# terms

id: GO:0060625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein deneddylation, the removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein deneddylation","termid":"GO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein deneddylation","secondary_identifiers":["GO:0060626"],"synonyms":[{"name":"regulation of cullin deneddylation","type":"narrow"}],"termid":"GO:0060625"}


id: PBO:0087636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the endosomal Vps27p-Hse1p complex; complex is required for sorting of ubiquitinated membrane proteins into intralumenal vesicles prior to vacuolar degradation, as well as for recycling of Golgi proteins and formation of lumenal membranes","termid":"PBO:0087636"}


id: PR:Q9Y7X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.11 gene.","definition_xrefs":["UniProtKB:Q9Y7X7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain-containing protein C365.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.11","synonyms":[{"name":"Spom972h-SPBC365.11","type":"exact"}],"termid":"PR:Q9Y7X7"}


id: GO:0097273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine.","definition_xrefs":["GOC:yaf","PMID:12695560"],"gene_count":0,"genotype_count":0,"name":"obsolete creatinine homeostasis (obsolete GO:0097273)","termid":"GO:0097273"}


id: PBO:0070201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 126 pseudogene","termid":"PBO:0070201"}


id: GO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta intraepithelial T cell differentiation","termid":"GO:0002299"},{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, alpha-beta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002301"}


id: PATO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flexibility","termid":"PATO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flexible","synonyms":[{"name":"bendy","type":"exact"}],"termid":"PATO:0001544"}


id: PBO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.29","termid":"PBO:0000752"}


id: MOD:00110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine methyl disulfide.","definition_xrefs":["Unimod:39#C","OMSSA:179","PubMed:10555576","PubMed:163643","PubMed:2056535","PubMed:6381494","RESID:AA0101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine methyl disulfide","synonyms":[{"name":"(2R)-2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldithio)propanoic acid","type":"exact"},{"name":"2-amino-3-methyldisulfanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-(methyldisulfanediyl)-propanoic acid","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"L-3-(methyldithio)alanine","type":"exact"},{"name":"L-cysteine methyl disulfide","type":"exact"},{"name":"MOD_RES Cysteine methyl disulfide","type":"exact"},{"name":"Methylthio","type":"related"},{"name":"S-methylthio-L-cysteine","type":"exact"},{"name":"S-methylthiocysteine","type":"exact"},{"name":"methyl methanethiolsulfonate derivatized cysteine","type":"exact"},{"name":"methyl methanethiosulfonate derivatized cysteine","type":"exact"},{"name":"mmts","type":"exact"}],"termid":"MOD:00110"}


id: PBO:0057414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o-2","termid":"PBO:0057414"}


id: RO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts at point y if and only if the time point at which x starts is equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_at_point","termid":"RO:0002583"}


id: GO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of histones, including histone dimers, from nucleosomes within chromatin.","definition_xrefs":["PMID:17496903","GOC:krc","PMID:15525516","PMID:21807128"],"gene_count":0,"genotype_count":0,"name":"obsolete histone displacement (obsolete GO:0001207)","termid":"GO:0001207"}


id: PR:Q9P7L3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.10c gene.","definition_xrefs":["UniProtKB:Q9P7L3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.10c","synonyms":[{"name":"2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARIPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAROPP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC21C3.10c","type":"exact"}],"termid":"PR:Q9P7L3"}


id: PBO:0028617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2_snRNP_binding","termid":"PBO:0028617"}


id: GO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["GOC:dph","GOC:ef","ISBN:0878932437","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate development","termid":"GO:0001840"}


id: PBO:0046769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 9","termid":"PBO:0046769"}


id: PBO:0066377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 4","termid":"PBO:0066377"}


id: PBO:0057431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-1","termid":"PBO:0057431"}


id: PBO:0048844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-6-phosphate deaminase 2","termid":"PBO:0048844"}


id: PBO:0036551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0036551"}


id: MONDO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic muscle wasting","secondary_identifiers":["ICD9:618.83","DOID:11629","MEDGEN:1843467","UMLS:C1456255","ICD10CM:N81.84"],"termid":"MONDO:0001327","xrefs":{"Monarch":{"xref_id":"0001327"}}}


id: MONDO:0014239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular anomalies with or without congenital heart disease","secondary_identifiers":["GARD:18360","MEDGEN:816188","UMLS:C3809858","OMIM:615542"],"synonyms":[{"name":"TACHD","type":"related"},{"name":"testicular anomalies with or without congenital heart disease","type":"exact"}],"termid":"MONDO:0014239","xrefs":{"Monarch":{"xref_id":"0014239"}}}


id: SO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_intron","synonyms":[{"name":"5' intron","type":"exact"},{"name":"5' intron sequence","type":"exact"},{"name":"five prime intron","type":"exact"}],"termid":"SO:0000190"}


id: PR:O74778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- btb2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.06c","synonyms":[{"name":"Spom972h-btb2","type":"exact"}],"termid":"PR:O74778"}


id: MONDO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by episodes that are preceded by focal neurological symptoms originating in the brainstem.","definition_xrefs":["NCIT:C117013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with aura","termid":"MONDO:0005475"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with brainstem aura","secondary_identifiers":["icd11.foundation:2022157084","UMLS:C0270860","MEDGEN:82857","SCTID:83351003","GARD:5896"],"synonyms":[{"name":"Bickerstaff migraine","type":"related"},{"name":"MBA","type":"related"},{"name":"basilar artery migraine","type":"related"},{"name":"basilar artery migraine with aura","type":"exact"},{"name":"basilar migraine","type":"exact"},{"name":"basilar-type migraine","type":"exact"},{"name":"bickerstaff's migraine","type":"related"},{"name":"brainstem migraine","type":"related"},{"name":"vertebrobasilar migraine","type":"related"}],"termid":"MONDO:0043219","xrefs":{"Monarch":{"xref_id":"0043219"}}}


id: MONDO:0024650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteoporosis","termid":"MONDO:0005298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"drug-induced osteoporosis","secondary_identifiers":["MEDGEN:538336","SCTID:14651005","icd11.foundation:691296096","UMLS:C0264115","ICD9:733.09"],"synonyms":[{"name":"drug-induced osteoporosis","type":"exact"}],"termid":"MONDO:0024650","xrefs":{"Monarch":{"xref_id":"0024650"}}}


id: MONDO:0014683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A9","secondary_identifiers":["DOID:0111232","OMIM:616538","UMLS:C4225291","MEDGEN:902513","GARD:16134"],"synonyms":[{"name":"MDDGA9","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye brain disease, Dag1-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 9","type":"related"}],"termid":"MONDO:0014683","xrefs":{"Monarch":{"xref_id":"0014683"}}}


id: GO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoteichoic acid.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipoteichoic acid binding","termid":"GO:0070891"}


id: PBO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 3","termid":"PBO:0070446"}


id: MONDO:0025271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection in cattle caused by various species of trypanosomes.","definition_xrefs":["MESH:D014354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"trypanosomiasis, non-human animal","termid":"MONDO:0700213"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trypanosomiasis, bovine","synonyms":[{"name":"Trypanosomiases, bovine","type":"related"},{"name":"bovine Trypanosomiases","type":"related"},{"name":"bovine trypanosomiasis","type":"related"}],"termid":"MONDO:0025271","xrefs":{"Monarch":{"xref_id":"0025271"}}}


id: MONDO:0010436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic X-linked intellectual disability Lubs type","termid":"MONDO:0010283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome Xq28 duplication syndrome","secondary_identifiers":["MESH:C567580","GARD:15266","MEDGEN:411727","UMLS:C2749007","OMIM:300815"],"synonyms":[{"name":"chromosome Xq28 duplication syndrome","type":"exact"}],"termid":"MONDO:0010436","xrefs":{"Monarch":{"xref_id":"0010436"}}}


id: PBO:0041486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C11orf98 pseudogene 1","termid":"PBO:0041486"}


id: PBO:0070759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 15","termid":"PBO:0070759"}


id: MONDO:0017445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiria","secondary_identifiers":["Orphanet:294983","UMLS:C0265594","SCTID:371199008","MEDGEN:488815","GARD:21196","icd11.foundation:1428065029"],"synonyms":[{"name":"congenital absence of hand","type":"exact"}],"termid":"MONDO:0017445","xrefs":{"Monarch":{"xref_id":"0017445"}}}


id: PBO:0052833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-3","termid":"PBO:0052833"}


id: PBO:0039611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR like pseudogene 1","termid":"PBO:0039611"}


id: GO:0070964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of bacterium","termid":"GO:0070962"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of gram-positive bacterium","synonyms":[{"name":"activation of neutrophil mediated killing of gram-positive bacterium","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of gram-positive bacterium","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"upregulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"}],"termid":"GO:0070964"}


id: PBO:0077158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 1, transcriptional corepressor","termid":"PBO:0077158"}


id: GO:0060908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the number of copies of extrachromosomal plasmid DNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid maintenance","termid":"GO:0006276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid copy number maintenance","termid":"GO:0060908"}


id: PBO:0055457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2889","termid":"PBO:0055457"}


id: MONDO:0010445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete McLeod syndrome (obsolete MONDO:0010445)","termid":"MONDO:0010445","xrefs":{"Monarch":{"xref_id":"0010445"}}}


id: GO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of locomotion","synonyms":[{"name":"activation of locomotion","type":"narrow"},{"name":"stimulation of locomotion","type":"narrow"},{"name":"up regulation of locomotion","type":"exact"},{"name":"up-regulation of locomotion","type":"exact"},{"name":"upregulation of locomotion","type":"exact"}],"termid":"GO:0040017"}


id: MONDO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that is composed of squamous epithelial cells. Squamous cell carcinoma is a representative example.","definition_xrefs":["NCIT:C3792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell neoplasm","secondary_identifiers":["DOID:3168","MESH:D018307","UMLS:C0206720","MEDGEN:60219"],"synonyms":[{"name":"epidermoid cell neoplasm","type":"exact"},{"name":"epidermoid cell tumor","type":"exact"},{"name":"epidermoid cell tumour","type":"exact"},{"name":"squamous cell neoplasm","type":"exact"},{"name":"squamous cell tumor","type":"exact"},{"name":"squamous cell tumor (qualifier value)","type":"exact"},{"name":"squamous cell tumour","type":"exact"},{"name":"squamous cell tumour (qualifier value)","type":"exact"}],"termid":"MONDO:0002532","xrefs":{"Monarch":{"xref_id":"0002532"}}}


id: PBO:0072413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 18","termid":"PBO:0072413"}


id: PBO:0046691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETHE1 persulfide dioxygenase","termid":"PBO:0046691"}


id: GO:0035232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a germ cell from their site of production to the gonad, through the attraction of cells towards their target.","definition_xrefs":["PMID:12885551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"germ cell migration","termid":"GO:0008354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell attraction","termid":"GO:0035232"}


id: MONDO:0014844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the SYCE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 12","secondary_identifiers":["MEDGEN:934749","UMLS:C4310782","OMIM:616947"],"synonyms":[{"name":"POF12","type":"exact"},{"name":"SYCE1 primary ovarian failure","type":"exact"},{"name":"premature ovarian failure 12","type":"exact"},{"name":"premature ovarian failure 12; POF12","type":"exact"},{"name":"premature ovarian failure type 12","type":"exact"},{"name":"primary ovarian failure caused by mutation in SYCE1","type":"exact"}],"termid":"MONDO:0014844","xrefs":{"Monarch":{"xref_id":"0014844"}}}


id: PBO:0079475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinkle mtDNA helicase","termid":"PBO:0079475"}


id: GO:0030053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any member of a family of receptors that includes the major FK506 binding protein FKBP and cyclophilin. These two proteins are unrelated in amino-acid sequence, but both possess peptidyl-prolyl isomerase activity which is blocked by immunosuppressants that block signal-transduction pathways leading to T cell activation such as FK506 and rapamycin, which block FKBP, or cyclosporin A, which blocks cyclophilin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete immunophilin (obsolete GO:0030053)","synonyms":[{"name":"immunophilin","type":"exact"}],"termid":"GO:0030053"}


id: PBO:0084411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m(7)GpppX pyrophosphatase regulator; non-essential, stress induced regulatory protein; modulates m7G-oligoribonucleotide metabolism; inhibits Dcs1p; regulated by Msn2p, Msn4p, and the Ras-cAMP-cAPK signaling pathway; mutant has increased aneuploidy tolerance; DCS2 has a paralog, DCS1, that arose from the whole genome duplication","termid":"PBO:0084411"}


id: PBO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs Four Homologue","termid":"PBO:0000213"}


id: GO:0006884
data:
  {"annotated_genes":["SJAG_02532","SJAG_02019","SJAG_03401","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73820,96013,114229],"is_not":false,"summary":null,"term":"GO:0006884"},{"annotations":[92742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"}]},"cv_name":"biological_process","definition":"Any process involved in maintaining the steady state of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"},{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_03401":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell volume homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell volume","type":"exact"}],"termid":"GO:0006884","terms_by_termid":{"GO:0006884":null,"GO:0009992":null}}


id: PBO:0031567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_binding_phenotype","termid":"PBO:0031567"}


