# terms

id: MONDO:0016775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichen planus (LP) pemphigoides is a rare cross-over syndrome between lichen planus and bullous pemphigoid.","definition_xrefs":["Orphanet:254478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus pemphigoides","secondary_identifiers":["icd11.foundation:1373932539","MEDGEN:590352","GARD:12677","SCTID:238653005","UMLS:C0406369"],"synonyms":[{"name":"LP pemphigoides","type":"exact"}],"termid":"MONDO:0016775","xrefs":{"Monarch":{"xref_id":"0016775"}}}


id: PBO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 2","termid":"PBO:0048719"}


id: GO:0050805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"negatively_regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic transmission","synonyms":[{"name":"down regulation of synaptic transmission","type":"exact"},{"name":"down-regulation of synaptic transmission","type":"exact"},{"name":"downregulation of synaptic transmission","type":"exact"},{"name":"inhibition of synaptic transmission","type":"narrow"}],"termid":"GO:0050805"}


id: MONDO:0009695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myeloproliferative disease, autosomal recessive","secondary_identifiers":["OMIM:254700","UMLS:C1850779","MEDGEN:338119","MESH:C564977"],"synonyms":[{"name":"myeloproliferative disease, autosomal recessive","type":"exact"}],"termid":"MONDO:0009695","xrefs":{"Monarch":{"xref_id":"0009695"}}}


id: GO:0033139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the phosphorylation of a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation","termid":"GO:0033135"},{"relation_name":"regulates","term_name":"serine phosphorylation of STAT protein","termid":"GO:0042501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-serine phosphorylation of STAT protein","secondary_identifiers":["GO:1903261"],"synonyms":[{"name":"regulation of serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0033139"}


id: PBO:0084749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial malic enzyme; catalyzes the oxidative decarboxylation of malate to pyruvate, which is a key intermediate in sugar metabolism and a precursor for synthesis of several amino acids","termid":"PBO:0084749"}


id: MONDO:0003019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder caused by an insufficient amount or availability of potassium, which generally manifests with myalgia, tetany, hypotension, polyuria, and polydipsia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"potassium deficiency disease","secondary_identifiers":["HP:0002900","DOID:4500","ICD9:276.8","MESH:D007008","SCTID:43339004","ICD10CM:E87.6","NCIT:C34939","UMLS:C1514284","MEDGEN:271346"],"synonyms":[{"name":"hypokalemia","type":"exact"},{"name":"hypopotassemia","type":"related"},{"name":"potassium deficiency disorder","type":"related"}],"termid":"MONDO:0003019","xrefs":{"Monarch":{"xref_id":"0003019"}}}


id: GO:0008694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-octaprenyl-4-hydroxy benzoate = 2-octaprenylphenol + CO2.","definition_xrefs":["MetaCyc:3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity","secondary_identifiers":["RHEA:27778","GO:0019167","EC:4.1.1.98"],"synonyms":[{"name":"3-octaprenyl-4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl 4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl-4-hydroxybenzoate carboxy-lyase activity","type":"exact"},{"name":"PPHB decarboxylase activity","type":"exact"},{"name":"UbiD","type":"related"},{"name":"UbiX","type":"related"},{"name":"polyprenyl p-hydroxybenzoate decarboxylase activity","type":"exact"}],"termid":"GO:0008694"}


id: PBO:0056180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor F","termid":"PBO:0056180"}


id: MONDO:0020454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital complete agenesis of pericardium is a rare, mostly asymptomatic, congenital heart malformation characterized by the complete absence of the entire pericardium, or by the absence of either the right (uncommon) or left pericardium. It is occasionally associated with chest pain (common), dyspnea, dizziness, bradycardia and syncope, while exertional manifestations are rare. The disease is usually incidentally diagnosed during surgery or at autopsy.","definition_xrefs":["Orphanet:99129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pericardium anomaly","termid":"MONDO:0017300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital complete agenesis of pericardium","secondary_identifiers":["GARD:19666"],"termid":"MONDO:0020454","xrefs":{"Monarch":{"xref_id":"0020454"}}}


id: GO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac atrium over time, from its formation to the mature structure. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac atrium development","termid":"GO:0003230"}


id: PBO:0084693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0084693"}


id: MONDO:0007466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA, satellite, 3","secondary_identifiers":["OMIM:126370"],"synonyms":[{"name":"D1Z1","type":"related"},{"name":"DNA, satellite, III","type":"related"},{"name":"DNA, satellite, type 3","type":"exact"},{"name":"HS3","type":"related"}],"termid":"MONDO:0007466","xrefs":{"Monarch":{"xref_id":"0007466"}}}


id: PBO:0047709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 3","termid":"PBO:0047709"}


id: GO:0015324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of peptide-acetyl-CoA from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide-acetyl-CoA secondary active transmembrane transporter activity (obsolete GO:0015324)","synonyms":[{"name":"peptide-acetyl-CoA transporter activity","type":"related"}],"termid":"GO:0015324"}


id: MONDO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalitis (obsolete MONDO:0004825)","termid":"MONDO:0004825","xrefs":{"Monarch":{"xref_id":"0004825"}}}


id: GO:0033296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of rhamnose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"rhamnose binding","termid":"GO:0033296"}


id: GO:0103087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(5'-methylthio)pentylmalate = H+ + 2-oxo-8-methylthiooctanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiopentylmalate dehydrogenase activity (obsolete GO:0103087)","termid":"GO:0103087"}


id: GO:0047976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-hamamelose + ATP = D-hamamelose 2'-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.102","RHEA:22796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hamamelose kinase activity","secondary_identifiers":["KEGG_REACTION:R03766","MetaCyc:HAMAMELOSE-KINASE-RXN"],"synonyms":[{"name":"ATP/hamamelose 2'-phosphotransferase activity","type":"related"},{"name":"ATP:D-hamamelose 2'-phosphotransferase activity","type":"related"},{"name":"hamamelose kinase (phosphorylating)","type":"related"},{"name":"hamamelosekinase (ATP: hamamelose 2'-phosphotransferase)","type":"related"}],"termid":"GO:0047976"}


id: PBO:0079029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-2","termid":"PBO:0079029"}


id: PBO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2C subunit","termid":"PBO:0002262"}


id: PBO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXS family protein","termid":"PBO:0000405"}


id: PBO:0066133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASSF10 divergent transcript","termid":"PBO:0066133"}


id: PBO:0091005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1708 family conserved fungal protein, cell division site","termid":"PBO:0091005"}


id: PBO:0058843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8072","termid":"PBO:0058843"}


id: GO:0061450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Trophoblast cell migration that is accomplished by extension and retraction of a pseudopodium. Trophoblast cells line the outside of the blastocyst.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"embryo implantation","termid":"GO:0007566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophoblast cell migration","termid":"GO:0061450"}


id: PBO:0012017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialar to S. pombe SPAC1F8.07c (paralog)","termid":"PBO:0012017"}


id: MONDO:0017541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central polydactyly of toes, unilateral (obsolete MONDO:0017541)","secondary_identifiers":["Orphanet:295183"],"synonyms":[{"name":"mesoaxial polydactyly of toes, unilateral","type":"exact"},{"name":"mirror foot, unilateral","type":"exact"}],"termid":"MONDO:0017541","xrefs":{"Monarch":{"xref_id":"0017541"}}}


id: PBO:0071732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 30","termid":"PBO:0071732"}


id: FYPO:0007542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of double-stranded DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"normal double-stranded DNA binding","synonyms":[{"name":"normal dsDNA binding","type":"exact"}],"termid":"FYPO:0007542"}


id: GO:0052412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall pectin (obsolete GO:0052412)","termid":"GO:0052412"}


id: FYPO:0001805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which adenine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal adenine import","synonyms":[{"name":"normal adenine import across plasma membrane","type":"exact"},{"name":"normal adenine import during mitotic cell cycle","type":"related"},{"name":"normal adenine import during vegetative growth","type":"exact"},{"name":"normal adenine import into cell","type":"exact"},{"name":"normal adenine uptake","type":"exact"}],"termid":"FYPO:0001805"}


id: PR:Q9P6I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.09","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc16","type":"exact"},{"name":"ubiquitin carrier protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I1"}


id: PBO:0090917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis complex WD repeat protein subunit Dph7","termid":"PBO:0090917"}


id: PBO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta subunit","termid":"PBO:0090462"}


id: MONDO:0020349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute motor axonal neuropathy (AMAN) is a pure motor axonal form of Guillain-Barre syndrome (GBS).","definition_xrefs":["Orphanet:98918"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Guillain-Barre syndrome, familial","termid":"MONDO:0007691"},{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute motor axonal neuropathy","secondary_identifiers":["UMLS:C3890941","icd11.foundation:745197078","GARD:19602","MEDGEN:855842","SCTID:715770009","NCIT:C116929"],"synonyms":[{"name":"AMAN","type":"exact"},{"name":"acute pure motor GBS","type":"exact"},{"name":"acute pure motor Guillain-Barre syndrome","type":"exact"},{"name":"acute pure motor Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0020349","xrefs":{"Monarch":{"xref_id":"0020349"}}}


id: PBO:0057417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548s","termid":"PBO:0057417"}


id: PBO:0027179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_heterochromatin_assembly_involved_in_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027179"}


id: PBO:0027955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxamine-phosphate_oxidase_activity","termid":"PBO:0027955"}


id: PBO:0058463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5192","termid":"PBO:0058463"}


id: GO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which nuclear pores are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear pore localization","secondary_identifiers":["GO:0031081"],"synonyms":[{"name":"establishment and maintenance of nuclear pore localization","type":"exact"},{"name":"nuclear pore distribution","type":"related"},{"name":"nuclear pore localisation","type":"exact"},{"name":"positioning of nuclear pores","type":"related"}],"termid":"GO:0051664"}


id: MONDO:0007763
data:
  {"annotated_genes":["SJAG_03787","SJAG_00440","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87131,87132,87133],"is_not":false,"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_02231":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"nonpapillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050387","OMIM:144700"],"synonyms":[{"name":"CCRCC","type":"narrow"},{"name":"RCC","type":"related"},{"name":"adenocarcinoma of kidney","type":"related"},{"name":"clear cell renal cell adenocarcinoma","type":"narrow"},{"name":"clear cell renal cell carcinoma","type":"narrow"},{"name":"hypernephroma","type":"related"},{"name":"nonpapillary renal carcinoma 1 locus","type":"related"},{"name":"renal carcinoma, chromophobe, somatic","type":"exact"},{"name":"renal cell carcinoma","type":"broad"},{"name":"renal cell carcinoma, clear cell","type":"exact"},{"name":"renal cell carcinoma, clear cell, somatic","type":"exact"},{"name":"renal cell carcinoma, nonpapillary","type":"related"},{"name":"renal cell carcinoma, somatic","type":"exact"}],"termid":"MONDO:0007763","terms_by_termid":{"MONDO:0007763":null},"xrefs":{"Monarch":{"xref_id":"0007763"}}}


id: PBO:0058495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR5689 host gene","termid":"PBO:0058495"}


id: GO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of existing blood vessels.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel remodeling","synonyms":[{"name":"blood vessel remodelling","type":"exact"}],"termid":"GO:0001974"}


id: MONDO:0004010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating urothelial carcinoma","termid":"MONDO:0040678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating renal pelvis/ureter urothelial carcinoma","secondary_identifiers":["MEDGEN:268273","NCIT:C39879","UMLS:C1512750"],"synonyms":[{"name":"infiltrating renal pelvis and ureter transitional cell carcinoma","type":"exact"},{"name":"infiltrating renal pelvis and ureter urothelial carcinoma","type":"exact"},{"name":"infiltrating ureter transitional cell carcinoma","type":"narrow"}],"termid":"MONDO:0004010","xrefs":{"Monarch":{"xref_id":"0004010"}}}


id: PR:Q09175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- krp1 gene.","definition_xrefs":["UniProtKB:Q09175","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dibasic-processing endoprotease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.09c","synonyms":[{"name":"KEX2-related protease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-krp1","type":"exact"}],"termid":"PR:Q09175"}


id: PBO:0029509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_population_(obsolete_FYPO:0002206)","termid":"PBO:0029509"}


id: GO:0052849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 NADP+ + tetrahydrocurcumin = curcumin + 2 H+ + 2 NADPH.","definition_xrefs":["RHEA:34815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"curcumin reductase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN0-6676"],"synonyms":[{"name":"NADPH-dependent curcumin reductase activity","type":"exact"}],"termid":"GO:0052849"}


id: MONDO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anterior segment dysgenesis in which the cause of the disease is a mutation in the PXDN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"},{"relation_name":"is_a","term_name":"sclerocornea","termid":"MONDO:0019629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 7","secondary_identifiers":["MEDGEN:462967","DOID:0080612","OMIM:269400","GARD:17327","UMLS:C3151617","Orphanet:289499"],"synonyms":[{"name":"ASGD7","type":"related"},{"name":"CCMCO","type":"exact"},{"name":"COPOA","type":"related"},{"name":"PXDN anterior segment dysgenesis","type":"exact"},{"name":"PXDN-related ocular dysgenesis","type":"exact"},{"name":"anterior segment dysgenesis 7","type":"exact"},{"name":"anterior segment dysgenesis 7, with sclerocornea","type":"exact"},{"name":"anterior segment dysgenesis caused by mutation in PXDN","type":"exact"},{"name":"congenital cataract microcornea with corneal opacity","type":"related"},{"name":"corneal opacification and other ocular anomalies","type":"related"},{"name":"corneal opacification with Other ocular anomalies","type":"related"},{"name":"corneal opacification with other ocular anomalies","type":"related"},{"name":"sclerocornea with Other ocular anomalies","type":"related"},{"name":"sclerocornea with other ocular anomalies","type":"exact"}],"termid":"MONDO:0010015","xrefs":{"Monarch":{"xref_id":"0010015"}}}


id: GO:0031867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP4 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"EP4 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP4 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP4 receptor binding","type":"exact"}],"termid":"GO:0031867"}


id: MONDO:1011505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrocartilaginous embolic myelopathy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrocartilaginous embolic myelopathy, non-human animal","termid":"MONDO:1011445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrocartilaginous embolic myelopathy, horse","secondary_identifiers":["OMIA:001120-9796"],"termid":"MONDO:1011505","xrefs":{"Monarch":{"xref_id":"1011505"}}}


id: PATO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of being rigid and resistant to pressure and fibrous.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard","termid":"PATO:0000386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scirrhous","termid":"PATO:0002127"}


id: PBO:0074710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74B","termid":"PBO:0074710"}


id: GO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root cap; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root cap mucilage metabolic process","termid":"GO:0048360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap mucilage biosynthetic process","synonyms":[{"name":"root cap mucilage anabolism","type":"exact"},{"name":"root cap mucilage biosynthesis","type":"exact"},{"name":"root cap mucilage formation","type":"exact"},{"name":"root cap mucilage synthesis","type":"exact"}],"termid":"GO:0048355"}


id: MOD:01274
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-histidine residue.","definition_xrefs":["Unimod:276#H","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N'-[4-(2-aminoethyl)benzenesulfonyl] derivatized histidine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01274"}


id: GO:0005545
data:
  {"annotated_genes":["SJAG_01722","SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74034,108522],"is_not":false,"summary":null,"term":"GO:0005545"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylinositol, a glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01722":null,"SJAG_01748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"1-phosphatidylinositol binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005545","terms_by_termid":{"GO:0005545":null}}


id: PBO:0078297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-2","termid":"PBO:0078297"}


id: PBO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1 (predicted)","termid":"PBO:0013796"}


id: PBO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0004186"}


id: GO:0022607
data:
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id: MONDO:1011612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, dog","secondary_identifiers":["OMIA:001056-9615"],"termid":"MONDO:1011612","xrefs":{"Monarch":{"xref_id":"1011612"}}}


id: PBO:0067149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 199, pseudogene","termid":"PBO:0067149"}


id: PBO:0082160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine 5'-monophosphoramidase; interacts physically and genetically with Kin28p, a CDK and TFIIK subunit, and genetically with CAK1; member of histidine triad (HIT) superfamily of nucleotide-binding proteins; protein abundance increases in response to DNA replication stress; human homolog HINT1 can complement yeast hnt1 mutant","termid":"PBO:0082160"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: PBO:0060458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAIP pseudogene 1","termid":"PBO:0060458"}


id: FYPO:0007157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal histone binding","termid":"FYPO:0007157"}


id: GO:0072655
data:
  {"annotated_genes":["SJAG_00564","SJAG_02361","SJAG_01405","SJAG_04996","SJAG_05259","SJAG_01917","SJAG_01442","SJAG_01004","SJAG_03633","SJAG_02809","SJAG_02355","SJAG_04072","SJAG_01951","SJAG_04218","SJAG_01684","SJAG_00373","SJAG_03358","SJAG_01640","SJAG_02397","SJAG_05302","SJAG_02016","SJAG_04336","SJAG_02034","SJAG_00196","SJAG_01560","SJAG_00404","SJAG_03648","SJAG_07010","SJAG_04014","SJAG_03560","SJAG_01780","SJAG_02797","SJAG_00569","SJAG_01597","SJAG_03502","SJAG_01615","SJAG_02077","SJAG_00687","SJAG_05300","SJAG_03515","SJAG_02398","SJAG_04432","SJAG_03416","SJAG_04641","SJAG_02524","SJAG_01647","SJAG_01120","SJAG_03415","SJAG_04208","SJAG_02917","SJAG_01949","SJAG_01879","SJAG_04533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95385,97463,98816],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[77538,77919],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[94853,99752,112107,103599,115532,91234,117548,106497,103012,99866,89880,88672,99568,107904,100640,117080,97215,107882,107825,110187,105511],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[74347,107905,116569,88998,113503,78226,73839,103240,90730,75974,107883],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[74792,78646,78905,58340,78856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[59100,110358,110711,98557,98908,70315,76948,107884,112101],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[78562,77198,80559,80328,70203,102527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[102777,98721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to the mitochondrion or a part of the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitochondrion","termid":"GO:0070585"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to mitochondrion","type":"exact"},{"name":"establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:0072655","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0160203":null}}


id: PBO:0045279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 30","termid":"PBO:0045279"}


id: PBO:0087449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Aim21p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; TcTex1-type dynein light chain family member; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0087449"}


