# terms

id: PBO:0058847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8076","termid":"PBO:0058847"}


id: PBO:0056759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 14, N6-adenosine-methyltransferase subunit","termid":"PBO:0056759"}


id: PBO:0058539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6084","termid":"PBO:0058539"}


id: GO:0098960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occurring in the postsynaptic membrane during synaptic transmission.","definition_xrefs":["GOC:signaling","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor activity","synonyms":[{"name":"neurotransmitter receptor activity involved in chemical synaptic transmission","type":"exact"}],"termid":"GO:0098960"}


id: GO:0060196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:dph","PMID:18075583","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of antisense RNA transcription","termid":"GO:0060194"},{"relation_name":"positively_regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of antisense RNA transcription","termid":"GO:0060196"}


id: PBO:0041828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CART prepropeptide","termid":"PBO:0041828"}


id: MONDO:0015569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nasal pyriform aperture stenosis with holoprosencephaly","secondary_identifiers":["UMLS:C5437790","MEDGEN:1747766","Orphanet:162521"],"synonyms":[{"name":"apertura pyriformis with holoprosencephaly","type":"exact"}],"termid":"MONDO:0015569","xrefs":{"Monarch":{"xref_id":"0015569"}}}


id: GO:0038084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor signaling pathway","synonyms":[{"name":"VEGF signaling","type":"exact"},{"name":"VEGF-activated signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:0038084"}


id: MONDO:0002885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic bacterial infection of major folds of the skin, caused by Corynebacterium minutissimum.","definition_xrefs":["MESH:D004894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrasma","secondary_identifiers":["ICD10CM:L08.1","MEDGEN:4529","ICD9:041.85","SCTID:264207005","DOID:4131","icd11.foundation:272312002","UMLS:C0014752"],"synonyms":[{"name":"infection due to Corynebacterium minutissimum","type":"exact"}],"termid":"MONDO:0002885","xrefs":{"Monarch":{"xref_id":"0002885"}}}


id: PBO:0066099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 3","termid":"PBO:0066099"}


id: GO:0061245
data:
  {"annotated_genes":["SJAG_04322","SJAG_01196","SJAG_03705","SJAG_02022","SJAG_00268","SJAG_01799","SJAG_00661","SJAG_04703","SJAG_00030","SJAG_03048","SJAG_03581","SJAG_00236","SJAG_00596","SJAG_03637","SJAG_00514","SJAG_00333","SJAG_02392","SJAG_00845","SJAG_01388","SJAG_04522","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90206,96182,99974,100066,104972,107925,112612,114351,118206,118940],"is_not":false,"summary":null,"term":"GO:0061245"},{"annotations":[100500,105680,94081],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[104019],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[102706],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000099"},{"annotations":[113354,104852,94919,119088,91479,95993],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a bipolar intracellular organization or cell growth patterns.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00236":null,"SJAG_00268":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01196":null,"SJAG_01388":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061245","terms_by_termid":{"GO:0061245":null,"GO:0061361":null,"GO:2000099":null,"GO:2000100":null,"GO:2000247":null}}


id: PBO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_complete_rereplication","termid":"PBO:0030273"}


id: GO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"positively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagocytosis","synonyms":[{"name":"activation of phagocytosis","type":"narrow"},{"name":"stimulation of phagocytosis","type":"narrow"},{"name":"up regulation of phagocytosis","type":"exact"},{"name":"up-regulation of phagocytosis","type":"exact"},{"name":"upregulation of phagocytosis","type":"exact"}],"termid":"GO:0050766"}


id: PBO:0039137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense of IGF2R non-protein coding RNA","termid":"PBO:0039137"}


id: PBO:0053910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1204","termid":"PBO:0053910"}


id: PBO:0083208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF FRT1","termid":"PBO:0083208"}


id: SO:1000049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any change in mature, spliced and processed, RNA that results from a change in the corresponding DNA sequence.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000049 sequence_variation_affecting_transcript (obsolete SO:1000049)","synonyms":[{"name":"mutation affecting transcript","type":"exact"},{"name":"mutation causing partially characterised change in transcript","type":"related"},{"name":"mutation causing uncharacterised change in transcript","type":"related"},{"name":"sequence variant causing partially characterised change in transcript","type":"exact"},{"name":"sequence variant causing uncharacterised change in transcript","type":"exact"},{"name":"sequence variation affecting transcript","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_change_in_transcript","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_change_in_transcript","type":"exact"}],"termid":"SO:1000049"}


id: MONDO:0006897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic nonsuppurative inflammation of periapical tissue resulting from irritation following pulp disease or endodontic treatment.","definition_xrefs":["MESH:D010484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periapical granuloma","secondary_identifiers":["UMLS:C0031029","DOID:4617","MedDRA:10060985","MEDGEN:45395","EFO:1001096","SCTID:81407003"],"synonyms":[{"name":"apical granuloma","type":"exact"},{"name":"periapical granuloma","type":"exact"}],"termid":"MONDO:0006897","xrefs":{"Monarch":{"xref_id":"0006897"}}}


id: PBO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor Rdi1 (predicted)","termid":"PBO:0000905"}


id: FYPO:0004541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin silencing at centromere","termid":"FYPO:0005071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin silencing at centromere inner repeat","synonyms":[{"name":"increased chromatin silencing at centromere imr","type":"exact"},{"name":"increased chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"increased heterochromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0004541"}


id: GO:0006075
data:
  {"annotated_genes":["SJAG_03587","SJAG_04771","SJAG_04483","SJAG_00218","SJAG_01787","SJAG_04659","SJAG_00876","SJAG_01835","SJAG_04666","SJAG_04462","SJAG_00610","SJAG_02222","SJAG_04668","SJAG_03705","SJAG_01255","SJAG_01290","SJAG_05285","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[71263,113470,76219,116121,74865,91934,73434,106427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[87862,92759],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[106240,105668,103162,91108,118337,92743,118209],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"1,3-beta-glucan anabolism","type":"exact"},{"name":"1,3-beta-glucan biosynthesis","type":"exact"},{"name":"1,3-beta-glucan formation","type":"exact"},{"name":"1,3-beta-glucan synthesis","type":"exact"},{"name":"beta-1,3 glucan anabolism","type":"exact"},{"name":"beta-1,3 glucan biosynthesis","type":"exact"},{"name":"beta-1,3 glucan biosynthetic process","type":"exact"},{"name":"beta-1,3 glucan formation","type":"exact"},{"name":"beta-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0006075","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0070682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 53","termid":"PBO:0070682"}


id: MONDO:0015308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laminopathy, type Decaudain-Vigouroux is characterized by severe metabolic alterations (insulin resistance or hyperinsulinaemia, hypertriglyceridaemia with low HDL-cholesterol, and altered glucose tolerance) and muscular hypertrophy, myalgia, or weakness.","definition_xrefs":["Orphanet:137871"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"hyperlipidemia","termid":"MONDO:0021187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"laminopathy type Decaudain-Vigouroux","secondary_identifiers":["UMLS:C4518324","MEDGEN:1375333","SCTID:724205009","icd11.foundation:815630778"],"synonyms":[{"name":"laminopathy with severe metabolic syndrome and myopathy","type":"exact"}],"termid":"MONDO:0015308","xrefs":{"Monarch":{"xref_id":"0015308"}}}


id: MONDO:0012126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Avascular necrosis of femoral head (ANFH) is a severely disabling disease characterized by progressive groin pain, a limping gait, leg length discrepancy, collapse of the subchondral bone, limitation of hip function and eventual degeneration of the hip joint requiring total hip arthroplasty.","definition_xrefs":["Orphanet:86820"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 2 collagen-related bone disorder (obsolete MONDO:0019686)","termid":"MONDO:0019686"},{"relation_name":"is_a","term_name":"primary avascular necrosis","termid":"MONDO:0018379"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial avascular necrosis of femoral head","secondary_identifiers":["NANDO:1200373","UMLS:C4275066","GARD:10914","icd11.foundation:1216860745","NCIT:C35480","OMIMPS:608805","MEDGEN:909851","SCTID:715657008","MESH:D005271"],"synonyms":[{"name":"ANFH","type":"related"},{"name":"ANFH1","type":"related"},{"name":"aseptic Necrosis of femoral head","type":"exact"},{"name":"aseptic Necrosis of head of femur","type":"exact"},{"name":"avascular NECROSIS of femoral head, primary","type":"related"},{"name":"avascular NECROSIS of femoral head, primary, 1","type":"related"},{"name":"avascular Necrosis of femoral head, primary, 1","type":"related"},{"name":"familial avascular necrosis of the femoral head","type":"related"},{"name":"familial osteonecrosis of the femoral head","type":"exact"},{"name":"femoral head, aseptic Necrosis of","type":"related"},{"name":"femoral head, avascular Necrosis of","type":"related"},{"name":"ischaemic Necrosis of femoral head","type":"related"},{"name":"ischemic Necrosis of femoral head","type":"related"},{"name":"osteonecrosis of femoral head","type":"related"},{"name":"primary avascular necrosis of the femoral head","type":"related"}],"termid":"MONDO:0012126","xrefs":{"Monarch":{"xref_id":"0012126"}}}


id: GO:0019491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["PMID:11823218","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectoine metabolic process","termid":"GO:0042399"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ectoine biosynthetic process","secondary_identifiers":["MetaCyc:P101-PWY"],"synonyms":[{"name":"ectoine anabolism","type":"exact"},{"name":"ectoine biosynthesis","type":"exact"},{"name":"ectoine formation","type":"exact"},{"name":"ectoine synthesis","type":"exact"}],"termid":"GO:0019491"}


id: PBO:0055600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3036","termid":"PBO:0055600"}


id: MONDO:0008314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pronation-supination of the forearm, impairment of","secondary_identifiers":["OMIM:176800","MEDGEN:356828","UMLS:C1867726","MESH:C566757"],"synonyms":[{"name":"pronation-supination of the forearm, impairment of","type":"exact"}],"termid":"MONDO:0008314","xrefs":{"Monarch":{"xref_id":"0008314"}}}


id: GO:0044034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biosynthetic process - chemical reactions and pathways resulting in the formation of substances - which involves more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism biosynthetic process (obsolete GO:0044034)","synonyms":[{"name":"multi-organism biosynthesis","type":"exact"},{"name":"multi-organismal biosynthesis","type":"exact"},{"name":"multi-organismal biosynthetic process","type":"exact"}],"termid":"GO:0044034"}


id: PBO:0058788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7157","termid":"PBO:0058788"}


id: MONDO:0014966
data:
  {"annotated_genes":["SJAG_03970","SJAG_01360","SJAG_04600"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87323,87324,87325],"is_not":false,"summary":null,"term":"MONDO:0014966"}]},"cv_name":"mondo","definition":"Any periventricular nodular heterotopia in which the cause of the disease is a mutation in the NEDD4L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01360":null,"SJAG_03970":null,"SJAG_04600":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular nodular heterotopia 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934636","GARD:16210","OMIM:617201","UMLS:C4310669"],"synonyms":[{"name":"NEDD4L periventricular nodular heterotopia","type":"exact"},{"name":"PVNH7","type":"exact"},{"name":"periventricular nodular heterotopia 7","type":"exact"},{"name":"periventricular nodular heterotopia 7; PVNH7","type":"exact"},{"name":"periventricular nodular heterotopia caused by mutation in NEDD4L","type":"exact"},{"name":"periventricular nodular heterotopia type 7","type":"exact"}],"termid":"MONDO:0014966","terms_by_termid":{"MONDO:0014966":null},"xrefs":{"Monarch":{"xref_id":"0014966"}}}


id: PBO:0045221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC9 and MRPS16 antisense RNA 1","termid":"PBO:0045221"}


id: GO:0010526
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of transposable element expression. Includes both DNA transposons and retrotransposons.","definition_xrefs":["GOC:dph","GOC:tb","PMID:32823517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression, epigenetic","termid":"GO:0045814"},{"relation_name":"negatively_regulates","term_name":"retrotransposition","termid":"GO:0032197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"transposable element silencing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Retrotransposon_silencing"],"synonyms":[{"name":"negative regulation of transposition, RNA-mediated","type":"exact"},{"name":"retrotransposon silencing","type":"narrow"}],"termid":"GO:0010526","terms_by_termid":{"GO:0141005":null}}


id: GO:0043138
data:
  {"annotated_genes":["SJAG_02294","SJAG_05173","SJAG_06597","SJAG_04372","SJAG_05353","SJAG_01354","SJAG_06642","SJAG_04210","SJAG_03898","SJAG_02822","SJAG_00857","SJAG_01221","SJAG_02690","SJAG_02348","SJAG_02200","SJAG_03206","SJAG_00884","SJAG_05372","SJAG_05105"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70670,71127,73809,74971,75107,78028,78323,78472,79797,111261,113257,113258,113259,113260,114592],"is_not":false,"summary":null,"term":"GO:0043138"},{"annotations":[115588,70294,107566,109400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"}]},"cv_name":"molecular_function","definition":"Unwinding a DNA helix in the direction 5' to 3', driven by ATP hydrolysis.","definition_xrefs":["GOC:jl","EC:5.6.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01221":null,"SJAG_01354":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02348":null,"SJAG_02690":null,"SJAG_02822":null,"SJAG_03206":null,"SJAG_03898":null,"SJAG_04210":null,"SJAG_04372":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3'-5' DNA helicase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9613498","Reactome:R-HSA-75949","Reactome:R-HSA-174438","Reactome:R-HSA-9613494","Reactome:R-HSA-9684118","Reactome:R-HSA-9613497","Reactome:R-HSA-167097","GO:0043140","Reactome:R-HSA-9613490"],"synonyms":[{"name":"3' to 5' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 3' to 5' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 3'-5' DNA helicase activity","type":"exact"}],"termid":"GO:0043138","terms_by_termid":{"GO:0043138":null,"GO:1990518":null}}


id: MONDO:1012165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"micromelia, non-human animal","termid":"MONDO:1011765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micromelia, Japanese quail","secondary_identifiers":["OMIA:000648-93934"],"termid":"MONDO:1012165","xrefs":{"Monarch":{"xref_id":"1012165"}}}


id: PBO:0117437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein, implicated in transmembrane trasnsport or organelle fission","termid":"PBO:0117437"}


id: MONDO:0012863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 6","secondary_identifiers":["UMLS:C2676740","MEDGEN:393577","OMIM:612312"],"synonyms":[{"name":"ADHD6","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 6","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 6","type":"exact"},{"name":"digit span quantitative trait locus","type":"related"}],"termid":"MONDO:0012863","xrefs":{"Monarch":{"xref_id":"0012863"}}}


id: MONDO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypokalemic periodic paralysis","termid":"MONDO:0008223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypokalemic periodic paralysis, type 1","secondary_identifiers":["UMLS:C3714580","MEDGEN:811387","OMIM:170400"],"synonyms":[{"name":"HOKPP1","type":"related"},{"name":"hypokalemic periodic paralysis, type 1","type":"exact"}],"termid":"MONDO:0042979","xrefs":{"Monarch":{"xref_id":"0042979"}}}


id: GO:0048536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen development","termid":"GO:0048536"}


id: MONDO:0005515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the oral cavity. The majority are squamous cell carcinomas.","definition_xrefs":["NCIT:C9314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"oral cavity neoplasm","termid":"MONDO:0021245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oral cavity cancer","secondary_identifiers":["ICD9:144.0","ICD9:144","EFO:0005570","SCTID:363505006","ICD9:144.1","ICD9:145.8","DOID:8618","ICD9:145.9","ICD9:149.8","SCTID:363385007","MEDGEN:56298","ICD9:144.9","UMLS:C0153381"],"synonyms":[{"name":"cancer of oral cavity","type":"exact"},{"name":"malignant mouth neoplasm","type":"exact"},{"name":"malignant mouth tumor","type":"exact"},{"name":"malignant mouth tumour","type":"exact"},{"name":"malignant neoplasm of anterior portion of floor of mouth","type":"narrow"},{"name":"malignant neoplasm of floor of mouth","type":"narrow"},{"name":"malignant neoplasm of lateral floor of mouth","type":"narrow"},{"name":"malignant neoplasm of lateral portion of floor of mouth","type":"narrow"},{"name":"malignant neoplasm of mouth","type":"exact"},{"name":"malignant neoplasm of oral cavity","type":"exact"},{"name":"malignant neoplasm of the mouth","type":"exact"},{"name":"malignant oral cavity neoplasm","type":"exact"},{"name":"malignant oral cavity tumor","type":"exact"},{"name":"malignant oral cavity tumour","type":"exact"},{"name":"malignant tumor of anterior floor of mouth","type":"exact"},{"name":"malignant tumor of lateral floor of mouth","type":"exact"},{"name":"malignant tumor of mouth","type":"exact"},{"name":"malignant tumor of oral cavity","type":"exact"},{"name":"malignant tumor of the floor of the mouth","type":"narrow"},{"name":"malignant tumor of the mouth","type":"exact"},{"name":"malignant tumour of anterior floor of mouth","type":"exact"},{"name":"malignant tumour of lateral floor of mouth","type":"exact"},{"name":"malignant tumour of mouth","type":"exact"},{"name":"malignant tumour of oral cavity","type":"exact"},{"name":"malignant tumour of the floor of the mouth","type":"narrow"},{"name":"malignant tumour of the mouth","type":"exact"},{"name":"mouth cancer","type":"related"},{"name":"oral cavity cancer","type":"exact"}],"termid":"MONDO:0005515","xrefs":{"Monarch":{"xref_id":"0005515"}}}


id: MONDO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","secondary_identifiers":["MEDGEN:338127","MESH:C564979","OMIM:254190","UMLS:C1850806"],"synonyms":[{"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","type":"exact"}],"termid":"MONDO:0009687","xrefs":{"Monarch":{"xref_id":"0009687"}}}


id: PBO:0039752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 3","termid":"PBO:0039752"}


id: FYPO:0002448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Dsc E3 ubiquitin ligase complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal Dsc complex assembly","synonyms":[{"name":"normal Dsc E3 ubiquitin ligase assembly","type":"exact"},{"name":"normal Dsc complex assembly during mitotic cell cycle","type":"related"},{"name":"normal Dsc complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002448"}


id: PBO:0017025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial microtubule binder Mmb1","termid":"PBO:0017025"}


id: GO:0047236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylazoxymethanol + UDP-D-glucose = H+ + cycasin + UDP.","definition_xrefs":["MetaCyc:2.4.1.171-RXN","EC:2.4.1.171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"methyl-ONN-azoxymethanol beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:20205"],"synonyms":[{"name":"UDP-glucose:methyl-ONN-azoxymethanol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-methylazoxymethanol glucosyltransferase activity","type":"related"},{"name":"cycasin synthase activity","type":"related"},{"name":"methyl-ONN-azoxymethanol glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-methylazoxymethanol glucosyltransferase activity","type":"related"}],"termid":"GO:0047236"}


id: GO:0072169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the posterior mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"is_a","term_name":"specification of mesonephric tubule identity","termid":"GO:0072167"},{"relation_name":"part_of","term_name":"posterior mesonephric tubule development","termid":"GO:0072166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of posterior mesonephric tubule identity","termid":"GO:0072169"}


id: PBO:0003667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit, histone demethylase H3-K36 specific Jmj3","termid":"PBO:0003667"}


id: SO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III. This promoter is intragenic and includes an A box, an intermediate element, and a C box. This is well conserved in the 5s rRNA promoters across species.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_1","synonyms":[{"name":"RNApol III promoter type 1","type":"exact"}],"termid":"SO:0000617"}


id: GO:0051924
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113670,91556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[102464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium transport","type":"exact"}],"termid":"GO:0051924","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0078189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-2","termid":"PBO:0078189"}


id: PBO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body","termid":"PBO:0030022"}


id: FYPO:0006029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament depolymerization, i.e. the removal of actin monomers from a filament, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:11694585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"decreased actin filament depolymerization","synonyms":[{"name":"decreased actin filament depolymerisation","type":"exact"},{"name":"decreased actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased actin filament depolymerization during vegetative growth","type":"exact"},{"name":"reduced actin filament depolymerization","type":"exact"}],"termid":"FYPO:0006029"}


id: PBO:0017524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Fol3 (predicted)","termid":"PBO:0017524"}


id: SO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert made from cDNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cDNA","termid":"SO:0000756"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_cDNA_insert","synonyms":[{"name":"cloned cDNA insert","type":"exact"}],"termid":"SO:0000913"}


id: PBO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR5A antisense RNA 1","termid":"PBO:0050796"}


id: PATO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000742 low enzyme function value (obsolete PATO:0000742)","termid":"PATO:0000742"}


id: MONDO:0020297
data:
  {"annotated_genes":["SJAG_02536","SJAG_00993","SJAG_01181","SJAG_03126","SJAG_03453","SJAG_02342","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[85384,85382,85383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[85387,85388,85389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[87612,87613,87611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[86131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[87001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85869,85868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02536":null,"SJAG_02923":null,"SJAG_03126":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome and Noonan-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19561","MESH:C537846","Orphanet:98733","UMLS:C5681679","MEDGEN:1826127"],"termid":"MONDO:0020297","terms_by_termid":{"MONDO:0008104":null,"MONDO:0009026":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0020297"}}}