id: MONDO:0017582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma with poor prognosis, arising from the adenohypophysial cells of the anterior lobe of the pituitary gland or pre-existing adenomas. The majority are hormonally functioning neoplasms, usually producing prolactin or ACTH. The diagnosis is based on the presence of metastases. Syndromes associated with pituitary gland carcinomas include hyperprolactinemia, Cushing disease, and acromegaly.","definition_xrefs":["NCIT:C4536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pituitary adenocarcinoma","secondary_identifiers":["DOID:4916","HP:0011763","GARD:9371","ICDO:8272/3","ONCOTREE:PTCA","SCTID:254955001","UMLS:C0346300","MEDGEN:91096","Orphanet:300385"],"synonyms":[{"name":"PTCA","type":"related"},{"name":"cancer of pituitary","type":"broad"},{"name":"cancer of pituitary gland","type":"broad"},{"name":"cancer of the pituitary","type":"broad"},{"name":"cancer of the pituitary gland","type":"broad"},{"name":"carcinoma of pituitary","type":"exact"},{"name":"carcinoma of pituitary gland","type":"exact"},{"name":"carcinoma of the pituitary","type":"exact"},{"name":"carcinoma of the pituitary gland","type":"exact"},{"name":"pituitary adenocarcinoma (disease)","type":"exact"},{"name":"pituitary carcinoma","type":"exact"},{"name":"pituitary gland adenocarcinoma","type":"exact"},{"name":"pituitary gland cancer","type":"broad"},{"name":"pituitary gland carcinoma","type":"exact"}],"termid":"MONDO:0017582","xrefs":{"Monarch":{"xref_id":"0017582"}}}


id: PBO:0005471
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localizes to double-strand breaks","termid":"PBO:0005471"}


id: MONDO:1011345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poisoning, non-human animal","termid":"MONDO:1011345","xrefs":{"Monarch":{"xref_id":"1011345"}}}


id: MONDO:0014173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the PHC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 11, primary, autosomal recessive","secondary_identifiers":["UMLS:C3809431","DOID:0070287","MEDGEN:815761","OMIM:615414"],"synonyms":[{"name":"MCPH11","type":"related"},{"name":"PHC1 autosomal recessive primary microcephaly","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in PHC1","type":"exact"},{"name":"microcephaly 11, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014173","xrefs":{"Monarch":{"xref_id":"0014173"}}}


id: PBO:0083667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum packaging chaperone; required for incorporation of amino acid permeases into COPII coated vesicles for transport to the cell surface","termid":"PBO:0083667"}


id: PBO:0064523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit D","termid":"PBO:0064523"}


id: PBO:0004194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, PAN complex subunit, Ppk26","termid":"PBO:0004194"}


id: RO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l ","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_along","termid":"RO:0002341"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: PBO:0070217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 149 pseudogene","termid":"PBO:0070217"}


id: MOD:01284
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:10825247","PubMed:15541752","Unimod:206#C","PubMed:9254591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"acrolein addition +56 - site C","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01284"}


id: GO:0033634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion mediated by integrin","termid":"GO:0033630"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033634"}


id: PATO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's processual parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extra or missing processual parts","termid":"PATO:0001564"}


id: PBO:0065542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotriesterase related","termid":"PBO:0065542"}


id: GO:0031043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 7 O-glycan structure, GalNAc-alpha-(1->6)-GalNAc.","definition_xrefs":["GOC:mah","GOC:pr","PMID:10580130"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 7 (obsolete GO:0031043)","termid":"GO:0031043"}


id: GO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions that takes place outside the cell that occur as a result of by-products of tissue damage, including collagen, cartilage, and basement membrane. The ultimate product of the kinin cascade include kallidin and bradykinin, agents known to induce smooth muscle contraction, vasoconstriction, and increased vascular permeability.","definition_xrefs":["PMID:11842287","GOC:jal","ISBN:0721601871","PMID:14501145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"},{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"kinin cascade","termid":"GO:0002254"}


id: PBO:0057602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 939","termid":"PBO:0057602"}


id: GO:0035502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of the portion of the ureteric bud tube that contributes to the morphogenesis of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric part of ureteric bud development","termid":"GO:0035502"}


id: GO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A extracellular matrix complex involved in cell adhesion and cell migration. Typically homotrimeric or homohexameric. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.","definition_xrefs":["GOC:bhm","PMID:23658023","PMID:17909022","PMID:11731446","PMID:12845616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tenascin complex","synonyms":[{"name":"Tenascin-C","type":"narrow"},{"name":"Tenascin-N","type":"narrow"},{"name":"Tenascin-R","type":"narrow"},{"name":"Tenascin-W","type":"narrow"},{"name":"Tenascin-X","type":"narrow"}],"termid":"GO:0090733"}


id: MONDO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylitis","termid":"MONDO:0003937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory spondylopathy","secondary_identifiers":["DOID:12105","ICD9:720.89","SCTID:202649003","MEDGEN:215416","UMLS:C0949690","ICD9:720.81","ICD9:720.9"],"synonyms":[{"name":"inflammatory spondylopathies in disease EC","type":"exact"},{"name":"inflammatory spondylopathies in disease classified elsewhere","type":"narrow"},{"name":"inflammatory spondylopathy in disease classified elsewhere","type":"narrow"}],"termid":"MONDO:0001434","xrefs":{"Monarch":{"xref_id":"0001434"}}}


id: PBO:0028368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GT_microsatellite_DNA_binding","termid":"PBO:0028368"}


id: PBO:0090671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S23","termid":"PBO:0090671"}


id: PBO:0117469
data:
  {"annotated_genes":["SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"pombase_family_or_domain":[{"annotations":[56275],"is_not":false,"summary":null,"term":"PBO:0117469"}]},"cv_name":"pombase_family_or_domain","gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":0,"is_obsolete":false,"name":"warning frameshifted","termid":"PBO:0117469","terms_by_termid":{"PBO:0117469":null}}


id: PR:O13733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-terminal kinase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01548","PRO:DNx","PANTHER:PTHR12984:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.13","secondary_identifiers":["UniProtKB:O13733"],"synonyms":[{"name":"Spom972h-SCYL1","type":"exact"}],"termid":"PR:O13733"}


id: PBO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport_during_vegetative_growth","termid":"PBO:0031614"}


id: MOD:01544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01544"}


id: GO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of epidermal growth factor-activated receptor activity","synonyms":[{"name":"regulation of EGF receptor activity","type":"exact"},{"name":"regulation of EGFR activity","type":"exact"},{"name":"regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007176"}


id: GO:1902188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.","definition_xrefs":["GOC:TermGenie","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of viral release from host cell (obsolete GO:1902188)","synonyms":[{"name":"activation of release of virus from host","type":"exact"},{"name":"activation of viral exit","type":"exact"},{"name":"activation of viral release","type":"exact"},{"name":"activation of viral release from host cell","type":"narrow"},{"name":"activation of viral shedding","type":"exact"},{"name":"positive regulation of release of virus from host","type":"exact"},{"name":"positive regulation of viral exit","type":"exact"},{"name":"positive regulation of viral release","type":"exact"},{"name":"positive regulation of viral shedding","type":"exact"},{"name":"up regulation of release of virus from host","type":"exact"},{"name":"up regulation of viral exit","type":"exact"},{"name":"up regulation of viral release","type":"exact"},{"name":"up regulation of viral release from host cell","type":"exact"},{"name":"up regulation of viral shedding","type":"exact"},{"name":"up-regulation of release of virus from host","type":"exact"},{"name":"up-regulation of viral exit","type":"exact"},{"name":"up-regulation of viral release","type":"exact"},{"name":"up-regulation of viral release from host cell","type":"exact"},{"name":"up-regulation of viral shedding","type":"exact"},{"name":"upregulation of release of virus from host","type":"exact"},{"name":"upregulation of viral exit","type":"exact"},{"name":"upregulation of viral release","type":"exact"},{"name":"upregulation of viral release from host cell","type":"exact"},{"name":"upregulation of viral shedding","type":"exact"}],"termid":"GO:1902188"}


id: SO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of loci that can be grouped in a linear order representing the different degrees of linkage among the genes concerned.","definition_xrefs":["ISBN:038752046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linkage_group","secondary_identifiers":["http://en.wikipedia.org/wiki/Linkage_group"],"synonyms":[{"name":"linkage group","type":"exact"}],"termid":"SO:0000018"}


id: PBO:0035722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_processing_during_vegetative_growth","termid":"PBO:0035722"}


id: GO:2000672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of motor neuron apoptotic process","termid":"GO:2000671"},{"relation_name":"negatively_regulates","term_name":"motor neuron apoptotic process","termid":"GO:0097049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of motor neuron apoptotic process","synonyms":[{"name":"negative regulation of motoneuron apoptosis","type":"exact"},{"name":"negative regulation of motor neuron apoptosis","type":"narrow"}],"termid":"GO:2000672"}


id: PBO:0084888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial threonyl-tRNA synthetase; aminoacylates both the canonical threonine tRNA tT(UGU)Q1 and the unusual threonine tRNA tT(UAG)Q2 in vitro; lacks a typical editing domain, but has pre-transfer editing activity stimulated by the unusual tRNA-Thr","termid":"PBO:0084888"}


id: GO:0140529
data:
  {"annotated_genes":["SJAG_04879","SJAG_02908","SJAG_01823","SJAG_02667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107662,110250,113872,115707],"is_not":false,"summary":null,"term":"GO:0140529"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the CMG complex, a protein complex that contains the GINS complex, Cdc45p, and the heterohexameric MCM complex, and that is involved in unwinding DNA during replication. The process begins when additional proteins (e.g. Cdc45 and Sld3) join the loaded, inactive double MCM hexamer at replication origins, and ends when Mcm10 triggers the separation of the Mcm2-7 double hexamers, forming two active CMG complexes.","definition_xrefs":["PMID:22718908","PMID:28501329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"part_of","term_name":"nuclear cell cycle DNA replication initiation","termid":"GO:1902315"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01823":null,"SJAG_02667":null,"SJAG_02908":null,"SJAG_04879":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"CMG complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140529","terms_by_termid":{"GO:0140529":null}}


id: PBO:0079502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin like 4B","termid":"PBO:0079502"}


id: PBO:0066982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 285","termid":"PBO:0066982"}


id: PBO:0027602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_secondary_cell_septum_thickness","termid":"PBO:0027602"}


id: GO:2001276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of L-leucine biosynthetic process","synonyms":[{"name":"regulation of L-leucine anabolism","type":"exact"},{"name":"regulation of L-leucine biosynthesis","type":"exact"},{"name":"regulation of L-leucine formation","type":"exact"},{"name":"regulation of L-leucine synthesis","type":"exact"},{"name":"regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001276"}


id: MONDO:0020526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute megakaryoblastic leukemia in down syndrome","secondary_identifiers":["GARD:19697","MEDGEN:1863778","UMLS:C5925108","Orphanet:99887"],"synonyms":[{"name":"DS-AMKL","type":"exact"}],"termid":"MONDO:0020526","xrefs":{"Monarch":{"xref_id":"0020526"}}}


id: PR:O94400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pbr1 gene.","definition_xrefs":["UniProtKB:O94400","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD and RING finger domain-containing protein C126.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.07c","synonyms":[{"name":"Spom972h-pbr1","type":"exact"}],"termid":"PR:O94400"}


id: PBO:0028801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding","termid":"PBO:0028801"}


id: PATO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in an entity by virtue of the bearer's propensity to resist an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility toward","synonyms":[{"name":"susceptibility","type":"exact"}],"termid":"PATO:0001043"}


id: PBO:0083223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified ORF MDM31/YHR194W","termid":"PBO:0083223"}


id: PBO:0040950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 21","termid":"PBO:0040950"}


id: PBO:0038980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylserine hydrolase","termid":"PBO:0038980"}


id: GO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a venous endothelial cell to a lymphatic endothelial cell.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in lymphatic endothelial cell fate commitment (obsolete GO:0060849)","termid":"GO:0060849"}


id: PBO:0044850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131E (pseudogene)","termid":"PBO:0044850"}


id: PBO:0069655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 932, pseudogene","termid":"PBO:0069655"}


id: PBO:0066973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 276","termid":"PBO:0066973"}


id: PBO:0076610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 28","termid":"PBO:0076610"}


id: PBO:0053946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1249","termid":"PBO:0053946"}


id: GO:0160057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a plant endodermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:26415082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant endodermal cell fate specification","termid":"GO:0160057"}


id: GO:0032592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial membrane (obsolete GO:0032592)","synonyms":[{"name":"integral to mitochondrial membrane","type":"narrow"}],"termid":"GO:0032592"}


id: FYPO:0008178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at normal levels (i.e. indistinguishable from wild-type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal centromeric inner repeat transcript level","termid":"FYPO:0008178"}


id: PBO:0046194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELN antisense RNA 1","termid":"PBO:0046194"}


id: MONDO:0011736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cree intellectual disability syndrome","secondary_identifiers":["MEDGEN:335673","OMIM:606851","UMLS:C1847361","MESH:C564654"],"synonyms":[{"name":"Cree intellectual disability syndrome","type":"exact"},{"name":"Cree mental retardation syndrome","type":"exact"}],"termid":"MONDO:0011736","xrefs":{"Monarch":{"xref_id":"0011736"}}}


id: GO:0099050
data:
  {"annotated_genes":["SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100287],"is_not":false,"summary":null,"term":"GO:0099050"}]},"cv_name":"biological_process","definition":"The membrane scission process that is the final step in the formation of a vesicle, leading to separation from its parent membrane. Vesicle scission involves the constriction of a neck-forming protein complex, consisting e.g. of dynamin, around the budded membrane, leading to vesicle closure during its separation from the parent membrane.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fission","termid":"GO:0090148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"vesicle scission","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099050","terms_by_termid":{"GO:0099050":null}}