id: MONDO:0009205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Faciocardiorenal syndrome is a very rare syndrome characterized by intellectual deficit, horseshoe kidney, and congenital heart defects.","definition_xrefs":["Orphanet:1973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faciocardiorenal syndrome","secondary_identifiers":["UMLS:C0795936","MESH:C536388","GARD:2230","MEDGEN:208649","OMIM:227280","SCTID:723333000"],"synonyms":[{"name":"Eastman Bixler syndrome","type":"related"},{"name":"Eastman-Bixler syndrome","type":"exact"},{"name":"faciocardiorenal syndrome","type":"exact"}],"termid":"MONDO:0009205","xrefs":{"Monarch":{"xref_id":"0009205"}}}


id: PATO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's structureresembling an irregular meshwork with cross-linking struts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trabecular","termid":"PATO:0002121"}


id: GO:0009195
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009195","terms_by_termid":{"GO:0006256":null}}


id: PBO:0090012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase Oar2","termid":"PBO:0090012"}


id: PBO:0054504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1904","termid":"PBO:0054504"}


id: MOD:01893
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-malonyl-L-lysine.","definition_xrefs":["PubMed:21908771","PubMed:8349414","RESID:AA0568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-malonyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(carboxyacetyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(carboxyacetyl)azanyl]hexanoic acid","type":"exact"},{"name":"MOD_RES N6-malonyllysine","type":"exact"},{"name":"N(epsilon)-(malonyl)lysine","type":"exact"},{"name":"N6-(carboxyacetyl)lysine","type":"exact"},{"name":"N6-malonyl-L-lysine","type":"exact"},{"name":"N6-malonyllysine","type":"exact"},{"name":"malonyllysine","type":"exact"}],"termid":"MOD:01893"}


id: PBO:0066648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 2","termid":"PBO:0066648"}


id: GO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which is converted to a bending motion.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:hla","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dynein complex","termid":"GO:0030286"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"axonemal dynein complex","synonyms":[{"name":"axonemal dynein heavy chain","type":"narrow"},{"name":"axonemal dynein intermediate chain","type":"narrow"},{"name":"axonemal dynein intermediate light chain","type":"narrow"},{"name":"axonemal dynein light chain","type":"narrow"}],"termid":"GO:0005858"}


id: GO:0050538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-2-amino acid + H2O = L-2-amino acid + NH3 + CO2. The N-carbamoyl-L-2-amino acid is a 2-ureido carboxylate.","definition_xrefs":["MetaCyc:3.5.1.87-RXN","EC:3.5.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-carbamoyl-L-amino-acid hydrolase activity","secondary_identifiers":["RHEA:17581"],"synonyms":[{"name":"L-carbamoylase activity","type":"related"},{"name":"N-carbamoyl-L-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050538"}


id: PBO:0059089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 2","termid":"PBO:0059089"}


id: GO:0009323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of an acetyl group to ribosomal-protein alanine, forming ribosomal-protein acetylalanine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal-protein-alanine N-acetyltransferase complex (obsolete GO:0009323)","termid":"GO:0009323"}


id: GO:0070347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brown fat cell proliferation","synonyms":[{"name":"regulation of brown adipocyte proliferation","type":"exact"},{"name":"regulation of brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070347"}


id: MONDO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Riedel's fibrosing thyroiditis (obsolete MONDO:0001948)","termid":"MONDO:0001948","xrefs":{"Monarch":{"xref_id":"0001948"}}}


id: GO:0120527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + an aliphatic (Z)-desulfo-glucosinolate = a (Z)-omega-(methylsulfanyl)-N-sulfo-alkylhydroximate S-glucoside + adenosine 3',5'-bisphosphate + H+.","definition_xrefs":["RHEA:52724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"aliphatic desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-18179","EC:2.8.2.38"],"termid":"GO:0120527"}


id: FYPO:0008140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal nuclear envelope morpbology in the vegetative growth phase of the life cycle in which the nuclear envelope lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"dilated nuclear envelope lumen","termid":"FYPO:0008140"}


id: PBO:0046910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E2","termid":"PBO:0046910"}


id: PBO:0043714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 2","termid":"PBO:0043714"}


id: PBO:0056429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 2","termid":"PBO:0056429"}


id: PBO:0066318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with multiple splicing-like pseudogene","termid":"PBO:0066318"}


id: MONDO:0010972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized principally by Sprengel anomaly (upward displacement of the scapula) and hydrocephaly. Other anomalies such as psychomotor retardation, psychosis, brachydactyly, and costovertebral dysplasia may also be present.","definition_xrefs":["Orphanet:2180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus-costovertebral dysplasia-Sprengel anomaly syndrome","secondary_identifiers":["OMIM:600991","SCTID:721229003","GARD:5518","MEDGEN:764174","UMLS:C3551260","MESH:C536461"],"synonyms":[{"name":"Ferlini-Ragno-Calzolari syndrome","type":"exact"},{"name":"Waaler-Aarskog syndrome","type":"exact"},{"name":"hydrocephalus, Sprengel anomaly, and costovertebral dysplasia","type":"related"},{"name":"hydrocephalus, costovertebral dysplasia, and Sprengel anomaly","type":"related"},{"name":"hydrocephalus, skeletal anomalies, and mental disturbance","type":"related"}],"termid":"MONDO:0010972","xrefs":{"Monarch":{"xref_id":"0010972"}}}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: PBO:0043931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRPPA antisense RNA 1","termid":"PBO:0043931"}


id: PBO:0059276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L36","termid":"PBO:0059276"}


id: PBO:0071620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 38","termid":"PBO:0071620"}


id: PBO:0066679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 1","termid":"PBO:0066679"}


id: PATO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000469 high (obsolete PATO:0000469)","termid":"PATO:0000469"}


id: SO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structural sequence alteration or rearrangement encompassing one or more genome fragments, with 4 or more breakpoints.","definition_xrefs":["SO:ke","FB:reference_manual","NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"},{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_structural_alteration","secondary_identifiers":["SO:1000146"],"synonyms":[{"name":"complex","type":"related"},{"name":"complex chromosomal mutation","type":"exact"},{"name":"complex_chromosomal_mutation","type":"exact"}],"termid":"SO:0001784"}


id: MONDO:0006737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Slow or difficult obstetric labor or childbirth.","definition_xrefs":["MESH:D004420"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystocia","secondary_identifiers":["UMLS:C0013418","EFO:1000911","MEDGEN:3939"],"termid":"MONDO:0006737","xrefs":{"Monarch":{"xref_id":"0006737"}}}


id: PBO:0030372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cobalt","termid":"PBO:0030372"}


id: PBO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resolution_of_meiotic_recombination_intermediates_with_crossover_formation","termid":"PBO:0030172"}


id: FYPO:0000227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype observed in the vegetative growth phase of the life cycle in which one or more chromosome or minichromosome is not correctly segregated to either daughter cells during mitosis.","definition_xrefs":["PMID:11809834","PMID:20211136","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"chromosome loss during mitotic chromosome segregation","synonyms":[{"name":"chromosome loss during mitotic sister chromatid segregation","type":"exact"},{"name":"chromosome loss during segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome loss","type":"exact"}],"termid":"FYPO:0000227"}


id: FYPO:0008362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population contain variable numbers of lipid droplets. Some cells may contain more or less lipid droplets than normal, while others may lack any detectable lipid droplets.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cellular lipid droplet content","termid":"FYPO:0008362"}


id: PBO:0045543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 3 like","termid":"PBO:0045543"}


id: MONDO:1010786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary generalized severe hyperkeratosis with a formation of a strongly wrinkled, thickened and scaling skin in dogs due to a variation in the SLC27A4 gene.","definition_xrefs":["PMID:26506231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis SLC27A4-related, dog","secondary_identifiers":["OMIA:001973-9615"],"termid":"MONDO:1010786","xrefs":{"Monarch":{"xref_id":"1010786"}}}


id: PBO:0061829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-GlcNAcase","termid":"PBO:0061829"}


id: GO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipopolysaccharide and transmitting the signal across the cell membrane to initiate an innate immune response. Lipopolysaccharides (LPS) are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:14609719","PMID:15379975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipopolysaccharide immune receptor activity","synonyms":[{"name":"LPS receptor activity","type":"exact"},{"name":"endotoxin receptor activity","type":"broad"},{"name":"lipopolysaccharide receptor activity","type":"broad"}],"termid":"GO:0001875"}


id: PBO:0041089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bombesin receptor subtype 3","termid":"PBO:0041089"}


id: GO:0018991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive behavior that results in the deposition of eggs (either fertilized or not) upon a surface or into a medium such as water.","definition_xrefs":["PMID:31164023","PMID:18050396","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg-laying behavior","secondary_identifiers":["GO:0060403","Wikipedia:Oviposition"],"synonyms":[{"name":"egg laying","type":"broad"},{"name":"egg-laying","type":"broad"},{"name":"oviposition","type":"exact"},{"name":"post-mating oviposition","type":"narrow"}],"termid":"GO:0018991"}


id: MONDO:0007316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arnold-Chiari malformation type I is a central nervous system malformation characterized by caudal displacement of the cerebellar tonsils exceeding 5mm below the foramen magnum with or without syringomyelia. Symptoms vary in onset and severity and include suboccipital headache, neck pain, vertigo, tinnitus, ocular symptoms (diplopia, blurred vision, photofobia, nystagmus), lower cranial nerve signs, cerebellar ataxia, and spasticity. Some affected individuals can be asymptomatic.","definition_xrefs":["Orphanet:268882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"},{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Chiari malformation type I","secondary_identifiers":["MedDRA:10056944","UMLS:C0750929","GARD:9233","OMIM:118420","SCTID:253185002","icd11.foundation:1383121646","MEDGEN:196689"],"synonyms":[{"name":"Arnold-Chiari malformation type 1","type":"exact"},{"name":"Arnold-Chiari malformation type I","type":"exact"},{"name":"Chiari malformation type 1","type":"exact"},{"name":"Chiari malformation type 1 with syringomyelia","type":"related"},{"name":"Chiari malformation type I","type":"exact"},{"name":"Cm1","type":"related"},{"name":"Cm1 with syringomyelia","type":"related"}],"termid":"MONDO:0007316","xrefs":{"Monarch":{"xref_id":"0007316"}}}


id: MONDO:0800389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to monochloroacetic acid.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochloroacetic acid poisoning","termid":"MONDO:0800389","xrefs":{"Monarch":{"xref_id":"0800389"}}}


id: PBO:0078174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-5","termid":"PBO:0078174"}


id: GO:0150007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Clathrin-dependent endocytosis of presynaptic membrane regions comprising synaptic vesicles' membrane constituents. This is a relatively slow process occurring in the range of tens of seconds.","definition_xrefs":["PMID:26430111","GOC:aruk","PMID:18579735","PMID:18579748","PMID:16982422","GOC:ha","PMID:28391090","GOC:bc","PMID:27252645","PMID:4348786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"},{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"clathrin-dependent synaptic vesicle endocytosis","termid":"GO:0150007"}


id: PBO:0026731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026731"}


id: GO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 neuromedin U receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromedin U receptor binding","termid":"GO:0042922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 neuromedin U receptor binding","synonyms":[{"name":"type 1 neuromedin U receptor ligand","type":"narrow"}],"termid":"GO:0031839"}


id: GO:1900150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to fungus.","definition_xrefs":["GOC:dhl","PMID:22242006","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to fungus","secondary_identifiers":["GO:2000072"],"synonyms":[{"name":"regulation of defence response to fungi","type":"exact"},{"name":"regulation of defence response to fungus","type":"exact"},{"name":"regulation of defense response to fungi","type":"exact"},{"name":"regulation of defense response to fungi, incompatible interaction","type":"narrow"},{"name":"regulation of defense response to fungus, incompatible interaction","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungi","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungus","type":"narrow"},{"name":"regulation of response to pathogenic fungus (incompatible interaction)","type":"narrow"}],"termid":"GO:1900150"}


id: GO:0033078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway independent of the thymus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extrathymic T cell differentiation","synonyms":[{"name":"extrathymic T cell development","type":"related"}],"termid":"GO:0033078"}


id: GO:0015221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lipopolysaccharides from one side of a membrane to the other. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lipopolysaccharide transmembrane transporter activity","synonyms":[{"name":"LPS transmembrane transporter activity","type":"exact"}],"termid":"GO:0015221"}


id: GO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP+ = D-glyceraldehyde 3-phosphate + H+ + NADPH.","definition_xrefs":["RHEA:19773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate 1-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.1.1.177-RXN","EC:1.1.1.177","KEGG_REACTION:R00845"],"synonyms":[{"name":"L-glycerol 3-phosphate:NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerol phosphate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:NADP+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047014"}


id: PBO:0080148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAV3 antisense RNA 1","termid":"PBO:0080148"}


id: GO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine via the intermediates alpha-aminoadipic acid and saccharopine. This pathway is used by yeast and fungi to synthesize the essential amino acid L-lysine, and pathway intermediates are often incorporated into secondary metabolic processes. The pathway proceeds as follows: alpha-ketoglutarate is converted to homocitrate, which is metabolized to 3-carboxyhex-2-enedioate and then homoisocitrate. This is then decarboxylated to form alpha-ketoadipate, which is then converted to alpha-aminoadipate. This is then reduced to form alpha-aminoadipate 6-semialdehyde, which is metabolized to saccharopine and finally L-lysine.","definition_xrefs":["MetaCyc:LYSINE-AMINOAD-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:0051975"}


id: GO:0019650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into butanediol; effected by some members of the Enterobacteriaceae, e.g. Enterobacter, Erwinia, Klebsiella, and Serratia.","definition_xrefs":["GOC:dph","ISBN:0198506732","GOC:nr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"},{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"glycolytic fermentation to butanediol","secondary_identifiers":["GO:0030646","Wikipedia:Butanediol_fermentation"],"synonyms":[{"name":"butanediol fermentation","type":"exact"},{"name":"glucose catabolic process to butanediol","type":"exact"},{"name":"glucose fermentation to butanediol","type":"exact"}],"termid":"GO:0019650"}


id: PBO:0058568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6510","termid":"PBO:0058568"}


id: PBO:0043213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 6","termid":"PBO:0043213"}


id: MONDO:0018883
data:
  {"annotated_genes":["SJAG_01537","SJAG_01957"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"}]},"cv_name":"mondo","definition":"A lipodystrophy characterized by the association of lipoatrophy, hypertriglyceridemia, hepatomegaly and acromegaloid features. BSCL belongs to the group of extreme insulin resistance syndromes, which also includes leprechaunism, Rabson-Mendenhall syndrome, acquired generalized lipodystrophy, and types A and B insulin resistance.","definition_xrefs":["Orphanet:528"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01537":null,"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Berardinelli-Seip congenital lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200465","ICD9:250.80","MedDRA:10024603","NCIT:C84594","GARD:13388","icd11.foundation:641763399","SCTID:127012008","NANDO:1200859","icd11.foundation:1628738474"],"synonyms":[{"name":"BSCL","type":"exact"},{"name":"Beradinelli-Seip syndrome","type":"exact"},{"name":"Berardinelli Seip syndrome","type":"exact"},{"name":"Berardinelli lipodystrophy syndrome","type":"exact"},{"name":"Brunzell syndrome","type":"exact"},{"name":"GCL","type":"exact"},{"name":"Lawrence-Seip syndrome","type":"related"},{"name":"Seip-Bernardinelli syndrome","type":"exact"},{"name":"congenital generalised lipodystrophy","type":"related"},{"name":"congenital generalized lipodystrophy","type":"related"},{"name":"generalised congenital lipodystrophy","type":"exact"},{"name":"generalized congenital lipodystrophy","type":"exact"},{"name":"lipoatrophic diabetes","type":"related"},{"name":"total lipodystrophy","type":"exact"}],"termid":"MONDO:0018883","terms_by_termid":{"MONDO:0010020":null,"MONDO:0012071":null},"xrefs":{"Monarch":{"xref_id":"0018883"}}}


id: PBO:0076823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5B","termid":"PBO:0076823"}


id: GO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"narrow"}],"termid":"GO:0030613"}


id: PBO:0042873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 119","termid":"PBO:0042873"}


id: GO:0097078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the 18S rRNA biogenesis. In S. cerevisiae this complex consists of Fal1p and Sgd1p and in humans this complex consists of NOM1 and eIF4AIII subunits.","definition_xrefs":["PMID:21576267","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FAL1-SGD1 complex","termid":"GO:0097078"}


id: MONDO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the vagina. It includes low grade endometrioid stromal sarcoma and undifferentiated sarcoma.","definition_xrefs":["NCIT:C40269"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms","termid":"MONDO:0037742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms of the vagina","secondary_identifiers":["UMLS:C4289585","MEDGEN:927117","DOID:5171"],"synonyms":[{"name":"endometrioid stromal and related neoplasms of the vagina","type":"exact"},{"name":"endometrioid stromal and related neoplasms of vagina","type":"exact"},{"name":"endometrioid stromal and related tumors of the vagina","type":"exact"},{"name":"endometrioid stromal and related tumours of the vagina","type":"exact"},{"name":"vagina endometrioid stromal and related neoplasms","type":"exact"},{"name":"vaginal endometrial stromal tumor","type":"related"},{"name":"vaginal endometrial stromal tumour","type":"related"}],"termid":"MONDO:0003314","xrefs":{"Monarch":{"xref_id":"0003314"}}}


id: PBO:0085700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in ribosome biogenesis; forms a nucleolar complex with Mak21p that binds to 90S and 66S pre-ribosomes; forms a nuclear complex with Noc3p that binds to 66S pre-ribosomes; both complexes mediate intranuclear transport of ribosomal precursors; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit","termid":"PBO:0085700"}


id: GO:0036096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule that contributes to forming the mature 3' end of a miRNA from a pre-miRNA.","definition_xrefs":["PMID:22055292","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete 3'-5'-exoribonuclease activity involved in pre-miRNA 3'-end processing (obsolete GO:0036096)","synonyms":[{"name":"3'-5'-exoribonuclease activity involved in pre-miRNA 3'-end processing","type":"exact"},{"name":"exonucleolytic trimming to generate 3' end of miRNA from pre-miRNA","type":"related"}],"termid":"GO:0036096"}