id: MONDO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microcephaly microphthalmos blindness","secondary_identifiers":["MEDGEN:419434","MESH:C537541","UMLS:C2931526"],"termid":"MONDO:0043135","xrefs":{"Monarch":{"xref_id":"0043135"}}}


id: GO:0071547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL4-TDRD9 module, a set of proteins that act in the secondary piRNA pathway.","definition_xrefs":["GOC:sp","PMID:20011505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"piP-body","termid":"GO:0071547"}


id: MONDO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the superior vena cava. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C6745"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pulmonary artery leiomyosarcoma","termid":"MONDO:0004207"},{"relation_name":"is_a","term_name":"superior vena cava angiosarcoma","termid":"MONDO:0003032"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"superior vena cava leiomyosarcoma","secondary_identifiers":["UMLS:C1336531","DOID:7390","MEDGEN:236963"],"synonyms":[{"name":"anterior vena cava leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of Superior vena cava","type":"exact"},{"name":"leiomyosarcoma of anterior vena cava","type":"exact"},{"name":"leiomyosarcoma of the Superior vena cava","type":"exact"}],"termid":"MONDO:0004208","xrefs":{"Monarch":{"xref_id":"0004208"}}}


id: GO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an isopeptide bond. An isopeptide bond is an amide linkage between a carboxyl group of one amino acid and an amino group of another amino acid in which at least one of these groups is not on the a-carbon of one of the amino acids (for example, the link between an epsilon-amino group of a lysine molecule to a carboxyl group on a second amino acid is an isopeptide bond).","definition_xrefs":["GOC:mah","Wikipedia:Isopeptidase"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptidase activity (obsolete GO:0070122)","termid":"GO:0070122"}


id: FYPO:0005240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tryptophan measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular tryptophan level","synonyms":[{"name":"decreased cellular L-tryptophan level","type":"exact"},{"name":"decreased cellular tryptophan level during mitotic cell cycle","type":"related"},{"name":"decreased cellular tryptophan level during vegetative growth","type":"exact"},{"name":"decreased level of tryptophan in cell","type":"exact"},{"name":"reduced cellular tryptophan level","type":"exact"},{"name":"reduced level of tryptophan in cell","type":"exact"}],"termid":"FYPO:0005240"}


id: GO:0031731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR6 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR6 chemokine receptor binding","synonyms":[{"name":"CCR6 chemokine receptor ligand","type":"narrow"},{"name":"LARC receptor binding","type":"exact"}],"termid":"GO:0031731"}


id: GO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, fungal cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antifungal peptide activity (obsolete GO:0003799)","synonyms":[{"name":"antifungal peptide activity","type":"exact"}],"termid":"GO:0003799"}


id: PBO:0113539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein; involved in oxidative stress response and modulation of replicative lifespan; targeted to vacuole via AP-3 pathway; undergoes autophosphorylation, which is abolished by mutation of Asp781 in catalytic motif (D781N); P5 ATPase subfamily member with similarity to yeast Spf1p and homology to human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome","termid":"PBO:0113539"}


id: FYPO:0006483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin ssDNA (lagging strand) loading is decreased during the mitotic cell cycle. Cohesin ssDNA (lagging strand) loading is the topological linking of a cohesin ring complex to single-stranded DNA, i.e. the lagging strand, in chromatin.","definition_xrefs":["PomBase:mah","GO:0062022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic cohesin loading","termid":"FYPO:0005555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased mitotic cohesin ssDNA (lagging strand) loading","synonyms":[{"name":"decreased cohesin ssDNA (lagging strand) loading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin ssDNA (lagging strand) loading during vegetative growth","type":"exact"},{"name":"decreased mitotic cohesin association with ssDNA (lagging strand) chromatin","type":"exact"},{"name":"decreased mitotic cohesin localization to ssDNA (lagging strand) chromatin","type":"exact"},{"name":"reduced mitotic cohesin ssDNA (lagging strand) loading","type":"exact"}],"termid":"FYPO:0006483"}


id: MONDO:0024646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete refractory (obsolete MONDO:0024646)","secondary_identifiers":["NCIT:C39752"],"termid":"MONDO:0024646","xrefs":{"Monarch":{"xref_id":"0024646"}}}


id: GO:0051352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ligase activity (obsolete GO:0051352)","synonyms":[{"name":"down regulation of ligase activity","type":"exact"},{"name":"down-regulation of ligase activity","type":"exact"},{"name":"downregulation of ligase activity","type":"exact"},{"name":"inhibition of ligase activity","type":"narrow"},{"name":"ligase inhibitor","type":"exact"}],"termid":"GO:0051352"}


id: GO:0042059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"is_a","term_name":"negative regulation of ERBB signaling pathway","termid":"GO:1901185"},{"relation_name":"negatively_regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-182971"],"synonyms":[{"name":"down regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of EGFR signaling pathway","type":"exact"}],"termid":"GO:0042059"}


id: PBO:0086394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cysteine synthase; localized to the mitochondrial outer membrane","termid":"PBO:0086394"}


id: MONDO:0014023
data:
  {"annotated_genes":["SJAG_05219"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85645],"is_not":false,"summary":null,"term":"MONDO:0014023"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"},{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005336","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy with intellectual disability and severe epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615042","GARD:12416","DOID:0080571","Orphanet:329178","UMLS:C5190603","MEDGEN:1682844"],"synonyms":[{"name":"CDG Iu","type":"related"},{"name":"CDG syndrome type Iu","type":"exact"},{"name":"CDG-Iu","type":"exact"},{"name":"CDG1U","type":"exact"},{"name":"CMD with intellectual disability and severe epilepsy","type":"exact"},{"name":"DPM2-CDG","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Iu","type":"exact"},{"name":"congenital disorder of glycosylation type 1u","type":"exact"},{"name":"congenital disorder of glycosylation type Iu","type":"exact"},{"name":"congenital disorder of glycosylation, type Iu","type":"related"}],"termid":"MONDO:0014023","terms_by_termid":{"MONDO:0014023":null},"xrefs":{"Monarch":{"xref_id":"0014023"}}}


id: PBO:0002988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.5","termid":"PBO:0002988"}


id: SO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the 3' exon that is not coding.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_region_of_exon","termid":"SO:0001214"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_noncoding_region","synonyms":[{"name":"three prime coding exon noncoding region","type":"exact"},{"name":"three_prime_exon_noncoding_region","type":"exact"}],"termid":"SO:0000484"}


id: PBO:0066345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 7","termid":"PBO:0066345"}


id: MONDO:0017826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-functioning pituitary adenoma","termid":"MONDO:0019613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null pituitary adenoma","secondary_identifiers":["Orphanet:314790","MEDGEN:1813085","UMLS:C5680967","GARD:21393","ICD10CM:D35.2","NCIT:C45924"],"termid":"MONDO:0017826","xrefs":{"Monarch":{"xref_id":"0017826"}}}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: PBO:0036256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism in human (predicted)","termid":"PBO:0036256"}


id: PR:O59707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPS-like protein C36.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.10","synonyms":[{"name":"Spom972h-SPBC36.10","type":"exact"}],"termid":"PR:O59707"}


id: MONDO:0015399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glossopalatine ankylosis is a disorder belonging to the group of oromandibular-limb hypogenesis syndromes (OLHS) and is characterized by the presence of an intraoral band of variable thickness attaching the tongue to the hard palate or maxillary alveolar ridge.","definition_xrefs":["Orphanet:141163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oromandibular-limb hypogenesis syndrome","termid":"MONDO:0017139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"glossopalatine ankylosis","secondary_identifiers":["SCTID:717814004","GARD:19954","icd11.foundation:1608847387","MEDGEN:929238","UMLS:C4303569"],"synonyms":[{"name":"Cosack syndrome","type":"exact"}],"termid":"MONDO:0015399","xrefs":{"Monarch":{"xref_id":"0015399"}}}


id: PBO:0090762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Vps15","termid":"PBO:0090762"}


id: PBO:0040878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 3","termid":"PBO:0040878"}


id: PBO:0057040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 132","termid":"PBO:0057040"}


id: GO:0070163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adiponectin secretion","termid":"GO:0070163"}


id: PBO:0087284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) subunit; interacts with the RNA component of SRP to form the Alu domain, which is the region of SRP responsible for arrest of nascent chain elongation during membrane targeting; homolog of mammalian SRP14","termid":"PBO:0087284"}


id: PBO:0068642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 23, pseudogene","termid":"PBO:0068642"}


id: MONDO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transcobalamin deficiency (TC) is a disorder of cobalamin transport that usually presents during the first few months of life and is characterized by megaloblastic anemia, failure to thrive, vomiting, weakness and pancytopenia.","definition_xrefs":["Orphanet:859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"transcobalamin II deficiency","secondary_identifiers":["SCTID:237934001","NCIT:C142806","UMLS:C0342701","DOID:0050818","ICD10CM:D51.2","OMIM:275350","MEDGEN:137976","GARD:12338"],"synonyms":[{"name":"TC 2 deficiency","type":"related"},{"name":"TCN2 deficiency","type":"exact"},{"name":"Tcn2 deficiency","type":"related"},{"name":"inherited deficiency of transcobalamin","type":"exact"},{"name":"transcobalamin 2 deficiency","type":"related"},{"name":"transcobalamin II deficiency","type":"exact"},{"name":"transcobalamin deficiency","type":"related"}],"termid":"MONDO:0010149","xrefs":{"Monarch":{"xref_id":"0010149"}}}


id: SO:0001429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_binding_site","termid":"SO:0001655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_binding_site","synonyms":[{"name":"DNA binding site","type":"exact"}],"termid":"SO:0001429"}


id: PBO:0004957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase Pho1","termid":"PBO:0004957"}


id: PBO:0043832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 4","termid":"PBO:0043832"}


id: GO:0160025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sensory perception which causes the desire or reflex to scratch.","definition_xrefs":["PMID:30734045","Wikipedia:Itch","PMID:29723501","PMID:26015312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of itch","synonyms":[{"name":"pruritus","type":"exact"}],"termid":"GO:0160025"}


id: PBO:0085687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from cell cycle arrest; acts in response to pheromone; also involved in regulation of intra-S DNA damage checkpoint and autophagy; is essential for dephosphorylation of Atg13p; interacts with Far3p, Far7p, Far8p, Far9p, Far10p and with the phosphatases Pph21p, Pph22p and Pph3p; has similarity to the N- and C-termini of N. crassa HAM-2; similar to human Fam40A and Fam40B","termid":"PBO:0085687"}


id: _global:has_ratio_quality
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ratio_quality","termid":"_global:has_ratio_quality"}


id: MONDO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse replacement of the lung tissue by connective tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse pulmonary fibrosis","secondary_identifiers":["NCIT:C27216","DOID:5641","MEDGEN:167847","UMLS:C0865849"],"termid":"MONDO:0003563","xrefs":{"Monarch":{"xref_id":"0003563"}}}


id: PBO:0110424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 3","termid":"PBO:0110424"}


id: GO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + progesterone = 11alpha-hydroxyprogesterone + A + H2O.","definition_xrefs":["RHEA:18205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progesterone monooxygenase activity","termid":"GO:0050214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"progesterone 11-alpha-monooxygenase activity","secondary_identifiers":["EC:1.14.99.14","KEGG_REACTION:R02214","MetaCyc:PROGESTERONE-11-ALPHA-MONOOXYGENASE-RXN"],"synonyms":[{"name":"progesterone 11-alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11a-monooxygenase activity","type":"exact"},{"name":"progesterone 11alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11alpha-monooxygenase activity","type":"related"},{"name":"progesterone,hydrogen-donor:oxygen oxidoreductase (11alpha-hydroxylating)","type":"related"}],"termid":"GO:0050212"}


id: PBO:0083803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that associates with contractile actomyosin ring; required for ingression of the plasma membrane into the bud neck during cytokinesis; C2 domain, a membrane targeting module, is required for function; activates chitin synthase activity of Chs2p during cytokinesis","termid":"PBO:0083803"}


id: PBO:0070636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 7","termid":"PBO:0070636"}


id: GO:0034499
data:
  {"annotated_genes":["SJAG_00314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80714],"is_not":false,"summary":null,"term":"GO:0034499"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"late endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PVE to Golgi transport","type":"exact"},{"name":"prevacuolar endosome to Golgi transport","type":"exact"}],"termid":"GO:0034499","terms_by_termid":{"GO:0034499":null}}


id: GO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(2-hydroxyphenyl)propanoate + NAD+ = trans-2-coumarate + H+ + NADH.","definition_xrefs":["EC:1.3.1.11","RHEA:21444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-coumarate reductase activity","secondary_identifiers":["KEGG_REACTION:R03709","MetaCyc:COUMARATE-REDUCTASE-RXN"],"synonyms":[{"name":"3-(2-hydroxyphenyl)propanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"coumarate reductase activity","type":"exact"},{"name":"melilotate dehydrogenase activity","type":"related"}],"termid":"GO:0047788"}


id: MONDO:0006649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anterior ischemic optic neuropathy (AION) is an eye disease characterized by infarction of the optic disk leading to vision loss. It can be nonarteritic (nonarteritic anterior ischemic optic neuropathy or NAION) or arteritic, the latter being associated with giant cell arteritis (GCA; often termed temporal arteritis). Vision loss with both varieties is typically rapid (over minutes, hours, or days) and painless. Symptoms such as a general feeling of being unwell (malaise), muscle aches and pains, headaches over the temple, pain when combing hair, pain in the jaw after chewing, and tenderness over the temporal artery (one of the major arteries of the head) may be present with giant cell arteritis. At exam, visual acuity is reduced and the optic disk is swollen. In both subtypes, visual field examination is often reduced in the inferior and central visual fields. The visual loss is usually permanent, with some recovery possibly occurring within the first weeks or months. The arteritic variety is treated with corticosteroids. Treatment of the nonarteritic variety withaspirinor corticosteroids has not been helpful.","direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior ischemic optic neuropathy","secondary_identifiers":["UMLS:C0751711","icd11.foundation:632323575","DOID:12010","MedDRA:10068250","SCTID:404659001","EFO:1000809","ICD9:377.41","MEDGEN:199716","GARD:9790","MESH:D018917"],"synonyms":[{"name":"aion","type":"related"},{"name":"ischaemic optic neuropathy","type":"exact"},{"name":"ischemic optic neuropathy","type":"exact"},{"name":"optic disc infarction leading to vision loss","type":"related"},{"name":"optic disk infarction leading to vision loss","type":"related"}],"termid":"MONDO:0006649","xrefs":{"Monarch":{"xref_id":"0006649"}}}


id: GO:0031205
data:
  {"annotated_genes":["SJAG_00175","SJAG_02588","SJAG_02354","SJAG_03955"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90922,96066,73520,70270],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum membrane-associated complex involved in the translocation of proteins that are targeted to the ER. In yeast, this complex consists of two subcomplexes, namely, the Sec61 complex and the Sec62/Sec63 complex.","definition_xrefs":["GOC:mtg_sensu","PMID:14617809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"endoplasmic reticulum Sec complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031205","terms_by_termid":{"GO:0031207":null}}


id: PBO:0053286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and calponin homology domains 1","termid":"PBO:0053286"}


id: PBO:0084378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-ornithine transaminase (OTAse); catalyzes the second step of arginine degradation, expression is dually-regulated by allophanate induction and a specific arginine induction process; not nitrogen catabolite repression sensitive; protein abundance increases in response to DNA replication stress; human homolog OAT complements yeast null mutant","termid":"PBO:0084378"}


id: PBO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 5","termid":"PBO:0050188"}


id: MONDO:0030958
data:
  {"annotated_genes":["SJAG_03551"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87294],"is_not":false,"summary":null,"term":"MONDO:0030958"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 35, childhood-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619921","UMLS:C5677003","MEDGEN:1801185","DOID:0060955"],"synonyms":[{"name":"DYT35","type":"exact"},{"name":"dystonia 35, childhood-onset","type":"exact"}],"termid":"MONDO:0030958","terms_by_termid":{"MONDO:0030958":null},"xrefs":{"Monarch":{"xref_id":"0030958"}}}


id: PBO:0063123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 8","termid":"PBO:0063123"}


id: FYPO:0008029
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119872],"is_not":false,"summary":null,"term":"FYPO:0008029"}]},"cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed during fungal hyphal growth phase in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost.","definition_xrefs":["PMID:36058798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during hyphal growth phase","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"termid":"FYPO:0008029","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0008029":null}}


id: MONDO:1012694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in dogs due to a mutation in the PRKG2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, PRKG2-related, dog","secondary_identifiers":["OMIA:001485-9615"],"termid":"MONDO:1012694","xrefs":{"Monarch":{"xref_id":"1012694"}}}


id: PBO:0044610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13 pseudogene 1","termid":"PBO:0044610"}


id: PBO:0075180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 10","termid":"PBO:0075180"}


id: PBO:0091534
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ADP-Pi-bound F-actin Kd 220 nM","termid":"PBO:0091534"}


id: PBO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 22, pseudogene","termid":"PBO:0042666"}


id: PBO:0086020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086020"}


id: PBO:0042756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 19","termid":"PBO:0042756"}


id: MONDO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by an Orthopoxvirus, which is transmitted by primates or rodents, and which is characterized by a prodromal syndrome of fever, chills, headache, myalgia, and lymphedema; initial symptoms are followed by a generalized papular rash that typically progresses from vesiculation through crusting over the course of two weeks.","definition_xrefs":["NCIT:C128421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monkeypox","secondary_identifiers":["MEDGEN:124442","MESH:D045908","SCTID:359814004","UMLS:C0276180","ICD9:059.01","ICD10CM:B04","DOID:3292","ICD9:136.8"],"synonyms":[{"name":"Monkeypox virus infection","type":"exact"},{"name":"infections, Monkeypox virus","type":"related"}],"termid":"MONDO:0002594","xrefs":{"Monarch":{"xref_id":"0002594"}}}


id: PBO:0004001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Ned8","termid":"PBO:0004001"}


id: PBO:0060933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFATC2IP antisense RNA 1","termid":"PBO:0060933"}


id: GO:1901525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"negative regulation of autophagy of mitochondrion","termid":"GO:1903147"},{"relation_name":"negatively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of mitophagy","synonyms":[{"name":"down regulation of macromitophagy","type":"exact"},{"name":"down-regulation of macromitophagy","type":"exact"},{"name":"downregulation of macromitophagy","type":"exact"},{"name":"inhibition of macromitophagy","type":"narrow"},{"name":"negative regulation of macromitophagy","type":"exact"}],"termid":"GO:1901525"}


id: PBO:0091608
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KM=63 uM","termid":"PBO:0091608"}


id: GO:0050464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NADP+ + H2O = nitrate + NADPH + H+.","definition_xrefs":["RHEA:19061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase [NAD(P)H] activity","termid":"GO:0050463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitrate reductase (NADPH) activity","secondary_identifiers":["MetaCyc:NITRATE-REDUCTASE-NADPH-RXN","EC:1.7.1.3"],"synonyms":[{"name":"NADPH-nitrate reductase activity","type":"related"},{"name":"NADPH:nitrate oxidoreductase activity","type":"related"},{"name":"NADPH:nitrate reductase activity","type":"related"},{"name":"assimilatory NADPH-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"assimilatory reduced nicotinamide adenine dinucleotide phosphate-nitrate reductase activity","type":"related"},{"name":"nitrate reductase (NADPH(2)) activity","type":"related"},{"name":"nitrate reductase (NADPH2)","type":"related"},{"name":"nitrite:NADP+ oxidoreductase activity","type":"related"},{"name":"triphosphopyridine nucleotide-nitrate reductase activity","type":"related"}],"termid":"GO:0050464"}


id: GO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of transition metal ions within a cell. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular transition metal ion homeostasis (obsolete GO:0046916)","synonyms":[{"name":"cellular transition metal ion homeostasis","type":"exact"}],"termid":"GO:0046916"}


id: GO:0010965
data:
  {"annotated_genes":["SJAG_04968","SJAG_03048","SJAG_05236","SJAG_00883","SJAG_02451","SJAG_04259","SJAG_03126","SJAG_01679","SJAG_01082","SJAG_01837","SJAG_02498","SJAG_03351","SJAG_01330","SJAG_04884","SJAG_03681","SJAG_04699","SJAG_01297","SJAG_01805","SJAG_04573","SJAG_02169","SJAG_04126","SJAG_04999","SJAG_00460","SJAG_02380","SJAG_02336","SJAG_03350","SJAG_03353","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91061,114087,108568,107548,112269,104211,116202,99914,114574],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[115858,106639,102117,114803,99758,110216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[103596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[94536],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116975],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[115072,94144,100463,98025,102698,111683,102427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[116977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[99929,99934,96933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic sister chromatid separation. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"regulates","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010965","terms_by_termid":{"GO:0007094":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null,"GO:2000816":null}}


id: GO:0032483
data:
  {"annotated_genes":["SJAG_03488","SJAG_04329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70251,75249],"is_not":false,"summary":null,"term":"GO:0032483"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rab protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rab protein signal transduction","termid":"GO:0032482"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Rab protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032483","terms_by_termid":{"GO:0032483":null}}


id: PBO:0067412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 523, pseudogene","termid":"PBO:0067412"}


id: FYPO:0002044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished premeiotic DNA replication","synonyms":[{"name":"absent premeiotic DNA replication","type":"exact"},{"name":"premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0002044"}