id: MONDO:0970962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed spinal dysraphism characterized by a myelocystocele at the termination of the spinal cord. It may be an isolated anomaly or be associated with other defects, including sacral agenesis, anorectal and genitourinary anomalies. The conus is not identifiable. The myelocystocele sac may have a significant lipomatous component (terminal lipomyelocystocele).","definition_xrefs":["Orphanet:645337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelocystocele","termid":"MONDO:0017077"},{"relation_name":"is_a","term_name":"saccular spinal dysraphism with a stalk to the dome","termid":"MONDO:0968988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"terminal myelocystocele","secondary_identifiers":["UMLS:C5816718","MEDGEN:1853147"],"termid":"MONDO:0970962","xrefs":{"Monarch":{"xref_id":"0970962"}}}


id: GO:0006799
data:
  {"annotated_genes":["SJAG_03442","SJAG_01080","SJAG_01319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73364,78956,106994],"is_not":false,"summary":null,"term":"GO:0006799"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polyphosphate, the anion or salt of polyphosphoric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphosphate metabolic process","termid":"GO:0006797"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01080":null,"SJAG_01319":null,"SJAG_03442":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyphosphate anabolism","type":"exact"},{"name":"polyphosphate biosynthesis","type":"exact"},{"name":"polyphosphate formation","type":"exact"},{"name":"polyphosphate synthesis","type":"exact"}],"termid":"GO:0006799","terms_by_termid":{"GO:0006799":null}}


id: GO:0036112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving medium-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006629","GO:0055086"],"is_obsolete":false,"name":"medium-chain fatty-acyl-CoA metabolic process","synonyms":[{"name":"medium-chain fatty acyl CoA metabolic process","type":"exact"},{"name":"medium-chain fatty acyl-CoA metabolism","type":"exact"}],"termid":"GO:0036112"}


id: FYPO:0003426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to a pheromone is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to pheromone","synonyms":[{"name":"decreased RNA accumulation during cellular response to pheromone","type":"related"},{"name":"decreased transcript level during cellular response to pheromone","type":"exact"},{"name":"reduced RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0003426"}


id: PBO:0060043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 31","termid":"PBO:0060043"}


id: MONDO:0008066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal hyperpigmentation, familial transverse","secondary_identifiers":["UMLS:C1834369","MEDGEN:331727","OMIM:161530"],"synonyms":[{"name":"nasal hyperpigmentation, familial transverse","type":"exact"}],"termid":"MONDO:0008066","xrefs":{"Monarch":{"xref_id":"0008066"}}}


id: GO:2000058
data:
  {"annotated_genes":["SJAG_03699","SJAG_00071","SJAG_01210","SJAG_03048","SJAG_00052","SJAG_00475","SJAG_00642","SJAG_02485","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[77667,107269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[89286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[117372,106976,102700,112022,109208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[114933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein breakdown","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolism","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein degradation","type":"related"},{"name":"regulation of protein degradation tagging activity","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein breakdown","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein degradation","type":"exact"},{"name":"regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism","type":"exact"}],"termid":"GO:2000058","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: GO:0046969
data:
  {"annotated_genes":["SJAG_04186","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104513,114727],"is_not":false,"summary":null,"term":"GO:0046969"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + NAD+ + H2O = histone H3 L-lysine (position 9) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K9 to NAD, producing nicotinamide.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0033558","GO:0019213","GO:0016746","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone H3K9 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9604829"],"synonyms":[{"name":"NAD-dependent H3-K9 histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K9 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0046969","terms_by_termid":{"GO:0046969":null}}


id: PR:P87123
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00578","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.07","secondary_identifiers":["UniProtKB:P87123"],"synonyms":[{"name":"DNA-directed RNA polymerase II 14.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-Polr2j","type":"exact"}],"termid":"PR:P87123"}


id: MONDO:0008632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aquagenic urticaria is a rare condition in which urticaria (hives) develop rapidly after the skin comes in contact with water, regardless of its temperature. It most commonly affects women and symptoms often start around the onset of puberty. Some patients report itching too. It is a form of physical urticaria . The exact underlying cause of aquagenic urticaria is currently unknown. Due to the rarity of the condition, there is very limited data regarding the effectiveness of individual treatments; however, various medications and therapies have been used with variable success.","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"urticaria, aquagenic","secondary_identifiers":["UMLS:C0263334","MESH:C562481","ICD9:708.8","SCTID:89870006","MEDGEN:82663","OMIM:191850"],"synonyms":[{"name":"Physical urticaria","type":"exact"},{"name":"aquagenic urticaria","type":"related"},{"name":"urticaria, aquagenic","type":"exact"}],"termid":"MONDO:0008632","xrefs":{"Monarch":{"xref_id":"0008632"}}}


id: GO:1900572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diorcinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"diorcinol metabolic process","termid":"GO:1900570"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diorcinol biosynthetic process","synonyms":[{"name":"diorcinol anabolism","type":"exact"},{"name":"diorcinol biosynthesis","type":"exact"},{"name":"diorcinol formation","type":"exact"},{"name":"diorcinol synthesis","type":"exact"}],"termid":"GO:1900572"}


id: PBO:0029914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_GGPP_level","termid":"PBO:0029914"}


id: PBO:0079182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 11, pseudogene","termid":"PBO:0079182"}


id: PBO:0077999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 3","termid":"PBO:0077999"}


id: PBO:0051557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 10 receptor subunit beta","termid":"PBO:0051557"}


id: MONDO:0008777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gelatinous drop-like corneal dystrophy (GDCD) is a form of superficial corneal dystrophy characterized by multiple prominent milky-white gelatinous nodules beneath the corneal epithelium, and marked visual impairment.","definition_xrefs":["Orphanet:98957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial and subepithelial corneal dystrophy","termid":"MONDO:0000763"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"lattice corneal dystrophy","termid":"MONDO:0004686"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"gelatinous drop-like corneal dystrophy","secondary_identifiers":["MESH:C535480","DOID:0060449","GARD:9647","icd11.foundation:1062815669","MEDGEN:90939","NCIT:C142805","OMIM:204870","UMLS:C0339273","NANDO:1201006"],"synonyms":[{"name":"CDGDL","type":"related"},{"name":"Cdgdl","type":"related"},{"name":"GDCD","type":"exact"},{"name":"GDLD","type":"related"},{"name":"amyloid corneal dystrophy, Japanese type","type":"related"},{"name":"amyloidosis corneal","type":"related"},{"name":"amyloidosis, corneal","type":"related"},{"name":"corneal amyloidosis","type":"exact"},{"name":"corneal dystrophy, gelatinous drop-like","type":"related"},{"name":"corneal dystrophy, lattice type 3","type":"related"},{"name":"gelatinous drop-like corneal dystrophy","type":"exact"},{"name":"lattice corneal dystrophy type 3","type":"related"},{"name":"lattice corneal dystrophy, type 3","type":"related"},{"name":"primary familial amyloidosis of the cornea","type":"exact"},{"name":"subepithelial amyloidosis of the cornea","type":"exact"}],"termid":"MONDO:0008777","xrefs":{"Monarch":{"xref_id":"0008777"}}}


id: MONDO:0800108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cleft leaflet of tricuspid valve","secondary_identifiers":["MEDGEN:576470","SCTID:60232001","UMLS:C0344747"],"synonyms":[{"name":"cleft tricuspid valve","type":"exact"}],"termid":"MONDO:0800108","xrefs":{"Monarch":{"xref_id":"0800108"}}}


id: PBO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_MCB_promoter","termid":"PBO:0032728"}


id: PBO:0068347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 123","termid":"PBO:0068347"}


id: MONDO:0000412
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012245"}]},"cv_name":"mondo","definition":"An electroclinical syndrome with onset in the neonatal period less than 44 weeks of gestational age.","definition_xrefs":["DOID:0050702","PMID:20196795","PMID:22182677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"neonatal period electroclinical syndrome","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0000412","terms_by_termid":{"MONDO:0012245":null},"xrefs":{"Monarch":{"xref_id":"0000412"}}}


id: GO:0031841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuropeptide Y receptor binding","synonyms":[{"name":"NPY receptor binding","type":"exact"},{"name":"neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031841"}


id: PBO:0089238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP6 subunit Alp16","termid":"PBO:0089238"}


id: SO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence surrounding a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_flanking_region","synonyms":[{"name":"transposable element flanking region","type":"exact"}],"termid":"SO:0000364"}


id: PBO:0081640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 567","termid":"PBO:0081640"}


id: PBO:0088087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose-4-epimerase; catalyzes interconversion of UDP-galactose and UDP-D-glucose in galactose metabolism; also catalyzes conversion of alpha-D-glucose or alpha-D-galactose to their beta-anomers; human homolog GALE implicated in galactosemia, can complement yeast null mutant","termid":"PBO:0088087"}


id: PBO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.15","termid":"PBO:0002072"}


id: GO:0141049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionylated protein (PSSG) + glutathione (GSH) = protein-thiol (PSH) + glutathione disulfide (GSSG). The reaction may proceed via a 'monothiol' or 'dithiol' mechanism.","definition_xrefs":["PMID:36771108","PMID:23397885","PMID:33932870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674","GO:0015036","GO:0140096"],"is_obsolete":false,"name":"protein-glutathione oxidoreductase (glutathione) activity","synonyms":[{"name":"glutaredoxin activity","type":"broad"},{"name":"glutathione oxidoreductase activity","type":"broad"}],"termid":"GO:0141049"}


id: PBO:0012225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin","termid":"PBO:0012225"}


id: PBO:0077766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 2","termid":"PBO:0077766"}


id: PBO:0043747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 1","termid":"PBO:0043747"}


id: GO:0009832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellulose and pectin-containing cell wall. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"is_a","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall biogenesis","synonyms":[{"name":"cell wall anabolism","type":"broad"},{"name":"cell wall assembly","type":"broad"},{"name":"cell wall biosynthetic process","type":"broad"},{"name":"cell wall formation","type":"broad"},{"name":"cell wall synthesis","type":"broad"},{"name":"cellulose and pectin-containing cell wall biogenesis","type":"exact"}],"termid":"GO:0009832"}


id: PBO:0062351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily M member 2 pseudogene","termid":"PBO:0062351"}


id: PR:O74385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.10","synonyms":[{"name":"Spom972h-elp6","type":"exact"}],"termid":"PR:O74385"}


id: GO:1902768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprenoid via 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GO_REF:0000092","GOC:mengo_curators","GOC:TermGenie","PMID:23746261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isoprenoid biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","synonyms":[{"name":"isoprenoid anabolism via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid biosynthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid formation via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid synthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"}],"termid":"GO:1902768"}


id: MONDO:0005327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the hip in which the continuity of either the femoral head, femoral neck, intertrochanteric or subtrochanteric regions is broken. Symptoms include pain in the hip or groin, bruising and swelling in and around the hip area. The injured hip is turned outward and the leg appears shorter on that side.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hip fracture","secondary_identifiers":["EFO:0003964","MESH:D006620","SCTID:263225007"],"termid":"MONDO:0005327","xrefs":{"Monarch":{"xref_id":"0005327"}}}


id: PBO:0089436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor Def1","termid":"PBO:0089436"}


id: MONDO:0006552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the hair follicles. Causes include excessive perspiration, skin infections, and skin wounds.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"folliculitis","secondary_identifiers":["SCTID:13600006","EFO:1000702","DOID:4409","MEDGEN:4752","ICD9:704.8","NCIT:C94408","MESH:D005499","UMLS:C0016436","Wikipedia:Folliculitis"],"synonyms":[{"name":"dermatitis of hair follicle","type":"exact"},{"name":"hair follicle dermatitis","type":"exact"}],"termid":"MONDO:0006552","xrefs":{"Monarch":{"xref_id":"0006552"}}}


id: SO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region composed of 8-11bp which enables binding by the centromere binding factor 1(Cbf1p).","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_I","synonyms":[{"name":"CDEI","type":"exact"},{"name":"Centromere DNA Element I","type":"exact"}],"termid":"SO:0001493"}


id: GO:0009244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"lipopolysaccharide core region metabolic process","termid":"GO:0046401"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0005975"],"is_obsolete":false,"name":"lipopolysaccharide core region biosynthetic process","synonyms":[{"name":"LPS core region biosynthetic process","type":"exact"},{"name":"lipopolysaccharide core region anabolism","type":"exact"},{"name":"lipopolysaccharide core region biosynthesis","type":"exact"},{"name":"lipopolysaccharide core region formation","type":"exact"},{"name":"lipopolysaccharide core region synthesis","type":"exact"}],"termid":"GO:0009244"}


id: MONDO:1012247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, domestic cat","secondary_identifiers":["OMIA:000881-9685"],"termid":"MONDO:1012247","xrefs":{"Monarch":{"xref_id":"1012247"}}}


id: PBO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 1","termid":"PBO:0050486"}


id: MONDO:0007290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the HSF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 5 multiple types","secondary_identifiers":["MESH:C535342","OMIM:116800","UMLS:C0266537","DOID:0110255","MEDGEN:78608"],"synonyms":[{"name":"CTRCT5","type":"exact"},{"name":"HSF4 cataract (disease)","type":"exact"},{"name":"cataract (disease) caused by mutation in HSF4","type":"exact"},{"name":"cataract 5, multiple types","type":"related"},{"name":"cataract, Marner type","type":"related"},{"name":"cataract, lamellar","type":"related"}],"termid":"MONDO:0007290","xrefs":{"Monarch":{"xref_id":"0007290"}}}


id: PBO:0069410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 670, pseudogene","termid":"PBO:0069410"}


id: GO:0034244
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118236],"is_not":false,"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090041"],"synonyms":[{"name":"negative regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034244","terms_by_termid":{"GO:0034244":null}}


id: PBO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Srw1","termid":"PBO:0002630"}