id: MONDO:0009141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary dystonia DYT2 type is characterized by segmental dystonia that manifests with involuntary posturing affecting predominantly the feet.","definition_xrefs":["Orphanet:99657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 2","secondary_identifiers":["MEDGEN:346511","GARD:2028","NANDO:1200513","NCIT:C123415","OMIM:224500","DOID:0090038","MESH:C538006","UMLS:C1857093"],"synonyms":[{"name":"DYT2","type":"exact"},{"name":"HPCA dystonic disorder","type":"exact"},{"name":"autosomal recessive torsion dystonia 2","type":"exact"},{"name":"dystonia 2, torsion, autosomal recessive","type":"related"},{"name":"dystonia musculorum deformans 2","type":"related"},{"name":"dystonia musculorum deformans type 2","type":"related"},{"name":"dystonic disorder caused by mutation in HPCA","type":"exact"},{"name":"primary dystonia, DYT2 type","type":"related"},{"name":"torsion dystonia 2, autosomal recessive type","type":"related"},{"name":"torsion dystonia type 2","type":"exact"}],"termid":"MONDO:0009141","xrefs":{"Monarch":{"xref_id":"0009141"}}}


id: PBO:0076971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 2","termid":"PBO:0076971"}


id: PATO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000353 secondary product composition value (obsolete PATO:0000353)","termid":"PATO:0000353"}


id: PBO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 3","termid":"PBO:0040015"}


id: GO:2000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:2000718"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000719"}


id: PBO:0075759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 1","termid":"PBO:0075759"}


id: GO:0009438
data:
  {"annotated_genes":["SJAG_02106","SJAG_04404","SJAG_02960","SJAG_02988","SJAG_01596","SJAG_04674","SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73291,61048,74834,103111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[61047,59285,105372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylglyoxal metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"methylglyoxal bypass","type":"narrow"},{"name":"methylglyoxal metabolism","type":"exact"},{"name":"methylglyoxal pathway","type":"narrow"}],"termid":"GO:0009438","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: PBO:0073127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1","termid":"PBO:0073127"}


id: GO:0052805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of imidazoles, five-membered organic heterocycle containing two nitrogen atoms at positions 1 and 3, or any of its derivatives; compounds containing an imidazole skeleton.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imidazole-containing compound catabolic process","synonyms":[{"name":"imidazole breakdown","type":"exact"},{"name":"imidazole catabolism","type":"exact"},{"name":"imidazole degradation","type":"exact"}],"termid":"GO:0052805"}


id: PBO:0108837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase activating complex subunit Npr3","termid":"PBO:0108837"}


id: PBO:0046107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E","termid":"PBO:0046107"}


id: GO:0097091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in grouping synaptic vesicles in presynaptic structures.","definition_xrefs":["GOC:ans","GOC:pr","PMID:7568108","PMID:19900895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle localization","termid":"GO:0097479"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle clustering","termid":"GO:0097091"}


id: PBO:0061873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP antisense RNA 1","termid":"PBO:0061873"}


id: PBO:0039548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 antisense RNA 1","termid":"PBO:0039548"}


id: PBO:0072948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 28","termid":"PBO:0072948"}


id: MONDO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of insulitis which is an inflammation of the islets of Langerhans of the pancreas. The pancreas and in some cases the Pancreatic β-cells become infiltrated by polymorphonuclear leukocytes and infiltrated by mononuclear cells, leading to inflammation.","definition_xrefs":["EFO:0002502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"benign insulitis","secondary_identifiers":["PMID:20545565","Wikipedia:Insulitis"],"termid":"MONDO:0005176","xrefs":{"Monarch":{"xref_id":"0005176"}}}


id: PBO:0070641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 12","termid":"PBO:0070641"}


id: PBO:0091882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase Pan5","termid":"PBO:0091882"}


id: GO:2001120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methanofuran.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanofuran biosynthetic process","synonyms":[{"name":"methanofuran biosynthesis","type":"exact"}],"termid":"GO:2001120"}


id: GO:0038006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to contribute to the directed movement of a motile cell towards a higher concentration of netrin.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"netrin receptor activity","termid":"GO:0005042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"netrin receptor activity involved in chemoattraction","synonyms":[{"name":"attractive netrin receptor activity","type":"exact"},{"name":"netrin receptor activity involved in positive chemotaxis","type":"exact"}],"termid":"GO:0038006"}


id: PBO:0040576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B9 domain containing 1","termid":"PBO:0040576"}


id: FYPO:0005896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"decreased protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005896"}


id: PBO:0071822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 17","termid":"PBO:0071822"}


id: GO:0006283
data:
  {"annotated_genes":["SJAG_04540","SJAG_00119","SJAG_04778","SJAG_01480","SJAG_04353","SJAG_03454","SJAG_00329","SJAG_01540","SJAG_03206","SJAG_02116","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70400,72141,79329,88517,88702,90598,91209,91501,92315,97064,109692],"is_not":false,"summary":null,"term":"GO:0006283"}]},"cv_name":"biological_process","definition":"The nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["PMID:10197977","PMID:11900249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00329":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_02116":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_04114":null,"SJAG_04353":null,"SJAG_04540":null,"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6781827"],"synonyms":[{"name":"TC-NER","type":"exact"},{"name":"TCR","type":"related"},{"name":"transcription-coupled NER","type":"exact"},{"name":"transcription-coupled repair","type":"exact"}],"termid":"GO:0006283","terms_by_termid":{"GO:0006283":null}}


id: GO:0097001
data:
  {"annotated_genes":["SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117817],"is_not":false,"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ceramide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097001","terms_by_termid":{"GO:0097001":null}}


id: PBO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-4","termid":"PBO:0052882"}


id: GO:0032115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol + NADP+ = L-sorbose + H+ + NADPH. The reaction may occur, to a minor extent, in the reverse direction.","definition_xrefs":["EC:1.1.1.289","RHEA:14609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sorbose reductase activity","secondary_identifiers":["MetaCyc:1.1.1.289-RXN","KEGG_REACTION:R07346"],"synonyms":[{"name":"D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"Sou1p","type":"related"}],"termid":"GO:0032115"}


id: PBO:0068939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 182, pseudogene","termid":"PBO:0068939"}


id: MONDO:0004629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"substance-induced psychosis","termid":"MONDO:0004630"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"delirium","termid":"MONDO:0045057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"subacute delirium","secondary_identifiers":["ICD9:293.1","UMLS:C0154333","DOID:8645","SCTID:191507002","MEDGEN:56340"],"termid":"MONDO:0004629","xrefs":{"Monarch":{"xref_id":"0004629"}}}


id: GO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}


id: GO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a filamin, any member of a family of high molecular mass cytoskeletal proteins that crosslink actin filaments to form networks and stress fibers. Filamins contain an amino-terminal alpha-actinin-like actin binding domain, which is followed by a rod-domain composed of 4 to 24 100-residue repetitive segments including a carboxy-terminal dimerization domain.","definition_xrefs":["GOC:mah","PMID:11336782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"filamin binding","secondary_identifiers":["GO:0031006","GO:0031007","GO:0031008"],"synonyms":[{"name":"ABP-278/276 binding","type":"narrow"},{"name":"ABP-280 binding","type":"narrow"},{"name":"ABPL binding","type":"narrow"},{"name":"alpha-filamin binding","type":"narrow"},{"name":"beta-filamin binding","type":"narrow"},{"name":"filamin A binding","type":"narrow"},{"name":"filamin B binding","type":"narrow"},{"name":"filamin C binding","type":"exact"},{"name":"filamin-1 binding","type":"narrow"},{"name":"filamin-2 binding","type":"narrow"},{"name":"filamin-3 binding","type":"narrow"},{"name":"filamin-A binding","type":"narrow"},{"name":"filamin-B binding","type":"exact"},{"name":"filamin-C binding","type":"narrow"},{"name":"gamma-filamin binding","type":"narrow"}],"termid":"GO:0031005"}


id: MONDO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired ability to recognize other human faces in the absence of a vision disorder. It may be a congenital disorder or the result of brain injury.","definition_xrefs":["NCIT:C85031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prosopagnosia","secondary_identifiers":["UMLS:C0234512","DOID:4970","icd11.foundation:858616900","MEDGEN:65884","HP:0010528","MESH:D020238"],"synonyms":[{"name":"face blindness","type":"exact"},{"name":"prosopagnosia","type":"exact"},{"name":"prosopagnosia (disease)","type":"exact"}],"termid":"MONDO:0003227","xrefs":{"Monarch":{"xref_id":"0003227"}}}


id: PBO:0055162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2582","termid":"PBO:0055162"}


id: PR:Q10338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C582.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.04c","synonyms":[{"name":"Spom972h-dsh1","type":"exact"}],"termid":"PR:Q10338"}


id: GO:0008983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein L-glutamate = S-adenosyl-L-homocysteine + protein L-glutamate 5-methyl ester; this reaction is the methylation of peptidyl-L-glutamate to form peptidyl-L-glutamate 5-methyl ester.","definition_xrefs":["EC:2.1.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0140096","GO:0008276","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-glutamate O-methyltransferase activity","secondary_identifiers":["RHEA:24452","MetaCyc:CHER-RXN","RESID:AA0072"],"synonyms":[{"name":"MCP methyltransferase I","type":"related"},{"name":"MCP methyltransferase II","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-glutamate O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-glutamyl methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:protein-carboxyl O-methyltransferase activity","type":"related"},{"name":"methyl-accepting chemotaxis protein O-methyltransferase activity","type":"narrow"},{"name":"methyl-accepting chemotaxis protein methyltransferase II","type":"related"},{"name":"protein O-methyltransferase activity","type":"related"},{"name":"protein carboxyl-O-methyltransferase activity","type":"related"},{"name":"protein carboxyl-methylase activity","type":"related"},{"name":"protein carboxylmethyltransferase II","type":"related"},{"name":"protein carboxymethylase activity","type":"related"},{"name":"protein carboxymethyltransferase activity","type":"related"},{"name":"protein glutamate O-methylase activity","type":"exact"},{"name":"protein glutamate O-methyltransferase activity","type":"exact"},{"name":"protein methylase II","type":"related"},{"name":"protein(aspartate)methyltransferase activity","type":"related"},{"name":"protein(carboxyl)methyltransferase activity","type":"related"}],"termid":"GO:0008983"}


id: PR:P28040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase alpha catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10322:SF3","OMA:SCHPO01433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.06c","secondary_identifiers":["UniProtKB:P28040"],"synonyms":[{"name":"DNA polymerase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLA1","type":"exact"}],"termid":"PR:P28040"}


id: FYPO:0006036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more monomeric ribosomes (80S monosomes) in the cytosol than normal.","definition_xrefs":["PomBase:mah","PMID:10462529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at increased level","type":"exact"},{"name":"increased cytosolic 80S monosome level","type":"exact"},{"name":"increased cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"increased cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"increased cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"increased cytosolic ribosome level","type":"broad"},{"name":"increased level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006036"}


id: PBO:0062986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 1","termid":"PBO:0062986"}


id: GO:0005960
data:
  {"annotated_genes":["SJAG_03861","SJAG_02901","SJAG_03290","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57727,74554,78322,87764],"is_not":false,"summary":null,"term":"GO:0005960"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glycine cleavage complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005961","GO:0070015","Wikipedia:Glycine_decarboxylase_complex"],"synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine decarboxylase complex","type":"exact"},{"name":"glycine dehydrogenase (decarboxylating) complex","type":"exact"},{"name":"glycine dehydrogenase complex (decarboxylating)","type":"related"},{"name":"glycine synthase complex","type":"exact"}],"termid":"GO:0005960","terms_by_termid":{"GO:0005960":null}}


id: PBO:0048376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1B","termid":"PBO:0048376"}


id: PBO:0054791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2204","termid":"PBO:0054791"}


id: GO:0097448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A configuration of neuron spines found on ciliary ganglion neurons in the embryonic and adult brain consisting of patches of closely spaced spines lying flat against the soma.","definition_xrefs":["NIF_Subcellular:sao2128156969","PMID:10818137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine mat","termid":"GO:0097448"}


id: PR:O14095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin domain-containing protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21148:SF11","PRO:DNx","OMA:SCHPO01642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein plp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.12c","secondary_identifiers":["UniProtKB:O14095"],"synonyms":[{"name":"Spom972h-TXNDC9","type":"exact"},{"name":"phosducin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14095"}


id: GO:0036175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + glutaredoxin disulfide + H2O -> ribonucleoside diphosphate + glutaredoxin.","definition_xrefs":["GOC:bf","GOC:pde","PMID:19176520","PMID:7476363","PMID:31266802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity","termid":"GO:0061731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase activity, glutaredoxin disulfide as acceptor","secondary_identifiers":["Reactome:R-HSA-111742","Reactome:R-HSA-8866405"],"termid":"GO:0036175"}


id: PBO:0112978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase involved in error-free bypass of DNA lesions; binds flap DNA, stimulates activity of Rad27p and Dna2p; prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage; homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks; member of SF2 DExD/H superfamily of helicases; nonsense or missense mutations in FANCM predispose  individuals to breast cancer","termid":"PBO:0112978"}


id: PBO:0064378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS2 C-terminal like pseudogene","termid":"PBO:0064378"}


id: GO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The autocatalytic formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; known to occur in the capsid of some bacteriophage, such as HK97, where it is thought to provide a mechanism for stabilizing the capsid.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete protein catenane formation via N6-(L-isoaspartyl)-L-lysine, autocatalytic (obsolete GO:0019937)","termid":"GO:0019937"}


id: PBO:0047521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free fatty acid receptor 1","termid":"PBO:0047521"}


id: PBO:0054194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1569","termid":"PBO:0054194"}


id: MONDO:0024360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central sleep apnea syndrome","termid":"MONDO:0004731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central sleep apnea caused by high altitude","secondary_identifiers":["UMLS:C4075997","MEDGEN:884045","SCTID:91441000119109"],"synonyms":[{"name":"central sleep apnea caused by high altitude","type":"exact"},{"name":"central sleep apnea due to high altitude","type":"related"}],"termid":"MONDO:0024360","xrefs":{"Monarch":{"xref_id":"0024360"}}}


id: PBO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial PAS domain protein 1","termid":"PBO:0046392"}


id: PBO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase","termid":"PBO:0050074"}


id: FYPO:0007112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process in which depolymerization (i.e. removal of tubulin dimers) of microtubules occurs at a lower rate, or speed, as part of centromere clustering during meiotic prophase I.","definition_xrefs":["PomBase:mah","PMID:23770679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"decreased microtubule depolymerisation involved in meitotic centromere clustering during meiotic prophase I","termid":"FYPO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"decreased microtubule depolymerisation speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule depolymerization speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerisation involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic chromosome clustering during meiotic prophase I","type":"related"},{"name":"decreased rate of microtubule depolymerization involved in meiotic kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"reduced rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007112"}


id: PBO:0066731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 28","termid":"PBO:0066731"}


id: MONDO:0015658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral diseases of vascular origin with epilepsy (obsolete MONDO:0015658)","secondary_identifiers":["Orphanet:166487"],"termid":"MONDO:0015658","xrefs":{"Monarch":{"xref_id":"0015658"}}}


id: GO:1990195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial transmembrane transporter complex that spans the entire cell membrane system and possesses ATP-dependent xenobiotic transport activity pumping drugs (typically antibiotics) and other toxins directly from the cytosol out of the bacterial cell. Typically, it is trimeric consisting of a inner membrane ATPase (IMP), a periplasmic membrane fusion protein (MFP) and an outer membrane factor (OMF). In E. coli, macrolide transporter complexes may consists of MacB (IMP), MacA (MFP) and TolC (OMF) or AcrB (IMP), AcrA (MFP) and TolC (OMF). Trimeric TolC is a common OMF found in many macrolide transporter complexes.","definition_xrefs":["PMID:10879525","GOC:bhm","PMID:18955484","PMID:19254725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"macrolide transmembrane transporter complex","synonyms":[{"name":"AcrAB-TolC complex","type":"narrow"},{"name":"MacAB-TolC complex","type":"narrow"},{"name":"macrolide transporter","type":"related"},{"name":"macrolide transporter complex","type":"broad"}],"termid":"GO:1990195"}


id: PBO:0062580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 4","termid":"PBO:0062580"}


id: MONDO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Duane retraction syndrome (obsolete MONDO:0001550)","termid":"MONDO:0001550","xrefs":{"Monarch":{"xref_id":"0001550"}}}


id: GO:0007007
data:
  {"annotated_genes":["SJAG_04208","SJAG_00687","SJAG_02002","SJAG_01120","SJAG_01405","SJAG_03633","SJAG_01917","SJAG_02028","SJAG_02524","SJAG_01640","SJAG_05302","SJAG_05300","SJAG_02656","SJAG_04996","SJAG_02398","SJAG_03515","SJAG_05241","SJAG_04237","SJAG_00404","SJAG_03502","SJAG_01949","SJAG_03282","SJAG_02501","SJAG_04965","SJAG_06468"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75727,92824],"is_not":false,"summary":null,"term":"GO:0007007"},{"annotations":[107634,102022,79240,78873,75438,89835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[105228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[75974,103240,107883,74347,73839,90730,88998,113503,107905,116569,78226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[78646,78856,58340,78905,74792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial inner membrane.","definition_xrefs":["GOC:jl","GOC:ai","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01640":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_03282":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03633":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"inner mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"inner mitochondrial membrane organisation","type":"exact"},{"name":"inner mitochondrial membrane organization and biogenesis","type":"related"},{"name":"mitochondrial inner membrane organization","type":"exact"}],"termid":"GO:0007007","terms_by_termid":{"GO:0007007":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:1990627":null}}


id: PBO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF9","termid":"PBO:0017715"}


id: PBO:0050713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA (Hsp70) binding protein 1","termid":"PBO:0050713"}


id: PBO:0073030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 3","termid":"PBO:0073030"}


id: MONDO:0008484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stapes ankylosis with broad thumbs and toes is a very rare genetic bone disorder characterized by ankylosis of stapes, broad thumbs and halluces, conductive hearing loss and hyperopia.","definition_xrefs":["Orphanet:140917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NOG-related symphalangism spectrum disorder","termid":"MONDO:0100521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"stapes ankylosis with broad thumbs and toes","secondary_identifiers":["MEDGEN:357104","OMIM:184460","icd11.foundation:387089262","GARD:12631","SCTID:719305006","UMLS:C1866656"],"synonyms":[{"name":"Teunissen-Cremers syndrome","type":"exact"},{"name":"ankylosis of stapes, hyperopia, Broad thumbs, Broad first toes, and syndactyly","type":"related"},{"name":"stapes ankylosis syndrome without symphalangism","type":"related"},{"name":"stapes ankylosis with BROAD thumb and toes","type":"related"}],"termid":"MONDO:0008484","xrefs":{"Monarch":{"xref_id":"0008484"}}}