id: MONDO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with central nervous system predominant involvement (obsolete MONDO:0018118)","secondary_identifiers":["Orphanet:352306"],"termid":"MONDO:0018118","xrefs":{"Monarch":{"xref_id":"0018118"}}}


id: PR:O94659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.01c","synonyms":[{"name":"Spom972h-nog1","type":"exact"}],"termid":"PR:O94659"}


id: GO:1901459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to acetate","termid":"GO:1901457"},{"relation_name":"positively_regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to acetate","synonyms":[{"name":"activation of response to acetate","type":"narrow"},{"name":"up regulation of response to acetate","type":"exact"},{"name":"up-regulation of response to acetate","type":"exact"},{"name":"upregulation of response to acetate","type":"exact"}],"termid":"GO:1901459"}


id: GO:0060211
data:
  {"annotated_genes":["SJAG_01436","SJAG_04427","SJAG_02370","SJAG_00686","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98837],"is_not":false,"summary":null,"term":"GO:0060211"},{"annotations":[92008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[73144,90038,105238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0000289"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01436":null,"SJAG_02370":null,"SJAG_04427":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA poly(A) tail shortening","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 3' to 5' mRNA deadenylation","type":"related"},{"name":"regulation of mRNA deadenylation","type":"related"},{"name":"regulation of nuclear mRNA poly(A) tail shortening","type":"related"}],"termid":"GO:0060211","terms_by_termid":{"GO:0060211":null,"GO:0060212":null,"GO:0060213":null}}


id: MONDO:1010124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune lymphoproliferative syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome, non-human animal","secondary_identifiers":["OMIA:002064"],"termid":"MONDO:1010124","xrefs":{"Monarch":{"xref_id":"1010124"}}}


id: PBO:0059971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 16","termid":"PBO:0059971"}


id: PBO:0091345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane potassium ion/proton antiporter Kha1","termid":"PBO:0091345"}


id: GO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-valine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-valine modification","termid":"GO:0018213"}


id: GO:0019338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentachlorophenol metabolic process","termid":"GO:0018961"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol catabolic process","secondary_identifiers":["MetaCyc:PCPDEG-PWY"],"synonyms":[{"name":"pentachlorophenol breakdown","type":"exact"},{"name":"pentachlorophenol catabolism","type":"exact"},{"name":"pentachlorophenol degradation","type":"exact"}],"termid":"GO:0019338"}


id: PBO:0077145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 2","termid":"PBO:0077145"}


id: PBO:0083701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated chaperone involved in protein targeting; redirects mitochondrial membrane protein precursors to mitochondrial translocation system; required for peroxisomal protein import and involved in peroxisome assembly; facilitates import of Mim1p and Mim2p into the mitochondrial outer membrane; homologous to E. coli DnaJ","termid":"PBO:0083701"}


id: PBO:0060703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5","termid":"PBO:0060703"}


id: PBO:0064332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 2","termid":"PBO:0064332"}


id: PBO:0045912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 8","termid":"PBO:0045912"}


id: PBO:0034355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increases_expression_of","termid":"PBO:0034355"}


id: GO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+-)-trans-acenaphthene-1,2-diol + 2 NADP+ = acenaphthene-1,2-dione + 2 H+ + 2 NADPH.","definition_xrefs":["EC:1.10.1.1","RHEA:22184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","termid":"GO:0016680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trans-acenaphthene-1,2-diol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04059","MetaCyc:1.10.1.1-RXN"],"synonyms":[{"name":"(+-)-trans-acenaphthene-1,2-diol:NADP+ oxidoreductase activity","type":"related"},{"name":"trans-1,2-acenaphthenediol dehydrogenase activity","type":"related"}],"termid":"GO:0047062"}


id: PBO:0028528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_rDNA","termid":"PBO:0028528"}


id: PBO:0050128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 38","termid":"PBO:0050128"}


id: MONDO:0009673
data:
  {"annotated_genes":["SJAG_03894"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86797],"is_not":false,"summary":null,"term":"MONDO:0009673"}]},"cv_name":"mondo","definition":"Proximal spinal muscular atrophy type 2 (SMA2) is a chronic infantile form of proximal spinal muscular atrophy characterized by muscle weakness and hypotonia resulting from the degeneration and loss of the lower motor neurons in the spinal cord and the brain stem nuclei.","definition_xrefs":["Orphanet:83418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal spinal muscular atrophy","termid":"MONDO:0019079"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"spinal muscular atrophy, type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4945","icd11.foundation:867148636","MEDGEN:95975","MESH:C536879","NANDO:1200005","SCTID:128212001","UMLS:C0393538","OMIM:253550","ICD9:335.19","DOID:0050530"],"synonyms":[{"name":"Dubowitz disease","type":"related"},{"name":"Intermediate spinal muscular atrophy","type":"exact"},{"name":"SMA II","type":"related"},{"name":"SMA type 2","type":"exact"},{"name":"SMA type II","type":"exact"},{"name":"SMA-II","type":"exact"},{"name":"SMA2","type":"exact"},{"name":"Sma 2","type":"related"},{"name":"chronic infantile spinal muscular atrophy","type":"exact"},{"name":"chronic spinal muscular atrophy","type":"exact"},{"name":"muscular atrophy, spinal, Intermediate type","type":"related"},{"name":"muscular atrophy, spinal, infantile chronic form","type":"exact"},{"name":"muscular atrophy, spinal, intermediate type","type":"exact"},{"name":"proximal spinal muscular atrophy type 2","type":"related"},{"name":"spinal muscular atrophy type 2","type":"related"},{"name":"spinal muscular atrophy type II","type":"related"},{"name":"spinal muscular atrophy, type 2","type":"related"},{"name":"spinal muscular atrophy, type II","type":"exact"},{"name":"spinal muscular atrophy-2","type":"exact"}],"termid":"MONDO:0009673","terms_by_termid":{"MONDO:0009673":null},"xrefs":{"Monarch":{"xref_id":"0009673"}}}


id: MONDO:1040035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the LRIT3 gene.","definition_xrefs":["PMID:31189098","PMID:23246293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"LRIT3-related retinopathy","synonyms":[{"name":"LRIT3-related retinopathy","type":"exact"}],"termid":"MONDO:1040035","xrefs":{"Monarch":{"xref_id":"1040035"}}}


id: PR:O94364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wpl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wings apart-like protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.17c","synonyms":[{"name":"Spom972h-wpl1","type":"exact"}],"termid":"PR:O94364"}


id: GO:0010929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"positively_regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010929"}


id: PBO:0080356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 11 pseudogene","termid":"PBO:0080356"}


id: FYPO:0002782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to a salt stress. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased transcription during cellular response to salt stress","synonyms":[{"name":"increased transcription during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002782"}


id: MONDO:0018310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langerhans cell histiocytosis (LCH) is a systemic disease associated with the proliferation and accumulation (usually in granulomas) of Langerhans cells in various tissues.","definition_xrefs":["Orphanet:389"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"splenic disorder","termid":"MONDO:0002332"},{"relation_name":"is_a","term_name":"histiocytosis","termid":"MONDO:0002637"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"dendritic cell tumor","termid":"MONDO:0020082"},{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Langerhans cell histiocytosis","secondary_identifiers":["NCIT:C3107","MedDRA:10069698","SCTID:65399007","ICDO:9754/3","MEDGEN:5568","NORD:1348","OMIM:604856","ICDO:9751/1","ONCOTREE:LCH","GARD:6858","icd11.foundation:216625985","DOID:2571","icd11.foundation:1388720498","ICD9:277.89","ICDO:9751/3","ICDO:9753/1","ICD9:202.5","NANDO:2200031","UMLS:C0019621","ICDO:9752/1","EFO:1000318"],"synonyms":[{"name":"LCH","type":"exact"},{"name":"Langerhan's cell histiocytosis","type":"exact"},{"name":"Langerhans cell granulomatosis","type":"exact"},{"name":"Langerhans cell histiocytosis","type":"exact"},{"name":"Langerhans cell histiocytosis, NOS","type":"exact"},{"name":"Langerhans cell histiocytosis, Not otherwise specified","type":"exact"},{"name":"Langerhans-cell histiocytosis","type":"related"},{"name":"Lch","type":"related"},{"name":"histiocytosis X","type":"exact"},{"name":"letterer-Siwe disease involving intra-abdominal lymph nodes","type":"exact"},{"name":"letterer-Siwe disease involving intrapelvic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease involving intrathoracic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of axilla and upper limb","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of head, face and neck","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of head, face, and neck","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of inguinal region and lower limb","type":"exact"},{"name":"letterer-Siwe disease involving lymph nodes of multiple sites","type":"exact"},{"name":"letterer-Siwe disease involving spleen","type":"exact"},{"name":"letterer-Siwe disease of intra-abdominal lymph nodes","type":"exact"},{"name":"letterer-Siwe disease of intrapelvic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease of intrathoracic lymph nodes","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of axilla and upper limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of axilla and/or upper limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of head, face and neck","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of head, face and/or neck","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of inguinal region amd/or lower limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of inguinal region and lower limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of inguinal region and/or lower limb","type":"exact"},{"name":"letterer-Siwe disease of lymph nodes of multiple sites","type":"exact"},{"name":"letterer-Siwe disease of spleen","type":"exact"}],"termid":"MONDO:0018310","xrefs":{"Monarch":{"xref_id":"0018310"}}}


id: GO:0046046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TTP, ribosylthymine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TTP metabolic process","synonyms":[{"name":"TTP metabolism","type":"exact"}],"termid":"GO:0046046"}


id: MONDO:0009519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifocal, multisystem form of Langerhans-cell histiocytosis. There is involvement of multiple organ systems including the bones, skin, liver, spleen, and lymph nodes. Patients are usually infants presenting with fever, hepatosplenomegaly, lymphadenopathy, bone and skin lesions, and pancytopenia.","definition_xrefs":["NCIT:C3160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to childhood","termid":"MONDO:0017025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"letterer-Siwe disease","secondary_identifiers":["OMIM:246400","icd11.foundation:1827474596","ICDO:9754/3","MEDGEN:7311","UMLS:C0023381","Orphanet:99870","MedDRA:10024265"],"synonyms":[{"name":"L-S disease","type":"related"},{"name":"acute and disseminated Langerhans cell histiocytosis","type":"exact"},{"name":"acute disseminated Langerhans cell histiocytosis","type":"exact"},{"name":"histiocytosis X, acute disseminated","type":"related"},{"name":"letterer-Siwe disease","type":"exact"},{"name":"multifocal multisystem Langerhans cell histiocytosis","type":"exact"}],"termid":"MONDO:0009519","xrefs":{"Monarch":{"xref_id":"0009519"}}}


id: PBO:0061512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 2","termid":"PBO:0061512"}


id: GO:0101018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of firing from a late origin of replication involved in mitotic DNA replication.","definition_xrefs":["PMID:26436827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation from late origin","termid":"GO:0101017"},{"relation_name":"is_a","term_name":"negative regulation of mitotic DNA replication initiation","termid":"GO:1903467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"negative regulation of late replication origin firing","type":"exact"}],"termid":"GO:0101018"}


id: MONDO:0020016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare neurologic disease with psychiatric involvement (obsolete MONDO:0020016)","secondary_identifiers":["Orphanet:98033"],"termid":"MONDO:0020016","xrefs":{"Monarch":{"xref_id":"0020016"}}}


id: PBO:0090674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex subunit Ufd1","termid":"PBO:0090674"}


id: PBO:0066866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 166","termid":"PBO:0066866"}


id: MONDO:0005770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herpes simplex infection of the genitals, most commonly caused by the herpes simplex-2 virus.","definition_xrefs":["NCIT:C14364"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"viral sexually transmitted disease","termid":"MONDO:0021682"},{"relation_name":"is_a","term_name":"disease arising from reactivation of latent virus","termid":"MONDO:0100330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genital herpes","secondary_identifiers":["EFO:0007282","ICD9:054.10","ICD9:054.1","ICD9:054.19","DOID:8704","MEDGEN:42436","MESH:D006558","UMLS:C0019342","SCTID:33839006"],"synonyms":[{"name":"genital herpes simplex","type":"exact"},{"name":"herpes genitalia","type":"exact"},{"name":"herpes genitalis","type":"exact"},{"name":"venereal herpes","type":"exact"},{"name":"virus-genital herpes","type":"exact"}],"termid":"MONDO:0005770","xrefs":{"Monarch":{"xref_id":"0005770"}}}


id: GO:1902343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltose transport.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:23770568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltose transport","termid":"GO:1902343"}


id: MONDO:0003352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the colon. Representative examples include angiosarcoma, Kaposi sarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C5495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon sarcoma","secondary_identifiers":["MEDGEN:272493","UMLS:C1333098","DOID:5260"],"synonyms":[{"name":"colon sarcoma","type":"exact"},{"name":"colonic sarcoma","type":"exact"},{"name":"sarcoma of colon","type":"exact"},{"name":"sarcoma of the colon","type":"exact"}],"termid":"MONDO:0003352","xrefs":{"Monarch":{"xref_id":"0003352"}}}


id: MONDO:0004801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral hypoactive labyrinth","secondary_identifiers":["UMLS:C0155517","ICD9:386.53","DOID:9496","MEDGEN:510003"],"termid":"MONDO:0004801","xrefs":{"Monarch":{"xref_id":"0004801"}}}


id: GO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the endohydrolysis of (1->4)-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.151-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucanohydrolase activity","type":"broad"},{"name":"XEG","type":"related"},{"name":"XH","type":"related"},{"name":"[(1->6)-beta-D-xylo]-(1->4)-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"xyloglucan endo-beta-1,4-glucanase activity","type":"related"},{"name":"xyloglucanase activity","type":"related"},{"name":"xyloglucanendohydrolase activity","type":"related"}],"termid":"GO:0033946"}


id: PBO:0030388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology","termid":"PBO:0030388"}


id: MONDO:0005984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatological pruritic lesion in the feet, caused by Trichophyton rubrum, T. mentagrophytes, or Epidermophyton floccosum.","definition_xrefs":["MESH:D014008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea pedis","secondary_identifiers":["EFO:0007512","ICD10CM:B35.3","DOID:12403","MEDGEN:52759","ICD9:110.4","SCTID:6020002","UMLS:C0040259"],"synonyms":[{"name":"athlete's foot","type":"exact"},{"name":"dermatophytosis of foot","type":"exact"},{"name":"dermatophytosis of pes","type":"exact"},{"name":"pes dermatophytosis","type":"exact"},{"name":"ringworm of foot","type":"related"}],"termid":"MONDO:0005984","xrefs":{"Monarch":{"xref_id":"0005984"}}}


id: GO:0030931
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four different subunits that possesses ADPG pyrophosphorylase activity. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"heterotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030931"}


id: PBO:0064515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 2","termid":"PBO:0064515"}


id: MONDO:0025494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by outbreaks of late term abortions, high numbers of stillbirths and mummified or weak newborn piglets, and respiratory disease in young unweaned and weaned pigs. It is caused by porcine respiratory and reproductive syndrome virus. (Radostits et al., Veterinary Medicine, 8th ed, p1048)","definition_xrefs":["MESH:D019318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine reproductive and respiratory syndrome","synonyms":[{"name":"PRRS","type":"exact"},{"name":"blue eared pig disease","type":"exact"},{"name":"blue-eared pig disease","type":"exact"},{"name":"mystery swine disease","type":"exact"},{"name":"pig disease, blue-eared","type":"exact"},{"name":"porcine epidemic abortion and respiratory syndrome","type":"exact"},{"name":"swine disease, mystery","type":"related"},{"name":"swine infertility and respiratory syndrome","type":"exact"}],"termid":"MONDO:0025494","xrefs":{"Monarch":{"xref_id":"0025494"}}}


id: PBO:0049252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone regulated TBC protein 1","termid":"PBO:0049252"}


id: MOD:00236
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(ADP-ribosyl)-L-asparagine.","definition_xrefs":["PubMed:15842200","Unimod:213#N","PubMed:2498316","RESID:AA0231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4-(ADP-ribosyl)-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)-4-oxobutanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"MOD_RES ADP-ribosylasparagine","type":"exact"},{"name":"N4-(ADP-ribosyl)-L-asparagine","type":"exact"},{"name":"N4-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-asparagine","type":"exact"},{"name":"N4-alpha-D-ribofuranosyl-L-asparagine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:00236"}


id: GO:0040020
data:
  {"annotated_genes":["SJAG_01330","SJAG_00266","SJAG_04259","SJAG_02712","SJAG_03327","SJAG_04287","SJAG_01082","SJAG_03438","SJAG_00364","SJAG_01680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97270],"is_not":false,"summary":null,"term":"GO:0040020"},{"annotations":[108283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[114800,106637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[89400,116361,106934,114564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[108286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[114092],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[89402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[101659],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes.","definition_xrefs":["GOC:ma","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_02712":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiosis","type":"broad"}],"termid":"GO:0040020","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0040020":null,"GO:0045128":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: MONDO:0016598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital secondary polycythemia","termid":"MONDO:0016540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive secondary polycythemia not associated with VHL gene","secondary_identifiers":["Orphanet:247378","GARD:20658"],"synonyms":[{"name":"autosomal recessive secondary erythrocytosis not associated with VHL gene","type":"exact"},{"name":"autosomal recessive secondary erythrocytosis, non-Chuvash type","type":"exact"},{"name":"autosomal recessive secondary polycythemia, non-Chuvash type","type":"exact"}],"termid":"MONDO:0016598","xrefs":{"Monarch":{"xref_id":"0016598"}}}


id: MONDO:0957560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, noise-induced, susceptibility to","secondary_identifiers":["OMIM:613035","MEDGEN:414426","UMLS:C2751629"],"termid":"MONDO:0957560","xrefs":{"Monarch":{"xref_id":"0957560"}}}


id: SO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A helix is a secondary_structure conformation where the peptide backbone forms a coil.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"peptide_helix","secondary_identifiers":["BS:00152"],"synonyms":[{"name":"helix","type":"related"}],"termid":"SO:0001114"}


id: SO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant in the genetic material inherited from the father.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal_variant","synonyms":[{"name":"paternal variant","type":"exact"}],"termid":"SO:0001776"}


id: GO:0019791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete FAT10 hydrolase activity (obsolete GO:0019791)","synonyms":[{"name":"FAT10 hydrolase activity","type":"exact"}],"termid":"GO:0019791"}


id: PBO:0029084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_terbinafine","termid":"PBO:0029084"}


id: GO:1900201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of spread of virus in host, cell to cell (obsolete GO:1900201)","synonyms":[{"name":"regulation of cell to cell spread of virus within host","type":"exact"},{"name":"regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"regulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900201"}


id: PBO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Gef2","termid":"PBO:0000349"}


id: PBO:0055022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2437","termid":"PBO:0055022"}


id: PBO:0083989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent disulfide oxidoreductase; hydroperoxide and superoxide-radical responsive, heat-stable, with active site cysteine pair; protects cells from oxidative damage; GRX1 has a paralog, GRX2, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0083989"}


id: PBO:0082743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling; acetylated (K25) by Gcn5p, altering replication stress tolerance; contains tandem bromodomains that recognize histone H3 acetylated on K14 (H3K14ac) by Gcn5p","termid":"PBO:0082743"}


id: MONDO:0100551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder related to biallelic variants in AFG2B and characterized by a spectrum of intellectual disability, hearing loss, and motor features including spasticity, dystonia, and/or hypotonia. Other phenotypic features commonly reported with the neurodevelopmental presentation include spasticity, focal or generalized epilepsy, and microcephaly.","direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"AFG2B-related complex neurodevelopmental disorder with motor features and hearing loss","synonyms":[{"name":"AFG2B-related complex neurodevelopmental disorder with motor features and hearing loss","type":"exact"},{"name":"SPATA5L1-related complex neurodevelopmental disorder with motor features and hearing loss","type":"exact"}],"termid":"MONDO:0100551","xrefs":{"Monarch":{"xref_id":"0100551"}}}


id: RO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is transcribed from y if and only if x is synthesized from template y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"RO:0002510"}


id: PBO:0088668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial polynucleotide adenylyltransferase Atp25","termid":"PBO:0088668"}


id: PBO:0060374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOZ3 antisense RNA 1","termid":"PBO:0060374"}


id: MONDO:0015330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete overgrowth/obesity syndrome (obsolete MONDO:0015330)","secondary_identifiers":["Orphanet:139024"],"termid":"MONDO:0015330","xrefs":{"Monarch":{"xref_id":"0015330"}}}


id: PBO:0067516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 657, pseudogene","termid":"PBO:0067516"}


id: GO:0033061
data:
  {"annotated_genes":["SJAG_01708","SJAG_00757","SJAG_03221","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033063"},{"annotations":[78910,93013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033065"},{"annotations":[110607,107972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032798"}]},"cv_name":"cellular_component","definition":"A protein complex containing accessory proteins which bind a recombinase (e.g. Rad51) and bind single-stranded DNA (ssDNA), and promote nucleation of the recombinase onto ssDNA through facilitating recombinase-RPA exchange.","definition_xrefs":["GOC:mah","InterPro:IPR003488","PMID:12912992","GOC:vw","PMID:32414915","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01708":null,"SJAG_02708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA recombinase mediator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033061","terms_by_termid":{"GO:0032798":null,"GO:0033063":null,"GO:0033065":null}}


