO:0052468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 14","termid":"PBO:0052468"}


id: MONDO:0005257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patients with advanced heart failure have severe limitations, experiences symptoms even while at rest and are mostly bedbound patients.","definition_xrefs":["EFO:0003149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symptomatic heart failure","termid":"MONDO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"advanced heart failure","secondary_identifiers":["Wikipedia:New_York_Heart_Association_Functional_Classification"],"termid":"MONDO:0005257","xrefs":{"Monarch":{"xref_id":"0005257"}}}


id: GO:0102304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = 7-epi-sesquithujene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.102","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"sesquithujene synthase activity","secondary_identifiers":["MetaCyc:RXN-12838","RHEA:31991"],"termid":"GO:0102304"}


id: PBO:0074554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 7","termid":"PBO:0074554"}


id: GO:0048439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the flower are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower morphogenesis","secondary_identifiers":["GO:0048411"],"termid":"GO:0048439"}


id: FYPO:0000576
data:
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id: FYPO:0000300
data:
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