id: PBO:0091223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, poly(A)-bearing","termid":"PBO:0091223"}


id: MOD:01237
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal.","definition_xrefs":["Unimod:53#C","PubMed:15133838","PubMed:9629898","PubMed:11327326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01237"}


id: PBO:0054863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2277","termid":"PBO:0054863"}


id: FYPO:0004511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long cytoplasmic microtubules","termid":"FYPO:0000233"},{"relation_name":"is_a","term_name":"curved interphase microtubules","termid":"FYPO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"long curved interphase microtubules","synonyms":[{"name":"elongated curved interphase microtubules","type":"exact"},{"name":"long curved cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"long curved interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004511"}


id: MOD:01275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-lysine residue.","definition_xrefs":["PubMed:8597590","Unimod:276#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-[4-(2-aminoethyl)benzenesulfonyl]lysine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01275"}


id: PBO:0079181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 10","termid":"PBO:0079181"}


id: GO:2000681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transport.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transport (obsolete GO:2000681)","synonyms":[{"name":"negative regulation of Rb+ transport","type":"exact"},{"name":"negative regulation of rubidium cation transport","type":"exact"}],"termid":"GO:2000681"}


id: PBO:0077367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 106C","termid":"PBO:0077367"}


id: PBO:0076917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 epsilon","termid":"PBO:0076917"}


id: GO:0070321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating deprivation of nitrogen.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of translation in response to nitrogen starvation (obsolete GO:0070321)","termid":"GO:0070321"}


id: PATO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolality","synonyms":[{"name":"low osmolality","type":"exact"}],"termid":"PATO:0002028"}


id: GO:1903228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthosine.","definition_xrefs":["GOC:TermGenie","PMID:7559336","PMID:7007809","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"},{"relation_name":"is_a","term_name":"xanthosine metabolic process","termid":"GO:1903227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xanthosine catabolic process","synonyms":[{"name":"xanthosine breakdown","type":"exact"},{"name":"xanthosine catabolism","type":"exact"},{"name":"xanthosine degradation","type":"exact"}],"termid":"GO:1903228"}


id: PBO:0068187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 494","termid":"PBO:0068187"}


id: GO:0140855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 57) + ATP = histone H3-phosphoserine (position 57) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 57 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0004672","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3S57 kinase activity","synonyms":[{"name":"histone kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S57 specific)","type":"exact"}],"termid":"GO:0140855"}


id: PBO:0047818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 pseudogene 2","termid":"PBO:0047818"}


id: PBO:0004530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase (predicted)","termid":"PBO:0004530"}


id: PBO:0071612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 30","termid":"PBO:0071612"}


id: PBO:0050169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 25","termid":"PBO:0050169"}


id: PBO:0108910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFF interacting protein","termid":"PBO:0108910"}


id: GO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern.","definition_xrefs":["ISBN:0879694238","PMID:9550716","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Nebenkern assembly","synonyms":[{"name":"Nebenkern formation","type":"related"}],"termid":"GO:0007287"}


id: PBO:0045552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 5 pseudogene 1","termid":"PBO:0045552"}


id: GO:2001163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001163)","termid":"GO:2001163"}


id: GO:0015347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of organic anions from one side of a membrane to the other, in a sodium independent manner.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium-independent organic anion transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-879562","Reactome:R-HSA-9661723","Reactome:R-HSA-879594","Reactome:R-HSA-879584","Reactome:R-HSA-9661397","Reactome:R-HSA-9661446","Reactome:R-HSA-9661799","Reactome:R-HSA-9749583","Reactome:R-HSA-9757010","Reactome:R-HSA-9749607","Reactome:R-HSA-561059"],"termid":"GO:0015347"}


id: MONDO:1012506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative encephalopathy, non-human animal","termid":"MONDO:1011894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative encephalopathy, dog","secondary_identifiers":["OMIA:002055-9615"],"termid":"MONDO:1012506","xrefs":{"Monarch":{"xref_id":"1012506"}}}


id: MONDO:0011717
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87175],"is_not":false,"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","definition":"Hyperinsulinism-hyperammonemia syndrome (HIHA) is a frequent form of diazoxide-sensitive diffuse hyperinsulinism, characterized by an excessive/ uncontrolled insulin secretion (inappropriate for the level of glycemia), asymptomatic hyperammonemia and recurrent episodes of profound hypoglycemia induced by fasting and protein rich meals, requiring rapid and intensive treatment to prevent neurological sequelae. Epilepsy and cognitive deficit that are unrelated to hypoglycemia may also occur.","definition_xrefs":["Orphanet:35878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0004736","MONDO:0004335"],"is_obsolete":false,"name":"hyperinsulinism-hyperammonemia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1847555","MESH:C538375","GARD:9931","DOID:0070217","MEDGEN:376153","OMIM:606762","NCIT:C131832"],"synonyms":[{"name":"GDH hyperinsulinism","type":"exact"},{"name":"GLUD1 hyperinsulinism","type":"exact"},{"name":"HA/hi syndrome","type":"related"},{"name":"HHF6","type":"related"},{"name":"glutamate dehydrogenase 1 hyperinsulinism","type":"exact"},{"name":"hi/HA syndrome","type":"exact"},{"name":"hyperinsulinemic hypoglycemia familial 6","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 6","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, type 6","type":"exact"},{"name":"hyperinsulinism hyperammonemia syndrome","type":"related"},{"name":"hyperinsulinism-hyperammonemia syndrome","type":"exact"},{"name":"hyperinsulinism/hyperammonemia syndrome","type":"exact"}],"termid":"MONDO:0011717","terms_by_termid":{"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0011717"}}}


id: FYPO:0004696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more fatty acids (usually supplied as the corresponding anions). Cells stop growing (and may die) at a concentration of fatty acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:12963726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to fatty acid","synonyms":[{"name":"hypersensitive to fatty acid","type":"exact"},{"name":"sensitive to fatty acid anion","type":"exact"},{"name":"sensitive to fatty acid during mitotic cell cycle","type":"related"},{"name":"sensitive to fatty acid during vegetative growth","type":"exact"},{"name":"sensitive to free fatty acids","type":"exact"}],"termid":"FYPO:0004696"}


id: PBO:0054367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1761","termid":"PBO:0054367"}


id: PBO:0072509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 38","termid":"PBO:0072509"}


id: MONDO:0016949
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Chromosome 16p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 16. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 16p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 16","termid":"MONDO:0016934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5315","UMLS:C0795861","icd11.foundation:325064766","MEDGEN:208643","Orphanet:262794"],"synonyms":[{"name":"16p duplication","type":"related"},{"name":"16p trisomy","type":"related"},{"name":"Duplication 16p","type":"related"},{"name":"chromosome 16p duplication","type":"related"},{"name":"partial duplication of chromosome 16p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 16","type":"exact"},{"name":"partial trisomy 16p","type":"related"},{"name":"partial trisomy of chromosome 16p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 16","type":"exact"},{"name":"trisomy 16p","type":"related"}],"termid":"MONDO:0016949","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0016949"}}}


id: PATO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000229 olfactory (obsolete PATO:0000229)","termid":"PATO:0000229"}


id: MONDO:0700076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple acyl-CoA dehydrogenase deficiency in which the cause of the disease is a mutation in the ETFDH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002525","MONDO:0005066","MONDO:0005267"],"is_obsolete":false,"name":"glutaric acidemia IIc","secondary_identifiers":["UMLS:C3278156","MEDGEN:479786"],"synonyms":[{"name":"ETFDH deficiency","type":"exact"},{"name":"GA2C","type":"exact"},{"name":"glutaric acidemia 2C","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency caused by mutation in ETFDH","type":"exact"}],"termid":"MONDO:0700076","xrefs":{"Monarch":{"xref_id":"0700076"}}}


id: GO:0140364
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm and the nucleus. GW-bodies minimally contain the Argonaute2 (Ago2) and TNRC6B proteins, together with specific target RNAs.","definition_xrefs":["PMID:26930655","PMID:29576456","PMID:16418578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"GW body","synonyms":[{"name":"GW-body","type":"exact"}],"termid":"GO:0140364"}


id: GO:0050139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = N-(beta-D-glucosyl)nicotinate + UDP.","definition_xrefs":["RHEA:19437","EC:2.4.1.196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nicotinate-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:NICOTINATE-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R01722"],"synonyms":[{"name":"UDP-glucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:nicotinic acid-N-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"nicotinate glucosyltransferase activity","type":"broad"},{"name":"uridine diphosphoglucose-nicotinate N-glucosyltransferase activity","type":"related"}],"termid":"GO:0050139"}


id: GO:0008812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + choline = AH(2) + betaine aldehyde.","definition_xrefs":["RHEA:17433","EC:1.1.99.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"choline dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-6797961","MetaCyc:CHD-RXN","KEGG_REACTION:R01025"],"synonyms":[{"name":"choline oxidase activity","type":"broad"},{"name":"choline-cytochrome c reductase activity","type":"related"},{"name":"choline:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"choline:(acceptor) oxidoreductase activity","type":"related"},{"name":"choline:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0008812"}


id: GO:0016718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for oxidoreductases, acting on paired donors with incorporation or reduction of molecular oxygen, that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, miscellaneous (obsolete GO:0016718)","synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, miscellaneous","type":"exact"}],"termid":"GO:0016718"}


id: GO:0008519
data:
  {"annotated_genes":["SJAG_04731","SJAG_04136"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70188,75729],"is_not":false,"summary":null,"term":"GO:0008519"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of ammonium through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:17710640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ammonium channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-444419","MetaCyc:RXN-9615","GO:0015251","Reactome:R-HSA-446277","Reactome:R-HSA-446278","Reactome:R-HSA-5623051","Reactome:R-HSA-444416","TC:1.A.11","GO:0051739","Reactome:R-HSA-444393"],"synonyms":[{"name":"ammonia transmembrane transporter activity","type":"broad"},{"name":"ammonium transmembrane transporter activity","type":"broad"}],"termid":"GO:0008519","terms_by_termid":{"GO:0008519":null}}


id: PBO:0040299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2B2 intronic transcript 1","termid":"PBO:0040299"}


id: MONDO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving goat milk.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete goat milk allergy (obsolete MONDO:0000797)","secondary_identifiers":["DOID:0060522"],"synonyms":[{"name":"Capra hircus milk allergy","type":"exact"},{"name":"allergy of goat dairy food product","type":"exact"},{"name":"goat dairy food product allergic disease","type":"exact"}],"termid":"MONDO:0000797","xrefs":{"Monarch":{"xref_id":"0000797"}}}


id: FYPO:0003112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitinyl hydrolase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ubiquitinyl hydrolase activity","termid":"FYPO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased ubiquitinyl hydrolase activity","termid":"FYPO:0003112"}


id: GO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"polymyxin transmembrane transporter activity","synonyms":[{"name":"polymyxin transporter activity","type":"related"}],"termid":"GO:0042897"}


id: GO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"regulates","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hypersensitivity","termid":"GO:0002883"}


id: PBO:0085196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orotidine-5'-phosphate (OMP) decarboxylase; catalyzes the sixth enzymatic step in the de novo biosynthesis of pyrimidines, converting OMP into uridine monophosphate (UMP); converts 5-FOA into 5-fluorouracil, a toxic compound","termid":"PBO:0085196"}


id: GO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the cell outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of cell outer membrane","synonyms":[{"name":"extrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031244"}


id: GO:0021807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of soluble factors and receptors that result in the movement of cells in the primitive cerebral cortex.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"},{"relation_name":"part_of","term_name":"initiation of movement involved in cerebral cortex radial glia guided migration","termid":"GO:0021806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"motogenic signaling initiating cell movement in cerebral cortex","synonyms":[{"name":"motogenic signalling initiating cell movement in the cerebral cortex","type":"exact"}],"termid":"GO:0021807"}


id: GO:0042656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the phosphorylation and activation of JUN kinase kinase kinases (JNKKKs).","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase kinase kinase activity","termid":"GO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0004672","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"JUN kinase kinase kinase kinase activity","synonyms":[{"name":"JUNKKKK activity","type":"exact"}],"termid":"GO:0042656"}


id: PR:O74331
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rlp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rlp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.11","synonyms":[{"name":"RecA-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rlp1","type":"exact"}],"termid":"PR:O74331"}


id: PBO:0039783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 10","termid":"PBO:0039783"}


id: GO:0045715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045715)","synonyms":[{"name":"down regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"inhibition of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"negative regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045715"}


id: PBO:0045733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL associated factor 2","termid":"PBO:0045733"}


id: GO:0006290
data:
  {"annotated_genes":["SJAG_03613","SJAG_01262","SJAG_00500"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106267],"is_not":false,"summary":null,"term":"GO:0006290"},{"annotations":[116993,116992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000720"}]},"cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_01262":null,"SJAG_03613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"pyrimidine dimer repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006290","terms_by_termid":{"GO:0000720":null,"GO:0006290":null}}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88211,94169],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: PBO:0089154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Swd22","termid":"PBO:0089154"}


id: GO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a lymphocyte to an endothelial cell of a high endothelial venule (HEV) via adhesion molecules. A HEV cell is an endothelial cell that is cuboidal, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream.","definition_xrefs":["GOC:nhn","PMID:7679710","CL:0002652","Wikipedia:High_endothelial_venules","PMID:19339990","CL:0000542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"lymphocyte adhesion to endothelial cell of high endothelial venule","synonyms":[{"name":"lymphocyte adhesion to HEV cell","type":"exact"},{"name":"lymphocyte adhesion to high endothelial venule","type":"exact"}],"termid":"GO:0036339"}


id: PBO:0043907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRK like proto-oncogene, adaptor protein","termid":"PBO:0043907"}


id: FYPO:0000005
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119581,119666,119569],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119507],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[119642,119641,119590,119645],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0000648"},{"annotations":[119784,119816,119779,119790],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119644,119650,119643],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[119648,119649],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by altered cell morphology, i.e. the size, shape, or structure of the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02013":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":16,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D 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type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell morphology","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null},"secondary_identifiers":["FYPO:0000019"],"single_locus_annotated_genes":["SJAG_04280","SJAG_04703","SJAG_00514","SJAG_04522","SJAG_00266","SJAG_03581","SJAG_03048","SJAG_00028","SJAG_01794","SJAG_02819","SJAG_03453","SJAG_04312","SJAG_04332","SJAG_02013","SJAG_02592"],"single_locus_genotype_uniquenames":["pyp1delta","gef1delta","for3delta","scd1delta","rga6delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","rga4delta","sty1delta","ras1delta","atf1delta","efc25delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta"],"synonyms":[{"name":"cell morphology, misshapen cells","type":"related"},{"name":"cellular morphology: abnormal","type":"related"}],"termid":"FYPO:0000005","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0098767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis II.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis II M phase (obsolete GO:0098767)","termid":"GO:0098767"}


id: PBO:0088772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Iss1","termid":"PBO:0088772"}


id: GO:0008236
data:
  {"annotated_genes":["SJAG_03648","SJAG_00975","SJAG_04819","SJAG_04398","SJAG_00737","SJAG_04785","SJAG_03910","SJAG_04928","SJAG_05286","SJAG_03121","SJAG_01136","SJAG_03261","SJAG_01285","SJAG_00984","SJAG_01868","SJAG_02809","SJAG_03258","SJAG_02565","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57575],"is_not":false,"summary":null,"term":"GO:0008236"},{"annotations":[75886,76591,79829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[65631,76485,67475,74309,74741,79641,61918,69584,62026,75176,65985,75866,79919,77761,68343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[74386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"serine hydrolase activity","termid":"GO:0017171"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"serine-type peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6801766","Reactome:R-HSA-9839072","Reactome:R-HSA-9839110","Reactome:R-HSA-2022383","Reactome:R-HSA-1461993","Reactome:R-HSA-3132753"],"synonyms":[{"name":"serine protease activity","type":"narrow"}],"termid":"GO:0008236","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null}}


id: MONDO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune polyendocrine syndrome type 2 (obsolete MONDO:0000272)","termid":"MONDO:0000272","xrefs":{"Monarch":{"xref_id":"0000272"}}}


id: GO:0048674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in reformation of a growth cone by the tip of an injured axon, or in collateral sprouting of the axon. Collateral sprouting is the process in which outgrowths develop from the shafts of existing axons.","definition_xrefs":["GOC:dph","GOC:lm","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"},{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of injured axon","termid":"GO:0048674"}


id: MONDO:0005438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The spread of a malignant neoplasm to the lymph nodes.","definition_xrefs":["NCIT:C4904"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"lymph node cancer","termid":"MONDO:0001082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the lymph nodes","secondary_identifiers":["EFO:0004906","UMLS:C0686619","MEDGEN:151947"],"synonyms":[{"name":"Metastases to lymph nodes","type":"exact"},{"name":"metastasis to lymph node","type":"exact"},{"name":"metastatic malignant neoplasm to the lymph nodes","type":"exact"},{"name":"metastatic neoplasm to the lymph node","type":"exact"},{"name":"metastatic tumor to lymph node","type":"exact"},{"name":"metastatic tumour to lymph node","type":"exact"}],"termid":"MONDO:0005438","xrefs":{"Monarch":{"xref_id":"0005438"}}}


id: PBO:0013765
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vps38 was previously annotated as atg14","termid":"PBO:0013765"}


id: PBO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-chromosome Associated Protein","termid":"PBO:0016578"}


id: GO:0034362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle, rich in cholesterol esters and low in triglycerides that is typically composed of APOB100 and APOE and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm. LDL particles are formed from VLDL particles (via IDL) by the loss of triglyceride and gain of cholesterol ester. They transport endogenous cholesterol (and to some extent triglycerides) from peripheral tissues back to the liver.","definition_xrefs":["GOC:rl","GOC:mah","GOC:BHF","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"low-density lipoprotein particle","synonyms":[{"name":"LDL complex","type":"exact"},{"name":"LDL particle","type":"exact"},{"name":"low-density lipoprotein complex","type":"exact"}],"termid":"GO:0034362"}


id: PBO:0085390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane low glucose sensor, regulates glucose transport; high affinity sensor that contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; also senses fructose and mannose; SNF3 has a paralog, RGT2, that arose from the whole genome duplication","termid":"PBO:0085390"}


id: PR:O74939
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl2 gene.","definition_xrefs":["UniProtKB:O74939","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.01c","synonyms":[{"name":"Spom972h-dbl2","type":"exact"}],"termid":"PR:O74939"}