id: PBO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctf18 RFC-like complex subunit Dcc1","termid":"PBO:0000348"}


id: PBO:0055719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMLN antisense RNA 1","termid":"PBO:0055719"}


id: GO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + taurolithocholate = adenosine 3',5'-bisphosphate + taurolithocholate sulfate.","definition_xrefs":["MetaCyc:BILE-SALT-SULFOTRANSFERASE-RXN","EC:2.8.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"bile-salt sulfotransferase activity","secondary_identifiers":["RHEA:14013"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycolithocholate sulfotransferase activity","type":"related"},{"name":"BAST I activity","type":"narrow"},{"name":"bile acid sulfotransferase I activity","type":"narrow"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"related"},{"name":"bile salt:3'phosphoadenosine-5'-phosphosulfate:sulfotransferase activity","type":"related"},{"name":"bile-salt sulphotransferase activity","type":"exact"},{"name":"glycolithocholate sulfotransferase activity","type":"narrow"}],"termid":"GO:0047704"}


id: GO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UMP + (1,4)-alpha-D-glucosyl(n)-glucose-1-phosphate.","definition_xrefs":["PMID:21356517","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glycogen synthase activity, transferring glucose-1-phosphate","secondary_identifiers":["Reactome:R-HSA-3781024","Reactome:R-HSA-3780994"],"termid":"GO:0061547"}


id: PBO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog3 (predicted)","termid":"PBO:0004928"}


id: GO:0046793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus activates the frequency, rate or extent of phosphorylation of host RNA polymerase II.","definition_xrefs":["PMID:7637000"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of phosphorylation of host RNA polymerase II (obsolete GO:0046793)","synonyms":[{"name":"induction by virus of modification of host RNA polymerase II","type":"broad"},{"name":"virus-induced modification of host RNA polymerase II","type":"exact"}],"termid":"GO:0046793"}


id: SO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing at least one unique origin of replication and a unique termination site.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replicon","secondary_identifiers":["http://en.wikipedia.org/wiki/Replicon_(genetics)"],"termid":"SO:0001235"}


id: PBO:0070411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA3 pseudogene 1","termid":"PBO:0070411"}


id: GO:1902983
data:
  {"annotated_genes":["SJAG_03780","SJAG_01823","SJAG_00729","SJAG_04190","SJAG_03495","SJAG_02818","SJAG_02908","SJAG_00814","SJAG_00863","SJAG_00874","SJAG_01010","SJAG_02182","SJAG_04877","SJAG_00272","SJAG_02667","SJAG_04879","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70684,110253,112583,112823,113874,115709],"is_not":false,"summary":null,"term":"GO:1902983"},{"annotations":[118488,104543,103144,105257,95571,109421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[95572,105258,94302,95603,107666,104544,89915,107303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_01010":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"DNA strand elongation involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA strand elongation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902983","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PR:Q9UUI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.12c","synonyms":[{"name":"Spom972h-shf1","type":"exact"}],"termid":"PR:Q9UUI2"}


id: PBO:0070782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 12","termid":"PBO:0070782"}


id: PATO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000079 absolute rhythym (obsolete PATO:0000079)","termid":"PATO:0000079"}


id: MONDO:0015364
data:
  {"annotated_genes":["SJAG_04178","SJAG_00773","SJAG_02016","SJAG_02305","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[87297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[87390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[85434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024309"},{"annotations":[86167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013634"},{"annotations":[87529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","definition":"An instance of sensory peripheral neuropathy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory peripheral neuropathy","termid":"MONDO:0002321"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_02016":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:14355","DOID:0050548","MESH:D009477","Orphanet:140471","GARD:12688","OMIMPS:162400","ICD9:356.2","icd11.foundation:1091217288","NCIT:C125386","SCTID:11442006","UMLS:C0027889"],"synonyms":[{"name":"CIP","type":"exact"},{"name":"HSAN","type":"exact"},{"name":"congenital insensitivity to pain","type":"exact"},{"name":"congenital pain insensitivity","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"hereditary sensory autonomic neuropathy","type":"related"},{"name":"hereditary sensory neuropathy","type":"exact"},{"name":"hereditary sensory peripheral neuropathy","type":"exact"},{"name":"indifference to pain, Congenital, autosomal recessive","type":"exact"}],"termid":"MONDO:0015364","terms_by_termid":{"MONDO:0008086":null,"MONDO:0010378":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013634":null,"MONDO:0024309":null},"xrefs":{"Monarch":{"xref_id":"0015364"}}}


id: GO:0071640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"regulation of CCL3 production","type":"exact"},{"name":"regulation of MIP-1a production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071640"}


id: FYPO:0004548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"normal protein kinase activity during cellular response to HU","type":"exact"},{"name":"normal protein kinase activity in response to hydroxyurea","type":"related"}],"termid":"FYPO:0004548"}


id: PBO:0056088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ly1 antibody reactive","termid":"PBO:0056088"}


id: PBO:0117381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSH2D and RAB8A antisense RNA 1","termid":"PBO:0117381"}


id: MONDO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic hypothalamic or pituitary disease (obsolete MONDO:0015968)","secondary_identifiers":["Orphanet:183628"],"termid":"MONDO:0015968","xrefs":{"Monarch":{"xref_id":"0015968"}}}


id: PBO:0005674
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.7.3.3","termid":"PBO:0005674"}


id: PBO:0029205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_activation_of_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0029205"}


id: GO:1901736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"(R)-mevalonic acid metabolic process","termid":"GO:1901735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"(R)-mevalonic acid catabolic process","synonyms":[{"name":"(R)-mevalonate breakdown","type":"exact"},{"name":"(R)-mevalonate catabolism","type":"exact"},{"name":"(R)-mevalonate degradation","type":"exact"},{"name":"(R)-mevalonic acid breakdown","type":"exact"},{"name":"(R)-mevalonic acid catabolism","type":"exact"},{"name":"(R)-mevalonic acid degradation","type":"exact"}],"termid":"GO:1901736"}


id: GO:0007088
data:
  {"annotated_genes":["SJAG_02058","SJAG_04999","SJAG_03681","SJAG_03353","SJAG_02169","SJAG_01082","SJAG_04699","SJAG_01805","SJAG_01330","SJAG_02380","SJAG_00883","SJAG_04259","SJAG_04126","SJAG_04968","SJAG_01837","SJAG_03048","SJAG_02336","SJAG_03126","SJAG_02498","SJAG_01679","SJAG_04884","SJAG_02451","SJAG_04573","SJAG_01297","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111239],"is_not":false,"summary":null,"term":"GO:0007088"},{"annotations":[114087,99914,104211,116202,91061,107548,108568,112269,114574],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[114803,110216,99758,106639,115858,102117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[94536],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116975],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[94144,98025,115072,111683,100463,102427,102698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02058":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitosis","type":"exact"}],"termid":"GO:0007088","terms_by_termid":{"GO:0007088":null,"GO:0007094":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0017399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Right temporal lobar atrophy (RTLA) is an anatomic variant of frontotemporal dementia (FTD), characterized by behavioral dysfunction, personality changes, episodic memory loss, and prosopagnosia; attributable to an asymmetrical predominantly right-sided, frontotemporal atrophy.","definition_xrefs":["Orphanet:293848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semantic dementia","termid":"MONDO:0010857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia, right temporal atrophy variant","secondary_identifiers":["SCTID:716667005"],"synonyms":[{"name":"RTLA","type":"exact"},{"name":"rvFTD","type":"exact"}],"termid":"MONDO:0017399","xrefs":{"Monarch":{"xref_id":"0017399"}}}


id: MONDO:0032620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 15","secondary_identifiers":["OMIM:618237","UMLS:C4748778","DOID:0112077","GARD:16323","MEDGEN:1648320"],"synonyms":[{"name":"MC1DN15","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 15","type":"related"}],"termid":"MONDO:0032620","xrefs":{"Monarch":{"xref_id":"0032620"}}}


id: GO:1902078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["PMID:20711475","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"},{"relation_name":"is_a","term_name":"positive regulation of motor neuron migration","termid":"GO:1905485"},{"relation_name":"positively_regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral motor column neuron migration","synonyms":[{"name":"activation of lateral motor column neuron migration","type":"narrow"},{"name":"up regulation of lateral motor column neuron migration","type":"exact"},{"name":"up-regulation of lateral motor column neuron migration","type":"exact"},{"name":"upregulation of lateral motor column neuron migration","type":"exact"}],"termid":"GO:1902078"}


id: FYPO:0005226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell","type":"exact"},{"name":"decreased ubiquitinated protein level during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell","type":"exact"}],"termid":"FYPO:0005226"}


id: PBO:0085527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085527"}


id: PBO:0065698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 3","termid":"PBO:0065698"}


id: PBO:0067547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 693, pseudogene","termid":"PBO:0067547"}


id: PBO:0045800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin receptor type A","termid":"PBO:0045800"}


id: PBO:0082725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ribosome quality control complex (RQC); RQC (Rqc1p-Rkr1p-Rqc2p-Cdc48p-Npl4p-Ufd1p) is a ribosome-bound complex required for the degradation of polypeptides arising from stalled translation; required along with Rkr1p for recruitment of the Cdc48p-Npl4p-Ufd1p AAA ATPase complex to the RQC","termid":"PBO:0082725"}


id: GO:0009840
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Clp endopeptidase complex located in the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase Clp complex","termid":"GO:0009368"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplastic endopeptidase Clp complex","termid":"GO:0009840"}


id: GO:0042137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining a neurotransmitter such that it is separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of neurotransmitter (obsolete GO:0042137)","synonyms":[{"name":"neurotransmitter biosynthesis and storage","type":"related"},{"name":"neurotransmitter biosynthetic process and storage","type":"related"},{"name":"neurotransmitter retention","type":"exact"},{"name":"neurotransmitter sequestration","type":"exact"},{"name":"neurotransmitter storage","type":"exact"},{"name":"retention of neurotransmitter","type":"exact"},{"name":"sequestration of neurotransmitter","type":"exact"},{"name":"storage of neurotransmitter","type":"exact"}],"termid":"GO:0042137"}


id: MONDO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibular aplasia-tibial campomelia-oligosyndactyly syndrome (obsolete MONDO:0018819)","termid":"MONDO:0018819","xrefs":{"Monarch":{"xref_id":"0018819"}}}


id: PR:O59747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.12c","synonyms":[{"name":"Spom972h-pdf1","type":"exact"}],"termid":"PR:O59747"}


id: RO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially adjacent to y iff x and y do not overlap and if there are no base units intervening between x and y","direct_ancestors":[{"relation_name":"is_a","term_name":"does_not_overlap_sequence_of","termid":"RO:0002527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequentially_adjacent_to","termid":"RO:0002515"}


id: PBO:0068409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNFT1 divergent transcript","termid":"PBO:0068409"}


id: PBO:0090454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Cki2","termid":"PBO:0090454"}


id: PBO:0064621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU6F2 antisense RNA 1","termid":"PBO:0064621"}


id: GO:1904103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:dph","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"}


id: FYPO:0005910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to endoplasmic reticulum stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased protein accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"decreased protein level during cellular response to ER stress","type":"exact"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0005910"}


id: GO:1990435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the upper end of a stereocilia tip link that provides the anchor in the stereocilia membrane on the side of the stereocilium where the tip link ends.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"upper tip-link density","synonyms":[{"name":"UTLD","type":"exact"}],"termid":"GO:1990435"}


id: MONDO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the portion of the urethra that is close to the bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"female urethral cancer","termid":"MONDO:0004203"},{"relation_name":"is_a","term_name":"urethra cancer","termid":"MONDO:0004192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"posterior urethra cancer","secondary_identifiers":["NCIT:C7640","UMLS:C0279931","DOID:7488","MEDGEN:124676"],"synonyms":[{"name":"malignant neoplasm of posterior urethra","type":"exact"},{"name":"malignant neoplasm of the posterior urethra","type":"exact"},{"name":"malignant tumor of posterior urethra","type":"exact"},{"name":"malignant tumor of the posterior urethra","type":"exact"},{"name":"malignant tumour of posterior urethra","type":"exact"},{"name":"malignant tumour of the posterior urethra","type":"exact"},{"name":"posterior urethra malignant neoplasm","type":"exact"},{"name":"posterior urethra malignant tumor","type":"exact"},{"name":"posterior urethra malignant tumour","type":"exact"},{"name":"posterior urethral cancer","type":"exact"},{"name":"posterior urethral malignant neoplasm","type":"exact"},{"name":"posterior urethral malignant tumor","type":"exact"},{"name":"posterior urethral malignant tumour","type":"exact"}],"termid":"MONDO:0004240","xrefs":{"Monarch":{"xref_id":"0004240"}}}


id: PBO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antiparallel microtubule cross-linking factor Ase1","termid":"PBO:0001220"}


id: PBO:0046332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX1 antisense RNA 2","termid":"PBO:0046332"}


id: MONDO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of perichondritis of auricle.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute otitis externa","termid":"MONDO:0001051"},{"relation_name":"is_a","term_name":"perichondritis of auricle","termid":"MONDO:0002246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute perichondritis of pinna","secondary_identifiers":["SCTID:45855004","ICD9:380.01","DOID:221","MEDGEN:509946","UMLS:C0155390"],"synonyms":[{"name":"acute perichondritis of auricle","type":"exact"},{"name":"perichondritis of auricle, acute","type":"exact"}],"termid":"MONDO:0002240","xrefs":{"Monarch":{"xref_id":"0002240"}}}


id: GO:0052581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6R)-isoperitenone + H+ + NADPH = (2R,5R)-isopulegone + NADP+.","definition_xrefs":["RHEA:25649","EC:1.3.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(-)-isopiperitenone reductase activity","secondary_identifiers":["MetaCyc:RXN-5161","KEGG_REACTION:R06417"],"synonyms":[{"name":"(+)-cis-isopulegone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052581"}


id: GO:0003881
data:
  {"annotated_genes":["SJAG_00999"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76946],"is_not":false,"summary":null,"term":"GO:0003881"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol + CDP-diacylglycerol = 1-phosphatidyl-1D-myo-inositol + CMP + H+.","definition_xrefs":["EC:2.7.8.11","RHEA:11580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01802","MetaCyc:2.7.8.11-RXN","Reactome:R-HSA-1482976"],"synonyms":[{"name":"CDP diglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"CDP-DG:inositol transferase activity","type":"related"},{"name":"CDP-diacylglycerol--inositol phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:myo-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:myo-inositol-3-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-inositol transferase activity","type":"related"},{"name":"CDP-diglyceride:inositol transferase activity","type":"related"},{"name":"CDPdiacylglycerol-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:myo-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphodiglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-inositol transferase activity","type":"related"},{"name":"phosphatidylinositol synthase activity","type":"exact"}],"termid":"GO:0003881","terms_by_termid":{"GO:0003881":null}}


id: GO:0140797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 17)= histone H3 L-citrullyl (position 17) + NH4+, resulting in histone H3 citrullination at position 17.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0140096","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"histone H3R17 arginine deiminase activity","synonyms":[{"name":"H3-R17 citrullination","type":"exact"},{"name":"histone H3-R17 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R17 specific)","type":"exact"}],"termid":"GO:0140797"}


id: PBO:0077464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A","termid":"PBO:0077464"}


id: PBO:0090668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR domain protein, DNAJC7 family","termid":"PBO:0090668"}


id: GO:1902161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11420311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"regulation of cyclic nucleotide-gated ion channel activity","termid":"GO:1902159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"activation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide-gated ion channel activity","type":"narrow"},{"name":"positive regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"positive regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"positive regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide-gated ion channel activity","type":"exact"}],"termid":"GO:1902161"}


id: GO:0043488
data:
  {"annotated_genes":["SJAG_00854","SJAG_03883","SJAG_02808","SJAG_01944","SJAG_02622","SJAG_04321","SJAG_03597","SJAG_00966","SJAG_01696","SJAG_02383","SJAG_04407","SJAG_03283","SJAG_00343","SJAG_05014","SJAG_03886","SJAG_01625","SJAG_01521","SJAG_04350","SJAG_01053","SJAG_04118","SJAG_00391","SJAG_02036","SJAG_03876","SJAG_01910","SJAG_00285","SJAG_04006","SJAG_02213","SJAG_01191","SJAG_04824","SJAG_02370","SJAG_01818","SJAG_16457","SJAG_03179","SJAG_03696","SJAG_00759","SJAG_05322","SJAG_02239","SJAG_04946","SJAG_04880","SJAG_03157","SJAG_05010","SJAG_00670","SJAG_02573","SJAG_00797","SJAG_04153","SJAG_04818","SJAG_02540","SJAG_04084","SJAG_04825","SJAG_03745","SJAG_05694","SJAG_00686","SJAG_03113"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88748],"is_not":false,"summary":null,"term":"GO:0043488"},{"annotations":[118615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[90530,79150,79087,100417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[58573,76143,112312,74681,77930,80026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[118413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[71035,89826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[92008],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[93418,102402,96248,104720,116187,106786,107772,92586,115747,105585,118603,97574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[76961,79881,98381,115448,100254,60179,98467,70883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[74127,80064,95840,90127,70709,91121,77941,92841,116903,92939,79303,115961,75883,94671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[92009],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[117529,91122,66775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[90533,91863,90141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428359","Reactome:R-HSA-450531"],"termid":"GO:0043488","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0060212":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:1990074":null,"GO:2000815":null}}


id: PBO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase synthase peripheral stalk assembly factor Ina17 (predicted)","termid":"PBO:0036468"}


id: SO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid sequence that is integrated within the host chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrated_plasmid","synonyms":[{"name":"integrated plasmid","type":"exact"}],"termid":"SO:0001040"}


id: GO:0045135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: polysaccharides containing beta-D-mannuronate residues = oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl end. This reaction is the eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.","definition_xrefs":["EC:4.2.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"poly(beta-D-mannuronate) lyase activity","secondary_identifiers":["MetaCyc:4.2.2.3-RXN"],"synonyms":[{"name":"alginase I","type":"related"},{"name":"alginase activity","type":"related"},{"name":"alginate lyase I activity","type":"narrow"},{"name":"alginate lyase activity","type":"related"},{"name":"poly(beta-D-1,4-mannuronide) lyase activity","type":"related"},{"name":"poly(mana) alginate lyase activity","type":"narrow"}],"termid":"GO:0045135"}


id: PBO:0055028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2443","termid":"PBO:0055028"}


id: MONDO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solid, unencapsulated tumor of the kidney composed of spindle mesenchymal cells that resemble fibroblasts or muscle cells. The homogeneous mass typically extends into the renal parenchyma and replaces most of the kidney. In most cases, mesoblastic nephroma is benign and occurs in the fetus or newborn, and rarely in the older child or the adult.","definition_xrefs":["MESH:D018201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"mesoblastic nephroma","secondary_identifiers":["UMLS:C0206628","MEDGEN:64620","DOID:4772","EFO:0007365","ICD9:236.99","SCTID:307604008"],"synonyms":[{"name":"mesoblastic nephroma","type":"exact"},{"name":"mesoblastic nephroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003130","xrefs":{"Monarch":{"xref_id":"0003130"}}}


id: GO:0032880
data:
  {"annotated_genes":["SJAG_01311","SJAG_03602","SJAG_00883","SJAG_04464","SJAG_02592","SJAG_04312","SJAG_03048","SJAG_04509","SJAG_04597","SJAG_04343","SJAG_03970","SJAG_02645","SJAG_01084","SJAG_01373","SJAG_01805","SJAG_02392","SJAG_03453","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[106137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[91301,96186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[94745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[107549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[114774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[96187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[100763,102171,111324,94146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[94708,91188,102702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[98756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[88245,92358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[108270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01084":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903827"],"synonyms":[{"name":"regulation of cellular protein localisation","type":"exact"},{"name":"regulation of cellular protein localization","type":"exact"},{"name":"regulation of protein localisation","type":"exact"}],"termid":"GO:0032880","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0120047":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1903067":null,"GO:1903077":null,"GO:1905391":null}}


id: PBO:0073057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1","termid":"PBO:0073057"}


id: PBO:0075734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 2","termid":"PBO:0075734"}


id: PBO:0011448
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in metzoa","termid":"PBO:0011448"}


id: PBO:0075774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 2","termid":"PBO:0075774"}


id: PBO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc4/Cut20","termid":"PBO:0017753"}


id: PBO:0052447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 4","termid":"PBO:0052447"}


id: PBO:0059979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 24","termid":"PBO:0059979"}


id: PR:P28189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11885:SF1","PRO:DNx","OMA:SCHPO01149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.07c","secondary_identifiers":["UniProtKB:P28189"],"synonyms":[{"name":"Spom972h-RPS13","type":"exact"}],"termid":"PR:P28189"}