id: GO:0018675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + O2 + reduced [NADPH--hemoprotein reductase] = (1S,5R)-carveol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:17945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-limonene 6-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0713","EC:1.14.14.51","MetaCyc:--LIMONENE-6-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(-)-limonene 6-hydroxylase activity","type":"related"},{"name":"(-)-limonene 6-monooxygenase activity","type":"exact"},{"name":"(-)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating) activity","type":"related"},{"name":"(S)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"limonene 6-hydroxylase activity","type":"exact"}],"termid":"GO:0018675"}


id: GO:0090123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.","definition_xrefs":["GOC:ascb_2009","GOC:tb","PMID:29367433","GOC:dph","GOC:krc","PMID:22809326","PMID:10521503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lysosomal glycocalyx","termid":"GO:0090123"}


id: GO:0072579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which glycine receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:mah","PMID:20843816","GOC:pr","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glycine receptor clustering","termid":"GO:0072579"}


id: GO:0016054
data:
  {"annotated_genes":["SJAG_03293","SJAG_00281","SJAG_00714","SJAG_00706","SJAG_01432","SJAG_04145","SJAG_02235","SJAG_03312","SJAG_02496","SJAG_00944","SJAG_02901","SJAG_03398","SJAG_00495","SJAG_04827","SJAG_03641","SJAG_03743","SJAG_00937","SJAG_02450","SJAG_00674","SJAG_04570","SJAG_03434","SJAG_04842","SJAG_02734","SJAG_03804","SJAG_02763","SJAG_03861","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[113512,78650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[77021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009074"},{"annotations":[71535,71898,74233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[112120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[71277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[80740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[79300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[73613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[71631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[87784,88762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[80017,92045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[74550,78320,96739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[105412,101350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[68908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[114067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[78376,70618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[72345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[73443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of organic acids, any acidic compound containing carbon in covalent linkage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_00495":null,"SJAG_00674":null,"SJAG_00706":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01432":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02734":null,"SJAG_02763":null,"SJAG_02901":null,"SJAG_03293":null,"SJAG_03312":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03743":null,"SJAG_03804":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04570":null,"SJAG_04827":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"organic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"organic acid breakdown","type":"exact"},{"name":"organic acid catabolism","type":"exact"},{"name":"organic acid degradation","type":"exact"}],"termid":"GO:0016054","terms_by_termid":{"GO:0000949":null,"GO:0001561":null,"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0009062":null,"GO:0009074":null,"GO:0009436":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0019266":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0019547":null,"GO:0036088":null,"GO:0042758":null,"GO:0042853":null,"GO:1903457":null}}


id: PBO:0017784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca1 (predicted)","termid":"PBO:0017784"}


id: GO:2001139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"negatively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid transport","termid":"GO:2001139"}


id: GO:0106076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + lysine in peptide = CoA + N-succinyl-lysine-peptide.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-succinyltransferase activity","termid":"GO:0106075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"peptide-lysine-N-succinyltransferase activity","termid":"GO:0106076"}


id: PBO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_degradation","termid":"PBO:0031681"}


id: MONDO:0021057
data:
  {"annotated_genes":["SJAG_02261","SJAG_01419","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[85590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"An inherited diseases haracterized by the development of adenomas in the rectum and colon; classified into classic FAP and attenuated FAP.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic or attenuated familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"classic or attenuated FAP","type":"exact"},{"name":"classic or attenuated familial adenomatous polyposis","type":"exact"}],"termid":"MONDO:0021057","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021057"}}}


id: GO:0042366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin metabolic process","termid":"GO:0009235"},{"relation_name":"is_a","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766","GO:0033013"],"is_obsolete":false,"name":"cobalamin catabolic process","synonyms":[{"name":"cobalamin breakdown","type":"exact"},{"name":"cobalamin catabolism","type":"exact"},{"name":"cobalamin degradation","type":"exact"},{"name":"vitamin B12 catabolic process","type":"exact"},{"name":"vitamin B12 catabolism","type":"exact"}],"termid":"GO:0042366"}


id: GO:0031262
data:
  {"annotated_genes":["SJAG_02814","SJAG_04076","SJAG_03683","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75348,76086,76159,77524],"is_not":false,"summary":null,"term":"GO:0031262"}]},"cv_name":"cellular_component","definition":"An essential outer kinetochore complex involved in the attachment of microtubule ends to the chromosomes during mitosis.","definition_xrefs":["GOC:vw","PMID:28502666","PMID:34810257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_02814":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0000776","GO:0032991"],"is_obsolete":false,"name":"Ndc80 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Nuf2-Ndc80 complex","type":"exact"}],"termid":"GO:0031262","terms_by_termid":{"GO:0031262":null}}


id: PR:P40902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.13c","synonyms":[{"name":"Spom972h-isp7","type":"exact"}],"termid":"PR:P40902"}


id: MONDO:0023961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visceral neuropathy, familial","secondary_identifiers":["UMLS:C0266834","MEDGEN:540202","OMIMPS:243180"],"termid":"MONDO:0023961","xrefs":{"Monarch":{"xref_id":"0023961"}}}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: PBO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit 3","termid":"PBO:0005633"}


id: GO:0090036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of protein kinase C signaling","synonyms":[{"name":"regulation of protein kinase C signaling cascade","type":"related"},{"name":"regulation of protein kinase C signalling cascade","type":"related"}],"termid":"GO:0090036"}


id: PBO:0091240
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncation LoF variant reverts to normal in strain CBS5557","termid":"PBO:0091240"}


id: GO:0072127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal capsule over time, from its formation to the mature structure. The renal capsule is the tough fibrous layer surrounding the kidney, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage. During development, it comprises a single layer of flattened cells that lie just above the cortical stroma and the condensed mesenchyme of the nephrogenic zone. It is in this region that the early stages of nephron induction and formation of new generations ureteric bud branches occur, as the kidney expands.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule development","termid":"GO:0072127"}


id: PBO:0062536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 1","termid":"PBO:0062536"}


id: GO:0009337
data:
  {"annotated_genes":["SJAG_01693","SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70555,117778],"is_not":false,"summary":null,"term":"GO:0009337"}]},"cv_name":"cellular_component","definition":"A multisubunit iron flavoprotein, which in yeast is composed of 2 alpha and 2 beta subunits. Catalyzes the reduction of sulfite to sulfide.","definition_xrefs":["GOC:jl","PMID:6751400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sulfite reductase complex (NADPH)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sulphite reductase complex (NADPH)","type":"exact"}],"termid":"GO:0009337","terms_by_termid":{"GO:0009337":null}}


id: GO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5A serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 5A serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5A receptor binding","type":"exact"},{"name":"type 5A serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031830"}


id: MONDO:0023197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal dysplasia Klippel feil syndrome","termid":"MONDO:0023197","xrefs":{"Monarch":{"xref_id":"0023197"}}}


id: MONDO:0020762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic-mesencephalic junction dysplasia","termid":"MONDO:0017868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diencephalic-mesencephalic junction dysplasia syndrome 2","secondary_identifiers":["UMLS:C5231440","MEDGEN:1684846","OMIM:618646"],"synonyms":[{"name":"DMJDS2","type":"exact"},{"name":"spastic tetraparesis, dystonia, developmental delay, and structural abnormalities of the basal ganglia","type":"related"}],"termid":"MONDO:0020762","xrefs":{"Monarch":{"xref_id":"0020762"}}}


id: MONDO:0023227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of diabetes insipidus that manifests during pregnancy (or in some cases, after pregnancy). It is characterized by theappearance of a polyuric-polydipsic syndrome that resultsin fluid intake ranging from 3 to 20 L/day. It is also charac-terized by excretion of abnormally high volumes of dilutedurine. This polyuria is insipid, i.e., the urine concentrationof dissolved substances is very low.","definition_xrefs":["PMID:20500966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"gestational diabetes insipidus","secondary_identifiers":["DOID:0081057","UMLS:C2932666","MESH:C548014","MEDGEN:444359"],"synonyms":[{"name":"Gestagenic diabetes insipidus","type":"related"},{"name":"diabetes insipidus gestational","type":"related"}],"termid":"MONDO:0023227","xrefs":{"Monarch":{"xref_id":"0023227"}}}


id: GO:0048163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when antral spaces begin to form in the follicle cells. Mitochondria form centers for yolk concentration.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scattered antral spaces stage","synonyms":[{"name":"mammalian oogenesis stage 6","type":"exact"}],"termid":"GO:0048163"}


id: GO:0005763
data:
  {"annotated_genes":["SJAG_04918","SJAG_04378","SJAG_02452","SJAG_04164","SJAG_03584","SJAG_03053","SJAG_02324","SJAG_01734","SJAG_00782","SJAG_02201","SJAG_00628","SJAG_04753","SJAG_01468","SJAG_04281","SJAG_04494","SJAG_00060","SJAG_02777","SJAG_00944","SJAG_00860","SJAG_02359","SJAG_05320","SJAG_01520","SJAG_02643","SJAG_04788","SJAG_03065","SJAG_04173","SJAG_01767","SJAG_00889","SJAG_00148","SJAG_00105","SJAG_02067","SJAG_00513"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72742,72967,73604,74476,74586,76209,76859,78748,90271,92416,94527,94824,96257,96959,98311,98312,98542,102628,103396,104321,106356,106715,108396,108655,108901,110442,110695,110975,112668,115892,116315,118381],"is_not":false,"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a mitochondrial ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"28S ribosomal subunit, mitochondrial","type":"narrow"},{"name":"mitochondrial ribosomal SSU complex","type":"exact"},{"name":"mitochondrial ribosomal small subunit complex","type":"exact"}],"termid":"GO:0005763","terms_by_termid":{"GO:0005763":null}}


id: GO:0010623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of endogenous cellular processes that result in the death of a cell as part of its development.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death involved in cell development","synonyms":[{"name":"developmental programmed cell death","type":"broad"},{"name":"programmed cell death involved in development","type":"broad"}],"termid":"GO:0010623"}


id: PBO:0073726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 7","termid":"PBO:0073726"}


id: PBO:0067484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 618, pseudogene","termid":"PBO:0067484"}


id: MONDO:0014337
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86978],"is_not":false,"summary":null,"term":"MONDO:0014337"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBB2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:816737","DOID:0090135","OMIM:615763","UMLS:C3810407"],"synonyms":[{"name":"CDCBM5","type":"exact"},{"name":"TUBB2A complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBB2A","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 5","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 5","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 5","type":"related"}],"termid":"MONDO:0014337","terms_by_termid":{"MONDO:0014337":null},"xrefs":{"Monarch":{"xref_id":"0014337"}}}


id: GO:0097535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphoid lineage cell (also called a lymphoid lineage restricted progenitor cell) into the thymus. Lymphoid lineage cells enter and exit the thymus several times as part of this process.","definition_xrefs":["PMID:22342843","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration","termid":"GO:0097534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus","synonyms":[{"name":"lymphoid lineage restricted progenitor cell migration into thymus","type":"exact"}],"termid":"GO:0097535"}


id: PBO:0088174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylose and arabinose reductase; member of the aldo-keto reductase (AKR) family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0088174"}


id: GO:0060142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"}


id: MOD:00573
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15174056","Unimod:353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized lysine biotinylated with biotin hydrazide","synonyms":[{"name":"Lysbiotinhydrazide","type":"related"},{"name":"oxidized Lysine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00573"}


id: FYPO:0002210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that taper at one end to a diameter smaller than the other. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, tapered cells (obsolete FYPO:0002210)","synonyms":[{"name":"inviable microcolony, bottle/skittle cells","type":"exact"},{"name":"inviable microcolony, skittle-shaped cells","type":"exact"},{"name":"inviable microcolony, tapered vegetative cells","type":"exact"}],"termid":"FYPO:0002210"}


id: PBO:0053394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 323","termid":"PBO:0053394"}


id: PBO:0040434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP8A1 divergent transcript","termid":"PBO:0040434"}


id: GO:1903839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","PMID:19575011","GOC:als","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA 3'-UTR binding (obsolete GO:1903839)","synonyms":[{"name":"activation of mRNA 3' UTR binding","type":"narrow"},{"name":"activation of mRNA 3'-UTR binding","type":"narrow"},{"name":"positive regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"upregulation of mRNA 3' UTR binding","type":"exact"},{"name":"upregulation of mRNA 3'-UTR binding","type":"exact"}],"termid":"GO:1903839"}


id: GO:0043007
data:
  {"annotated_genes":["SJAG_04855","SJAG_00247","SJAG_04816","SJAG_01050","SJAG_05237","SJAG_03997","SJAG_05180","SJAG_04671","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70491,96343,99607,101494],"is_not":false,"summary":null,"term":"GO:0043007"},{"annotations":[104744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[103544],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[115327,99688,102596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"}]},"cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of rDNA repeats.","definition_xrefs":["GOC:vw","PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01050":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04855":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of rDNA","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rDNA maintenance","type":"exact"},{"name":"ribosomal DNA maintenance","type":"exact"}],"termid":"GO:0043007","terms_by_termid":{"GO:0031582":null,"GO:0043007":null,"GO:0045458":null,"GO:1902681":null}}


id: PBO:0057303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514b","termid":"PBO:0057303"}


id: MONDO:0700113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplasmataceae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anaplasmataceae infectious disease, non-human animal","termid":"MONDO:0700113","xrefs":{"Monarch":{"xref_id":"0700113"}}}


id: GO:0120012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of sphingolipids between membranes in which a sphingolipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["PMID:20823909","PMID:25797198","GOC:krc","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"intermembrane sphingolipid transfer","termid":"GO:0120012"}