id: PBO:0067577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 734, pseudogene","termid":"PBO:0067577"}


id: PBO:0064305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholamban","termid":"PBO:0064305"}


id: GO:0047050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxystearate + NAD+ = 2-oxostearate + H+ + NADH.","definition_xrefs":["RHEA:11384","EC:1.1.1.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-2-hydroxy-fatty acid dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.99-RXN","KEGG_REACTION:R03022"],"synonyms":[{"name":"(S)-2-hydroxy-fatty-acid dehydrogenase activity","type":"exact"},{"name":"(S)-2-hydroxystearate:NAD+ oxidoreductase activity","type":"related"},{"name":"2-hydroxy fatty acid oxidase","type":"broad"},{"name":"L-2-hydroxy fatty acid dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-2-hydroxy fatty acid","type":"related"}],"termid":"GO:0047050"}


id: PBO:0040692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCDIN3 domain containing RNA methyltransferase","termid":"PBO:0040692"}


id: PBO:0108580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj4","termid":"PBO:0108580"}


id: FYPO:0001628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular valine level","termid":"FYPO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuolar valine level","synonyms":[{"name":"normal level of valine in vacuole","type":"exact"},{"name":"normal vacuolar L-valine level","type":"exact"},{"name":"normal vacuolar valine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar valine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001628"}


id: GO:0030656
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89378,113990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vitamin metabolism","type":"exact"}],"termid":"GO:0030656","terms_by_termid":{"GO:0090180":null}}


id: MONDO:0006765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus fusobacterium.","definition_xrefs":["MESH:D005674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fusobacteriaceae infectious disease","termid":"MONDO:0006925"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusobacterium infectious disease","secondary_identifiers":["EFO:1000943","SCTID:712657002","UMLS:C4039413","MEDGEN:872278","ICD9:041.84"],"synonyms":[{"name":"Fusobacterium caused disease or disorder","type":"exact"},{"name":"Fusobacterium disease or disorder","type":"exact"},{"name":"infection caused by Fusobacterium","type":"related"},{"name":"infection due to Fusobacterium","type":"exact"}],"termid":"MONDO:0006765","xrefs":{"Monarch":{"xref_id":"0006765"}}}


id: PBO:0075562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine kinase 1","termid":"PBO:0075562"}


id: PBO:0051300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-37 (non-functional)","termid":"PBO:0051300"}


id: PBO:0083128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-ribulose-5-phosphate 3-epimerase; catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress","termid":"PBO:0083128"}


id: MONDO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormality in lung development that is characterized by a multicystic mass resulting from an adenomatous overgrowth of the terminal bronchioles with a consequent reduction of pulmonary alveoli. This anomaly is classified into three types by the cyst size.","definition_xrefs":["MESH:D015615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation","secondary_identifiers":["icd11.foundation:2091138945","UMLS:C0010668","GARD:18772","SCTID:111318005","MEDGEN:8225","NCIT:C98892","Orphanet:2444"],"synonyms":[{"name":"CCAM","type":"exact"},{"name":"CPAM","type":"exact"},{"name":"congenital cystic adenomatoid malformation","type":"related"},{"name":"congenital cystic adenomatoid malformation of lung","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung","type":"exact"},{"name":"congenital cystic disease of the lung","type":"exact"},{"name":"cystic adenomatoid malformation of lung","type":"related"}],"termid":"MONDO:0016580","xrefs":{"Monarch":{"xref_id":"0016580"}}}


id: PBO:0065664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type N","termid":"PBO:0065664"}


id: MONDO:0800275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 14a","secondary_identifiers":["UMLS:C3552491","MEDGEN:765405"],"synonyms":[{"name":"AUTS14A","type":"exact"}],"termid":"MONDO:0800275","xrefs":{"Monarch":{"xref_id":"0800275"}}}


id: FYECO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with isoleucine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, isoleucine nitrogen source","termid":"FYECO:0000278"}


id: PBO:0062503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 3 pseudogene","termid":"PBO:0062503"}


id: GO:0046983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein dimerization activity","termid":"GO:0046983"}


id: PBO:0041370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4orf46 pseudogene 2","termid":"PBO:0041370"}


id: MONDO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myophosphorylase deficiency (McArdle's disease), or glycogen storage disease type 5 (GSD5), is a severe form of glycogen storage disease characterized by exercise intolerance.","definition_xrefs":["Orphanet:368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease V","secondary_identifiers":["UMLS:C0017924","MedDRA:10018462","MEDGEN:5341","NANDO:1200828","GARD:6528","DOID:2746","NANDO:2200541","NCIT:C84738","OMIM:232600","MESH:D006012","SCTID:55912009"],"synonyms":[{"name":"GSD 5","type":"related"},{"name":"GSD due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"GSD type 5","type":"exact"},{"name":"GSD type V","type":"exact"},{"name":"GSD5","type":"related"},{"name":"McArdle disease","type":"exact"},{"name":"McArdle type glycogen storage disease","type":"related"},{"name":"McArdle's disease","type":"exact"},{"name":"Mcardle disease","type":"exact"},{"name":"PYGM glycogen storage disease","type":"exact"},{"name":"Pygm deficiency","type":"related"},{"name":"glycogen storage disease 5","type":"related"},{"name":"glycogen storage disease V","type":"exact"},{"name":"glycogen storage disease caused by mutation in PYGM","type":"exact"},{"name":"glycogen storage disease due to muscle glycogen phosphorylase deficiency","type":"related"},{"name":"glycogen storage disease type 5","type":"exact"},{"name":"glycogen storage disease type V","type":"exact"},{"name":"glycogen storage disease, type V","type":"exact"},{"name":"glycogenosis due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"glycogenosis type 5","type":"exact"},{"name":"glycogenosis type V","type":"exact"},{"name":"muscle glycogen phosphorylase deficiency","type":"related"},{"name":"myophosphorylase deficiency","type":"exact"}],"termid":"MONDO:0009293","xrefs":{"Monarch":{"xref_id":"0009293"}}}


id: MOD:00167
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-asparaginyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["PubMed:1824714","PubMed:8276756","RESID:AA0158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00764","MOD:01155"],"is_obsolete":false,"name":"N-asparaginyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIAsn","type":"exact"},{"name":"LIPID GPI-anchor amidated asparagine","type":"exact"},{"name":"N-asparaginyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00167"}


id: MONDO:0019912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 6 is an uniparental disomy of maternal origin characterized by intrauterine growth retardation. Homozygosity for a recessive disease mutation for which only a mother is a carrier may lead to other phenotypes.","definition_xrefs":["Orphanet:96181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 6","secondary_identifiers":["UMLS:C4707720","icd11.foundation:423779048","SCTID:766239009","MEDGEN:1638411","GARD:19333"],"synonyms":[{"name":"UPD(6)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 6","type":"exact"}],"termid":"MONDO:0019912","xrefs":{"Monarch":{"xref_id":"0019912"}}}


id: PBO:0058137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4435-2 host gene","termid":"PBO:0058137"}


id: PBO:0084483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific component of the spindle pole body; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane (PSM) during meiosis II; required for PSM growth and closure; DON1 has a paralog, CUE5, that arose from the whole genome","termid":"PBO:0084483"}


id: GO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the semicircular canal from the otic vesicle. This process begins with the regionalization of the vesicle that specifies the area where the vesicles will form and continues through the process of fusion which forms the initial tubes.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"},{"relation_name":"part_of","term_name":"semicircular canal morphogenesis","termid":"GO:0048752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal formation","termid":"GO:0060876"}


id: GO:0102462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = quercetin 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-sophoroside 7-O-rhamnosyltransferase activity (obsolete GO:0102462)","termid":"GO:0102462"}


id: PBO:0084578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR075W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR074W","termid":"PBO:0084578"}


id: PBO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit, Spc105/KNL-1 family member, blinkin, Spc7","termid":"PBO:0018138"}


id: PBO:0079270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39C","termid":"PBO:0079270"}


id: GO:0030192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of chaperones of the Hsp70/Hsc70 class.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp70/Hsc70 protein regulator activity (obsolete GO:0030192)","synonyms":[{"name":"Hsp70/Hsc70 protein regulator activity","type":"exact"}],"termid":"GO:0030192"}


id: PBO:0080023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 9, pseudogene","termid":"PBO:0080023"}


id: MONDO:0018871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute leukemia characterized by the proliferation of both neutrophil and monocyte precursors. (WHO, 2001)","definition_xrefs":["NCIT:C7463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myelomonocytic leukemia M4","secondary_identifiers":["Orphanet:517","SCTID:110005000","ICDO:9867/3","MedDRA:10000890","UMLS:C0023479","DOID:0081082","EFO:0000223","GARD:529","MEDGEN:9732","icd11.foundation:1613358778","ONCOTREE:AMML"],"synonyms":[{"name":"AML M4","type":"exact"},{"name":"AML-M4","type":"related"},{"name":"AMML","type":"exact"},{"name":"AMMoL","type":"exact"},{"name":"acute M4 myeloid leukaemia","type":"exact"},{"name":"acute M4 myeloid leukemia","type":"exact"},{"name":"acute myeloblastic leukaemia type 4","type":"related"},{"name":"acute myeloblastic leukemia type 4","type":"related"},{"name":"acute myelomonocytic leukaemia","type":"exact"},{"name":"acute myelomonocytic leukaemia (FAB type M4)","type":"exact"},{"name":"acute myelomonocytic leukemia","type":"exact"},{"name":"acute myelomonocytic leukemia (FAB type M4)","type":"exact"}],"termid":"MONDO:0018871","xrefs":{"Monarch":{"xref_id":"0018871"}}}


id: PBO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK4 associating serine/arginine rich protein","termid":"PBO:0043219"}


id: PBO:0027982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus","termid":"PBO:0027982"}


id: PBO:0114427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLRAD4 antisense RNA 2","termid":"PBO:0114427"}


id: PBO:0087603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CCR4-NOT1 core complex; this complex has multiple roles in the regulation of mRNA levels including regulation of transcription and destabilization of mRNA by deadenylation; basal transcription factor that increases initiation and elongation; activates the ATPase activity of Dhh1p, resulting in processing body disassembly","termid":"PBO:0087603"}


id: GO:0060466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of meiosis in an egg after the egg has been fertilized or physiologically activated. Eggs generally arrest in meiosis and complete the process after activation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of meiosis","termid":"GO:0090427"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"activation of meiosis involved in egg activation","synonyms":[{"name":"reactivation of meiosis after fertilization","type":"narrow"},{"name":"resumption of meiosis involved in egg activation","type":"exact"}],"termid":"GO:0060466"}


id: GO:0090594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to wounding","termid":"GO:0090594"}


id: PBO:0088897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glycoside hydrolase, family 5","termid":"PBO:0088897"}


id: GO:1904048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22314364","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of spontaneous synaptic transmission","termid":"GO:0150003"},{"relation_name":"regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"regulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904048"}


id: PBO:0062740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 7 pseudogene","termid":"PBO:0062740"}


id: PR:O42706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.08","synonyms":[{"name":"Spom972h-rpl2102","type":"exact"}],"termid":"PR:O42706"}


id: PBO:0111867
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type","termid":"PBO:0111867"}


id: GO:0021707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dph","GOC:dgh","PMID:15157725","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell differentiation","termid":"GO:0021707"}


id: PBO:0079566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated and SH3 domain containing A","termid":"PBO:0079566"}


id: MONDO:0015992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive cone dystrophy (obsolete MONDO:0015992)","termid":"MONDO:0015992","xrefs":{"Monarch":{"xref_id":"0015992"}}}


id: MONDO:0013769
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87008],"is_not":false,"summary":null,"term":"MONDO:0013769"}]},"cv_name":"mondo","definition":"Any atrioventricular septal defect in which the cause of the disease is a mutation in the GATA6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"},{"relation_name":"is_a","term_name":"GATA6-related congenital heart disease with or without pancreatic agenesis or neonatal diabetes","termid":"MONDO:0100540"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrioventricular septal defect 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614474","MEDGEN:482569","UMLS:C3280939"],"synonyms":[{"name":"AVSD5","type":"related"},{"name":"GATA6 atrioventricular septal defect","type":"exact"},{"name":"atrioventricular septal defect 5","type":"exact"},{"name":"atrioventricular septal defect caused by mutation in GATA6","type":"exact"},{"name":"atrioventricular septal defect type 5","type":"exact"}],"termid":"MONDO:0013769","terms_by_termid":{"MONDO:0013769":null},"xrefs":{"Monarch":{"xref_id":"0013769"}}}


id: PBO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component alpha subunit Pda1 (predicted)","termid":"PBO:0002874"}


id: PBO:0038305
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_level","termid":"PBO:0038305"}


id: PBO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 3","termid":"PBO:0072377"}


id: MONDO:0021124
data:
  {"annotated_genes":["SJAG_03698","SJAG_00103","SJAG_02954","SJAG_04950","SJAG_02339","SJAG_03418","SJAG_04148","SJAG_00377","SJAG_02690","SJAG_04738","SJAG_04114","SJAG_02294","SJAG_03051","SJAG_03720","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[86362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86769,86768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[86064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[86465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[87360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86954,86953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"Diminished or absent ability of a female to achieve conception.","definition_xrefs":["MESH:D007247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"female infertility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0021361","SCTID:6738008","ICD9:628.9","ICD9:628.8","MEDGEN:5795","EFO:0008560","ICD10CM:N97","icd11.foundation:1237004558"],"synonyms":[{"name":"female infertility","type":"exact"},{"name":"female reproductive system infertility","type":"exact"},{"name":"female reproductive system infertility disorder","type":"exact"},{"name":"female sterility","type":"related"},{"name":"female sub-fertility","type":"related"},{"name":"female subfertility","type":"related"},{"name":"infertility disorder of female reproductive system","type":"exact"},{"name":"postpartum sterility","type":"related"},{"name":"sterility, female","type":"related"},{"name":"sterility, postpartum","type":"related"},{"name":"sub fertility, female","type":"related"},{"name":"sub-fertility, female","type":"related"},{"name":"subfertility, female","type":"related"}],"termid":"MONDO:0021124","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0021124"}}}


id: MONDO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The simple virilizing form of classical congenital adrenal hyperplasia due to 21-hydroxylase deficiency (classical 21 OHD CAH) is characterized by genital ambiguity and virilization of the external genitalia in females, hypocortisolism and precocious pseudopuberty without salt-wasting.","definition_xrefs":["Orphanet:315311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency","termid":"MONDO:0008728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency, simple virilizing form","secondary_identifiers":["GARD:21399","UMLS:C5679895","MEDGEN:1826061"],"synonyms":[{"name":"classic 21-OHD CAH, simple virilizing form","type":"exact"}],"termid":"MONDO:0017840","xrefs":{"Monarch":{"xref_id":"0017840"}}}


id: PBO:0108975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule associated protein 2","termid":"PBO:0108975"}


id: PBO:0036180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036180"}


id: PBO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 15","termid":"PBO:0046573"}


id: PR:P31318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg11 gene.","definition_xrefs":["UniProtKB:P31318","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arg11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.09c","synonyms":[{"name":"Spom972h-arg11","type":"exact"}],"termid":"PR:P31318"}


id: PBO:0068812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 49, pseudogene","termid":"PBO:0068812"}


id: MONDO:0008606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Say-Field-Coldwell syndrome is characterized by triphalangeal thumbs, brachydactyly, camptodactyly, recurrent dislocation of the patellas and relatively short stature. It has been described in a mother and her three daughters.","definition_xrefs":["Orphanet:3133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Say-field-Coldwell syndrome","secondary_identifiers":["OMIM:190650","UMLS:C1860805","MESH:C536619","GARD:242","MEDGEN:348711"],"synonyms":[{"name":"triphalangeal thumbs and dislocation of patella","type":"related"},{"name":"polydactyly with triphalangeal thumbs, brachydactyly, camptodactyly, congenital dislocation of the patellas, short stature and borderline intelligence","type":"related"},{"name":"triphalangeal thumbs-dislocation of patella syndrome","type":"exact"}],"termid":"MONDO:0008606","xrefs":{"Monarch":{"xref_id":"0008606"}}}


id: GO:0008605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of the enzyme protein kinase CK2.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase CK2 regulator activity (obsolete GO:0008605)","synonyms":[{"name":"casein kinase II, regulator","type":"exact"},{"name":"protein kinase CK2 regulator activity","type":"exact"},{"name":"protein kinase CK2, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008605"}


id: FYPO:0006473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of amino acid biosynthesis genes from RNA polymerase II promoters occurs to a lower extent than normal in response to starvation for one or more amino acids. Amino acid biosynthesis genes are those whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription of amino acid biosynthesis genes","termid":"FYPO:0006443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation","synonyms":[{"name":"decreased transcription of amino acid biosynthesis genes during cellular response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes from RNA pol II promoter in response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced transcription of amino acid biosynthesis genes in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006473"}


id: MONDO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This is usually an oligoclonal CD8+ lymphocytic infiltration of various organs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse infiltrative lymphocytosis syndrome","secondary_identifiers":["DOID:6677","MEDGEN:232428","SCTID:449784008","UMLS:C1333292","NCIT:C35699"],"synonyms":[{"name":"diffuse infiltra. lymph. sydrome","type":"exact"},{"name":"diffuse infiltra. lymph. syndrome","type":"exact"}],"termid":"MONDO:0003963","xrefs":{"Monarch":{"xref_id":"0003963"}}}


id: PATO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncrowded","termid":"PATO:0000633"}


id: GO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of norepinephrine secretion","termid":"GO:0010701"}


id: GO:0042817
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:jl","PMID:21767669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pyridoxal metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal metabolism","type":"exact"}],"termid":"GO:0042817","terms_by_termid":{"GO:0042821":null}}


id: MOD:01892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-crotonyl-L-lysine.","definition_xrefs":["PubMed:21925322","RESID:AA0567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-crotonyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(2E)-but-2-enamido]hexanoic acid","type":"exact"},{"name":"(2S)-2-amino-6-[(2E)-but-2-enoylamino]hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-[(2E)-but-2-enoylazanyl]hexanoic acid","type":"exact"},{"name":"MOD_RES N6-crotonyl-L-lysine","type":"exact"},{"name":"N(epsilon)-crotonyllysine","type":"exact"},{"name":"N6-(E)-crotonyllysine","type":"exact"},{"name":"N6-[(2E)-2-butenoyl]-L-lysine","type":"exact"},{"name":"N6-crotonyl-L-lysine","type":"exact"},{"name":"N6-crotonyllysine","type":"exact"},{"name":"N6-trans-crotonyllysine","type":"exact"}],"termid":"MOD:01892"}