id: GO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa bonds in small molecule substrates. Highly selective action to release kallidin (lysyl-bradykinin) from kininogen involves hydrolysis of Met-Xaa or Leu-Xaa. The rat enzyme is unusual in liberating bradykinin directly from autologous kininogens by cleavage at two Arg-Xaa bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue kallikrein activity (obsolete GO:0004293)","synonyms":[{"name":"bradykininogenase","type":"broad"},{"name":"callicrein","type":"related"},{"name":"depot-padutin","type":"related"},{"name":"dilminal D","type":"related"},{"name":"glandular kallikrein activity","type":"related"},{"name":"glumorin","type":"related"},{"name":"kallidinogenase","type":"broad"},{"name":"kidney kallikrein","type":"related"},{"name":"kininogenase","type":"broad"},{"name":"kininogenin activity","type":"related"},{"name":"onokrein P","type":"related"},{"name":"padreatin","type":"related"},{"name":"padutin","type":"related"},{"name":"pancreatic kallikrein","type":"related"},{"name":"salivary kallikrein","type":"related"},{"name":"submandibular kallikrein","type":"related"},{"name":"submaxillary kallikrein","type":"related"},{"name":"tissue kallikrein activity","type":"exact"},{"name":"urinary kallikrein","type":"related"},{"name":"urokallikrein","type":"related"}],"termid":"GO:0004293"}


id: MONDO:0700194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a chicken.","definition_xrefs":["NCIT:C135004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken lymphoma","termid":"MONDO:0700194","xrefs":{"Monarch":{"xref_id":"0700194"}}}


id: MONDO:0019047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of hearing loss that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare deafness (obsolete MONDO:0019047)","secondary_identifiers":["Orphanet:68361","NCIT:C36194"],"synonyms":[{"name":"complete deafness","type":"exact"},{"name":"rare hearing loss","type":"exact"},{"name":"total deafness","type":"exact"}],"termid":"MONDO:0019047","xrefs":{"Monarch":{"xref_id":"0019047"}}}


id: GO:0008204
data:
  {"annotated_genes":["SJAG_03598","SJAG_02044","SJAG_00770","SJAG_04790","SJAG_04270","SJAG_03249","SJAG_04217","SJAG_03715","SJAG_03929","SJAG_03750","SJAG_00158","SJAG_02855","SJAG_04499","SJAG_00370","SJAG_03235","SJAG_03024","SJAG_02104","SJAG_04059","SJAG_02068","SJAG_02719","SJAG_00453","SJAG_04018","SJAG_04049","SJAG_03531","SJAG_00413","SJAG_01307","SJAG_03509","SJAG_02982","SJAG_03018","SJAG_01474","SJAG_00624","SJAG_00717","SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76546,80632,103672,104315,115376],"is_not":false,"summary":null,"term":"GO:0008204"},{"annotations":[89999,94970,107845,70215,80301,80661,110395,72102,76621,116843,115535,109557,65936,88815,74692,71267,76594,77566,108158,71907,74334,73514,76536,80674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[94221],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[110160],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[106165,88905],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds. It is the most important of the D provitamins and is converted to vitamin D2 on irradiation with UV light.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"phytosteroid metabolic process","termid":"GO:0016128"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ergosterol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ergosterol metabolism","type":"exact"}],"termid":"GO:0008204","terms_by_termid":{"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: GO:1901312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901312)","synonyms":[{"name":"down regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down regulation of extracellular matrix protein production","type":"related"},{"name":"down regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"down-regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down-regulation of extracellular matrix protein production","type":"related"},{"name":"down-regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"downregulation of expression of extracellular matrix proteins","type":"exact"},{"name":"downregulation of extracellular matrix protein production","type":"related"},{"name":"downregulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"inhibition of expression of extracellular matrix proteins","type":"exact"},{"name":"inhibition of extracellular matrix protein production","type":"related"},{"name":"inhibition of gene expression involved in extracellular matrix organization","type":"narrow"},{"name":"negative regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"negative regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901312"}


id: PBO:0034508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_segregation","termid":"PBO:0034508"}


id: PBO:0067558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 711, pseudogene","termid":"PBO:0067558"}


id: PBO:0012026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in transcriptional regulation (predicted)","termid":"PBO:0012026"}


id: GO:0007570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent accumulation of genetic damage (obsolete GO:0007570)","synonyms":[{"name":"age dependent accumulation of genetic damage","type":"exact"}],"termid":"GO:0007570"}


id: PR:Q9UUH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metallophosphoesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00144","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.12","secondary_identifiers":["UniProtKB:Q9UUH0"],"synonyms":[{"name":"Spom972h-MPPE1","type":"exact"}],"termid":"PR:Q9UUH0"}


id: MONDO:0007896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute monoblastic leukemia (AML-M5), is one of the most common subtypes of acute myeloid leukemia (AML) that is either comprised of more than 80% of monoblasts (AML-M5a) or 30-80% monoblasts with (pro)monocytic differentiation (AML-M5b). AML-M5 presents with asthenia, pallor, fever, and dizziness. Specific features of AML-M5 include hyperleukocytosis, propensity for extramedullary infiltrates, coagulation abnormalities including disseminated intravascular coagulation and neurological disorders. Leukemia cutis and gingival infiltration can also be seen. A characteristic translocation observed in AML-M5 is t(9;11).","definition_xrefs":["Orphanet:514"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"monocytic leukemia","termid":"MONDO:0004600"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute monocytic leukemia","secondary_identifiers":["NCIT:C4861","icd11.foundation:517546180","ONCOTREE:AMOL","MEDGEN:7319","MedDRA:10059439","SCTID:413441006","ICD9:206.0","UMLS:C0023465","DOID:8864","CSP:2004-2820","NANDO:2200008","ICDO:9891/3","NANDO:2200009","GARD:525","MedDRA:10000871","OMIM:151380","EFO:0000221","MESH:D007948"],"synonyms":[{"name":"AML M5","type":"exact"},{"name":"AML-M5","type":"related"},{"name":"acute monoblastic leukaemia","type":"related"},{"name":"acute monoblastic leukaemia and acute monocytic leukaemia","type":"exact"},{"name":"acute monoblastic leukemia","type":"related"},{"name":"acute monoblastic leukemia and acute monocytic leukemia","type":"exact"},{"name":"acute monoblastic/monocytic leukaemia","type":"related"},{"name":"acute monoblastic/monocytic leukemia","type":"related"},{"name":"acute monocytic leukaemia (FAB M5B)","type":"exact"},{"name":"acute monocytic leukaemia (FAB M5b)","type":"exact"},{"name":"acute monocytic leukaemia without mention of remission","type":"exact"},{"name":"acute monocytic leukemia","type":"exact"},{"name":"acute monocytic leukemia (FAB M5B)","type":"exact"},{"name":"acute monocytic leukemia (FAB M5b)","type":"exact"},{"name":"acute monocytic leukemia without mention of remission","type":"exact"},{"name":"acute monocytic leukemia, FAB M5","type":"exact"},{"name":"acute monocytic leukemia, morphology","type":"exact"},{"name":"acute monocytic leukemia, morphology (morphologic abnormality)","type":"exact"},{"name":"acute myeloblastic leukaemia type 5","type":"related"},{"name":"acute myeloblastic leukemia type 5","type":"related"},{"name":"leukemia, acute monocytic","type":"related"},{"name":"leukemia, monocytic, malignant","type":"exact"},{"name":"monocytic leukaemia","type":"broad"},{"name":"monocytic leukemia","type":"broad"},{"name":"monocytic leukemia, acute","type":"exact"}],"termid":"MONDO:0007896","xrefs":{"Monarch":{"xref_id":"0007896"}}}


id: GO:0033876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + glycochenodeoxycholate = adenosine 3',5'-diphosphate + glycochenodeoxycholate 7-sulfate + H+.","definition_xrefs":["EC:2.8.2.34","RHEA:17689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"glycochenodeoxycholate sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.34-RXN","KEGG_REACTION:R07289"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycochenodeoxycholate 7-sulfotransferase activity","type":"related"},{"name":"BAST","type":"related"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"broad"},{"name":"bile acid:PAPS:sulfotransferase activity","type":"related"}],"termid":"GO:0033876"}


id: MONDO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric osteosarcoma","secondary_identifiers":["UMLS:C1332986","NANDO:2200048","MEDGEN:272464","DOID:3361","NCIT:C6585"],"synonyms":[{"name":"childhood osteogenic sarcoma","type":"exact"},{"name":"childhood osteosarcoma","type":"exact"},{"name":"childhood osteosarcoma (disease)","type":"exact"},{"name":"osteosarcoma","type":"broad"},{"name":"osteosarcoma (disease) of childhood","type":"exact"},{"name":"paediatric osteosarcoma (disease)","type":"exact"},{"name":"pediatric osteosarcoma","type":"exact"},{"name":"pediatric osteosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002623","xrefs":{"Monarch":{"xref_id":"0002623"}}}


id: PBO:0051502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of HORMAD1 1","termid":"PBO:0051502"}


id: PBO:0055202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2627","termid":"PBO:0055202"}


id: PBO:0082643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of nuclear aminoacylation-dependent tRNA export pathway; cytoplasmic; interacts with nuclear pore component Nup116p; copurifies with tRNA export receptors Los1p and Msn5p, as well as eIF-1a; required for activation of RAN GTPase Gsp1p and dissociation of receptor-tRNA-Gsp1p export complex; recruits Rna1p from cytoplasm to NPC, facilitates Rna1p activation of Gsp1p GTPase activity by enabling Rna1p to gain access to Gsp1p-GTP bound to export receptor tRNA complex","termid":"PBO:0082643"}


id: PATO:0000588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being a remnant structure from earlier development or evolution.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial","termid":"PATO:0000588"}


id: PBO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroid differentiation regulatory factor 1","termid":"PBO:0045803"}


id: PBO:0060276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYH9 divergent transcript","termid":"PBO:0060276"}


id: PBO:0091861
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS Binding Protein","termid":"PBO:0091861"}


id: MONDO:0024340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma arising from the retina.","definition_xrefs":["NCIT:C6956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"},{"relation_name":"is_a","term_name":"retina neoplasm","termid":"MONDO:0021231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal neuroblastoma","secondary_identifiers":["MEDGEN:1830429","UMLS:C5779888"],"synonyms":[{"name":"neuroblastoma of retina","type":"exact"},{"name":"neuroblastoma of the retina","type":"exact"},{"name":"retina neuroblastoma","type":"exact"},{"name":"retinal neuroblastoma","type":"exact"}],"termid":"MONDO:0024340","xrefs":{"Monarch":{"xref_id":"0024340"}}}


id: GO:0060865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand and contributing to the decrease in the rate or frequency of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signaling pathway (obsolete GO:0060865)","synonyms":[{"name":"negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0060865"}


id: PBO:0039220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member E2","termid":"PBO:0039220"}


id: PBO:0079900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit XI","termid":"PBO:0079900"}


id: PBO:0067113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 155, pseudogene","termid":"PBO:0067113"}


id: MOD:00762
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"biantennary (-2 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Biantennary (-2 galactose)","type":"related"},{"name":"Hex(3)HexNAc(4)","type":"related"}],"termid":"MOD:00762"}


id: PBO:0086307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with MTHFR activity in vitro; null mutant has no phenotype and is prototrophic for methionine; MET13 encodes major isozyme of methylenetetrahydrofolate reductase (MTHFR)","termid":"PBO:0086307"}


id: FYPO:0003662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via an error-free mechanism, such as homologous recombination or break-induced replication, is increased.","definition_xrefs":["PMID:10373582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased error-free double-strand break repair","synonyms":[{"name":"increased error-free double-strand break repair during mitotic cell cycle","type":"related"},{"name":"increased error-free double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003662"}


id: PBO:0068250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N2","termid":"PBO:0068250"}


id: FYPO:0008361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which integrated stress response signaling is normal  (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal integrated stress response signaling","synonyms":[{"name":"normal GAAC signaling","type":"exact"}],"termid":"FYPO:0008361"}


id: PATO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000673 temperature value (obsolete PATO:0000673)","termid":"PATO:0000673"}


id: FYPO:0002133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002131","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein-RNA interaction","synonyms":[{"name":"RNA binding abolished","type":"exact"},{"name":"abolished RNA binding","type":"exact"},{"name":"abolished RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002133"}


id: GO:0010397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pectic apiogalacturonan, characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues substituted with apiose and apiobiose (D-apiofuranosyl-beta-(1->3)-D-apiose) side chains via O-2 or O-3 links.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"apiogalacturonan metabolic process","synonyms":[{"name":"apiogalacturonan metabolism","type":"exact"}],"termid":"GO:0010397"}


id: PBO:0089563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Tsr2","termid":"PBO:0089563"}


id: PBO:0028657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex-dependent_proteasomal_ubiquitin-dependent_protein_catabolic_process","termid":"PBO:0028657"}


id: PR:P05511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized 91 kDa protein in cob intron (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.06","synonyms":[{"name":"Spom972h-SPMIT.06","type":"exact"}],"termid":"PR:P05511"}


id: PBO:0003176
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectable marker, amino acid auxotroph","termid":"PBO:0003176"}


id: MONDO:0008286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crossed polysyndactyly is a rare, genetic, congenital limb malformation disorder characterized by unilateral or bilateral postaxial polydactyly in the hands and preaxial polydactyly in the feet, associated with bilateral cutaneous syndactyly of first, second and third toes. Cutaneous syndactyly in hands has also been reported in some patients. There have been no further descriptions in the literature since 1994.","definition_xrefs":["Orphanet:2935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossed polysyndactyly","secondary_identifiers":["icd11.foundation:1884305247","UMLS:C1867999","MEDGEN:358112","MESH:C566773","OMIM:175690","GARD:1617"],"synonyms":[{"name":"crossed polydactyly","type":"exact"},{"name":"polysyndactyly, crossed","type":"related"}],"termid":"MONDO:0008286","xrefs":{"Monarch":{"xref_id":"0008286"}}}


id: GO:0036337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to a Fas receptor on the surface of the cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Fas is a death domain-containing member of the tumor necrosis factor receptor (TNFR) superfamily.","definition_xrefs":["Wikipedia:Fas_receptor","GOC:nhn","PMID:12040174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fas signaling pathway","synonyms":[{"name":"Apo-1 signaling pathway","type":"exact"},{"name":"CD95 signaling pathway","type":"exact"},{"name":"FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"Fas receptor signaling pathway","type":"exact"},{"name":"Fas-FasL signaling pathway","type":"narrow"},{"name":"FasL signaling pathway","type":"related"},{"name":"FasR signaling pathway","type":"exact"}],"termid":"GO:0036337"}


id: PBO:0114342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine family transmembrane transporter","termid":"PBO:0114342"}


id: PBO:0108990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin like 1","termid":"PBO:0108990"}


id: GO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + ATP + UDP-N-acetylmuramoyl-L-alanine = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate.","definition_xrefs":["RHEA:16429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanine-D-glutamate ligase activity","secondary_identifiers":["KEGG_REACTION:R02783","MetaCyc:UDP-NACMURALA-GLU-LIG-RXN","EC:6.3.2.9"],"synonyms":[{"name":"D-glutamate ligase activity","type":"related"},{"name":"D-glutamate-adding enzyme activity","type":"related"},{"name":"MurD synthetase activity","type":"related"},{"name":"UDP-Mur-NAC-L-Ala:D-Glu ligase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine:glutamate ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase activity","type":"related"}],"termid":"GO:0008764"}


id: GO:1900010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of corticotropin-releasing hormone receptor activity.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:18234674"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of corticotropin-releasing hormone receptor activity (obsolete GO:1900010)","synonyms":[{"name":"regulation of CRF receptor activity","type":"exact"},{"name":"regulation of CRH receptor activity","type":"exact"},{"name":"regulation of adrenocorticotropin-releasing hormone receptor activity","type":"exact"},{"name":"regulation of corticotropin-releasing factor receptor activity","type":"exact"}],"termid":"GO:1900010"}


id: PBO:0066161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2-type and C3HC4-type zinc finger containing 1","termid":"PBO:0066161"}


id: PBO:0078131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 12-2","termid":"PBO:0078131"}


id: PBO:0011526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel subunit/aldo-keto reductase (predicted)","termid":"PBO:0011526"}


id: GO:0034149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 5 signaling pathway","termid":"GO:0034147"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"positive regulation of TLR5 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034149"}


id: MONDO:0019919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 22 disorder","termid":"MONDO:0700026"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 22","secondary_identifiers":["icd11.foundation:752412918","Orphanet:96188","GARD:19338","MEDGEN:1683631","UMLS:C5190524"],"synonyms":[{"name":"UPD(22)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 22","type":"exact"}],"termid":"MONDO:0019919","xrefs":{"Monarch":{"xref_id":"0019919"}}}


id: PBO:0047925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p15.1)","termid":"PBO:0047925"}


id: MONDO:0005938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the kidney due to mycobacteria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tuberculosis","secondary_identifiers":["DOID:9733","MESH:D014398","SCTID:44323002","NCIT:C123020","UMLS:C0041328","ICD9:016.00","ICD9:016.0","EFO:0007463","MEDGEN:21728"],"synonyms":[{"name":"kidney tuberculosis","type":"exact"},{"name":"tuberculosis of kidney","type":"exact"}],"termid":"MONDO:0005938","xrefs":{"Monarch":{"xref_id":"0005938"}}}


id: FYECO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature, transferred to standard, and then to high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-step temperature shift, low to standard, standard to high","termid":"FYECO:0000295"}


id: FYPO:0001284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"phosphatidylserine absent from cell","synonyms":[{"name":"PS absent from cell","type":"exact"},{"name":"phosphatidyl-L-serine absent from cell","type":"exact"},{"name":"phosphatidylserine absent from cell during mitotic cell cycle","type":"related"},{"name":"phosphatidylserine absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001284"}


id: PR:Q9UTP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.05","synonyms":[{"name":"Spom972h-rpl3002","type":"exact"}],"termid":"PR:Q9UTP0"}


id: MONDO:0957278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 20","secondary_identifiers":["MEDGEN:1841175","UMLS:C5830539","OMIM:620383"],"termid":"MONDO:0957278","xrefs":{"Monarch":{"xref_id":"0957278"}}}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: MONDO:0017496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of thigh and lower leg with foot present","termid":"MONDO:0017442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of thigh and lower leg with foot present, unilateral","secondary_identifiers":["Orphanet:295089"],"synonyms":[{"name":"Femorotibiofibular intercalary transverse meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017496","xrefs":{"Monarch":{"xref_id":"0017496"}}}


id: GO:0062082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-E specific inhibitory MHC class Ib receptor activity","termid":"GO:0062082"}


id: PBO:0077585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 4","termid":"PBO:0077585"}


id: GO:2000314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040037"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"negative regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000314"}


id: PBO:0065656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type G","termid":"PBO:0065656"}


id: PBO:0114491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane flippase required for the translocation of Man5GlcNac2-PP-Dol; catalyzes the translocation of the lipid-linked oligosaccharide Man5GlcNac2-PP-Dol across the ER lipid bilayer from the cytoplasmic face to the lumen; mutation is suppressed by expression of human p53 protein; human ortholog RFT1 complements the yeast null mutant","termid":"PBO:0114491"}


id: PBO:0065786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiescin sulfhydryl oxidase 2","termid":"PBO:0065786"}


id: GO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the embryo that results in birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"parturition","termid":"GO:0007567"},{"relation_name":"part_of","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fetal process involved in parturition","termid":"GO:0060138"}


id: PBO:0029505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_tapered_cells_(obsolete_FYPO:0002210)","termid":"PBO:0029505"}


id: SO:0001030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Forward is an attribute of the feature, where the feature is in the 5' to 3' direction.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction_attribute","termid":"SO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward","termid":"SO:0001030"}


id: GO:1905749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GOC:TermGenie","PMID:22869721","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"regulation of endocytic recycling","termid":"GO:2001135"},{"relation_name":"regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"}


id: PBO:0052179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 10","termid":"PBO:0052179"}


id: MONDO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome refers to a group of symptoms that occur when some of the nerves in the cauda equina (the bundle of nerves that spread out from the bottom of the spinal cord) become compressed and/or damaged. Signs and symptoms of this condition include pain, numbness, or tingling in the lower back and/or legs; ' foot drop '; problems with bowel and/or bladder control; and sexual dysfunction. Cauda equina syndrome may be caused by a herniated disk, tumor, infection, fracture, or spinal stenosis. Treatment usually targets the underlying cause of the condition and often includes surgery to remove the material that is pressing on the nerves. Physical therapy, occupational therapy, and/or other services may be required if symptoms persist following surgery.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome","secondary_identifiers":["icd11.foundation:1490265028","MEDGEN:98229","NCIT:C35436","DOID:11577","EFO:0007196","ICD9:344.6","ICD10CM:G83.4","MESH:D000077684","MESH:D011128","SCTID:192970008","UMLS:C0392548"],"synonyms":[{"name":"cauda equina syndromic disease","type":"exact"},{"name":"syndromic disease of cauda equina","type":"exact"}],"termid":"MONDO:0005693","xrefs":{"Monarch":{"xref_id":"0005693"}}}


id: PBO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.3.2","termid":"PBO:0004263"}


id: GO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis.","definition_xrefs":["GOC:curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"phagocytosis, engulfment","synonyms":[{"name":"phagosome biosynthesis","type":"related"},{"name":"phagosome formation","type":"related"}],"termid":"GO:0006911"}


id: PBO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA9 antisense RNA 1","termid":"PBO:0051902"}


id: PBO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-6, pseudogene","termid":"PBO:0052914"}