id: PBO:0048763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase","termid":"PBO:0048763"}


id: GO:0160086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a polar microtubule.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to polar microtubule","termid":"GO:0160086"}


id: PBO:0029495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_cell_cycle_phase","termid":"PBO:0029495"}


id: PBO:0042716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal AT-AC splicing factor","termid":"PBO:0042716"}


id: PBO:0017641
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy supressor of RAs","termid":"PBO:0017641"}


id: PBO:0058842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8071-2","termid":"PBO:0058842"}


id: PBO:0081215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 5","termid":"PBO:0081215"}


id: GO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to a pathway restricted SMAD protein. A pathway restricted SMAD protein is an effector protein that acts directly downstream of the transforming growth factor family receptor.","definition_xrefs":["ISBN:3527303782","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete pathway-restricted SMAD protein phosphorylation (obsolete GO:0060389)","synonyms":[{"name":"R-SMAD protein phosphorylation","type":"exact"},{"name":"pathway restricted SMAD protein phosphorylation","type":"exact"},{"name":"receptor regulated SMAD protein phosphorylation","type":"exact"},{"name":"receptor-regulated SMAD protein phosphorylation","type":"exact"}],"termid":"GO:0060389"}


id: MONDO:0011551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive dopa-responsive dystonia (DYT5b) is a very rare neurometabolic disorder characterized by a spectrum of symptoms ranging from those seen in dopa-responsive dystonia (DRD) to progressive infantile encephalopathy.","definition_xrefs":["Orphanet:101150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dopa-responsive dystonia","termid":"MONDO:0016812"},{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"},{"relation_name":"is_a","term_name":"tyrosine hydroxylase deficiency","termid":"MONDO:0100064"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"TH-deficient dopa-responsive dystonia","secondary_identifiers":["GARD:1902","MEDGEN:382128","NORD:1810","SCTID:715827001","OMIM:605407","UMLS:C2673535"],"synonyms":[{"name":"DOPA responsive dystonia, autosomal recessive","type":"related"},{"name":"DYT5b","type":"exact"},{"name":"Dopa-responsive dystonia, autosomal recessive","type":"exact"},{"name":"Parkinsonism, infantile, autosomal recessive","type":"related"},{"name":"Segawa syndrome, autosomal recessive","type":"related"},{"name":"Segawa syndrome, recessive","type":"exact"},{"name":"Tyrosine Hydroxylase Deficiency","type":"exact"},{"name":"autosomal recessive Segawa syndrome","type":"exact"},{"name":"autosomal recessive dopa-responsive dystonia","type":"exact"},{"name":"dopa-responsive dystonia, autosomal recessive","type":"exact"},{"name":"dystonia, DOPA responsive, autosomal recessive","type":"related"},{"name":"dystonia, Dopa-responsive, autosomal recessive","type":"related"},{"name":"tyrosine hydroxylase-deficient dopa-responsive dystonia","type":"exact"}],"termid":"MONDO:0011551","xrefs":{"Monarch":{"xref_id":"0011551"}}}


id: GO:0022818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a sodium ion across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium ion uniporter activity","termid":"GO:0022818"}


id: PBO:0084820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; YBR230W-A has a paralog, COQ8, that arose from the whole genome duplication","termid":"PBO:0084820"}


id: PBO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 2","termid":"PBO:0005865"}


id: PBO:0076540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR adaptor interacting with endolysosomal SLC15A4","termid":"PBO:0076540"}


id: FYPO:0000120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spindle","secondary_identifiers":["FYPO:0000367"],"synonyms":[{"name":"spindle defects","type":"exact"}],"termid":"FYPO:0000120"}


id: GO:0120258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-threonine to form peptidyl-O-acetyl-L-threonine.","definition_xrefs":["PMID:16728640","RESID:AA0423","PMID:22802624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"},{"relation_name":"is_a","term_name":"peptidyl-threonine acetylation","termid":"GO:0120257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine O-acetylation","secondary_identifiers":["RESID:AA0364"],"termid":"GO:0120258"}


id: GO:0061561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trigeminal ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion formation","termid":"GO:0061560"},{"relation_name":"part_of","term_name":"trigeminal ganglion morphogenesis","termid":"GO:0061556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion formation","synonyms":[{"name":"trigeminal ganglia formation","type":"related"}],"termid":"GO:0061561"}


id: GO:0062063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BBSome complex.","definition_xrefs":["PMID:20603001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BBSome binding","termid":"GO:0062063"}


id: PBO:0053861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1134","termid":"PBO:0053861"}


id: GO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein light chain (obsolete GO:0001690)","synonyms":[{"name":"cytoplasmic dynein light chain","type":"exact"}],"termid":"GO:0001690"}


id: MONDO:0011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T-box 24 (obsolete MONDO:0011763)","secondary_identifiers":["OMIM:607044"],"termid":"MONDO:0011763","xrefs":{"Monarch":{"xref_id":"0011763"}}}


id: PBO:0026678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_lead","termid":"PBO:0026678"}


id: MONDO:1012759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in sheep due to a mutation in the ITGB4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, ITGB4-related, sheep","secondary_identifiers":["OMIA:001948-9940"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, ITGB4-related, sheep","type":"exact"}],"termid":"MONDO:1012759","xrefs":{"Monarch":{"xref_id":"1012759"}}}


id: PBO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 7","termid":"PBO:0043680"}


id: PBO:0080345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 109 pseudogene","termid":"PBO:0080345"}


id: PBO:0068207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 514","termid":"PBO:0068207"}


id: MONDO:0022555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beardwell syndrome","secondary_identifiers":["UMLS:C2931581","MEDGEN:419446","MESH:C537665"],"synonyms":[{"name":"familial ankylosing vertebral hyperostosis with tylosis","type":"related"}],"termid":"MONDO:0022555","xrefs":{"Monarch":{"xref_id":"0022555"}}}


id: GO:0160168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=9 symmetry. The T=9 capsid is composed of 12 pentameric and 80 hexameric capsomeres.","definition_xrefs":["PMID:37138077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=9 icosahedral viral capsid","secondary_identifiers":["VZ:5316"],"termid":"GO:0160168"}


id: FYPO:0000711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","termid":"FYPO:0000710"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"decreased cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"decreased mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"decreased mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"decreased nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"reduced cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0000711"}


id: GO:0034772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of two methyl groups to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 dimethylation (obsolete GO:0034772)","synonyms":[{"name":"histone H4 K20 dimethylation","type":"exact"},{"name":"histone lysine H4 K20 dimethylation","type":"exact"}],"termid":"GO:0034772"}


id: MONDO:0100570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A telomere biology disorder typically characterized by increased telomere length due to a pathogenic variant in the ACD gene that may cause familial melanoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"ACD-related telomere biology disorder","termid":"MONDO:0800469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"ACD-related long telomere syndrome","termid":"MONDO:0100570","xrefs":{"Monarch":{"xref_id":"0100570"}}}


id: GO:1905220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of platelet formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of platelet formation","termid":"GO:1905219"},{"relation_name":"negatively_regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet formation","synonyms":[{"name":"down regulation of platelet extrusion","type":"exact"},{"name":"down regulation of platelet formation","type":"exact"},{"name":"down-regulation of platelet extrusion","type":"exact"},{"name":"down-regulation of platelet formation","type":"exact"},{"name":"downregulation of platelet extrusion","type":"exact"},{"name":"downregulation of platelet formation","type":"exact"},{"name":"inhibition of platelet extrusion","type":"narrow"},{"name":"inhibition of platelet formation","type":"narrow"},{"name":"negative regulation of platelet extrusion","type":"exact"}],"termid":"GO:1905220"}


id: MONDO:0006576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe cellulitis of the submaxillary space with secondary involvement of the sublingual and submental space. It usually results from infection in the lower molar area or from a penetrating injury to the mouth floor. (From Dorland, 27th ed)","definition_xrefs":["MESH:D008158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulitis","termid":"MONDO:0005230"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ludwig's angina","secondary_identifiers":["DOID:4558","SCTID:196542004","ICD9:528.3","UMLS:C0024081","MEDGEN:44205","Wikipedia:Ludwig's_angina"],"synonyms":[{"name":"Ludwig angina","type":"exact"},{"name":"cellulitis (disease) of mouth floor","type":"exact"},{"name":"cellulitis of floor of mouth","type":"exact"},{"name":"mouth floor cellulitis (disease)","type":"exact"}],"termid":"MONDO:0006576","xrefs":{"Monarch":{"xref_id":"0006576"}}}


id: GO:0047748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5beta-cholestane-3alpha,7alpha,12alpha-triol + 5 H+ + 3 O2 + 6 reduced [adrenodoxin] = (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + 4 H2O + 6 oxidized [adrenodoxin].","definition_xrefs":["RHEA:34631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholestanetetraol 26-dehydrogenase activity","secondary_identifiers":["EC:1.14.15.15","MetaCyc:RXN-13690"],"synonyms":[{"name":"5beta-cholestane-3alpha,7alpha,12alpha,26-tetraol:NAD+ 26-oxidoreductase activity","type":"exact"},{"name":"5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase activity","type":"exact"},{"name":"TEHC-NAD oxidoreductase activity","type":"exact"},{"name":"cholestanetetrol 26-dehydrogenase activity","type":"exact"}],"termid":"GO:0047748"}


id: FYPO:0005179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV.","definition_xrefs":["PMID:15498101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005179"}


id: PBO:0044519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAAM2 antisense RNA 1","termid":"PBO:0044519"}


id: GO:0062113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an early phagosome.","definition_xrefs":["PMID:18813294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle lumen","termid":"GO:0097013"},{"relation_name":"part_of","term_name":"early phagosome","termid":"GO:0032009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"early phagosome lumen","synonyms":[{"name":"early phagocytic vesicle lumen","type":"exact"}],"termid":"GO:0062113"}


id: MONDO:0007518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edema, familial idiopathic, prepubertal","secondary_identifiers":["MEDGEN:377535","UMLS:C1851847","MESH:C565063","OMIM:129840"],"synonyms":[{"name":"edema, familial idiopathic, prepubertal","type":"exact"}],"termid":"MONDO:0007518","xrefs":{"Monarch":{"xref_id":"0007518"}}}


id: MONDO:0958275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"segmental spinal dysgenesis","secondary_identifiers":["Orphanet:656126","UMLS:C5891176","MEDGEN:1863453"],"termid":"MONDO:0958275","xrefs":{"Monarch":{"xref_id":"0958275"}}}


id: PBO:0084439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL4","termid":"PBO:0084439"}


id: PBO:0072900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR-related CTD associated factor 11","termid":"PBO:0072900"}


id: PBO:0057957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-1","termid":"PBO:0057957"}


id: PBO:0043445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 6","termid":"PBO:0043445"}


id: PBO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.41","termid":"PBO:0004493"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: GO:0150144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["PMID:26936882","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"negatively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD80 production","synonyms":[{"name":"negative regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150144"}


id: PBO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_homology_relationship_with","termid":"PBO:0034140"}


id: PBO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.5.5","termid":"PBO:0005642"}


id: GO:0036146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycotoxin stimulus. A mycotoxin is a toxic chemical substance produced by fungi.","definition_xrefs":["PMID:20548963","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mycotoxin","termid":"GO:0010046"},{"relation_name":"is_a","term_name":"cellular response to toxic substance","termid":"GO:0097237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mycotoxin","termid":"GO:0036146"}


id: PR:Q9P7A1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PITH domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02656","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein P35G2.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.02","secondary_identifiers":["UniProtKB:Q9P7A1"],"synonyms":[{"name":"Spom972h-PITHD1","type":"exact"}],"termid":"PR:Q9P7A1"}


id: PBO:0040454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11B (putative)","termid":"PBO:0040454"}


id: MONDO:0003470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma which shows conspicuous cellularity without a significant increase in mitotic rate. (Adapted from WHO)","definition_xrefs":["NCIT:C4713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular ependymoma","secondary_identifiers":["DOID:5500","NCIT:C4714","UMLS:C1384403","MEDGEN:235137"],"termid":"MONDO:0003470","xrefs":{"Monarch":{"xref_id":"0003470"}}}


id: MONDO:0011192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the USH1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 18A","secondary_identifiers":["OMIM:602092","UMLS:C1865870","DOID:0110473","GARD:22592","MEDGEN:356389","MESH:C566580"],"synonyms":[{"name":"DFNB18A","type":"narrow"},{"name":"USH1C autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in USH1C","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18","type":"narrow"},{"name":"deafness, autosomal recessive 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18a","type":"narrow"},{"name":"deafness, autosomal recessive type 18A","type":"narrow"}],"termid":"MONDO:0011192","xrefs":{"Monarch":{"xref_id":"0011192"}}}


id: GO:0045819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of glycogen metabolic process","termid":"GO:0070875"},{"relation_name":"positively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycogen catabolic process","synonyms":[{"name":"activation of glycogen catabolic process","type":"narrow"},{"name":"positive regulation of glycogen breakdown","type":"exact"},{"name":"positive regulation of glycogen catabolism","type":"exact"},{"name":"positive regulation of glycogen degradation","type":"exact"},{"name":"positive regulation of glycogenolysis","type":"exact"},{"name":"stimulation of glycogen catabolic process","type":"narrow"},{"name":"up regulation of glycogen catabolic process","type":"exact"},{"name":"up-regulation of glycogen catabolic process","type":"exact"},{"name":"upregulation of glycogen catabolic process","type":"exact"}],"termid":"GO:0045819"}


id: GO:0106325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0106325)","termid":"GO:0106325"}