id: PBO:0073875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 3","termid":"PBO:0073875"}


id: GO:1903074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TRAIL death-inducing signaling complex.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:21785459","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex assembly","termid":"GO:0071550"},{"relation_name":"part_of","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0023052","GO:0044085"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex assembly","synonyms":[{"name":"TRAIL DISC assembly","type":"exact"},{"name":"TRAIL DISC formation","type":"exact"},{"name":"TRAIL death-inducing signaling complex formation","type":"exact"},{"name":"TRAIL death-inducing signalling complex assembly","type":"exact"},{"name":"TRAIL death-inducing signalling complex formation","type":"exact"}],"termid":"GO:1903074"}


id: MONDO:0006058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal neoplasm characterized by the presence of epithelial, mesenchymal, and blastema components. The vast majority of cases arise from the kidney. A small number of cases with morphologic features resembling Wilms tumor of the kidney have been reported arising from the ovary and the cervix.","definition_xrefs":["NCIT:C3267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Wilms tumor","secondary_identifiers":["MESH:D009396","UMLS:C0027708","MEDGEN:10221"],"synonyms":[{"name":"Wilms tumor","type":"exact"},{"name":"Wilms tumor (nephroblastoma)","type":"narrow"},{"name":"Wilms tumour (nephroblastoma)","type":"narrow"},{"name":"Wilms' tumor","type":"exact"},{"name":"Wilms' tumour","type":"exact"}],"termid":"MONDO:0006058","xrefs":{"Monarch":{"xref_id":"0006058"}}}


id: GO:2000530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of insulin secretion involved in cellular response to glucose stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus (obsolete GO:2000530)","synonyms":[{"name":"positive regulation of regulation of insulin secretion in response to glucose","type":"exact"},{"name":"positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus","type":"exact"}],"termid":"GO:2000530"}


id: PR:O14344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inosine-5'-monophosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-5'-monophosphate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.14c","secondary_identifiers":["UniProtKB:O14344"],"synonyms":[{"name":"IMP dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2F12.14c","type":"related"},{"name":"Spom972h-guaB","type":"exact"}],"termid":"PR:O14344"}


id: PBO:0116598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFNG regulatory antisense RNA 1","termid":"PBO:0116598"}


id: GO:0071028
data:
  {"annotated_genes":["SJAG_00854","SJAG_01191","SJAG_02720","SJAG_03883","SJAG_01867","SJAG_04768","SJAG_04601","SJAG_02275","SJAG_00961","SJAG_01431","SJAG_02005","SJAG_04500","SJAG_04153","SJAG_04006","SJAG_00456","SJAG_01412","SJAG_03745","SJAG_00425","SJAG_00452","SJAG_01818","SJAG_03448","SJAG_01521","SJAG_04198","SJAG_04025","SJAG_01529","SJAG_03454","SJAG_02879","SJAG_04321","SJAG_02382","SJAG_04824","SJAG_01331","SJAG_01540","SJAG_03179","SJAG_05243","SJAG_03984","SJAG_02723","SJAG_02622","SJAG_04084","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71612,72073,72866,73586,74722,89423,89787,93417,95295,96247,96862,101358,115746,116186],"is_not":false,"summary":null,"term":"GO:0071028"},{"annotations":[90126],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[109551,118415,91207,99417,87838,104617,107770,109570,111609,91131,92583,92201,97059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[93787,97573,70677,118416,74948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[116632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[87839,89180,106629,109571,92704,95336,115851,118417,91132,110095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[106975],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant mRNAs within the nucleus.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:14718167","PMID:18644474","PMID:11586364","PMID:12417728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01818":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04500":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear mRNA surveillance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071049","GO:0071048","GO:0071033"],"synonyms":[{"name":"nuclear aberrant mRNA catabolic process","type":"exact"},{"name":"nuclear mRNA quality control","type":"exact"},{"name":"nuclear retention of pre-mRNA at the site of transcription","type":"narrow"},{"name":"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription","type":"narrow"},{"name":"nuclear retention of unspliced pre-mRNA at the site of transcription","type":"narrow"}],"termid":"GO:0071028","terms_by_termid":{"GO:0033621":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0120271":null,"GO:0120272":null}}


id: PBO:0067858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 160","termid":"PBO:0067858"}


id: PBO:0083783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in maturation of 18S rRNA; depletion leads to inhibited pre-rRNA processing and reduced polysome levels; localizes primarily to the nucleolus","termid":"PBO:0083783"}


id: GO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"}


id: PBO:0052635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 3","termid":"PBO:0052635"}


id: PBO:0080279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 42 pseudogene","termid":"PBO:0080279"}


id: PBO:0072695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and SH3 domain containing 1","termid":"PBO:0072695"}


id: PBO:0117388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 6, lysophospholipase","termid":"PBO:0117388"}


id: PBO:0068799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 36, pseudogene","termid":"PBO:0068799"}


id: PBO:0059287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 2","termid":"PBO:0059287"}


id: MONDO:0021046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant biphasic neoplasm that arises from the breast parenchyma. It is characterized by the presence of an epithelial and a mesenchymal (stromal) component. The typical examples are fibroadenoma and phyllodes tumor.","definition_xrefs":["NCIT:C40405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroepithelial neoplasm","termid":"MONDO:0021045"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibroepithelial neoplasm","secondary_identifiers":["UMLS:C1511309","ONCOTREE:BFN","MEDGEN:267408"],"synonyms":[{"name":"BFN","type":"related"},{"name":"breast fibroepithelial neoplasm","type":"exact"},{"name":"breast fibroepithelial neoplasms","type":"related"},{"name":"breast fibroepithelial tumor","type":"exact"},{"name":"breast fibroepithelial tumour","type":"exact"}],"termid":"MONDO:0021046","xrefs":{"Monarch":{"xref_id":"0021046"}}}


id: GO:0017143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving insecticides, chemicals used to kill insects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"part_of","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"insecticide metabolic process","secondary_identifiers":["GO:0017138"],"synonyms":[{"name":"insecticide metabolism","type":"exact"}],"termid":"GO:0017143"}


id: FYPO:0006828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular zinc level","termid":"FYPO:0001552"},{"relation_name":"is_a","term_name":"increased level of substance in cytosol","termid":"FYPO:0001948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cytosolic zinc level","synonyms":[{"name":"increased cytosolic zinc ion level","type":"exact"},{"name":"increased cytosolic zinc ion level during vegetative growth","type":"exact"},{"name":"increased cytosolic zinc level during mitotic cell cycle","type":"related"},{"name":"increased level of zinc ions in cytosol","type":"exact"},{"name":"increased levels of free cytosolic zinc","type":"exact"}],"termid":"FYPO:0006828"}


id: GO:0044052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via symbiont membrane budding, the evagination of a membrane resulting in formation of a vesicle.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by membrane budding (obsolete GO:0044052)","synonyms":[{"name":"interaction with host via substance released by symbiont membrane budding","type":"exact"}],"termid":"GO:0044052"}


id: MONDO:0020012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic or rheumatic disease (obsolete MONDO:0020012)","termid":"MONDO:0020012","xrefs":{"Monarch":{"xref_id":"0020012"}}}


id: PBO:0044436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily B member 1","termid":"PBO:0044436"}


id: PBO:0053030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 4 beta pseudogene 1","termid":"PBO:0053030"}


id: PBO:0028079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype","termid":"PBO:0028079"}


id: MONDO:0000696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile absence epilepsy (obsolete MONDO:0000696)","termid":"MONDO:0000696","xrefs":{"Monarch":{"xref_id":"0000696"}}}


id: PBO:0046174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK2A, pseudogene","termid":"PBO:0046174"}


id: PBO:0060489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 11","termid":"PBO:0060489"}


id: PBO:0080754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 2","termid":"PBO:0080754"}


id: PBO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic non-spherocytic hemolytic anemia","termid":"PBO:0000986"}


id: GO:0004648
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80046],"is_not":false,"summary":null,"term":"GO:0004648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"O-phospho-L-serine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-977333","RHEA:14329","GO:0004646","MetaCyc:PSERTRANSAM-RXN"],"synonyms":[{"name":"3-O-phospho-L-serine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"3-phosphoserine aminotransferase activity","type":"related"},{"name":"3PHP transaminase activity","type":"related"},{"name":"L-phosphoserine aminotransferase activity","type":"related"},{"name":"PSAT activity","type":"related"},{"name":"PdxC","type":"related"},{"name":"SerC","type":"related"},{"name":"hydroxypyruvic phosphate--glutamic transaminase activity","type":"related"},{"name":"phosphohydroxypyruvate transaminase activity","type":"related"},{"name":"phosphohydroxypyruvic--glutamic transaminase activity","type":"related"},{"name":"phosphoserine aminotransferase activity","type":"broad"},{"name":"phosphoserine transaminase activity","type":"broad"}],"termid":"GO:0004648","terms_by_termid":{"GO:0004648":null}}


id: PBO:0090340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc1","termid":"PBO:0090340"}


id: PBO:0108986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 10","termid":"PBO:0108986"}


id: MONDO:0006969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialadenitis is an infection of the salivary glands. It is usually caused by a virus or bacteria. The parotid (in front ofthe ear) and submandibular (under the chin) glands are most commonly affected. Sialadenitis may be associated with pain, tenderness, redness, and gradual, localized swelling of the affected area. Sialadenitis most commonly affects the elderly and chronically ill especially those with dry mouth or who are dehydrated, but can also affected people of any age including newborn babies. Diagnosis is usually made by clinical exam but a CT scan, MRI scan or ultrasound may be done if the doctor suspects an abscess or to look for stones. Treatment may include an antibiotic (if bacterial), warm compresses, increasing fluid intake and good oral hygiene. Most salivary gland infections go away on their own or are cured with treatment. Complications are not common.","direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"},{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"sialadenitis","secondary_identifiers":["SCTID:42982001","EFO:1001179","MedDRA:10040627","NCIT:C26882","MESH:D012793","UMLS:C0037023","ICD9:527.2","DOID:10303","MEDGEN:48657","NCIT:C115165"],"synonyms":[{"name":"adenitis, salivary gland","type":"related"},{"name":"lymphadenitis (disease) of saliva-secreting gland","type":"exact"},{"name":"saliva-secreting gland lymphadenitis (disease)","type":"exact"},{"name":"salivary gland inflammation","type":"related"},{"name":"sialitis","type":"exact"},{"name":"sialoadenitis","type":"exact"}],"termid":"MONDO:0006969","xrefs":{"Monarch":{"xref_id":"0006969"}}}


id: GO:0097345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.","definition_xrefs":["GOC:pg","PMID:21041309","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902110"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0007005","GO:0023052"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization","synonyms":[{"name":"MOMP","type":"exact"},{"name":"mitochondrial outer membrane permeabilization during apoptotic cell death","type":"broad"},{"name":"mitochondrion outer membrane permeabilization","type":"exact"}],"termid":"GO:0097345"}


id: PBO:0026927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation","termid":"PBO:0026927"}


id: GO:0030849
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any chromosome other than a sex chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"autosome","secondary_identifiers":["Wikipedia:Autosome"],"termid":"GO:0030849"}


id: FYPO:0005601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of one or more chromosomes is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology","termid":"FYPO:0005600"},{"relation_name":"output_of","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromosome morphology during meiotic cell cycle","termid":"FYPO:0005601"}


id: GO:0180024
data:
  {"annotated_genes":["SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104051],"is_not":false,"summary":null,"term":"GO:0180024"}]},"cv_name":"molecular_function","definition":"An activity in which a protein, or group of proteins, acts to restrict the size of a fenestration in a membrane or membrane system (i.e. restrict the diameter of a hole in a membrane). An example of this is the molecular function is performed by ESCRT-III proteins at the nuclear envelope of fission yeast during anaphase B.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane grommet activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180024","terms_by_termid":{"GO:0180024":null}}


id: PBO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 1","termid":"PBO:0060880"}


id: PBO:0055871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: PBO:0112604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN signalling GTPase Spg1","termid":"PBO:0112604"}


id: GO:0090113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The GTP hydrolysis process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis (obsolete GO:0090113)","termid":"GO:0090113"}


id: MONDO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the urethra. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign urethral neoplasm","termid":"MONDO:0004177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra leiomyoma","secondary_identifiers":["DOID:2142","NCIT:C6171","MEDGEN:237035","UMLS:C1336888"],"synonyms":[{"name":"leiomyoma of the urethra","type":"exact"},{"name":"leiomyoma of urethra","type":"exact"},{"name":"urethra leiomyoma","type":"exact"},{"name":"urethral leiomyoma","type":"exact"}],"termid":"MONDO:0002222","xrefs":{"Monarch":{"xref_id":"0002222"}}}


id: FYPO:0006122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein methylation during vegetative growth","synonyms":[{"name":"abnormal protein methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006122"}


id: PBO:0025469
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult Refsum disease","termid":"PBO:0025469"}


id: MONDO:0015598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrodermatitis continua suppurativa of Hallopeau (obsolete MONDO:0015598)","termid":"MONDO:0015598","xrefs":{"Monarch":{"xref_id":"0015598"}}}


id: PR:O59733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor SYF2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03374","PRO:DNx","PANTHER:PTHR13264:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor syf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.13c","secondary_identifiers":["UniProtKB:O59733"],"synonyms":[{"name":"Spom972h-SYF2","type":"exact"}],"termid":"PR:O59733"}


id: PBO:0043332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal liver metastasis associated transcript 3","termid":"PBO:0043332"}


id: GO:0001798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIa hypersensitivity","synonyms":[{"name":"activation of type IIa hypersensitivity","type":"narrow"},{"name":"stimulation of type IIa hypersensitivity","type":"narrow"},{"name":"up regulation of type IIa hypersensitivity","type":"exact"},{"name":"up-regulation of type IIa hypersensitivity","type":"exact"},{"name":"upregulation of type IIa hypersensitivity","type":"exact"}],"termid":"GO:0001798"}


id: MONDO:0011712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van der Woude syndrome in which the cause of the disease is a mutation in the GRHL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"van der Woude syndrome","termid":"MONDO:0019508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van der Woude syndrome 2","secondary_identifiers":["OMIM:606713","MEDGEN:338272","MESH:C536529","UMLS:C1847604","GARD:7846"],"synonyms":[{"name":"GRHL3 van der Woude syndrome","type":"exact"},{"name":"VAN DER Woude syndrome 2","type":"related"},{"name":"VWS2","type":"related"},{"name":"Van Der Woude syndrome type 2","type":"exact"},{"name":"van der Woude syndrome 2","type":"exact"},{"name":"van der Woude syndrome caused by mutation in GRHL3","type":"exact"}],"termid":"MONDO:0011712","xrefs":{"Monarch":{"xref_id":"0011712"}}}


id: GO:0051116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Co(2+) + H2O + hydrogenobyrinate a,c-diamide = ADP + cob(II)yrinate a,c diamide + 4 H+ + phosphate.","definition_xrefs":["EC:6.6.1.2","RHEA:15341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cobaltochelatase activity","secondary_identifiers":["MetaCyc:R342-RXN","KEGG_REACTION:R05227"],"synonyms":[{"name":"CobN-CobST","type":"related"},{"name":"CobNST","type":"narrow"},{"name":"hydrogenobyrinic acid a,c-diamide cobaltochelatase activity","type":"exact"},{"name":"hydrogenobyrinic-acid-a,c-diamide:cobalt cobalt-ligase (ADP-forming)","type":"related"}],"termid":"GO:0051116"}


id: MONDO:1011873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal vacuolar disorder, non-human animal","secondary_identifiers":["OMIA:001303"],"termid":"MONDO:1011873","xrefs":{"Monarch":{"xref_id":"1011873"}}}


id: PBO:0091996
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter located -692--679","termid":"PBO:0091996"}


id: GO:0062041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of meiotic sister chromatid arm separation, the cell cycle process in which sister chromatid arms are physically detached from each other during meiosis.","definition_xrefs":["PMID:20383139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic chromosome separation","termid":"GO:1905134"},{"relation_name":"positively_regulates","term_name":"meiotic sister chromatid arm separation","termid":"GO:0051755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic sister chromatid arm separation","termid":"GO:0062041"}


id: MONDO:0013605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brittle cornea syndrome in which the cause of the disease is a mutation in the PRDM5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brittle cornea syndrome","termid":"MONDO:0009242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"brittle cornea syndrome 2","secondary_identifiers":["UMLS:C3280011","GARD:15764","DOID:0080729","MEDGEN:481641","OMIM:614170"],"synonyms":[{"name":"BCS2","type":"related"},{"name":"PRDM5 brittle cornea syndrome","type":"exact"},{"name":"brittle cornea syndrome 2","type":"exact"},{"name":"brittle cornea syndrome caused by mutation in PRDM5","type":"exact"},{"name":"brittle cornea syndrome type 2","type":"exact"}],"termid":"MONDO:0013605","xrefs":{"Monarch":{"xref_id":"0013605"}}}


id: PBO:0013443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft1 (predicted)","termid":"PBO:0013443"}


id: GO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transition from a cell in the S phase to the G2 phase.","definition_xrefs":["GOC:hjd","PMID:15161931","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete S/G2 transition of mitotic cell cycle (obsolete GO:0002198)","synonyms":[{"name":"S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0002198"}


id: MONDO:1010051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, non-human animal","secondary_identifiers":["OMIA:000278"],"termid":"MONDO:1010051","xrefs":{"Monarch":{"xref_id":"1010051"}}}


id: PBO:0091943
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin Involved in G1","termid":"PBO:0091943"}


id: PBO:0003386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf11","termid":"PBO:0003386"}


id: MONDO:0850081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic metopic and sagittal craniosynostosis","secondary_identifiers":["Orphanet:620192","GARD:22478","UMLS:C5680393","MEDGEN:1842791"],"termid":"MONDO:0850081","xrefs":{"Monarch":{"xref_id":"0850081"}}}