id: PBO:0083269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083269"}


id: MONDO:0018683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noninherited ichthyosis associated with malignancy; autoimmune, inflammatory, nutritional, metabolic, infectious, and neurologic diseases; or medications.","definition_xrefs":["PMID:20643494"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ichthyosis vulgaris","termid":"MONDO:0024304"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired ichthyosis","secondary_identifiers":["SCTID:8691004","icd11.foundation:1504032289","MESH:C538175","Orphanet:454","NCIT:C112831","UMLS:C0263386","MEDGEN:78092","ICD10CM:L85.0","GARD:476"],"synonyms":[{"name":"acquired ichthyosis","type":"exact"},{"name":"acquired ichthyosis (disease)","type":"exact"},{"name":"fish scale disease, acquired","type":"related"},{"name":"ichthyosis acquisita","type":"exact"},{"name":"ichthyosis, acquired","type":"related"}],"termid":"MONDO:0018683","xrefs":{"Monarch":{"xref_id":"0018683"}}}


id: PBO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_organization","termid":"PBO:0031031"}


id: MONDO:0007722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromia iridis","secondary_identifiers":["OMIM:142500","UMLS:C0423318","MESH:C538115","HP:0001100","MEDGEN:98395"],"synonyms":[{"name":"heterochromia iridis","type":"exact"},{"name":"heterochromia iridis (disease)","type":"exact"}],"termid":"MONDO:0007722","xrefs":{"Monarch":{"xref_id":"0007722"}}}


id: PBO:0074043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A25 antisense RNA 1","termid":"PBO:0074043"}


id: PBO:0062372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 11 pseudogene","termid":"PBO:0062372"}


id: GO:1905670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a TORC2 complex into its constituent components.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:21952218","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"TORC2 complex disassembly","synonyms":[{"name":"TOR complex 2 disassembly","type":"exact"},{"name":"TORC 2 complex disassembly","type":"exact"},{"name":"TORC2 disassembly","type":"exact"},{"name":"mTORC2 disassembly","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex disassembly","type":"exact"}],"termid":"GO:1905670"}


id: PATO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's all-encompassing, grotesque morphological defects.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monstrous","termid":"PATO:0001465"}


id: FYPO:0006840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which LinE complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal LinE complex assembly","synonyms":[{"name":"normal linear element protein complex assembly","type":"exact"}],"termid":"FYPO:0006840"}


id: MONDO:1010868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in goats due to a mutation in the GNS gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, GNS-related, goat","secondary_identifiers":["OMIA:000665-9925"],"synonyms":[{"name":"mucopolysaccharidosis IIID, goat","type":"related"}],"termid":"MONDO:1010868","xrefs":{"Monarch":{"xref_id":"1010868"}}}


id: PBO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2","termid":"PBO:0048392"}


id: PBO:0041378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5","termid":"PBO:0041378"}


id: PBO:0068257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 4","termid":"PBO:0068257"}


id: MONDO:0009052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive cutis laxa type I that has material basis in homozygous or compound heterozygous mutation in the FBLN5 gene on chromosome 14q32.","definition_xrefs":["DOID:0070135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1A","secondary_identifiers":["OMIM:219100","MEDGEN:1846304","SCTID:59451000","MESH:C562628","GARD:15157","UMLS:C5848058"],"synonyms":[{"name":"ARCL1","type":"broad"},{"name":"ARCL1A","type":"exact"},{"name":"autosomal recessive cutis laxa type IA","type":"related"},{"name":"cutis laxa, autosomal recessive","type":"related"},{"name":"cutis laxa, autosomal recessive, type IA","type":"related"}],"termid":"MONDO:0009052","xrefs":{"Monarch":{"xref_id":"0009052"}}}


id: PBO:0071470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 11","termid":"PBO:0071470"}


id: GO:0047431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-6-methylpyridine-3,4-dicarboxylate + H+ = 5-hydroxy-6-methylpyridine-3-carboxylate + CO2.","definition_xrefs":["EC:4.1.1.51","RHEA:13669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03461","MetaCyc:4.1.1.51-RXN"],"synonyms":[{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase (3-hydroxy-2-methylpyridine-5-carboxylate-forming)","type":"related"},{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase activity","type":"related"}],"termid":"GO:0047431"}


id: SO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. Transfer RNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNA's corresponding amino acid is attached (by aminoacyl-tRNA synthetases). Transfer RNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tRNA_primary_transcript","termid":"SO:0000210"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/TRNA"],"synonyms":[{"name":"INSDC_feature:tRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"transfer RNA","type":"related"},{"name":"transfer ribonucleic acid","type":"related"}],"termid":"SO:0000253"}


id: GO:0005853
data:
  {"annotated_genes":["SJAG_04157","SJAG_02180","SJAG_02493","SJAG_01851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57240,118772,118773,118774],"is_not":false,"summary":null,"term":"GO:0005853"}]},"cv_name":"cellular_component","definition":"A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma.","definition_xrefs":["PMID:10216950","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01851":null,"SJAG_02180":null,"SJAG_02493":null,"SJAG_04157":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0005853","terms_by_termid":{"GO:0005853":null}}


id: PBO:0038648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 3, pristanoyl","termid":"PBO:0038648"}


id: GO:0019082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a viral protein.","definition_xrefs":["GOC:bf","GOC:jl","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral protein processing","secondary_identifiers":["Reactome:R-HSA-174495","Reactome:R-HSA-9694719","Reactome:R-HSA-9683612","Reactome:R-HSA-9694594","Reactome:R-HSA-171286","Reactome:R-HSA-9694631","Reactome:R-HSA-9683686","Reactome:R-HSA-9694548","Reactome:R-HSA-9683610","Reactome:R-HSA-9683673"],"termid":"GO:0019082"}


id: GO:0098639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any collagen binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen binding","termid":"GO:0005518"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"}],"interesting_parent_ids":["GO:0003674","GO:0098631","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"collagen binding involved in cell-matrix adhesion","termid":"GO:0098639"}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["GOC:PARL","PMID:18644871","GOC:TermGenie","GO_REF:0000079","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0006914","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: GO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle.","definition_xrefs":["NIF_Subcellular:sao1299635018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell contact zone","synonyms":[{"name":"cell cell contact zone","type":"exact"}],"termid":"GO:0044291"}


id: GO:0005250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by an outwardly-rectifying voltage-gated channel that produces a transient outward current upon a step change in membrane potential.","definition_xrefs":["PMID:5575340","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outward rectifier potassium channel activity","termid":"GO:0015271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"A-type (transient outward) potassium channel activity","secondary_identifiers":["Reactome:R-HSA-5577234"],"termid":"GO:0005250"}


id: GO:0047227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1L-1-O-(indol-3-yl)acetyl-myo-inositol + UDP-D-galactose = 5-O-(indol-3-ylacetyl)-myo-inositol D-galactoside + H+ + UDP.","definition_xrefs":["RHEA:21148","EC:2.4.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"indolylacetyl-myo-inositol galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.156-RXN","KEGG_REACTION:R04334"],"synonyms":[{"name":"UDP-galactose:(indol-3-yl)acetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:indol-3-ylacetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"indol-3-ylacetyl-myo-inositol galactoside synthase activity","type":"related"},{"name":"uridine diphosphogalactose-indolylacetylinositol galactosyltransferase activity","type":"related"}],"termid":"GO:0047227"}


id: PBO:0091667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm3","termid":"PBO:0091667"}


id: PBO:0040361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit k","termid":"PBO:0040361"}


id: GO:0097018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which albumin is taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron.","definition_xrefs":["PMID:18431508","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal protein absorption","termid":"GO:0097017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal albumin absorption","termid":"GO:0097018"}


id: PBO:0091350
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CLNS1A","termid":"PBO:0091350"}


id: MONDO:0019344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Antisynthetase (AS) syndrome is a clinically heterogeneous form of idiopathic inflammatory myopathy characterized by myositis, arthralgia, Raynaud phenomenon, mechanic hands, interstitial lung disease (ILD), and serum autoantibodies to aminoacyl transfer RNA synthetases (anti-ARS).","definition_xrefs":["Orphanet:81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"antisynthetase syndrome","secondary_identifiers":["MedDRA:10068801","GARD:735","DOID:0080744","EFO:1001982","MEDGEN:388567","MESH:C537778","SCTID:445187004","UMLS:C2609059","icd11.foundation:1572057936","ICD9:279.49","NORD:1926"],"synonyms":[{"name":"AS syndrome","type":"exact"},{"name":"anti-Jo1 syndrome","type":"exact"}],"termid":"MONDO:0019344","xrefs":{"Monarch":{"xref_id":"0019344"}}}


id: MONDO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in a pre-existing pleomorphic adenoma in the lacrimal gland.","definition_xrefs":["NCIT:C6804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"carcinoma ex pleomorphic adenoma","termid":"MONDO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["UMLS:C0346342","DOID:296","MEDGEN:138058","SCTID:254989000","MONDO:0021278"],"synonyms":[{"name":"carcinoma Ex pleomorphic adenoma of the lacrimal gland","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of lacrimal gland","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"lacrimal gland malignant mixed neoplasm","type":"exact"},{"name":"lacrimal gland malignant mixed tumor","type":"exact"},{"name":"lacrimal gland malignant mixed tumour","type":"exact"},{"name":"malignant mixed neoplasm of lacrimal gland","type":"exact"},{"name":"malignant mixed neoplasm of the lacrimal gland","type":"exact"},{"name":"malignant mixed tumor of lacrimal gland","type":"exact"},{"name":"malignant mixed tumor of the lacrimal gland","type":"exact"},{"name":"malignant mixed tumour of lacrimal gland","type":"exact"},{"name":"malignant mixed tumour of the lacrimal gland","type":"exact"},{"name":"mixed lacrimal gland cancer","type":"related"}],"termid":"MONDO:0002469","xrefs":{"Monarch":{"xref_id":"0002469"}}}


id: MONDO:0009692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myelofibrosis with myeloid metaplasia is a myeloproliferative disease with annual incidence of approximately 1 case per 100,000 individuals and age at diagnosis around 60 (an increased prevalence is noted in Ashkenazi Jews). Clinical manifestations depend on the type of blood cell affected and may include anemia, pallor, splenomegaly, hypermetabolic state, petechiae, ecchymosis, bleeding, lymphadenopathy, hepatomegaly, portal hypertension.","definition_xrefs":["Orphanet:824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired aplastic anemia","termid":"MONDO:0015610"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"primary myelofibrosis","secondary_identifiers":["ICD9:289.83","icd11.foundation:1407285327","DOID:4971","GARD:8618","icd11.foundation:336704235","OMIM:254450","UMLS:C0001815","EFO:0002430","NCIT:C2862","MEDGEN:7929","ICD9:238.76","MESH:D055728","NORD:1611","ONCOTREE:PMF","ICDO:9961/3"],"synonyms":[{"name":"AMM","type":"exact"},{"name":"Agnogenic myeloid metaplasia","type":"exact"},{"name":"CIMF","type":"exact"},{"name":"aleukemic myelosis","type":"exact"},{"name":"bone marrow fibrosis","type":"exact"},{"name":"chronic idiopathic myelofibrosis","type":"exact"},{"name":"idiopathic bone marrow fibrosis","type":"exact"},{"name":"idiopathic myelofibrosis","type":"exact"},{"name":"megakaryocytic myelosclerosis","type":"exact"},{"name":"myelofibrosis","type":"related"},{"name":"myelofibrosis with myeloid metaplasia","type":"narrow"},{"name":"myelofibrosis with myeloid metaplasia, somatic","type":"exact"},{"name":"myelofibrosis, somatic","type":"exact"},{"name":"myeloid metaplasia","type":"related"},{"name":"myelosclerosis","type":"exact"},{"name":"myelosclerosis with myeloid metaplasia","type":"exact"},{"name":"osteomyelofibrosis","type":"exact"},{"name":"primary myelofibrosis","type":"exact"}],"termid":"MONDO:0009692","xrefs":{"Monarch":{"xref_id":"0009692"}}}


id: PBO:0071733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 31","termid":"PBO:0071733"}


id: PBO:0070745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 1","termid":"PBO:0070745"}


id: PBO:0038412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of,_positive_effect","termid":"PBO:0038412"}


id: PBO:0088801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP","termid":"PBO:0088801"}


id: MONDO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually indolent mature B-cell lymphoma, arising from the marginal zone of lymphoid tissues. It is characterized by the presence of small to medium sized atypical lymphocytes. It comprises three entities, according to the anatomic sites involved: extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue, which affects extranodal sites (most often stomach, lung, skin, and ocular adnexa); nodal marginal zone B-cell lymphoma, which affects lymph nodes without evidence of extranodal disease; and splenic marginal zone B-cell lymphoma, which affects the spleen and splenic hilar lymph nodes, bone marrow, and often the peripheral blood.","definition_xrefs":["NCIT:C4341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"marginal zone lymphoma","secondary_identifiers":["GARD:13237","EFO:1000630","ICDO:9699/3","Orphanet:300912","SCTID:447100004","MEDGEN:277950","ONCOTREE:MZL","DOID:0050748","UMLS:C1367654"],"synonyms":[{"name":"MZBCL","type":"exact"},{"name":"MZL","type":"exact"},{"name":"lymphoma of marginal zone B cell","type":"exact"},{"name":"marginal zone B cell lymphoma","type":"exact"},{"name":"marginal zone B-cell lymphoma","type":"exact"},{"name":"marginal zone lymphoma","type":"exact"}],"termid":"MONDO:0017604","xrefs":{"Monarch":{"xref_id":"0017604"}}}


id: GO:0140532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmosensory signaling MAPK cascade.","definition_xrefs":["PMID:31911490"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmosensory signaling MAPK cascade (obsolete GO:0140532)","termid":"GO:0140532"}


id: PATO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000147 absolute temperature (obsolete PATO:0000147)","termid":"PATO:0000147"}


id: FYECO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A nitrogen source shift condition in which cells are first grown in a medium with glutamate as the nitrogen source, and then shifted to a medium with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen source shift","termid":"FYECO:0000221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift, glutamate to proline","termid":"FYECO:0000220"}


id: FYPO:0009108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the spindle pole bodies (SPBs) of daughter nuclei are misoriented during mitotic telophase. Normally, SPBs face the cell tips at the end of anaphase when the spindle disassembles, but as microtubules are nucleated from SPBs and telophase nuclear positioning proceeds, the SPBs tend to face the cell equator.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body orientation during mitotic telophase","synonyms":[{"name":"abnormal spindle pole body angle during mitotic telophase","type":"exact"},{"name":"abnormal spindle pole body positioning within the nucleus during mitotic telophase","type":"exact"},{"name":"spindle pole body facing cell tips during mitotic telophase","type":"related"}],"termid":"FYPO:0009108"}


id: FYPO:0006048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a mitotic spindle assembles, but does not remain at a constant length or gradually elongate.","definition_xrefs":["PomBase:mah","PMID:23885124","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"unstable mitotic spindle","synonyms":[{"name":"unstable mitotic spindle during vegetative growth","type":"exact"},{"name":"unstable mitotic spindle length","type":"exact"},{"name":"unstable spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006048"}


id: PR:P31411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P31411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.05c","synonyms":[{"name":"Spom972h-vma2","type":"exact"},{"name":"V-ATPase 57 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31411"}


id: MONDO:0100048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing graft vs. host disease.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"graft-versus-host disease, susceptibility to","secondary_identifiers":["OMIM:614395","UMLS:C3280677","MEDGEN:482307"],"synonyms":[{"name":"GVHDS","type":"exact"}],"termid":"MONDO:0100048","xrefs":{"Monarch":{"xref_id":"0100048"}}}


id: GO:0140804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + NAD+ = H+ + N(6)-(ADP-D-ribosyl)-L-lysyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:58220","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"NAD+-protein-lysine ADP-ribosyltransferase activity","termid":"GO:0140804"}


id: GO:2000584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010642"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:2000583"},{"relation_name":"negatively_regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"negative regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"negative regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"negative regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000584"}


id: PBO:0111932
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0111932"}


id: GO:0043001
data:
  {"annotated_genes":["SJAG_03970","SJAG_00916","SJAG_01516","SJAG_00144","SJAG_04609","SJAG_03838","SJAG_00330","SJAG_01114","SJAG_00858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70542,77967,95482,106733,107363,109111,109891,113313],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[88431],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to plasma membrane transport","termid":"GO:0006893"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_03838":null,"SJAG_03970":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043001","terms_by_termid":{"GO:0042997":null,"GO:0043001":null}}


id: PBO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 4","termid":"PBO:0061252"}


id: GO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of methylammonium through a transmembrane aqueous pore or channel. Methylammonium is CH3NH2.","definition_xrefs":["GOC:pr","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylammonium transmembrane transporter activity","termid":"GO:0015200"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"methylammonium channel activity","termid":"GO:0015264"}


id: MONDO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal chondrodysplasia, Moerman type (obsolete MONDO:0015424)","secondary_identifiers":["Orphanet:1420","GARD:3225"],"synonyms":[{"name":"Moerman-Vandenberghe-Fryns syndrome","type":"exact"},{"name":"lethal chondrodysplasia Moerman type","type":"related"}],"termid":"MONDO:0015424","xrefs":{"Monarch":{"xref_id":"0015424"}}}


id: FYPO:0005207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type) when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:689088","PomBase:mah","PMID:21965528","PMID:872891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"normal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"normal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"normal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005207"}


id: MONDO:0017813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebrofacioarticular syndrome is a rare multiple congenital anomalies syndrome characterized by mild to severe intellectual disability, a distinctive facial gestalt (blepharophimosis, maxillary hypoplasia, telecanthus, microtia and atresia of the external auditory meatus) as well as skeletal and articular abnormalities (e.g. camptodactyly of the fingers, cutaneous syndactyly, talipes equinovarus, flexion contractures of the proximal interphalangeal joints, hip or elbow subluxation, joint laxity). Affected individuals also present neonatal hypotonia, variable respiratory manifestations, chronic feeding difficulties and gray matter heterotopia.","definition_xrefs":["Orphanet:314679"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome","secondary_identifiers":["DOID:0060238","GARD:5456","OMIMPS:601390","MEDGEN:318616","UMLS:C1832390"],"synonyms":[{"name":"Van Maldergem Wetzburger Verloes syndrome","type":"related"},{"name":"Van Maldergem syndrome","type":"exact"},{"name":"cerebro-facio-articular syndrome","type":"exact"},{"name":"cerebro-facio-articular syndrome of Van Maldergem","type":"related"}],"termid":"MONDO:0017813","xrefs":{"Monarch":{"xref_id":"0017813"}}}


id: PBO:0043224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 3, pseudogene","termid":"PBO:0043224"}


id: MONDO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laryngeal abductor paralysis (obsolete MONDO:0000177)","termid":"MONDO:0000177","xrefs":{"Monarch":{"xref_id":"0000177"}}}


id: GO:0009854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reactions of the C2 pathway bring about the metabolic conversion of two molecules of 2-phosphoglycolate to one molecule of 3-phosphoglycerate, which can be used by the C3 cycle, and one molecule of carbon dioxide (CO2).","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"part_of","term_name":"photorespiration","termid":"GO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative photosynthetic carbon pathway","termid":"GO:0009854"}


id: FYPO:0004885
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[119430,119449,119445,119448,119443,119450,119429,119446,119426,119420,119447,119427,119419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[119423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear envelope is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":8,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_03892"],"name":"abnormal protein localization to nuclear envelope during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050","SJAG_03892","SJAG_03783","SJAG_04489","SJAG_05207"],"single_locus_genotype_uniquenames":["vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps24delta","cmp7delta","nur1delta","did4delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta"],"synonyms":[{"name":"abnormal protein localisation to nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormal protein localization to nuclear envelope during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004885","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007073":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0015199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aniridia-intellectual disability syndrome is an extremely rare autosomal dominant developmental defect of the eye described in several members of one family that is characterized by the association of moderate intellectual disability with aniridia, lens dislocation, optic nerve hypoplasia and cataracts. There have been no further descriptions in the literature since 1974.","definition_xrefs":["Orphanet:1068"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia - intellectual disability syndrome","secondary_identifiers":["UMLS:C2931243","MEDGEN:419752","GARD:5530","MESH:C536568"],"synonyms":[{"name":"Walker Dyson syndrome","type":"related"},{"name":"Walker-Dyson syndrome","type":"exact"},{"name":"aniridia associated with intellectual disability and other eye abnormalities","type":"related"},{"name":"aniridia associated with mental retardation and other eye abnormalities","type":"related"}],"termid":"MONDO:0015199","xrefs":{"Monarch":{"xref_id":"0015199"}}}


id: PBO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 2","termid":"PBO:0060986"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: PBO:0003571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADhesioN defective","termid":"PBO:0003571"}


id: PBO:0089630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X ortholog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0089630"}


id: GO:0102327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxoacyl-CoA = H+ + coenzyme A + a 3-oxoacid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxoacyl-CoA hydrolase activity (obsolete GO:0102327)","termid":"GO:0102327"}


id: MONDO:0021408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the frontal sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of frontal sinus","secondary_identifiers":["SCTID:195759002","icd11.foundation:1462900314","ICD9:471.8","NCIT:C4367","UMLS:C0339814","MEDGEN:137927"],"synonyms":[{"name":"frontal sinus polyp","type":"exact"},{"name":"polyp of the frontal sinus","type":"exact"}],"termid":"MONDO:0021408","xrefs":{"Monarch":{"xref_id":"0021408"}}}


id: GO:1901960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isobutanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:22224870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isobutanol metabolic process","synonyms":[{"name":"isobutanol metabolism","type":"exact"}],"termid":"GO:1901960"}