id: PR:Q9C0Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps602 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Z7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.12","synonyms":[{"name":"Spom972h-rps602","type":"exact"}],"termid":"PR:Q9C0Z7"}


id: GO:1905581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein particle clearance.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:BHF","GOC:TermGenie","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle clearance","termid":"GO:0010988"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle clearance","termid":"GO:0034383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle clearance","synonyms":[{"name":"activation of LDL clearance","type":"narrow"},{"name":"activation of low-density lipoprotein particle clearance","type":"narrow"},{"name":"positive regulation of LDL clearance","type":"exact"},{"name":"up regulation of LDL clearance","type":"exact"},{"name":"up regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"up-regulation of LDL clearance","type":"exact"},{"name":"up-regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"upregulation of LDL clearance","type":"exact"},{"name":"upregulation of low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:1905581"}


id: PBO:0043195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2 pseudogene 1","termid":"PBO:0043195"}


id: PBO:0054859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2273","termid":"PBO:0054859"}


id: MONDO:0015130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of chronic primary adrenal insufficiency that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired chronic primary adrenal insufficiency (obsolete MONDO:0015130)","secondary_identifiers":["Orphanet:101963"],"synonyms":[{"name":"acquired chronic primary adrenal insufficiency","type":"exact"}],"termid":"MONDO:0015130","xrefs":{"Monarch":{"xref_id":"0015130"}}}


id: PBO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 11","termid":"PBO:0060575"}


id: GO:0045677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R7cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R7 cell differentiation","synonyms":[{"name":"down regulation of R7 differentiation","type":"exact"},{"name":"down-regulation of R7 differentiation","type":"exact"},{"name":"downregulation of R7 differentiation","type":"exact"},{"name":"inhibition of R7 differentiation","type":"narrow"},{"name":"negative regulation of R7 differentiation","type":"exact"}],"termid":"GO:0045677"}


id: PBO:0076078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereocilin pseudogene 1","termid":"PBO:0076078"}


id: PBO:0038567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein 1","termid":"PBO:0038567"}


id: PBO:0089478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon subunit Sec61 homolog","termid":"PBO:0089478"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76004],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: MOD:01566
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01566"}


id: GO:1903244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle hypertrophy in response to stress.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:19287093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle adaptation","termid":"GO:0010615"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle hypertrophy in response to stress","termid":"GO:1903242"},{"relation_name":"positively_regulates","term_name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle hypertrophy in response to stress","synonyms":[{"name":"activation of cardiac muscle hypertrophy in response to stress","type":"narrow"},{"name":"up regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"up-regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"upregulation of cardiac muscle hypertrophy in response to stress","type":"exact"}],"termid":"GO:1903244"}


id: PBO:0072197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 14","termid":"PBO:0072197"}


id: PBO:0080692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 4","termid":"PBO:0080692"}


id: PBO:0065298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 2","termid":"PBO:0065298"}


id: PBO:0089190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD family chromatin remodeller Hrp3","termid":"PBO:0089190"}


id: GO:0030272
data:
  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72915],"is_not":false,"summary":null,"term":"GO:0030272"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formyltetrahydrofolate + ATP = 5,10-methenyltetrahydrofolate + ADP + H+ + phosphate.","definition_xrefs":["EC:6.3.3.2","RHEA:10488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:5-FORMYL-THF-CYCLO-LIGASE-RXN","Reactome:R-HSA-6801342","GO:0019006","KEGG_REACTION:R02301"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase activity","type":"related"},{"name":"5-Formyltetrahydrofolate cyclodehydrase activity","type":"related"},{"name":"5-formyltetrahydrofolate cyclo-ligase (ADP-forming)","type":"related"},{"name":"5-formyltetrahydrofolate cyclodehydrase","type":"broad"},{"name":"formyltetrahydrofolic cyclodehydrase activity","type":"related"},{"name":"methenyl-THF synthetase activity","type":"related"}],"termid":"GO:0030272","terms_by_termid":{"GO:0030272":null}}


id: GO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proteins transported from mitochondria and targeted to cytoplasmic proteasomes for degradation as a response to oxidative stress conditions.","definition_xrefs":["PMID:21109188","GOC:mcc","PMID:21070972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mitochondria-associated ubiquitin-dependent protein catabolic process","synonyms":[{"name":"MAD","type":"exact"},{"name":"mitochondria-associated protein catabolic process","type":"exact"},{"name":"mitochondria-associated protein degradation","type":"exact"},{"name":"mitochondrion-associated protein catabolic process","type":"exact"}],"termid":"GO:0072671"}


id: PBO:0055087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2505","termid":"PBO:0055087"}


id: GO:0043111
data:
  {"annotated_genes":["SJAG_03997","SJAG_04855","SJAG_00247","SJAG_02724","SJAG_04671","SJAG_03097"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103544],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[103545,99687,108832,106953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[115327,99688,102596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[99689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[102597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA replication by impeding the progress of the DNA replication fork. Replication fork arrest is one of the 'quality control' processes ensuring that DNA-dependent DNA replication occurs correctly. DNA replication fork arrest during DNA-dependent DNA replication is not known to occur outside of cases where a replication error needs to be prevented or corrected.","definition_xrefs":["GOC:pr","GOC:jl","PMID:14645529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"replication fork arrest","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA replication at replication fork barrier","type":"exact"},{"name":"replication fork blocking","type":"exact"},{"name":"replication fork stalling","type":"exact"}],"termid":"GO:0043111","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null}}


id: GO:1901179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of spheroidene.","definition_xrefs":["UniPathway:UPA00683","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"spheroidene metabolic process","termid":"GO:1901178"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"spheroidene catabolic process","synonyms":[{"name":"spheroidene breakdown","type":"exact"},{"name":"spheroidene catabolism","type":"exact"},{"name":"spheroidene degradation","type":"exact"}],"termid":"GO:1901179"}


id: PBO:0030236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_calcium_level","termid":"PBO:0030236"}


id: MONDO:0011001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the SCN5A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 1","secondary_identifiers":["MEDGEN:1646402","UMLS:C4551804","OMIM:601144","DOID:0110218"],"synonyms":[{"name":"BRGDA1","type":"exact"},{"name":"Brugada syndrome 1","type":"exact"},{"name":"Brugada syndrome caused by mutation in SCN5A","type":"exact"},{"name":"Brugada syndrome type 1","type":"exact"},{"name":"Cardiac conduction defect, nonspecific","type":"related"},{"name":"SCN5A Brugada syndrome","type":"exact"},{"name":"right bundle branch block, St segment elevation, and sudden death syndrome","type":"related"},{"name":"sudden unexplained nocturnal death syndrome","type":"related"}],"termid":"MONDO:0011001","xrefs":{"Monarch":{"xref_id":"0011001"}}}


id: MONDO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophytosis that involves the hands.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea manuum","secondary_identifiers":["ICD9:110.2","ICD10CM:B35.2","MEDGEN:509222","SCTID:48971001","DOID:13369","UMLS:C0153246"],"synonyms":[{"name":"Tinea manus","type":"exact"},{"name":"dermatophytosis of hand","type":"exact"},{"name":"dermatophytosis of manus","type":"exact"},{"name":"manus dermatophytosis","type":"exact"}],"termid":"MONDO:0001699","xrefs":{"Monarch":{"xref_id":"0001699"}}}


id: GO:0100019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cAMP-mediated signaling.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling by transcription from RNA polymerase II promoter (obsolete GO:0100019)","termid":"GO:0100019"}


id: PBO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein involved in ER membrane tethering","termid":"PBO:0018287"}


id: MONDO:0024597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD3epsilon deficiency (obsolete MONDO:0024597)","termid":"MONDO:0024597","xrefs":{"Monarch":{"xref_id":"0024597"}}}


id: GO:0031954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"positively_regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein autophosphorylation","synonyms":[{"name":"activation of protein amino acid autophosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"stimulation of protein amino acid autophosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"upregulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031954"}


id: GO:0033580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid at the surface of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation at cell surface (obsolete GO:0033580)","synonyms":[{"name":"protein amino acid galactosylation at cell surface","type":"exact"}],"termid":"GO:0033580"}


id: PBO:0087170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II largest subunit B220; part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime","termid":"PBO:0087170"}


id: MONDO:0023179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile X syndrome","termid":"MONDO:0010383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile X syndrome type 2","termid":"MONDO:0023179","xrefs":{"Monarch":{"xref_id":"0023179"}}}


id: GO:0102933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-4-amino-4,6-dideoxy-alpha-D-mannose + 2-oxoglutarate = GDP-4-dehydro-6-deoxy-alpha-D-mannose + L-glutamate.","definition_xrefs":["GOC:pz","RHEA:36779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase activity","secondary_identifiers":["MetaCyc:RXN-8953","EC:2.6.1.102"],"termid":"GO:0102933"}


id: PBO:0078422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-3","termid":"PBO:0078422"}


id: GO:1903412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21757002","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bile acid","termid":"GO:1903412"}


id: MONDO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder presenting in childhood that is characterized by either motor or phonic tics, but not both, that occur daily or nearly daily for at least a year and are not attributed to an identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tic disorder","termid":"MONDO:0002420"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic tic disorder","secondary_identifiers":["MEDGEN:40301","DOID:10600","ICD10CM:F95.1","NCIT:C116768","UMLS:C0008701","ICD9:307.22"],"synonyms":[{"name":"chronic motor or vocal tic disorder","type":"exact"},{"name":"tic disorder, chronic","type":"exact"}],"termid":"MONDO:0001074","xrefs":{"Monarch":{"xref_id":"0001074"}}}


id: PBO:0058712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6840","termid":"PBO:0058712"}


id: PBO:0078062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 52","termid":"PBO:0078062"}


id: PBO:0091198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met","termid":"PBO:0091198"}


id: FYPO:0007576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fission, i.e. the division of one vacuole into two or more separate vacuoles, is abnormal.","definition_xrefs":["PomBase:mah","GO:0140572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole fission","synonyms":[{"name":"abnormal vacuole division","type":"exact"},{"name":"abnormal vacuole fission during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole fission during vegetative growth","type":"exact"}],"termid":"FYPO:0007576"}


id: GO:0140275
data:
  {"annotated_genes":["SJAG_04237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118086],"is_not":false,"summary":null,"term":"GO:0140275"}]},"cv_name":"cellular_component","definition":"A mitochondrial intermembrane space bridging complex consisting of components of the MICOS complex in the inner mitochondrial membrane, the SAM complex in the outer membrane, a conserved DNAJ protein (human DNAJC11) and Metaxin 1.","definition_xrefs":["PMID:26477565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"MIB complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial intermembrane space bridging complex","type":"exact"},{"name":"mitofilin complex","type":"exact"}],"termid":"GO:0140275","terms_by_termid":{"GO:0140275":null}}


id: PBO:0057316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518c","termid":"PBO:0057316"}


id: PBO:0062441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 105 pseudogene","termid":"PBO:0062441"}


id: MONDO:0030767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic tumor of hematopoietic and lymphoid tissues (obsolete MONDO:0030767)","secondary_identifiers":["Orphanet:322126"],"termid":"MONDO:0030767","xrefs":{"Monarch":{"xref_id":"0030767"}}}


id: MONDO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prolapse of the urethral mucosa from the exterior urethral opening.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"},{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolapse of urethra","secondary_identifiers":["MEDGEN:451007","SCTID:12068006","ICD9:599.5","DOID:12369","ICD10CM:N81.0","ICD9:618.03","UMLS:C0238502"],"synonyms":[{"name":"urethrocele","type":"exact"}],"termid":"MONDO:0001514","xrefs":{"Monarch":{"xref_id":"0001514"}}}


id: GO:0043651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving linoleic acid, an unsaturated omega-6 fatty acid that has the molecular formula C18H32O2.","definition_xrefs":["Wikipedia:Linoleic_Acid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"linoleic acid metabolic process","secondary_identifiers":["Wikipedia:Linoleic_acid","Reactome:R-HSA-2046105"],"synonyms":[{"name":"linoleic acid metabolism","type":"exact"}],"termid":"GO:0043651"}


id: FYPO:0001646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutamate import","synonyms":[{"name":"abnormal L-glutamate import","type":"exact"},{"name":"abnormal L-glutamate import across plasma membrane","type":"exact"},{"name":"abnormal glutamate import into cell","type":"exact"},{"name":"abnormal glutamate uptake","type":"exact"}],"termid":"FYPO:0001646"}


id: MONDO:0011226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the POU4F3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 15","secondary_identifiers":["MESH:C566545","UMLS:C1865366","OMIM:602459","GARD:18109","DOID:0110546","MEDGEN:355451"],"synonyms":[{"name":"DFNA15","type":"narrow"},{"name":"POU4F3 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 15","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 15","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in POU4F3","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 15","type":"narrow"},{"name":"deafness, autosomal dominant 15","type":"narrow"},{"name":"deafness, autosomal dominant type 15","type":"narrow"}],"termid":"MONDO:0011226","xrefs":{"Monarch":{"xref_id":"0011226"}}}


id: MONDO:0008146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type I is a mild type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures.","definition_xrefs":["Orphanet:216796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 1","secondary_identifiers":["SCTID:385482004","DOID:0110334","GARD:8694","MEDGEN:9799","OMIM:166200","icd11.foundation:1897905410","NCIT:C99003","UMLS:C0023931"],"synonyms":[{"name":"Adair-Dighton syndrome","type":"exact"},{"name":"OI type 1","type":"exact"},{"name":"OI, type 1","type":"related"},{"name":"OI1","type":"exact"},{"name":"Van der Hoeve syndrome","type":"exact"},{"name":"classic non-deforming OI with blue sclerae","type":"related"},{"name":"mild osteogenesis imperfecta","type":"exact"},{"name":"non-deforming osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta tarda","type":"related"},{"name":"osteogenesis imperfecta type 1","type":"exact"},{"name":"osteogenesis imperfecta type I","type":"exact"},{"name":"osteogenesis imperfecta with blue sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 1","type":"related"},{"name":"osteogenesis imperfecta, type I","type":"related"}],"termid":"MONDO:0008146","xrefs":{"Monarch":{"xref_id":"0008146"}}}