id: MONDO:0021019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked recessive ocular albinism (XLOA) is a rare disorder characterized by ocular hypopigmentation, foveal hypoplasia, nystagmus, photodysphoria, and reduced visual acuity in males.","definition_xrefs":["Orphanet:54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"albinism","termid":"MONDO:0043209"},{"relation_name":"is_a","term_name":"GPR143-related foveal hypoplasia","termid":"MONDO:0700230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"X-linked recessive ocular albinism","secondary_identifiers":["MESH:C537863","OMIM:300500","NCIT:C118785","MEDGEN:90991","GARD:8471","ICD9:270.2","icd11.foundation:846740259","SCTID:78642008","UMLS:C0342684"],"synonyms":[{"name":"Nettleship-Falls syndrome","type":"exact"},{"name":"Nettleship-Falls type ocular albinism","type":"related"},{"name":"OA1","type":"exact"},{"name":"X-linked ocular albinism","type":"related"},{"name":"XLOA","type":"exact"},{"name":"albinism, ocular, type 1","type":"related"},{"name":"albinism, ocular, type I","type":"related"},{"name":"ocular albinism type 1","type":"exact"},{"name":"ocular albinism, Nettleship-Falls type","type":"exact"},{"name":"ocular albinism, type I, Nettleship-Falls type","type":"exact"}],"termid":"MONDO:0021019","xrefs":{"Monarch":{"xref_id":"0021019"}}}


id: PBO:0051453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-48 (non-functional)","termid":"PBO:0051453"}


id: PBO:0059547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asn (AAU/C)","termid":"PBO:0059547"}


id: MOD:00966
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-tryptophan residue by a formadehyde adduct to 1,2,3,4-tetrahydro-beta-carboline-3-carboxylic acid.","definition_xrefs":["DeltaMass:339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2,3,4-tetrahydro-beta-carboline-3-carboxylic acid","termid":"MOD:00966"}


id: GO:0100027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cell separation after cytokinesis.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell separation after cytokinesis by transcription from RNA polymerase II promoter (obsolete GO:0100027)","termid":"GO:0100027"}


id: PBO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1","termid":"PBO:0003182"}


id: MONDO:0019760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amniotic band syndrome","termid":"MONDO:0015167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"terminal transverse defects of arm","secondary_identifiers":["MEDGEN:341800","Orphanet:93937","UMLS:C1857578","MESH:C565681"],"synonyms":[{"name":"congenital limb amputation","type":"exact"}],"termid":"MONDO:0019760","xrefs":{"Monarch":{"xref_id":"0019760"}}}


id: MOD:00583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a thiophosphono group (H2PO2S, 'thiophosphate').","definition_xrefs":["PubMed:12110917","Unimod:260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphorylated residue","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:00583"}


id: FYPO:0005616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"abolished protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005616"}


id: PBO:0052566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 3","termid":"PBO:0052566"}


id: GO:0004308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.","definition_xrefs":["EC:3.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-sialidase activity","termid":"GO:0016997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"exo-alpha-sialidase activity","secondary_identifiers":["MetaCyc:3.2.1.18-RXN","Reactome:R-HSA-1605724","Reactome:R-HSA-4084994","Reactome:R-HSA-4085029","Reactome:R-HSA-9638120","Reactome:R-HSA-1605723","Reactome:R-HSA-1605768","Reactome:R-HSA-4341669","Reactome:R-HSA-168870","Reactome:R-HSA-4084999"],"synonyms":[{"name":"N-acylneuraminate glycohydrolase activity","type":"related"},{"name":"acetylneuraminidase activity","type":"related"},{"name":"acetylneuraminyl hydrolase activity","type":"related"},{"name":"alpha-neuraminidase activity","type":"related"},{"name":"neuraminidase activity","type":"related"},{"name":"sialidase activity","type":"related"}],"termid":"GO:0004308"}


id: GO:0035059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that facilitates the assembly of nucleosomes on to newly synthesized DNA. In Drosophila, the complex comprises ASF1 and histones H3 and H4.","definition_xrefs":["GOC:bf","PMID:10591219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RCAF complex","synonyms":[{"name":"replication-coupling assembly factor complex","type":"exact"}],"termid":"GO:0035059"}


id: PBO:0052698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 6","termid":"PBO:0052698"}


id: PBO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 1","termid":"PBO:0051873"}


id: GO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron in the metanephros. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in metanephric nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in metanephric nephron development","type":"exact"},{"name":"proximal/distal metanephric nephron patterning","type":"exact"}],"termid":"GO:0072272"}


id: GO:0009847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological and developmental changes that occur in a spore following release from dormancy up to the earliest signs of growth (e.g. emergence from a spore wall).","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore germination","secondary_identifiers":["GO:0075005"],"synonyms":[{"name":"spore germination on or near host","type":"narrow"}],"termid":"GO:0009847"}


id: PBO:0062661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 2 pseudogene","termid":"PBO:0062661"}


id: GO:0018352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and pyridoxal-5-phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}


id: GO:0032304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of an icosanoid from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid transport","termid":"GO:2000192"},{"relation_name":"negatively_regulates","term_name":"icosanoid secretion","termid":"GO:0032309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of icosanoid secretion","synonyms":[{"name":"down regulation of icosanoid secretion","type":"exact"},{"name":"down-regulation of icosanoid secretion","type":"exact"},{"name":"downregulation of icosanoid secretion","type":"exact"},{"name":"inhibition of icosanoid secretion","type":"narrow"},{"name":"negative regulation of eicosanoid secretion","type":"exact"}],"termid":"GO:0032304"}


id: PBO:0040866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMAL2 antisense RNA 1","termid":"PBO:0040866"}


id: GO:0018068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to L-2',4',5'-topaquinone, characteristic of the active site of copper amine oxidases.","definition_xrefs":["RESID:AA0147"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-2',4',5'-topaquinone biosynthetic process from peptidyl-tyrosine (obsolete GO:0018068)","synonyms":[{"name":"peptidyl-L-2',4',5'-topaquinone anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018068"}


id: GO:0045009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular membrane-bounded particle found in fungi and containing chitin synthase; it synthesizes chitin microfibrils. Chitin synthase activity exists in chitosomes and they are proposed to act as a reservoir for regulated transport of chitin synthase enzymes to the division septum.","definition_xrefs":["PMID:8970154","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chitosome","termid":"GO:0045009"}


id: FYECO:0000162
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119548,119411,119838,119840,119549,119826,119410,119533,119824,119708,119912,119827,119550,119817,119818,119819,119820,119821,119822,119823,119833,119834,119837,119839,119828,119551,119829,119830,119831,119832,119536,119547],"is_not":false,"summary":null,"term":"FYECO:0000162"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is high (eg around 8%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01330":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":19,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta frameshift(aa61->stop)","display_uniquename":"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-2","expression":"Not assayed or wild type"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta mpe1-R77W(aa)","display_uniquename":"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02668:allele-1","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02668","SJAG_02621","SJAG_03118","SJAG_04574"],"name":"high glucose YES","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_04061","SJAG_01330","SJAG_02392","SJAG_02763","SJAG_03916","SJAG_00426","SJAG_01745","SJAG_03689","SJAG_02409","SJAG_02594","SJAG_02621","SJAG_03356","SJAG_04574","SJAG_03449"],"single_locus_genotype_uniquenames":["clr4delta","pom1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","arb1delta","ago1delta","mad2delta","ned1delta","chp1delta","rdp1delta","lem2delta","man1delta","dcr1delta","stc1delta","arb2delta"],"synonyms":[{"name":"high glucose rich medium","type":"related"}],"termid":"FYECO:0000162","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0013772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp101","termid":"PBO:0013772"}


id: PBO:0028800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028800"}


id: PBO:0048187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor associated protein like 2","termid":"PBO:0048187"}


id: PBO:0049777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 5","termid":"PBO:0049777"}


id: GO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which one organism decreases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["PMID:19837656","GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of blood pressure in another organism (obsolete GO:0044496)","synonyms":[{"name":"negative regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044496"}


id: GO:0060450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hindgut contraction","termid":"GO:0043134"},{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hindgut contraction","termid":"GO:0060450"}


id: MONDO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the intrahepatic bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic bile duct cancer","secondary_identifiers":["DOID:12298","SCTID:187777008","MEDGEN:639748","ICD9:155.1","UMLS:C0546835"],"synonyms":[{"name":"Ca intrahepatic bile ducts","type":"exact"},{"name":"cancer of intrahepatic bile duct","type":"exact"},{"name":"malignant intrahepatic bile duct neoplasm","type":"exact"},{"name":"malignant neoplasm of intrahepatic bile duct","type":"exact"},{"name":"malignant neoplasm of intrahepatic bile ducts","type":"exact"},{"name":"malignant neoplasm of intrahepatic biliary passages","type":"exact"}],"termid":"MONDO:0001487","xrefs":{"Monarch":{"xref_id":"0001487"}}}


id: PBO:0051311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-3 (pseudogene)","termid":"PBO:0051311"}


id: GO:1903844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to transforming growth factor beta stimulus.","definition_xrefs":["PMID:22269326","GOC:BHF_miRNA","GOC:rph","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"regulation of cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:1903844"}


id: GO:0032400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"melanosome localization","synonyms":[{"name":"melanosome localisation","type":"exact"}],"termid":"GO:0032400"}


id: PBO:0064425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 3","termid":"PBO:0064425"}


id: PBO:0043018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 2","termid":"PBO:0043018"}


id: MONDO:0007829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"},{"relation_name":"is_a","term_name":"familial intrahepatic cholestasis","termid":"MONDO:0017290"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis of pregnancy","termid":"MONDO:0100429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, intrahepatic, of pregnancy, 1","secondary_identifiers":["OMIM:147480","DOID:0070228","MEDGEN:762759","UMLS:C3549845","GARD:15079"],"synonyms":[{"name":"ICP1","type":"related"},{"name":"cholestasis, intrahepatic, of pregnancy, 1","type":"exact"},{"name":"cholestasis, intrahepatic, of pregnancy, type 1","type":"exact"},{"name":"cholestasis, pregnancy-related, 1","type":"related"}],"termid":"MONDO:0007829","xrefs":{"Monarch":{"xref_id":"0007829"}}}


id: MONDO:0003668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"seminoma","termid":"MONDO:0003001"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extragonadal seminoma","secondary_identifiers":["NCIT:C7327","MEDGEN:234243","DOID:5838","UMLS:C1333502"],"synonyms":[{"name":"extragonadal primary seminoma","type":"exact"},{"name":"extragonadal seminoma","type":"exact"},{"name":"primary extragonadal seminoma","type":"exact"}],"termid":"MONDO:0003668","xrefs":{"Monarch":{"xref_id":"0003668"}}}


id: PR:Q9UUH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leptin receptor overlapping transcript-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.11","secondary_identifiers":["UniProtKB:Q9UUH1"],"synonyms":[{"name":"Spom972h-LEPROTL1","type":"exact"}],"termid":"PR:Q9UUH1"}


id: GO:0070985
data:
  {"annotated_genes":["SJAG_04614","SJAG_03618","SJAG_00150"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60967,76618,112391],"is_not":false,"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the holo TFIIH complex. In Saccharomyces/human, TFIIK contains Ccl1p/Cyclin H, Tfb3p/MAT1 and Kin28p/CDK7.","definition_xrefs":["GOC:mah","PMID:22572993","PMID:19818408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"transcription factor TFIIH holo complex","termid":"GO:0005675"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_03618":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"transcription factor TFIIK complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mcs6/Mcs2/Pmh1 complex","type":"narrow"},{"name":"TFIIK complex","type":"exact"},{"name":"cyclin H-CDK7 complex","type":"related"}],"termid":"GO:0070985","terms_by_termid":{"GO:0070985":null}}


id: MONDO:0034971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare eyelid malposition disorder characterized by congenital abnormal inversion of the eyelid towards the globe, potentially causing mechanical irritation of the ocular surface by the eyelashes, which may lead to corneal abrasion and scarring with visual impairment. Typical initial symptoms are foreign body sensation, redness, tearing, and ocular discharge.","definition_xrefs":["Orphanet:519386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital entropion","termid":"MONDO:0020159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital entropion","secondary_identifiers":["icd11.foundation:1290880184","GARD:22123"],"termid":"MONDO:0034971","xrefs":{"Monarch":{"xref_id":"0034971"}}}


id: GO:0072317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glucan endo-1,3-beta-D-glucosidase activity involved in ascospore release from ascus (obsolete GO:0072317)","termid":"GO:0072317"}


id: PR:Q09894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.07c","synonyms":[{"name":"Spom972h-SPAC24B11.07c","type":"exact"}],"termid":"PR:Q09894"}


id: GO:0045721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"negative regulation of gluconeogenesis","synonyms":[{"name":"down regulation of gluconeogenesis","type":"exact"},{"name":"down-regulation of gluconeogenesis","type":"exact"},{"name":"downregulation of gluconeogenesis","type":"exact"},{"name":"inhibition of gluconeogenesis","type":"narrow"}],"termid":"GO:0045721"}


id: PBO:0082502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase (II) epsilon; a chromosomal DNA replication polymerase that exhibits processivity and proofreading exonuclease activity; participates in leading-strand synthesis during DNA replication; also involved in DNA synthesis during DNA repair; interacts extensively with Mrc1p","termid":"PBO:0082502"}


id: GO:0052093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiotic cellular or anatomical structure for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of specialized structure for nutrient acquisition","synonyms":[{"name":"formation by organism of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation of specialized structure for nutrient acquisition from host","type":"exact"}],"termid":"GO:0052093"}


id: PBO:0071418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 24","termid":"PBO:0071418"}


id: GO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}


id: PBO:0002948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein of unknown function","termid":"PBO:0002948"}


id: PATO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's possessing a small, spike-like shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spur shaped","termid":"PATO:0002540"}


id: GO:0042671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a retinal cone cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate determination","termid":"GO:0043703"},{"relation_name":"part_of","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate determination","termid":"GO:0042671"}


id: GO:0045949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphorus utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus utilization","termid":"GO:0006795"},{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"positively_regulates","term_name":"phosphorus utilization","termid":"GO:0006794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphorus utilization","synonyms":[{"name":"activation of phosphorus utilization","type":"narrow"},{"name":"stimulation of phosphorus utilization","type":"narrow"},{"name":"up regulation of phosphorus utilization","type":"exact"},{"name":"up-regulation of phosphorus utilization","type":"exact"},{"name":"upregulation of phosphorus utilization","type":"exact"}],"termid":"GO:0045949"}


id: MONDO:0012824
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87597],"is_not":false,"summary":null,"term":"MONDO:0012824"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the HSPD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizaeus-Merzbacher-like disease","termid":"MONDO:0017226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060789","NANDO:2201293","MEDGEN:383026","OMIM:612233","MESH:C567390","UMLS:C2677109","GARD:17294","Orphanet:280288","NANDO:1200581"],"synonyms":[{"name":"HLD4","type":"exact"},{"name":"HSPD1 leukodystrophy","type":"exact"},{"name":"MitCHAP60 disease","type":"exact"},{"name":"Mitchap60 disease","type":"related"},{"name":"Pelizaeus-Merzbacher-like disease due to HSPD1 mutation","type":"exact"},{"name":"hypomyelinating leukodystrophy type 4","type":"exact"},{"name":"leukodystrophy caused by mutation in HSPD1","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 4","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 4","type":"exact"},{"name":"mitochondrial HSP60 chaperonopathy","type":"exact"},{"name":"mitochondrial Hsp60 chaperonopathy","type":"related"}],"termid":"MONDO:0012824","terms_by_termid":{"MONDO:0012824":null},"xrefs":{"Monarch":{"xref_id":"0012824"}}}


id: PBO:0039266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 18 family member A1","termid":"PBO:0039266"}


id: PR:O13696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.03","secondary_identifiers":["UniProtKB:O13696"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"SPAC11G7.03","type":"related"},{"name":"Spom972h-IDH3G","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13696"}


id: PATO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A consumption which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000768 decreased consumption (obsolete PATO:0000768)","synonyms":[{"name":"decreased propensity to consume","type":"related"},{"name":"low consumption","type":"exact"}],"termid":"PATO:0000768"}


id: PBO:0080542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 1","termid":"PBO:0080542"}


id: PBO:0052563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C","termid":"PBO:0052563"}


id: MONDO:0017675
data:
  {"annotated_genes":["SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"}]},"cv_name":"mondo","definition":"A palmoplantar keratosis characterized by keratoses with a \\\"raindrop\\\" pattern on the palmoplantar surface, skin lesions which may involve the whole of the palmoplantar surface, or may be more restricted in their distribution.","definition_xrefs":["Wikipedia:Palmoplantar_keratoderma#Punctate","DOID:0060361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:402773000","icd11.foundation:1212361548","Orphanet:307967","GARD:21297","MEDGEN:870406","UMLS:C4024851"],"synonyms":[{"name":"punctate PPK","type":"exact"},{"name":"punctate keratosis palmoplantaris","type":"exact"},{"name":"punctate palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017675","terms_by_termid":{"MONDO:0007858":null},"xrefs":{"Monarch":{"xref_id":"0017675"}}}


id: FYPO:0003393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which electron transport involved in cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal respiratory electron transport","synonyms":[{"name":"abnormal respiratory electron transport chain","type":"exact"},{"name":"abnormal respiratory electron transport during mitotic cell cycle","type":"related"},{"name":"abnormal respiratory electron transport process during vegetative growth","type":"exact"}],"termid":"FYPO:0003393"}


id: PBO:0042216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin O","termid":"PBO:0042216"}


id: GO:2000508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"}


id: PBO:0091526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly lipid binding protein Mug56","termid":"PBO:0091526"}


id: PBO:0069681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 958, pseudogene","termid":"PBO:0069681"}


id: GO:0047362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dithioerythritol + thiosulfate = hydrogen sulfide + dithioerythritol disulfide + sulfite.","definition_xrefs":["EC:2.8.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"thiosulfate-dithiol sulfurtransferase activity","secondary_identifiers":["MetaCyc:2.8.1.5-RXN","RHEA:15121"],"synonyms":[{"name":"TSR","type":"related"},{"name":"thiosulfate reductase activity","type":"related"},{"name":"thiosulfate:dithioerythritol sulfurtransferase activity","type":"related"},{"name":"thiosulphate-dithiol sulphurtransferase activity","type":"exact"}],"termid":"GO:0047362"}


id: GO:0102650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetoacetyl-ACP + L-tryptophan + ATP = cyclo-acetoacetyl-L-tryptophan + AMP + diphosphoric acid + 2 H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclo-acetoacetyl-L-tryptophan synthetase activity (obsolete GO:0102650)","termid":"GO:0102650"}