id: FYPO:0005476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased filamentous actin level","synonyms":[{"name":"decreased accumulation of filamentous actin in cell","type":"related"},{"name":"decreased cellular F-actin level","type":"exact"},{"name":"decreased cellular filamentous actin level","type":"exact"},{"name":"decreased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"decreased filamentous actin level during vegetative growth","type":"exact"},{"name":"reduced filamentous actin level","type":"exact"}],"termid":"FYPO:0005476"}


id: GO:1900597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving demethylkotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"demethylkotanin metabolic process","synonyms":[{"name":"demethylkotanin metabolism","type":"exact"}],"termid":"GO:1900597"}


id: PBO:0052504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 17","termid":"PBO:0052504"}


id: MONDO:0009633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microspherophakia and/or megalocornea, with ectopia lentis and with or without secondary glaucoma","secondary_identifiers":["MEDGEN:761238","OMIM:251750","UMLS:C3538951"],"synonyms":[{"name":"MSPKA","type":"related"},{"name":"microspherophakia and/or megalocornea, with ectopia lentis and with or without secondary glaucoma","type":"exact"}],"termid":"MONDO:0009633","xrefs":{"Monarch":{"xref_id":"0009633"}}}


id: MONDO:0009450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia with excessively long cilia","secondary_identifiers":["ICD9:759.89","UMLS:C0340036","MEDGEN:90947","SCTID:233665006","OMIM:242680","MESH:C536287","GARD:2982"],"synonyms":[{"name":"ciliary dyskinesia with excessively long cilia","type":"exact"},{"name":"immotile cilia syndrome due to excessively long cilia","type":"related"}],"termid":"MONDO:0009450","xrefs":{"Monarch":{"xref_id":"0009450"}}}


id: MONDO:0010150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from any of the following anatomic sites: lip and oral cavity, nasal cavity, paranasal sinuses, pharynx, larynx, and salivary glands.","definition_xrefs":["NCIT:C34447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck squamous cell carcinoma","secondary_identifiers":["MedDRA:10060121","MEDGEN:257911","OMIM:275355","EFO:0000181","ONCOTREE:HNSC","Orphanet:67037","SCTID:716659002","DOID:5520","GARD:8503","MESH:C535575","UMLS:C1168401"],"synonyms":[{"name":"HNSCC","type":"exact"},{"name":"SCCHN","type":"exact"},{"name":"carcinoma of the head and neck","type":"narrow"},{"name":"craniocervical region squamous cell carcinoma","type":"exact"},{"name":"head and neck squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of head and neck","type":"exact"},{"name":"squamous cell carcinoma of the head and neck","type":"exact"},{"name":"squamous cell carcinoma, head and neck","type":"related"},{"name":"squamous cell carcinoma, head and neck, somatic","type":"exact"},{"name":"squamous cell carcinomas of head and neck","type":"exact"}],"termid":"MONDO:0010150","xrefs":{"Monarch":{"xref_id":"0010150"}}}


id: GO:0102382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rebaudioside B + UDP-alpha-D-glucose = rebaudioside A + UDP.","definition_xrefs":["RHEA:61760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"rebaudioside B glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13518"],"termid":"GO:0102382"}


id: PBO:0029078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-third_meiotic_division","termid":"PBO:0029078"}


id: MOD:00602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated residue","synonyms":[{"name":"NMeRes","type":"exact"}],"termid":"MOD:00602"}


id: PBO:0080311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 75 pseudogene","termid":"PBO:0080311"}


id: MONDO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete herpes simplex virus keratitis (obsolete MONDO:0000876)","termid":"MONDO:0000876","xrefs":{"Monarch":{"xref_id":"0000876"}}}


id: PBO:0029601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transporter_activity","termid":"PBO:0029601"}


id: PBO:0091190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe","termid":"PBO:0091190"}


id: PBO:0111525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 5","termid":"PBO:0111525"}


id: FYPO:0006452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed processivity of a histone H3 acetyltransferase activity is lower than normal. Processivity refers to the number of methylation reactions catalyzed (methyl residues added) per histone binding event.","definition_xrefs":["PomBase:mah","PMID:26401015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3 acetyltransferase processivity","synonyms":[{"name":"decreased H3 histone acetyltransferase processivity","type":"exact"},{"name":"reduced histone H3 acetyltransferase processivity","type":"exact"}],"termid":"FYPO:0006452"}


id: PBO:0083744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the outer kinetochore MIND complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for kinetochore bi-orientation and accurate chromosome segregation; complex consists of Mtw1p, Nnf1p, Nsl1p and Dsn1p; homologous to metazoan CENP-H proteins","termid":"PBO:0083744"}


id: PBO:0075422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 8","termid":"PBO:0075422"}


id: MONDO:0005502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dengue fever (DF), caused by dengue virus, is an arboviral disease characterized by an initial non-specific febrile illness that can sometimes progress to more severe forms manifesting capillary leakage and hemorrhage (dengue hemorrhagic fever, or DHF) and shock (dengue shock syndrome, or DSS).","definition_xrefs":["Orphanet:99828"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"arbovirus fever","termid":"MONDO:0018093"},{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dengue disease","secondary_identifiers":["DOID:12205","MESH:D003715","NCIT:C34528","MedDRA:10012310","SCTID:38362002","UMLS:C0011311","EFO:0005547","GARD:6254","MEDGEN:3721","ICD9:061"],"synonyms":[{"name":"DF","type":"exact"},{"name":"Dengue","type":"exact"},{"name":"Dengue fever","type":"exact"},{"name":"Dengue virus caused disease or disorder","type":"exact"},{"name":"Dengue virus disease or disorder","type":"exact"},{"name":"Dengue virus infection","type":"exact"},{"name":"Dengue virus infectious disease","type":"exact"},{"name":"Philippine hemorrhagic fever","type":"related"},{"name":"Singapore hemorrhagic fever","type":"related"},{"name":"Thai hemorrhagic fever","type":"related"},{"name":"break bone fever","type":"exact"},{"name":"breakbone fever","type":"exact"},{"name":"classic dengue","type":"exact"},{"name":"classical dengue","type":"related"},{"name":"hemorrhagic dengue","type":"related"}],"termid":"MONDO:0005502","xrefs":{"Monarch":{"xref_id":"0005502"}}}


id: GO:1904357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere maintenance via telomere lengthening.","definition_xrefs":["GO_REF:0000058","PMID:23959892","GOC:TermGenie","GOC:BHF_telomere","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomere lengthening","termid":"GO:1904356"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via telomere lengthening","termid":"GO:0010833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via telomere lengthening","synonyms":[{"name":"down regulation of telomere maintenance via telomere lengthening","type":"exact"},{"name":"down-regulation of telomere maintenance via telomere lengthening","type":"exact"},{"name":"downregulation of telomere maintenance via telomere lengthening","type":"exact"},{"name":"inhibition of telomere maintenance via telomere lengthening","type":"narrow"}],"termid":"GO:1904357"}


id: PBO:0026975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_in_mitochondrion","termid":"PBO:0026975"}


id: MONDO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myeloid leukemia occurring in childhood.","definition_xrefs":["NCIT:C9160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"childhood leukemia","termid":"MONDO:0004355"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"childhood acute myeloid leukemia","secondary_identifiers":["MEDGEN:65075","DOID:0070323","ICDO:M9861/3","UMLS:C0220621","EFO:0000330","GARD:8199"],"synonyms":[{"name":"acute myeloid leukaemia (AML)","type":"broad"},{"name":"acute myeloid leukaemia of childhood","type":"exact"},{"name":"acute myeloid leukemia (AML)","type":"broad"},{"name":"acute myeloid leukemia of childhood","type":"exact"},{"name":"childhood AML","type":"exact"},{"name":"childhood acute granulocytic leukaemia","type":"exact"},{"name":"childhood acute granulocytic leukemia","type":"exact"},{"name":"childhood acute myeloblastic leukaemia","type":"exact"},{"name":"childhood acute myeloblastic leukemia","type":"exact"},{"name":"childhood acute myelocytic leukaemia","type":"exact"},{"name":"childhood acute myelocytic leukemia","type":"exact"},{"name":"childhood acute myelogenous leukaemia","type":"exact"},{"name":"childhood acute myelogenous leukemia","type":"exact"},{"name":"childhood acute myeloid leukemia","type":"exact"},{"name":"paediatric AML","type":"exact"},{"name":"paediatric acute myeloblastic leukaemia","type":"exact"},{"name":"paediatric acute myelocytic leukaemia","type":"exact"},{"name":"paediatric acute myelogenous leukaemia","type":"exact"},{"name":"paediatric acute myeloid leukaemia","type":"exact"},{"name":"pediatric AML","type":"exact"},{"name":"pediatric acute myeloblastic leukemia","type":"exact"},{"name":"pediatric acute myelocytic leukemia","type":"exact"},{"name":"pediatric acute myelogenous leukemia","type":"exact"},{"name":"pediatric acute myeloid leukemia","type":"exact"}],"termid":"MONDO:0004996","xrefs":{"Monarch":{"xref_id":"0004996"}}}


id: PBO:0113523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; upregulated under glucose starvation; targeted to vacuole via CVT pathway and AP-3 pathway","termid":"PBO:0113523"}


id: MONDO:0013542
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86309],"is_not":false,"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"Any Moyamoya disease in which the cause of the disease is a mutation in the ACTA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"Moyamoya disease 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15746","OMIM:614042","MEDGEN:481320","UMLS:C3279690"],"synonyms":[{"name":"ACTA2 Moyamoya disease","type":"exact"},{"name":"MYMY5","type":"related"},{"name":"Moyamoya disease 5","type":"exact"},{"name":"Moyamoya disease caused by mutation in ACTA2","type":"exact"},{"name":"Moyamoya disease type 5","type":"exact"}],"termid":"MONDO:0013542","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0013542"}}}


id: PBO:0054015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1345","termid":"PBO:0054015"}


id: PBO:0040147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asialoglycoprotein receptor 2","termid":"PBO:0040147"}


id: PBO:0087517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved ssDNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; promotes recruitment, helicase and nuclease activities of Dna2p; role in DNA catenation/decatenation pathway of chromosome disentangling; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087517"}


id: GO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycerophospho group from one membrane-derived oligosaccharide to another.","definition_xrefs":["EC:2.7.8.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSII-RXN"],"synonyms":[{"name":"membrane-derived-oligosaccharide-6-(glycerophospho)-D-glucose:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"periplasmic phosphoglycerotransferase activity","type":"narrow"},{"name":"phosphoglycerol cyclase activity","type":"related"}],"termid":"GO:0047495"}


id: MONDO:0011302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 10q25.","definition_xrefs":["DOID:0110754","MONDO:patterns/inherited_susceptibility","PMID:9788970"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 17","secondary_identifiers":["UMLS:C1864068","MEDGEN:351036","OMIM:603266","MESH:C566395"],"synonyms":[{"name":"IDDM17","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 17","type":"related"},{"name":"insulin-dependent diabetes mellitus 17","type":"exact"}],"termid":"MONDO:0011302","xrefs":{"Monarch":{"xref_id":"0011302"}}}


id: GO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-23 of any form of vitamin D.","definition_xrefs":["PMID:22100522","PMID:30205156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}


id: GO:0097507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated adenine (hypoxanthine).","definition_xrefs":["PMID:18789404","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"hypoxanthine DNA N-glycosylase activity","synonyms":[{"name":"hypoxanthine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097507"}


id: GO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminomuconate + H2O + H+ = (Z)-5-oxohex-2-enedioate + NH4.","definition_xrefs":["EC:3.5.99.5","RHEA:20996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-aminomuconate deaminase activity","secondary_identifiers":["KEGG_REACTION:R03887","MetaCyc:3.5.99.5-RXN"],"synonyms":[{"name":"2-aminomuconate aminohydrolase activity","type":"related"}],"termid":"GO:0050540"}


id: GO:1905155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane invagination.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of membrane invagination","termid":"GO:1905153"},{"relation_name":"positively_regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of membrane invagination","synonyms":[{"name":"activation of membrane invagination","type":"narrow"},{"name":"up regulation of membrane invagination","type":"exact"},{"name":"up-regulation of membrane invagination","type":"exact"},{"name":"upregulation of membrane invagination","type":"exact"}],"termid":"GO:1905155"}


id: PBO:0066609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOXF1 antisense RNA 1","termid":"PBO:0066609"}


id: PBO:0065402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 5","termid":"PBO:0065402"}


id: PBO:0041920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR3 antisense RNA 1","termid":"PBO:0041920"}


id: MONDO:0017844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sezary syndrome (SS) is an aggressive form of cutaneous T-cell lymphoma characterized by a triad of erythroderma, lymphadenopathy and circulating atypical lymphocytes (Sezary cells).","definition_xrefs":["Orphanet:3162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"Sezary syndrome","secondary_identifiers":["GARD:7629","MedDRA:10040493","icd11.foundation:1358020385","MESH:D012751","SCTID:118611004","EFO:1000785","MedDRA:10040500","ICD9:202.2","MEDGEN:19959","NORD:1707","ONCOTREE:SS","ICDO:9701/3","UMLS:C0036920","DOID:8541","NCIT:C3366"],"synonyms":[{"name":"CTCL / Sezary syndrome","type":"exact"},{"name":"SC)zary syndrome","type":"exact"},{"name":"SS","type":"related"},{"name":"Sezary disease","type":"exact"},{"name":"Sezary lymphoma","type":"exact"},{"name":"Sezary syndrome","type":"exact"},{"name":"Sezary's disease","type":"exact"},{"name":"Sezary's lymphoma","type":"related"},{"name":"Sheehan Syndrome","type":"exact"},{"name":"Sézary lymphoma","type":"exact"},{"name":"Sézary syndrome","type":"exact"},{"name":"cutaneous T-cell lymphoma/Sezary syndrome","type":"exact"}],"termid":"MONDO:0017844","xrefs":{"Monarch":{"xref_id":"0017844"}}}


id: PBO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A7","termid":"PBO:0046423"}


id: GO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"transverse filament","termid":"GO:0000802"}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: GO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the negative regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, classical pathway in another organism (obsolete GO:0044637)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044637"}


id: GO:0015175
data:
  {"annotated_genes":["SJAG_04295","SJAG_04984","SJAG_04725","SJAG_00626","SJAG_04637","SJAG_02029","SJAG_04718"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[70290,78203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[110339,103119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[103120,110340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[101538,100676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"}]},"cv_name":"molecular_function","definition":"Enables the transfer of neutral L-amino acids from one side of a membrane to the other. Neutral amino acids have side chains with no charge at pH 7.3.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_02029":null,"SJAG_04295":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"neutral L-amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"neutral amino acid transmembrane transporter activity","type":"exact"},{"name":"neutral amino acid transporter activity","type":"broad"}],"termid":"GO:0015175","terms_by_termid":{"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015193":null,"GO:0033229":null}}


id: GO:1905860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of heparan sulfate proteoglycan binding.","definition_xrefs":["GOC:bc","PMID:7683668","GOC:aruk","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heparan sulfate proteoglycan binding (obsolete GO:1905860)","synonyms":[{"name":"activation of heparan sulfate proteoglycan binding","type":"narrow"},{"name":"activation of heparin proteoglycan binding","type":"related"},{"name":"positive regulation of heparin proteoglycan binding","type":"related"},{"name":"up regulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"up regulation of heparin proteoglycan binding","type":"related"},{"name":"up-regulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"up-regulation of heparin proteoglycan binding","type":"related"},{"name":"upregulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"upregulation of heparin proteoglycan binding","type":"related"}],"termid":"GO:1905860"}


id: GO:0050364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + L-tryptophan = diphosphate + 4-(3-methylbut-2-enyl)-L-tryptophan.","definition_xrefs":["MetaCyc:TRYPTOPHAN-DIMETHYLALLYLTRANSFERASE-RXN","EC:2.5.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"tryptophan dimethylallyltransferase activity","secondary_identifiers":["RHEA:14173"],"synonyms":[{"name":"4-(gamma,gamma-dimethylallyl)tryptophan synthase activity","type":"related"},{"name":"DMAT synthetase activity","type":"related"},{"name":"dimethylallyl-diphosphate:L-tryptophan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:L-tryptophan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:tryptophan dimethylallyl transferase activity","type":"related"},{"name":"dimethylallyltryptophan synthetase activity","type":"related"}],"termid":"GO:0050364"}


id: GO:0072318
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80087],"is_not":false,"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"The disaggregation of a clathrin coat into its constituent components; results in stripping or removing the clathrin coat from clathrin-coated vesicles (CCV) before fusing with their targets. CVVs transport cargo from plasma membrane and trans-Golgi to the endosomal system.","definition_xrefs":["PMID:11146663","PMID:11084334","PMID:8524399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"clathrin coat disassembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"clathrin-coat disassembly","type":"exact"},{"name":"clathrin-coat uncoating","type":"exact"},{"name":"clathrin-coated vesicle uncoating","type":"exact"}],"termid":"GO:0072318","terms_by_termid":{"GO:0072318":null}}


id: GO:0060288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lineage restriction boundary within a developing tissue which does not correspond to some morphological barrier.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of a compartment boundary","synonyms":[{"name":"compartment boundary formation","type":"exact"}],"termid":"GO:0060288"}


id: GO:0047350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phospho-alpha-D-glucuronate + UTP = diphosphate + UDP-alpha-D-glucuronate.","definition_xrefs":["RHEA:16325","EC:2.7.7.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glucuronate-1-phosphate uridylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01381","MetaCyc:2.7.7.44-RXN"],"synonyms":[{"name":"UDP-D-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronate pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UTP:1-phospho-alpha-D-glucuronate uridylyltransferase activity","type":"related"},{"name":"UTP:glucuronate-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucuronic pyrophosphorylase activity","type":"related"}],"termid":"GO:0047350"}


id: PBO:0027727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_micafungin","termid":"PBO:0027727"}


id: PBO:0080505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAPL divergent transcript","termid":"PBO:0080505"}


id: PBO:0040778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 4","termid":"PBO:0040778"}


id: MONDO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the esophagus caused by fungi, most often candida albicans and candida tropicalis. It usually affects patients with immunodeficiency disorders or diabetes mellitus. Symptoms include dysphagia and pain on swallowing.","definition_xrefs":["NCIT:C27107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fungal esophagitis","secondary_identifiers":["MEDGEN:90960","SCTID:235602008","UMLS:C0341109","DOID:13147","ICD9:117.9"],"synonyms":[{"name":"fungal esophagitis","type":"exact"}],"termid":"MONDO:0001649","xrefs":{"Monarch":{"xref_id":"0001649"}}}


id: PBO:0017732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transmembrane transporter Atm1","termid":"PBO:0017732"}


id: MONDO:0013639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"narcolepsy","termid":"MONDO:0021107"},{"relation_name":"is_a","term_name":"narcolepsy, susceptibility to","termid":"MONDO:0100049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy 6, susceptibility to","secondary_identifiers":["UMLS:C3280204","MEDGEN:481834","OMIM:614223"],"synonyms":[{"name":"NRCLP6","type":"exact"},{"name":"narcolepsy 6","type":"related"},{"name":"narcolepsy 6, susceptibility to","type":"exact"}],"termid":"MONDO:0013639","xrefs":{"Monarch":{"xref_id":"0013639"}}}


id: PBO:0116763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN2 antisense RNA 1","termid":"PBO:0116763"}


id: PBO:0076618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A pseudogene 3","termid":"PBO:0076618"}


id: GO:0021654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a rhombomere boundary. This process pertains to the initial formation of a boundary delimiting a rhombomere. Rhombomeres are transverse segments of the developing rhombencephalon that are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rhombomere formation","termid":"GO:0021594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere boundary formation","termid":"GO:0021654"}


id: GO:0047270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + lipopolysaccharide = UDP + alpha-D-glucosyl-lipopolysaccharide.","definition_xrefs":["EC:2.4.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"lipopolysaccharide glucosyltransferase II activity","secondary_identifiers":["MetaCyc:RXN0-5125","RHEA:30003"],"synonyms":[{"name":"LPS glucosyltransferase II activity","type":"exact"},{"name":"UDP-glucose:galactosyl-lipopolysaccharide alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:galactosyl-lipopolysaccharide alpha-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-galactosylpolysaccharide glucosyltransferase activity","type":"related"}],"termid":"GO:0047270"}


id: GO:0000755
data:
  {"annotated_genes":["SJAG_04887","SJAG_02924","SJAG_02351","SJAG_04982","SJAG_00870","SJAG_01943","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92852,98051],"is_not":false,"summary":null,"term":"GO:0000755"},{"annotations":[110505,95625,92692,96702,78235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"During conjugation with cellular fusion, the process resulting in creating a single cell from complementary mating types. The localized remodeling and dissolution of external protective structures allow the fusion of the plasma membranes and cytoplasmic mixing. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_01943":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"cytogamy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000218","GO:0030462"],"synonyms":[{"name":"zygote formation","type":"related"}],"termid":"GO:0000755","terms_by_termid":{"GO:0000755":null,"GO:0032220":null}}


id: FYPO:0003167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein farnesyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal protein farnesyltransferase activity","termid":"FYPO:0003167"}