id: GO:0008478
data:
  {"annotated_genes":["SJAG_00252","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75574,78496],"is_not":false,"summary":null,"term":"GO:0008478"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate.","definition_xrefs":["EC:2.7.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"pyridoxal kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-964962","Reactome:R-HSA-964958","Reactome:R-HSA-964970","MetaCyc:PYRIDOXKIN-RXN","RHEA:10224"],"synonyms":[{"name":"ATP:pyridoxal 5'-phosphotransferase activity","type":"related"},{"name":"pyridoxal 5-phosphate-kinase activity","type":"related"},{"name":"pyridoxal kinase (phosphorylating)","type":"related"},{"name":"pyridoxal phosphokinase activity","type":"related"},{"name":"pyridoxamine kinase activity","type":"related"},{"name":"pyridoxine kinase activity","type":"related"},{"name":"vitamin B(6) kinase activity","type":"related"},{"name":"vitamin B6 kinase activity","type":"related"}],"termid":"GO:0008478","terms_by_termid":{"GO:0008478":null}}


id: PBO:0028861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_micafungin","termid":"PBO:0028861"}


id: PBO:0072146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 23","termid":"PBO:0072146"}


id: PBO:0057343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 527","termid":"PBO:0057343"}


id: MONDO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"noninfectious dermatoses of eyelid","secondary_identifiers":["icd11.foundation:849793428","MEDGEN:509831","UMLS:C0155176","SCTID:111524003","DOID:1894","ICD9:373.3"],"synonyms":[{"name":"non-infected eyelid dermatoses","type":"exact"}],"termid":"MONDO:0002137","xrefs":{"Monarch":{"xref_id":"0002137"}}}


id: MONDO:0044208
data:
  {"annotated_genes":["SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87067],"is_not":false,"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","definition":"Specific granule deficiency-2 is an autosomal recessive immunologic disorder characterized by recurrent infections due to defective neutrophil development. Bone marrow findings include hypercellularity, abnormal megakaryocytes, and features of progressive myelofibrosis with blasts. The disorder is apparent from infancy, and most patients die in early childhood unless they undergo hematopoietic stem cell transplantation. Some patients may have additional findings, including delayed development, mild dysmorphic features, and distal skeletal anomalies (summary by {2:Witzel et al., 2017}).nnFor a discussion of genetic heterogeneity of SGD, see SGD1 (OMIM:245480).","definition_xrefs":["OMIM:617475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific granule deficiency","termid":"MONDO:0009506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"specific granule deficiency 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1371952","UMLS:C4479548"],"synonyms":[{"name":"SGD2","type":"related"},{"name":"specific granule deficiency 2","type":"exact"}],"termid":"MONDO:0044208","terms_by_termid":{"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0044208"}}}


id: PBO:0091997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR-associated","termid":"PBO:0091997"}


id: PBO:0042221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 2","termid":"PBO:0042221"}


id: PBO:0047228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 229 member B","termid":"PBO:0047228"}


id: SO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The determinant of selective removal (DSR) motif consists of repeats of U(U/C)AAAC. The motif targets meiotic transcripts for removal during mitosis via the exosome.","definition_xrefs":["PMID:22645662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSR_motif","synonyms":[{"name":"DSR motif","type":"exact"}],"termid":"SO:0002005"}


id: PBO:0018200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt1","termid":"PBO:0018200"}


id: PR:O13851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.12","synonyms":[{"name":"Spom972h-dlp1","type":"exact"},{"name":"all-trans-decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"decaprenyl pyrophosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13851"}


id: PBO:0087960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein with a highly basic C-terminal region","termid":"PBO:0087960"}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: PBO:0117166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP152 antisense RNA 1","termid":"PBO:0117166"}


id: PBO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid P component, serum","termid":"PBO:0039692"}


id: PBO:0066217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 13","termid":"PBO:0066217"}


id: PBO:0065977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap associating with DIL domain","termid":"PBO:0065977"}


id: MONDO:0017747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of protein O-glycosylation","termid":"MONDO:0017741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"disorder of fucoglycosan synthesis","secondary_identifiers":["UMLS:C5681046","MEDGEN:1843205","Orphanet:309505","GARD:21341"],"termid":"MONDO:0017747","xrefs":{"Monarch":{"xref_id":"0017747"}}}


id: GO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of (2R,6R)-lanthionine (L-lanthionine).","definition_xrefs":["RESID:AA0110"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2R,6R)-lanthionine (obsolete GO:0018154)","termid":"GO:0018154"}


id: PBO:0017042
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PantoThenate Kinase","termid":"PBO:0017042"}


id: GO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoarabinomannan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"lipoarabinomannan immune receptor activity","synonyms":[{"name":"LAM receptor activity","type":"exact"},{"name":"lipoarabinomannan receptor activity","type":"broad"}],"termid":"GO:0001877"}


id: PBO:0028649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mRNA_splicing,_via_spliceosome","termid":"PBO:0028649"}


id: PBO:0038840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS9 antisense RNA 1","termid":"PBO:0038840"}


id: RO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x does not overlaps the sequence of x if and only if there is no z such that x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does_not_overlap_sequence_of","termid":"RO:0002527"}


id: PR:Q9C115
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.18c","synonyms":[{"name":"Spom972h-rec25","type":"exact"},{"name":"meiotically up-regulated gene 19 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C115"}


id: GO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines.","definition_xrefs":["GOC:go_curators","PMID:9082980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TRAIL binding","synonyms":[{"name":"Apo-2L binding","type":"exact"}],"termid":"GO:0045569"}


id: PBO:0027704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_HMW_ubiquitin_conjugate_level","termid":"PBO:0027704"}


id: MONDO:0019620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital esophageal diverticulum is a rare, non-syndromic malformation of the esophagus, present at birth, and characterized by a false diverticulum, most often located in the upper, posterior esophagus. Many patients are asymptomatic, but respiratory distress, food regurgitation, dysphagia, chest pain, aspiration pneumonia and discomfort are typical presenting manifestations.","definition_xrefs":["Orphanet:91358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital esophageal diverticulum","secondary_identifiers":["ICD9:750.4","MEDGEN:539704","SCTID:204667006","GARD:19165","UMLS:C0266133","icd11.foundation:42183618"],"synonyms":[{"name":"congenital esophageal pouch","type":"exact"}],"termid":"MONDO:0019620","xrefs":{"Monarch":{"xref_id":"0019620"}}}


id: MONDO:0014025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proximal spinal muscular atrophy","termid":"MONDO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"lower motor neuron syndrome with late-adult onset","secondary_identifiers":["UMLS:C3554398","icd11.foundation:1650555742","Orphanet:276435","MEDGEN:767312","OMIM:615048","DOID:0081356","GARD:17282"],"synonyms":[{"name":"SMAJ","type":"related"},{"name":"spinal muscular atrophy, Jokela type","type":"related"}],"termid":"MONDO:0014025","xrefs":{"Monarch":{"xref_id":"0014025"}}}


id: PBO:0086731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein; YGL262W is not an essential gene","termid":"PBO:0086731"}


id: GO:0047865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + electron-transfer flavoprotein + H2O = sarcosine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["RHEA:52856","EC:1.5.8.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01565","Reactome:R-HSA-6797653","MetaCyc:DIMETHYLGLYCINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N,N-dimethylglycine oxidase activity","type":"related"},{"name":"N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N,N-dimethylglycine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047865"}


id: FYPO:0007412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the orientation of the mitotic spindle is normal (i.e. indistinguishable from wild type, parallel with the long axis of the cell).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle orientation","termid":"FYPO:0007412"}


id: PBO:0064097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeodomain 2","termid":"PBO:0064097"}


id: PBO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 14","termid":"PBO:0060067"}


id: PR:O94446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone acetyltransferase KAT5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.12c","secondary_identifiers":["UniProtKB:O94446"],"synonyms":[{"name":"Spom972h-KAT5","type":"exact"}],"termid":"PR:O94446"}


id: PBO:0031650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G1_phase_progression","termid":"PBO:0031650"}


id: GO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alpha-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["PMID:9919658","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alpha-glucoside transport","termid":"GO:0000017"}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: GO:0030689
data:
  {"annotated_genes":["SJAG_03654","SJAG_00838","SJAG_00311","SJAG_01275","SJAG_01494","SJAG_04346"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98206,80499,73242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030690"},{"annotations":[73243,112743,80500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030691"},{"annotations":[73052,79007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"Any of several heterodimers containing one or two Noc proteins, associated with preribosomal complexes; involved in ribosome biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00838":null,"SJAG_01275":null,"SJAG_01494":null,"SJAG_03654":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Noc complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030689","terms_by_termid":{"GO:0030690":null,"GO:0030691":null,"GO:0030692":null}}


id: FYPO:0005504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which galactose-specific flocculation does not occur. Galactose-specific flocculation is the non-sexual aggregation of single cells, mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["PomBase:mah","PMID:23236291","GO:0036349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished galactose-specific flocculation","synonyms":[{"name":"abolished flocculation","type":"broad"},{"name":"galactose-specific flocculation abolished","type":"exact"}],"termid":"FYPO:0005504"}


id: PBO:0063085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 4","termid":"PBO:0063085"}


id: FYPO:0006270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to phosphate starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to phosphate starvation","termid":"FYPO:0003195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to phosphate starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"increased RNA level during cellular response to phosphate depletion","type":"exact"},{"name":"increased RNA level during cellular response to phosphate deprivation","type":"exact"},{"name":"increased RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during phosphate starvation","type":"exact"},{"name":"increased mRNA level during cellular response to phosphate starvation","type":"narrow"},{"name":"increased transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006270"}


id: FYPO:0000847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased protein degradation during vegetative growth","synonyms":[{"name":"increased protein breakdown during vegetative growth","type":"exact"},{"name":"increased protein catabolic process during vegetative growth","type":"exact"},{"name":"increased protein catabolism during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000847"}


id: GO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum development","termid":"GO:0048726"}


id: GO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a NAD(P)+ to NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","secondary_identifiers":["EC:1.20.1.-"],"termid":"GO:0050499"}


id: MONDO:0017308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hypothesized form of Marfan; dubious","gene_count":0,"genotype_count":0,"name":"obsolete Marfan syndrome type 2 (obsolete MONDO:0017308)","secondary_identifiers":["Orphanet:284973","NCIT:C75007","MESH:C535911"],"synonyms":[{"name":"MFS2","type":"exact"},{"name":"Marfan syndrome type II","type":"exact"}],"termid":"MONDO:0017308","xrefs":{"Monarch":{"xref_id":"0017308"}}}


id: PBO:0038911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F1","termid":"PBO:0038911"}


id: PBO:0078185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 2","termid":"PBO:0078185"}


id: PBO:0041846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASK antisense RNA 1","termid":"PBO:0041846"}


id: MONDO:0008723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited disorder of mitochondrial long-chain fatty acid oxidation with a variable presentation including: cardiomyopathy, hypoketotic hypoglycemia, liver disease, exercise intolerance and rhabdomyolysis.","definition_xrefs":["Orphanet:26793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0005267"],"is_obsolete":false,"name":"very long chain acyl-CoA dehydrogenase deficiency","secondary_identifiers":["DOID:0080155","SCTID:237997005","UMLS:C3887523","icd11.foundation:907810567","NANDO:2201139","ICD10CM:E71.310","NANDO:2200512","NCIT:C98647","NORD:1827","OMIM:201475","MEDGEN:854382","GARD:5508"],"synonyms":[{"name":"ACADVLD","type":"related"},{"name":"VLCAD","type":"exact"},{"name":"VLCAD deficiency","type":"exact"},{"name":"VLCADD","type":"exact"},{"name":"Very Long Chain Acyl CoA Dehydrogenase Deficiency (LCAD)","type":"exact"},{"name":"acyl-CoA dehydrogenase, very long-chain deficiency","type":"exact"},{"name":"acyl-CoA dehydrogenase, very long-chain, deficiency OF","type":"related"},{"name":"very long chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"very long-chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"very long-chain acyl-Coenzyme A dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0008723","xrefs":{"Monarch":{"xref_id":"0008723"}}}


id: RO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in catabolism of c if and only if p is a catabolic process, and the execution of p results in c being broken into smaller parts with energy being released.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_breakdown_of","termid":"RO:0002586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_catabolism_of","termid":"RO:0002589"}


id: PBO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit G (predicted)","termid":"PBO:0000536"}


id: MONDO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess that is located in the ureter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoureter","secondary_identifiers":["icd11.foundation:692694709","DOID:1425","MEDGEN:19600","NCIT:C35666","ICD9:593.89","UMLS:C0034223","SCTID:85884009"],"synonyms":[{"name":"ureter abscess","type":"exact"}],"termid":"MONDO:0001922","xrefs":{"Monarch":{"xref_id":"0001922"}}}