id: MONDO:0044137
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[86806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[87501,87502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","definition":"Any disease affecting the vitreous body of the eye.","definition_xrefs":["NCIT:C45256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02286":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous body disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:379.29","SCTID:76682005","MEDGEN:56361","EFO:0008624","UMLS:C0155365"],"synonyms":[{"name":"disease of vitreous body","type":"exact"},{"name":"disease or disorder of vitreous body","type":"exact"},{"name":"disorder of vitreous body","type":"exact"},{"name":"vitreous body disease","type":"exact"},{"name":"vitreous body disease or disorder","type":"exact"},{"name":"vitreous body disorder","type":"exact"}],"termid":"MONDO:0044137","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0044137"}}}


id: PBO:0080313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 77 pseudogene","termid":"PBO:0080313"}


id: GO:0050301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + streptomycin 6-phosphate = phosphate + streptomycin.","definition_xrefs":["RHEA:10688","EC:3.1.3.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"streptomycin-6-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02228","MetaCyc:STREPTOMYCIN-6-PHOSPHATASE-RXN"],"synonyms":[{"name":"streptomycin 6-phosphate phosphatase activity","type":"related"},{"name":"streptomycin 6-phosphate phosphohydrolase activity","type":"related"},{"name":"streptomycin-6-P phosphohydrolase activity","type":"related"},{"name":"streptomycin-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050301"}


id: GO:0050095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + H+ = 3-methylthiopropanamine + CO2.","definition_xrefs":["RHEA:17757","EC:4.1.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"methionine decarboxylase activity","secondary_identifiers":["MetaCyc:METHIONINE-DECARBOXYLASE-RXN","KEGG_REACTION:R00656"],"synonyms":[{"name":"L-methionine carboxy-lyase (3-methylthiopropanamine-forming)","type":"related"},{"name":"L-methionine carboxy-lyase activity","type":"related"},{"name":"L-methionine decarboxylase activity","type":"related"}],"termid":"GO:0050095"}


id: PBO:0074696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70F","termid":"PBO:0074696"}


id: GO:1901580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901580)","synonyms":[{"name":"regulation of telomeric RNA transcription from Pol II promoter","type":"exact"}],"termid":"GO:1901580"}


id: MONDO:0033563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 90","secondary_identifiers":["OMIM:619007","UMLS:C5436588","MEDGEN:1733837","DOID:0112147"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 90","type":"related"},{"name":"RP90","type":"related"}],"termid":"MONDO:0033563","xrefs":{"Monarch":{"xref_id":"0033563"}}}


id: PBO:0080025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 11","termid":"PBO:0080025"}


id: PBO:0079825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 4","termid":"PBO:0079825"}


id: PBO:0078393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 3-1","termid":"PBO:0078393"}


id: GO:0060282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of oocyte development","termid":"GO:0060281"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oocyte development","termid":"GO:0060282"}


id: MONDO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the gall bladder","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder carcinoma","secondary_identifiers":["DOID:4948","NCIT:C3844","SCTID:372140005","UMLS:C0235782","EFO:1001956","MEDGEN:116001"],"synonyms":[{"name":"Gall bladder carcinoma (adeno)","type":"exact"},{"name":"Gall bladder carcinoma (adenocarcinoma)","type":"exact"},{"name":"cancer of gallbladder","type":"exact"},{"name":"cancer of the gallbladder","type":"exact"},{"name":"carcinoma gallbladder","type":"exact"},{"name":"carcinoma of gall bladder","type":"exact"},{"name":"carcinoma of gallbladder","type":"exact"},{"name":"carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder carcinoma","type":"exact"},{"name":"gallbladder cancer","type":"broad"},{"name":"gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0003220","xrefs":{"Monarch":{"xref_id":"0003220"}}}


id: PBO:0065591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 7","termid":"PBO:0065591"}


id: GO:0102500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-D-glucose + a plant soluble heteroglycan = a plant soluble heteroglycan + maltose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-maltose 4-alpha-glucanotransferase activity (obsolete GO:0102500)","termid":"GO:0102500"}


id: MONDO:1010524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, American mink","secondary_identifiers":["OMIA:000197-452646"],"termid":"MONDO:1010524","xrefs":{"Monarch":{"xref_id":"1010524"}}}


id: FYPO:0003982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of disulfide oxidoreductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal disulfide oxidoreductase activity","termid":"FYPO:0003982"}


id: GO:1990252
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contributes to the endocytic process and bud growth in yeast. It is involved in the precise timing of actin assembly during endocytosis.","definition_xrefs":["PMID:19713939","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0031410"],"is_obsolete":false,"name":"Syp1 complex","synonyms":[{"name":"Syp1 dimer","type":"exact"}],"termid":"GO:1990252"}


id: FYPO:0002826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal gamma-tubulin complex assembly","synonyms":[{"name":"normal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"normal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002826"}


id: PBO:0088766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Rpp40","termid":"PBO:0088766"}


id: PBO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin responsive transcription factor Prz1","termid":"PBO:0000589"}


id: GO:1902757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["PMID:23201473","GO_REF:0000068","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolism","type":"exact"}],"termid":"GO:1902757"}


id: PBO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin associated protein","termid":"PBO:0045665"}


id: MONDO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amelogenesis imperfecta type 1C (obsolete MONDO:0000907)","termid":"MONDO:0000907","xrefs":{"Monarch":{"xref_id":"0000907"}}}


id: PBO:0011470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Klf1","termid":"PBO:0011470"}


id: PBO:0055333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2761","termid":"PBO:0055333"}


id: PBO:0052799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 39","termid":"PBO:0052799"}


id: PBO:0068017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 322","termid":"PBO:0068017"}


id: FYPO:0007116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein in the actomyosin contractile ring is lower than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:23615450","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased protein level in actomyosin contractile ring during mitotic interphase","synonyms":[{"name":"decreased protein level in actomyosin contractile ring during interphase during vegetative growth","type":"exact"},{"name":"decreased protein level in actomyosin contractile ring during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level in contractile ring during mitotic interphase","type":"exact"},{"name":"reduced protein level in actomyosin contractile ring during mitotic interphase","type":"exact"}],"termid":"FYPO:0007116"}


id: GO:0019789
data:
  {"annotated_genes":["SJAG_02082","SJAG_00604","SJAG_00727","SJAG_03175","SJAG_01776"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76188,104797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[72842,104678,72734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both X-SUMO and Y-SUMO are covalent linkages.","definition_xrefs":["GOC:rn","PMID:11265250","PMID:11031248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_03175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746","GO:0140096","GO:0019787"],"is_obsolete":false,"name":"SUMO transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4755536","Reactome:R-HSA-3900070","Reactome:R-HSA-3296126","Reactome:R-HSA-4551661","Reactome:R-HSA-4568914","Reactome:R-HSA-4341073","Reactome:R-HSA-3900194","Reactome:R-HSA-4090408","Reactome:R-HSA-4570553","Reactome:R-HSA-4551721","Reactome:R-HSA-4615910","Reactome:R-HSA-4615839","Reactome:R-HSA-4568863","Reactome:R-HSA-4570496","Reactome:R-HSA-4615933","Reactome:R-HSA-3000434","Reactome:R-HSA-3000449","Reactome:R-HSA-5684052","Reactome:R-HSA-4719413","Reactome:R-HSA-4570485","Reactome:R-HSA-4755478","Reactome:R-HSA-2997723","Reactome:R-HSA-4551724","Reactome:R-HSA-4615873","Reactome:R-HSA-4720446","Reactome:R-HSA-3108203","Reactome:R-HSA-4341025","Reactome:R-HSA-4755526","Reactome:R-HSA-2997706","Reactome:R-HSA-3900177","Reactome:R-HSA-5228521","Reactome:R-HSA-4086088","Reactome:R-HSA-4085372","Reactome:R-HSA-4755479","Reactome:R-HSA-3234084","Reactome:R-HSA-4551649","Reactome:R-HSA-4090284","Reactome:R-HSA-4570467","Reactome:R-HSA-4570493","Reactome:R-HSA-4641345","Reactome:R-HSA-4085296","Reactome:R-HSA-4551683","Reactome:R-HSA-3968414","Reactome:R-HSA-3927959","Reactome:R-HSA-4551604","Reactome:R-HSA-4570554","Reactome:R-HSA-2993780","Reactome:R-HSA-4616015","Reactome:R-HSA-6804485","Reactome:R-HSA-3234094","Reactome:R-HSA-3000399","Reactome:R-HSA-3000433","Reactome:R-HSA-4755411","Reactome:R-HSA-4085994","Reactome:R-HSA-3000383","Reactome:R-HSA-4570463","Reactome:R-HSA-5228523","Reactome:R-HSA-4655355","Reactome:R-HSA-3000411","Reactome:R-HSA-3000348","Reactome:R-HSA-4615889","Reactome:R-HSA-4341016","Reactome:R-HSA-4086083","Reactome:R-HSA-4551679","Reactome:R-HSA-4755494","Reactome:R-HSA-4615900","Reactome:R-HSA-2993769","Reactome:R-HSA-4717521","Reactome:R-HSA-4656914","Reactome:R-HSA-4719424","Reactome:R-HSA-3899291","Reactome:R-HSA-4546386","Reactome:R-HSA-3108209","Reactome:R-HSA-4615987","Reactome:R-HSA-4090288","Reactome:R-HSA-4551727","Reactome:R-HSA-4568848","Reactome:R-HSA-4720432","Reactome:R-HSA-4655431","Reactome:R-HSA-4085347","Reactome:R-HSA-4615872","Reactome:R-HSA-2997616","Reactome:R-HSA-4085318","Reactome:R-HSA-4568846","Reactome:R-HSA-5228508","Reactome:R-HSA-8956365","Reactome:R-HSA-2997709","Reactome:R-HSA-4719448","Reactome:R-HSA-3903017","Reactome:R-HSA-4570499","Reactome:R-HSA-3968362","Reactome:R-HSA-4551738","Reactome:R-HSA-3465545","Reactome:R-HSA-3234081","Reactome:R-HSA-4085350","Reactome:R-HSA-3900047","Reactome:R-HSA-4655440","Reactome:R-HSA-4551648","Reactome:R-HSA-2993790","Reactome:R-HSA-5228525","Reactome:R-HSA-4570528","Reactome:R-HSA-4641362","Reactome:R-HSA-4615905","Reactome:R-HSA-4090390","Reactome:R-HSA-4641350","Reactome:R-HSA-4641342","Reactome:R-HSA-4551616","Reactome:R-HSA-3232162","Reactome:R-HSA-4341070","Reactome:R-HSA-4085992","Reactome:R-HSA-6790454","Reactome:R-HSA-3782535","GO:0016930","Reactome:R-HSA-4090281","Reactome:R-HSA-4719447","Reactome:R-HSA-3247493","Reactome:R-HSA-3927824","Reactome:R-HSA-3927886","Reactome:R-HSA-4341072","Reactome:R-HSA-4086036","Reactome:R-HSA-4551655","Reactome:R-HSA-3108212","Reactome:R-HSA-4717461","Reactome:R-HSA-4546387","Reactome:R-HSA-4719423","Reactome:R-HSA-4341048","Reactome:R-HSA-4546385","Reactome:R-HSA-4570489","Reactome:R-HSA-6804468","Reactome:R-HSA-5682607","GO:0019949","Reactome:R-HSA-4085331","Reactome:R-HSA-4086059","Reactome:R-HSA-4551768","Reactome:R-HSA-4655374","Reactome:R-HSA-4719436"],"synonyms":[{"name":"SMT3 conjugating enzyme","type":"related"},{"name":"SUMO conjugating enzyme activity","type":"related"}],"termid":"GO:0019789","terms_by_termid":{"GO:0061656":null,"GO:0061665":null}}


id: GO:0018667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexanone + NADPH + H+ + O2 = 6-hexanolide + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cyclohexanone monooxygenase activity","secondary_identifiers":["RHEA:24068","UM-BBD_reactionID:r0166","MetaCyc:CYCLOHEXANONE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"cyclohexanone 1,2-monooxygenase activity","type":"exact"},{"name":"cyclohexanone oxygenase activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (6-hydroxylating, 1,2-lactonizing) activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (lactone-forming)","type":"related"}],"termid":"GO:0018667"}


id: PBO:0029027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitotic_spindle","termid":"PBO:0029027"}


id: MONDO:0004266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal adenocarcinoma arising from the epithelium of the anal glands. The overlying anal mucosa does not show evidence of neoplastic changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus adenocarcinoma","termid":"MONDO:0002652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal gland adenocarcinoma","secondary_identifiers":["DOID:7531","MEDGEN:220409","NCIT:C5609","ICDO:8215/3","UMLS:C1266027","ONCOTREE:AGA"],"synonyms":[{"name":"adenocarcinoma of anal ducts","type":"exact"},{"name":"adenocarcinoma of anal gland","type":"related"},{"name":"adenocarcinoma of the anal gland","type":"exact"},{"name":"anal glands adenocarcinoma","type":"exact"}],"termid":"MONDO:0004266","xrefs":{"Monarch":{"xref_id":"0004266"}}}


id: PBO:0089812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,4-alpha-glucosidase","termid":"PBO:0089812"}


id: GO:0048650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to environmental cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caste determination","termid":"GO:0048648"},{"relation_name":"is_a","term_name":"polyphenic determination, influence by environmental factors","termid":"GO:0048651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination, influence by environmental factors","termid":"GO:0048650"}


id: SO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_insert","synonyms":[{"name":"engineered insert","type":"exact"}],"termid":"SO:0000915"}


id: GO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"platelet dense granule lumen","termid":"GO:0031089"}


id: FYPO:0007599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is increased at a site where silencing can be triggered by the ectopic tethering of a protein.","definition_xrefs":["PomBase:mah","PMID:23613586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at ectopic tethering site","synonyms":[{"name":"increased chromatin silencing at ectopic tethering site","type":"related"},{"name":"increased chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007599"}


id: PBO:0073694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 6","termid":"PBO:0073694"}


id: MONDO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 minimal pigment oculocutaneous albinism (OCA1-MP) is an extremely rare form of OCA1 with minimal pigment present, characterized by blond hair, variable iris transillumination, visual acuity ranging from 20/80-20/200 and white skin, with or without skin nevi.","definition_xrefs":["Orphanet:352734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism type 1","termid":"MONDO:0018135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"minimal pigment oculocutaneous albinism type 1","secondary_identifiers":["MEDGEN:1842241","ICD9:270.2","SCTID:237919007","UMLS:C5679923","GARD:21529"],"synonyms":[{"name":"MP OCA type 1","type":"exact"},{"name":"OCA1-MP","type":"exact"}],"termid":"MONDO:0018136","xrefs":{"Monarch":{"xref_id":"0018136"}}}


id: GO:0098562
data:
  {"annotated_genes":["SJAG_02102","SJAG_03464","SJAG_02605","SJAG_03311","SJAG_01774","SJAG_05207","SJAG_05268","SJAG_00948","SJAG_00368","SJAG_00747","SJAG_01114","SJAG_02444","SJAG_04821","SJAG_01307","SJAG_01134","SJAG_02233","SJAG_04666","SJAG_01738","SJAG_01312","SJAG_02392","SJAG_04732","SJAG_01242","SJAG_00605","SJAG_02587","SJAG_04509","SJAG_03596","SJAG_02196","SJAG_04018","SJAG_04583","SJAG_03345","SJAG_04077","SJAG_03056","SJAG_02989","SJAG_03081","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99003,95412,110155,76413,117035,94236,98664,106161,102616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[90914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[106124,100847,102821,99581,106903,105133,89593,104781,116070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[80110,90067,76642,99301,111174,78597,92748,88225,107356,71116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[96175,106905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[110849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[75660,74638,80725,106813],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The side of a membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00747":null,"SJAG_00948":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01307":null,"SJAG_01312":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02102":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03056":null,"SJAG_03081":null,"SJAG_03311":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04732":null,"SJAG_04821":null,"SJAG_05207":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098562","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098554":null,"GO:0106186":null}}


id: PBO:0051666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein","termid":"PBO:0051666"}


id: PBO:0058225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4515","termid":"PBO:0058225"}


id: GO:0060357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of leucine import. Leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of L-leucine import (obsolete GO:0060357)","synonyms":[{"name":"regulation of L-leucine import","type":"narrow"},{"name":"regulation of L-leucine uptake","type":"narrow"},{"name":"regulation of leucine import","type":"broad"},{"name":"regulation of leucine uptake","type":"exact"}],"termid":"GO:0060357"}


id: PR:O59855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.13","synonyms":[{"name":"Spom972h-ssa2","type":"exact"}],"termid":"PR:O59855"}


id: MOD:01791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal phosphohistidine residue to phosphohistidine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:17690871","PubMed:20847263"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"phosphorylated L-histidine","termid":"MOD:00890"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine immonium ion","synonyms":[{"name":"2-(1H-imidazolyl)ethaniminium","type":"exact"}],"termid":"MOD:01791"}


id: GO:0036004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GAF protein domain.","definition_xrefs":["GOC:yaf","InterPro:IPR003018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"GAF domain binding","termid":"GO:0036004"}


id: FYPO:0006400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the frequency of DNA replication initiation is higher than normal at inefficient origins, i.e. replication origins that normally rarely fire.","definition_xrefs":["PomBase:mah","PMID:28903048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"increased mitotic DNA replication initiation from inefficient origin","synonyms":[{"name":"increased DNA replication initiation from inefficient origin during mitotic cell cycle","type":"exact"},{"name":"increased DNA replication initiation from inefficient origin during vegetative growth","type":"exact"},{"name":"increased firing of inefficient replication origins","type":"exact"},{"name":"increased mitotic DNA replication initiation at inefficient origin","type":"exact"},{"name":"increased mitotic DNA replication initiation from inefficient replication origin","type":"related"}],"termid":"FYPO:0006400"}


id: PBO:0027079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane","termid":"PBO:0027079"}


id: PBO:0031523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031523"}


id: MONDO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the brain and the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomyelitis","secondary_identifiers":["SCTID:62950007","UMLS:C0014070","NCIT:C34580","MEDGEN:8603","EFO:0001423","DOID:640","ICD9:323.9","MESH:D004679"],"synonyms":[{"name":"central nervous system inflammation","type":"exact"},{"name":"encephalitis &/or myelitis","type":"exact"},{"name":"encephalitis and/or myelitis","type":"exact"},{"name":"inflammation of central nervous system","type":"exact"}],"termid":"MONDO:0005156","xrefs":{"Monarch":{"xref_id":"0005156"}}}