id: GO:0043565
data:
  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id: PBO:0087273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3C histone deacetylase scaffold; can act as prion [ESI+] (Expressed Subtelomeric Information) that drives emergence and transgenerational inheritance of activated chromatin state; prion conformer is triggered by transient Snt1p phosphorylation upon cell cycle arrest; [ESI+] reshapes the activity Set3C, recruiting RNAPII, interfering with Rap1p binding to activate genes in otherwise repressed subtelomeric domains; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087273"}


id: FYPO:0007059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to late endosomes is decreased.","definition_xrefs":["PMID:31341193","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endosome","termid":"FYPO:0007587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to late endosome","synonyms":[{"name":"decreased protein localisation to late endosome","type":"exact"},{"name":"decreased protein localization to PVE","type":"exact"},{"name":"decreased protein localization to late endosome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to late endosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to prevacuolar compartment","type":"exact"},{"name":"decreased protein localization to prevacuolar endosome","type":"exact"},{"name":"reduced protein localization to late endosome","type":"exact"}],"termid":"FYPO:0007059"}


id: MONDO:0850094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced hearing loss","secondary_identifiers":["DOID:0070310"],"termid":"MONDO:0850094","xrefs":{"Monarch":{"xref_id":"0850094"}}}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: PBO:0048521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 4","termid":"PBO:0048521"}


id: PBO:0076875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX26 antisense RNA 1","termid":"PBO:0076875"}


id: PBO:0027070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_phenotype","termid":"PBO:0027070"}


id: GO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + octadecanoyl-[ACP] + 2 reduced [2Fe-2S]-[ferredoxin] = (9Z)-octadecenoyl-[ACP] + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:11776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"stearoyl-[ACP] desaturase activity","secondary_identifiers":["EC:1.14.19.2","MetaCyc:RXN-7903","KEGG_REACTION:R03370"],"synonyms":[{"name":"acyl-[acyl-carrier-protein] desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein, hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"stearyl acyl carrier protein desaturase activity","type":"related"},{"name":"stearyl-ACP desaturase activity","type":"related"}],"termid":"GO:0045300"}


id: MONDO:0018988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iridocorneal endothelial (ICE) syndrome describes a group of progressive corneal proliferative endotheliopathies comprised of Chandler syndrome, Cogan-Reese syndrome and essential iris atrophy, affecting mainly young adult females and characterized by iris holes and atrophy, papillary distortion, anterior synechiae, corneal edema and often with secondary glaucoma and corneal decompensation as complications","definition_xrefs":["Orphanet:64734"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired eye disease (obsolete MONDO:0015120)","termid":"MONDO:0015120"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glaucoma due to a proliferation and differentiation anomaly (obsolete MONDO:0020221)","termid":"MONDO:0020221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridocorneal endothelial syndrome","secondary_identifiers":["UMLS:C1096100","GARD:60","MedDRA:10053678","SCTID:129623003","icd11.foundation:265074385","MEDGEN:242751","NCIT:C84792","MESH:D057129"],"synonyms":[{"name":"ICE syndrome","type":"exact"}],"termid":"MONDO:0018988","xrefs":{"Monarch":{"xref_id":"0018988"}}}


id: PBO:0005759
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bucentaur or craniofacial development","termid":"PBO:0005759"}


id: MONDO:0015615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic gastroenterological disease (obsolete MONDO:0015615)","secondary_identifiers":["Orphanet:165652"],"synonyms":[{"name":"rare genetic gastrointestinal system disease","type":"exact"}],"termid":"MONDO:0015615","xrefs":{"Monarch":{"xref_id":"0015615"}}}


id: MONDO:0019074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral acute depigmentation of the iris (BADI) is characterized by acute onset of bilateral iris depigmentation, pigment dispersion in the anterior chamber, and heavy pigment deposition in the anterior chamber angle. Patients typically present with acute and usually severe photophobia, blurred vision, red eye, and ocular discomfort or pain with a usually self-limiting clinical course. Cases often occur after a flu-like illness, upper respiratory tract infection, and after the use of oral moxifloxacin. When associated with iris epithelial depigmentation, iris transillumination defects and atonic/mydriatic pupil, the condition is referred to as bilateral acute iris transillumination (BAIT) which has an increased risk of severe intractable rise in intraocular pressure.","definition_xrefs":["Orphanet:69736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bilateral acute depigmentation of the iris","secondary_identifiers":["UMLS:C4304058","SCTID:720460007","GARD:18897","MEDGEN:929727"],"synonyms":[{"name":"BADI","type":"exact"}],"termid":"MONDO:0019074","xrefs":{"Monarch":{"xref_id":"0019074"}}}


id: PBO:0003820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein","termid":"PBO:0003820"}


id: PBO:0072594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 1","termid":"PBO:0072594"}


id: GO:1900405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cell separation after cytokinesis.","definition_xrefs":["GOC:TermGenie","PMID:10491317","GOC:mah","PMID:12665550"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell separation after cytokinesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900405)","synonyms":[{"name":"regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900405"}


id: SO:0001816
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that leads to the change of an amino acid within the protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_synonymous","synonyms":[{"name":"non synonymous","type":"related"}],"termid":"SO:0001816"}


id: PBO:0081210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 2","termid":"PBO:0081210"}


id: GO:0102893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + betanidin = H+ + gomphrenin I + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete betanidin 6-O-glucosyltransferase activity (obsolete GO:0102893)","termid":"GO:0102893"}


id: PBO:0052877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-2, pseudogene","termid":"PBO:0052877"}


id: PBO:0085511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S13 and bacterial S15","termid":"PBO:0085511"}


id: GO:0043961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + (R)-citramalate = succinate + (R)-citramalyl-CoA.","definition_xrefs":["GOC:jl","PMID:17259315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"succinyl-CoA:(R)-citramalate CoA-transferase activity","secondary_identifiers":["EC:2.8.3.20","RHEA:38279","MetaCyc:RXN-8966"],"synonyms":[{"name":"L-carnitine dehydratase/bile acid-inducible protein F","type":"related"},{"name":"succinyl-CoA:(R)-citramalate CoA transferase activity","type":"exact"},{"name":"succinyl-CoA:R-citramalate CoA transferase","type":"exact"}],"termid":"GO:0043961"}


id: PBO:0040865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 2","termid":"PBO:0040865"}


id: GO:0047302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + UDP-2-acetamido-4-amino-2,4,6-trideoxy-D-glucose = L-glutamate + UDP-2-acetamido-4-dehydro-2,6-dideoxy-beta-D-glucose.","definition_xrefs":["PMID:16286454","RHEA:31663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"UDP-2-acetamido-4-amino-2,4,6-trideoxyglucose transaminase activity","secondary_identifiers":["EC:2.6.1.34","KEGG_REACTION:R04529","MetaCyc:RXN-12812"],"synonyms":[{"name":"UDP-2-acetamido-4-amino-2,4,6-trideoxyglucose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"UDP-4-amino-2-acetamido-2,4,6-trideoxyglucose aminotransferase activity","type":"exact"},{"name":"UDP-4-amino-2-acetamido-2,4,6-trideoxyglucose transaminase activity","type":"exact"},{"name":"uridine diphospho-4-amino-2-acetamido-2,4,6-trideoxyglucose aminotransferase activity","type":"related"}],"termid":"GO:0047302"}


id: FYPO:0006377
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to ER","type":"exact"}],"termid":"FYPO:0006377","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0069397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 657, pseudogene","termid":"PBO:0069397"}


id: PR:Q9Y7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.08c","secondary_identifiers":["UniProtKB:Q9Y7R8"],"synonyms":[{"name":"Spom972h-MDH2","type":"exact"}],"termid":"PR:Q9Y7R8"}


id: GO:1901672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic acquired resistance","synonyms":[{"name":"activation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"activation of systemic acquired resistance","type":"narrow"},{"name":"positive regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of systemic acquired resistance","type":"exact"},{"name":"up-regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up-regulation of systemic acquired resistance","type":"exact"},{"name":"upregulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"upregulation of systemic acquired resistance","type":"exact"}],"termid":"GO:1901672"}


id: MONDO:0011826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial glucocorticoid deficiency in which the cause of the disease is a mutation in the MRAP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial glucocorticoid deficiency","termid":"MONDO:0008733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid deficiency 2","secondary_identifiers":["UMLS:C4049714","GARD:15412","MESH:C564577","NANDO:1200409","MEDGEN:891117","OMIM:607398","NCIT:C123728"],"synonyms":[{"name":"GCCD2","type":"related"},{"name":"MRAP familial glucocorticoid deficiency","type":"exact"},{"name":"familial glucocorticoid deficiency 2","type":"related"},{"name":"familial glucocorticoid deficiency caused by mutation in MRAP","type":"exact"},{"name":"glucocorticoid deficiency 2","type":"exact"},{"name":"glucocorticoid deficiency type 2","type":"exact"}],"termid":"MONDO:0011826","xrefs":{"Monarch":{"xref_id":"0011826"}}}


id: MONDO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acquired immunodeficiency","secondary_identifiers":["GARD:21359","MEDGEN:1843453","UMLS:C0596032","Orphanet:310050","icd11.foundation:609223181"],"termid":"MONDO:0017769","xrefs":{"Monarch":{"xref_id":"0017769"}}}


id: GO:0060632
data:
  {"annotated_genes":["SJAG_04597","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062168"},{"annotations":[94750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of microtubule-based movement, the movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based process","termid":"GO:0032886"},{"relation_name":"regulates","term_name":"microtubule-based movement","termid":"GO:0007018"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03073":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule-based movement","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060632","terms_by_termid":{"GO:0062168":null,"GO:1902854":null}}


id: GO:0016189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a synaptic vesicle with an endosome.","definition_xrefs":["PMID:10099709","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"part_of","term_name":"synaptic vesicle endosomal processing","termid":"GO:0099532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle to endosome fusion","termid":"GO:0016189"}


id: SO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an UST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST_match","synonyms":[{"name":"UST match","type":"exact"}],"termid":"SO:0001470"}


id: SO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relatively rare amino acid encoded by the codon UGA in some contexts, whereas UGA is a termination codon in other contexts.","definition_xrefs":["PMID:23275319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine","synonyms":[{"name":"Sec","type":"exact"},{"name":"U","type":"exact"}],"termid":"SO:0001455"}


id: MONDO:0044284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The Gerbich blood group system contains 6 high-prevalence and 5 low-prevalence antigens that are expressed on glycophorin C (GPC), glycophorin D (GPD), or both GPC and GPD. GPC and GPD, which contribute stability to the red blood cell membrane, are encoded by the same gene, GYPC, through the use of alternative translational start sites. Deficiency of GPC and GPD is associated with hereditary elliptocytosis, and Gerbich antigens act as receptors for the malarial parasite Plasmodium falciparum (see OMIM:611162). The Gerbich antibodies anti-Ge2 and anti-Ge3 have caused hemolytic transfusion reactions, and anti-Ge3 has produced hemolytic disease of the fetus and newborn (review by {12:Walker and Reid, 2010}).","definition_xrefs":["OMIM:616089"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group, gerbich system (obsolete MONDO:0044284)","synonyms":[{"name":"GE","type":"related"},{"name":"Gerbich blood Group system","type":"related"},{"name":"blood group, Gerbich","type":"exact"},{"name":"blood group, Gerbich system","type":"related"}],"termid":"MONDO:0044284","xrefs":{"Monarch":{"xref_id":"0044284"}}}


id: PBO:0057825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3144","termid":"PBO:0057825"}


id: PBO:0090093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","termid":"PBO:0090093"}


id: GO:1901955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["GOC:kmv","PMID:23358451","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle transport along microtubule","termid":"GO:1901609"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"negative regulation of dense core granule transport","termid":"GO:1904810"},{"relation_name":"is_a","term_name":"negative regulation of retrograde axon cargo transport","termid":"GO:2001018"},{"relation_name":"negatively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde dense core granule transport","synonyms":[{"name":"down regulation of retrograde dense core granule transport","type":"exact"},{"name":"down-regulation of retrograde dense core granule transport","type":"exact"},{"name":"downregulation of retrograde dense core granule transport","type":"exact"},{"name":"inhibition of retrograde dense core granule transport","type":"narrow"}],"termid":"GO:1901955"}


id: PBO:0081960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein AX, pseudogene","termid":"PBO:0081960"}


id: GO:1902354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any blood vessel endothelial cell delamination that is involved in blood vessel lumen ensheathment.","definition_xrefs":["GOC:dgh","GOC:TermGenie","PMID:23698350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell delamination","termid":"GO:0097497"},{"relation_name":"part_of","term_name":"blood vessel lumen ensheathment","termid":"GO:0097496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell delamination involved in blood vessel lumen ensheathment","termid":"GO:1902354"}


id: GO:0016498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuromedin K, the peptide Asp-Met-His-Asp-Phe-Phe-Val-Gly-Leu-Met to initiate a change in cell activity.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuromedin K receptor activity","synonyms":[{"name":"neurokinin B receptor activity","type":"exact"}],"termid":"GO:0016498"}


id: PATO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular adhesivity","termid":"PATO:0001531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterophilic","termid":"PATO:0001441"}


id: PBO:0005734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set5 (predicted)","termid":"PBO:0005734"}


id: PATO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given area.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Area_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"area density","termid":"PATO:0001351"}


id: MONDO:0015912
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86710,86711],"is_not":false,"summary":null,"term":"MONDO:0015912"}]},"cv_name":"mondo","definition":"An inherited giant platelet disorder with a complex phenotype characterized by congenital thrombocytopenia and possible subsequent manifestations of sensorineural hearing loss, presenile cataracts, elevation of liver enzymes, and/or progressive nephropathy often leading to end-stage renal disease (ESRD). Epstein syndrome, Fechtner syndrome, May-Hegglin anomaly and Sebastian syndrome, previously described as distinct disorders, represent some of the different clinical presentations of MYH9-RD.","definition_xrefs":["Orphanet:182050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1704278","ICD9:582.89","SCTID:234485006","NCIT:C131646","Orphanet:807","Orphanet:850","SCTID:712922002","GARD:180","Orphanet:1984","SCTID:236422008","ICD9:287.33","SCTID:234484005","OMIM:155100","DOID:0060651","MESH:C537831","EFO:0009646","NCIT:C158788","OMIM:153640","OMIM:600208","ICD9:759.89","OMIM:605249","Orphanet:1019","UMLS:C5200934"],"synonyms":[{"name":"Alport syndrome with macrothrombocytopenia","type":"related"},{"name":"Alport syndrome with macrothrombocytopenia, formerly","type":"related"},{"name":"Brodie Chole griffin syndrome","type":"related"},{"name":"Brodie Chole gryphon syndrome","type":"related"},{"name":"Dohle leukocyte inclusions with giant platelets","type":"related"},{"name":"Epstein syndrome","type":"exact"},{"name":"FTNS","type":"related"},{"name":"Fechtner syndrome","type":"exact"},{"name":"MHA","type":"related"},{"name":"MYH-9 related disease","type":"exact"},{"name":"MYH9 related disorders","type":"related"},{"name":"MYH9 related thrombocytopenia","type":"related"},{"name":"MYH9-RD","type":"exact"},{"name":"MYH9-related disease","type":"exact"},{"name":"MYH9-related disorder","type":"exact"},{"name":"MYH9-related syndrome","type":"exact"},{"name":"MYH9-related syndromic thrombocytopenia","type":"exact"},{"name":"May-Hegglin anomaly","type":"exact"},{"name":"May-Hegglin thrombocytopenia","type":"related"},{"name":"SBS","type":"related"},{"name":"Sebastian platelet syndrome","type":"exact"},{"name":"Sebastian syndrome","type":"exact"},{"name":"bleeding disorder, Platelet-type, 6","type":"related"},{"name":"giant platelet syndrome with thrombocytopenia","type":"exact"},{"name":"macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss","type":"exact"},{"name":"macrothrombocytopenia and progressive sensorineural deafness","type":"exact"},{"name":"macrothrombocytopenia progressive deafness","type":"related"},{"name":"macrothrombocytopenia with dispersed leukocytic inclusions","type":"related"},{"name":"macrothrombocytopenia with leukocyte inclusions","type":"related"},{"name":"macrothrombocytopenia, nephritis, and deafness","type":"related"},{"name":"macrothrombocytopenia, nephritis, deafness, and leukocyte inclusions","type":"related"},{"name":"matins","type":"related"}],"termid":"MONDO:0015912","terms_by_termid":{"MONDO:0015912":null},"xrefs":{"Monarch":{"xref_id":"0015912"}}}


id: PBO:0068600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 51, pseudogene","termid":"PBO:0068600"}


id: GO:1902550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any lymphoid lineage cell migration into thymus that is involved in thymus epithelium morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:22342843","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration into thymus","termid":"GO:0097535"},{"relation_name":"part_of","term_name":"thymus epithelium morphogenesis","termid":"GO:0097536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus involved in thymus epithelium morphogenesis","synonyms":[{"name":"lymphoid lineage cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymus epithelium morphogenesis","type":"exact"}],"termid":"GO:1902550"}


id: PBO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0002465"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: MONDO:0024482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma characterized by localized eccrine sweat gland malformation.","definition_xrefs":["NCIT:C5564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland neoplasm","termid":"MONDO:0002090"},{"relation_name":"is_a","term_name":"hamartoma of skin appendage","termid":"MONDO:0021539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eccrine sweat gland hamartoma","secondary_identifiers":["MEDGEN:232145","UMLS:C1333372"],"synonyms":[{"name":"eccrine sweat gland hamartoma","type":"exact"},{"name":"eccrine sweat gland hamartoma (disease)","type":"exact"},{"name":"hamartoma of eccrine sweat gland","type":"exact"},{"name":"hamartoma of the eccrine sweat gland","type":"exact"}],"termid":"MONDO:0024482","xrefs":{"Monarch":{"xref_id":"0024482"}}}


id: PBO:0089654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase protein VIb","termid":"PBO:0089654"}


id: GO:0007070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0007070)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"mitotic repression of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter during mitosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter, mitotic","type":"exact"}],"termid":"GO:0007070"}


id: PBO:0048247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12H","termid":"PBO:0048247"}


id: FYPO:0003555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing in subtelomeric regions is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at subtelomere","synonyms":[{"name":"normal chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at telomere","type":"related"}],"termid":"FYPO:0003555"}


id: MONDO:0003801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell intraepithelial neoplasia that involves the cornea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pre-malignant neoplasm","termid":"MONDO:0000611"},{"relation_name":"is_a","term_name":"cornea neoplasm","termid":"MONDO:0021238"},{"relation_name":"is_a","term_name":"squamous cell intraepithelial neoplasia","termid":"MONDO:0024475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal intraepithelial neoplasm","secondary_identifiers":["MEDGEN:232396","NCIT:C6093","DOID:6198","SCTID:420835009","UMLS:C1333159"],"synonyms":[{"name":"cornea intraepithelial neoplasia","type":"exact"},{"name":"cornea squamous cell intraepithelial neoplasia","type":"exact"},{"name":"corneal intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of cornea","type":"exact"},{"name":"intraepithelial neoplasia of the cornea","type":"exact"}],"termid":"MONDO:0003801","xrefs":{"Monarch":{"xref_id":"0003801"}}}


id: FYPO:0000325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}


id: PATO:0001435
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having connection or association with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attachment quality","termid":"PATO:0001435"}


id: PBO:0058682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6810","termid":"PBO:0058682"}


id: PBO:0081319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 2","termid":"PBO:0081319"}


id: PBO:0083257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; large scale expression analysis showed an increase in mRNA accumulation in strains mutant for exosome components","termid":"PBO:0083257"}


id: GO:1905896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular response to tunicamycin.","definition_xrefs":["GOC:aruk","GOC:TermGenie","GOC:bc","GO_REF:0000058","PMID:21803450"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular response to tunicamycin (obsolete GO:1905896)","synonyms":[{"name":"activation of cellular response to tunicamycin","type":"narrow"},{"name":"up regulation of cellular response to tunicamycin","type":"exact"},{"name":"up-regulation of cellular response to tunicamycin","type":"exact"},{"name":"upregulation of cellular response to tunicamycin","type":"exact"}],"termid":"GO:1905896"}


id: FYPO:0003777
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum","termid":"FYPO:0006377"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"abnormal protein localization to ER during vegetative growth","type":"exact"},{"name":"abnormal protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003777","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0072188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 5","termid":"PBO:0072188"}


id: PBO:0064468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 2","termid":"PBO:0064468"}


id: GO:0032785
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of DNA-templated transcription, elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA elongation","type":"broad"},{"name":"down-regulation of RNA elongation","type":"broad"},{"name":"downregulation of RNA elongation","type":"broad"},{"name":"inhibition of RNA elongation","type":"broad"},{"name":"negative regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"negative regulation of transcription elongation","type":"broad"},{"name":"negative regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"negative regulation of transcriptional elongation","type":"broad"},{"name":"negative transcription elongation regulator activity","type":"related"}],"termid":"GO:0032785","terms_by_termid":{"GO:0034244":null}}


id: FYPO:0003357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to filipin. Cells stop growing (and may die) at a concentration of filipin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to filipin","synonyms":[{"name":"hypersensitive to filipin","type":"exact"},{"name":"sensitive to filipin during mitotic cell cycle","type":"related"},{"name":"sensitive to filipin during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003357"}


id: PBO:0065037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 2","termid":"PBO:0065037"}