id: MONDO:0017768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reflex epilepsy refers to epilepsies where recurrent seizures are provoked by a clearly defined extrinsic (most commonly) or intrinsic triggering stimuli such as flashing lights (photosensitive epilepsy), startling noises (startle epilepsy), urinating (micturition induced seizures), exposure to hot-water (hot water epilepsy), eating, reading, and thinking, while being associated with an enduring abnormal predisposition to have such seizures (thereby meeting the conceptual definition of epilepsy).","definition_xrefs":["Orphanet:310"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"excluded_subClassOf","term_name":"adolescent-onset epilepsy syndrome","termid":"MONDO:0020073"},{"relation_name":"excluded_subClassOf","term_name":"variable-age onset epilepsy syndrome","termid":"MONDO:0100036"},{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"reflex epilepsy","secondary_identifiers":["MESH:D020195","MEDGEN:75726","icd11.foundation:276807111","NCIT:C85041","DOID:2548","EFO:1001146","UMLS:C0270857","SCTID:79745005","ICD9:345.10","GARD:18688"],"synonyms":[{"name":"epilepsy, sensory-induced","type":"exact"}],"termid":"MONDO:0017768","xrefs":{"Monarch":{"xref_id":"0017768"}}}


id: SO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of DNA located either at the end of the transcript that causes RNA polymerase to terminate transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"},{"relation_name":"part_of","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator","secondary_identifiers":["http://en.wikipedia.org/wiki/Terminator_(genetics)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:terminator","type":"exact"},{"name":"terminator sequence","type":"exact"}],"termid":"SO:0000141"}


id: GO:0034721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from a trimetylated lysine at position 4 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 demethylation, trimethyl-H3-K4-specific (obsolete GO:0034721)","synonyms":[{"name":"H3K4 demethylation (me3)","type":"exact"},{"name":"histone H3-K4 tridemethylation","type":"related"}],"termid":"GO:0034721"}


id: FYECO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron trichloride was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl3","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron trichloride added","type":"exact"},{"name":"iron(III) chloride","type":"exact"}],"termid":"FYECO:0000281"}


id: MONDO:0008540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extensor tendons of finger anomalies","secondary_identifiers":["Orphanet:3294","GARD:2597","MESH:C566068","UMLS:C1861237","OMIM:187390","MEDGEN:348302"],"synonyms":[{"name":"Hapnes Boman Skeie syndrome","type":"related"},{"name":"Hapnes-Boman-Skeie syndrome","type":"exact"},{"name":"anomalous insertion of extensor tendons of fingers","type":"related"},{"name":"tendons, extensor, of fingers, anomalous insertion OF","type":"related"}],"termid":"MONDO:0008540","xrefs":{"Monarch":{"xref_id":"0008540"}}}


id: PBO:0072072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 2","termid":"PBO:0072072"}


id: GO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where the cap structure, composed of a 7- methylguanosine (m7G) group and associated cap-binding proteins, located at the 5' end of an mRNA molecule, which serves as a molecular tag that marks the spot where the 40S ribosomal subunit, is recruited and will then scan in a 5' to 3' direction until an AUG codon is encountered in an appropriate sequence context to initiate mRNA translation.","definition_xrefs":["PMID:19604130","PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"cap-dependent translational initiation","termid":"GO:0002191"}


id: PBO:0059288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 3","termid":"PBO:0059288"}


id: PBO:0078947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 5-1","termid":"PBO:0078947"}


id: GO:1901888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell junction assembly","termid":"GO:1901888"}


id: PBO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC family","termid":"PBO:0000849"}


id: MONDO:0957990
data:
  {"annotated_genes":["SJAG_02292"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86416],"is_not":false,"summary":null,"term":"MONDO:0957990"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02292":null},"genotype_count":0,"is_obsolete":false,"name":"Tan-Almurshedi syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1848300","OMIM:620641","UMLS:C5882727"],"termid":"MONDO:0957990","terms_by_termid":{"MONDO:0957990":null},"xrefs":{"Monarch":{"xref_id":"0957990"}}}


id: GO:1901168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-chlorocatechol.","definition_xrefs":["GOC:yaf","UniPathway:UPA00083","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"3-chlorocatechol metabolic process","termid":"GO:1901167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol catabolic process","synonyms":[{"name":"3-chlorocatechol breakdown","type":"exact"},{"name":"3-chlorocatechol catabolism","type":"exact"},{"name":"3-chlorocatechol degradation","type":"exact"}],"termid":"GO:1901168"}


id: PBO:0073887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 4","termid":"PBO:0073887"}


id: GO:0090259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:yaf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"}


id: PBO:0064894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''gamma","termid":"PBO:0064894"}


id: MONDO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete benign familial neonatal-infantile seizures (obsolete MONDO:0011140)","termid":"MONDO:0011140"},{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign familial neonatal-infantile seizures 1","secondary_identifiers":["MEDGEN:1638448","DOID:0081114","UMLS:C4551769","GARD:856","OMIM:601764"],"synonyms":[{"name":"BFIC1","type":"related"},{"name":"BFIS1","type":"related"},{"name":"benign familial infantile convulsions syndrome","type":"related"},{"name":"benign familial infantile convulsions syndrome 1","type":"related"},{"name":"benign infantile familial convulsions","type":"related"},{"name":"benign infantile familial convulsions 1","type":"related"},{"name":"convulsions, benign familial infantile, 1","type":"related"},{"name":"seizures, benign familial infantile, 1","type":"related"}],"termid":"MONDO:0042499","xrefs":{"Monarch":{"xref_id":"0042499"}}}


id: PBO:0055081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2499","termid":"PBO:0055081"}


id: MONDO:0006336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endometrioid adenocarcinoma that arises from the ovary and exhibits squamous differentiation. The squamous cell component often has a cytologically benign appearance.","definition_xrefs":["NCIT:C40061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian endometrioid adenocarcinoma","termid":"MONDO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","secondary_identifiers":["UMLS:C2212017","EFO:1000417","MEDGEN:389178"],"synonyms":[{"name":"ovarian adenoacanthoma","type":"exact"},{"name":"ovarian adenosquamous carcinoma","type":"exact"},{"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","type":"exact"}],"termid":"MONDO:0006336","xrefs":{"Monarch":{"xref_id":"0006336"}}}


id: PBO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 6","termid":"PBO:0045138"}


id: FYPO:0001057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal amino acid import","synonyms":[{"name":"abnormal amino acid import across plasma membrane","type":"exact"},{"name":"abnormal amino acid import into cell","type":"exact"},{"name":"abnormal amino acid uptake","type":"exact"}],"termid":"FYPO:0001057"}


id: PBO:0045547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 2","termid":"PBO:0045547"}


id: FYPO:0005177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the modification of a wobble base uridine residue in a tRNA to 2-thiouridine is abolished.","definition_xrefs":["PomBase:mah","GO:0003143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished tRNA modification","termid":"FYPO:0008344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abolished tRNA wobble position uridine thiolation","synonyms":[{"name":"abolished tRNA wobble position uridine thiolation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA wobble position uridine thiolation during vegetative growth","type":"exact"},{"name":"abolished wobble position s2U biosynthesis","type":"exact"},{"name":"tRNA wobble position uridine thiolation abolished","type":"exact"}],"termid":"FYPO:0005177"}


id: PBO:0058224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4514","termid":"PBO:0058224"}


id: PBO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase (predicted)","termid":"PBO:0000259"}


id: PBO:0031237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_hydrogen_peroxide","termid":"PBO:0031237"}


id: PBO:0055493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2927","termid":"PBO:0055493"}


id: MONDO:0035075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary early-onset glaucoma of genetic origin (obsolete MONDO:0035075)","secondary_identifiers":["Orphanet:522580"],"termid":"MONDO:0035075","xrefs":{"Monarch":{"xref_id":"0035075"}}}


id: PBO:0048804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha z","termid":"PBO:0048804"}


id: PBO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog B","termid":"PBO:0046680"}


id: PBO:0061715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2A","termid":"PBO:0061715"}


id: MONDO:0043099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"pulmonary valve stenosis","termid":"MONDO:0006936"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005267"],"is_obsolete":false,"name":"Hordnes Engebretsen Knudtson syndrome","secondary_identifiers":["GARD:2736","MEDGEN:419333","MESH:C536067","UMLS:C2931100"],"synonyms":[{"name":"acrobrachycephaly, ventriculomegaly, pulmonary stenosis, ectopic anus and intellectual disability","type":"related"},{"name":"acrobrachycephaly, ventriculomegaly, pulmonary stenosis, ectopic anus and mental retardation","type":"related"}],"termid":"MONDO:0043099","xrefs":{"Monarch":{"xref_id":"0043099"}}}


id: PATO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001008 absolute latency value (obsolete PATO:0001008)","termid":"PATO:0001008"}


id: MONDO:1011048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome, non-human animal","termid":"MONDO:1010261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, domestic cat","secondary_identifiers":["OMIA:000712-9685"],"termid":"MONDO:1011048","xrefs":{"Monarch":{"xref_id":"1011048"}}}


id: PBO:0062772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Z member 1 pseudogene","termid":"PBO:0062772"}


id: PBO:0061248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2","termid":"PBO:0061248"}


id: MONDO:0958296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma with BCOR genetic alterations that is characterized by the presence of BCOR-CCNB3 fusion gene.","definition_xrefs":["DOID:0081404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma with BCOR genetic alterations","termid":"MONDO:0958159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"BCOR-CCNB3 sarcoma","secondary_identifiers":["UMLS:C5555058","MEDGEN:1791499"],"termid":"MONDO:0958296","xrefs":{"Monarch":{"xref_id":"0958296"}}}


id: PBO:0069666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 943, pseudogene","termid":"PBO:0069666"}


id: PBO:0039179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 9","termid":"PBO:0039179"}


id: FYPO:0004108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during mitotic G1 phase","synonyms":[{"name":"increased protein accumulation during mitotic G1 phase","type":"related"},{"name":"increased protein level during G1 phase of mitotic cell cycle","type":"related"},{"name":"increased protein level during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004108"}


id: PBO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding","termid":"PBO:0031561"}


id: MONDO:0014569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the CNTNAP1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 7","secondary_identifiers":["UMLS:C4225386","GARD:18564","MEDGEN:894160","OMIM:616286"],"synonyms":[{"name":"CNTNAP1 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS7","type":"related"},{"name":"lethal congenital contracture syndrome 7","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in CNTNAP1","type":"exact"},{"name":"lethal congenital contracture syndrome type 7","type":"exact"}],"termid":"MONDO:0014569","xrefs":{"Monarch":{"xref_id":"0014569"}}}


id: PR:O94397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgf73 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA-associated factor 73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.04c","synonyms":[{"name":"Spom972h-sgf73","type":"exact"}],"termid":"PR:O94397"}


id: GO:0030429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + H2O = anthranilate + L-alanine + H+. Also acts on 3'-hydroxykynurenine and some other (3-arylcarbonyl)- alanines.","definition_xrefs":["EC:3.7.1.3","PMID:17300176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"kynureninase activity","secondary_identifiers":["Reactome:R-HSA-71217","MetaCyc:KYNURENINASE-RXN"],"synonyms":[{"name":"L-kynurenine hydrolase activity","type":"related"},{"name":"kynurenine hydrolase activity","type":"related"}],"termid":"GO:0030429"}


id: PBO:0029510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_septated_cells_(obsolete_FYPO:0002204)","termid":"PBO:0029510"}


id: MOD:00427
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a methyl group.","definition_xrefs":["DeltaMass:36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated residue","synonyms":[{"name":"MeRes","type":"exact"},{"name":"Methylation (N terminus, N epsilon of Lysine, O of Serine, Threonine or C terminus, N of Asparagine)","type":"exact"}],"termid":"MOD:00427"}


id: GO:1904538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["ISBN:0201090910","GO_REF:0000058","GOC:TermGenie","ISBN:0879010479","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"regulation of glycolytic process through fructose-6-phosphate","secondary_identifiers":["Reactome:R-HSA-9634600"],"synonyms":[{"name":"regulation of glycolysis through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904538"}


id: PBO:0067435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 556, pseudogene","termid":"PBO:0067435"}


id: PBO:0077164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 5, transcriptional modulator","termid":"PBO:0077164"}


id: PBO:0066788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 87","termid":"PBO:0066788"}


id: GO:0046179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keto-D-gluconate metabolic process","termid":"GO:0019525"},{"relation_name":"is_a","term_name":"ketogluconate biosynthetic process","termid":"GO:0046180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"keto-D-gluconate biosynthetic process","synonyms":[{"name":"keto-D-gluconate anabolism","type":"exact"},{"name":"keto-D-gluconate biosynthesis","type":"exact"},{"name":"keto-D-gluconate formation","type":"exact"},{"name":"keto-D-gluconate synthesis","type":"exact"}],"termid":"GO:0046179"}


id: GO:0006196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of AMP, adenosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"AMP catabolic process","synonyms":[{"name":"AMP breakdown","type":"exact"},{"name":"AMP catabolism","type":"exact"},{"name":"AMP degradation","type":"exact"}],"termid":"GO:0006196"}


id: PBO:0057756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1915","termid":"PBO:0057756"}


id: PBO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type","termid":"PBO:0000153"}


id: GO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + ATP + NH4 = L-asparagine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.1.4","RHEA:14197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"aspartate-ammonia ligase (ADP-forming) activity","secondary_identifiers":["MetaCyc:6.3.1.4-RXN","KEGG_REACTION:R00482"],"synonyms":[{"name":"L-aspartate:ammonia ligase (ADP-forming)","type":"related"},{"name":"asparagine synthetase (ADP-forming) activity","type":"related"},{"name":"asparagine synthetase (adenosine diphosphate-forming)","type":"related"}],"termid":"GO:0047478"}


id: PBO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex RNA-binding subunit Rmn1","termid":"PBO:0090428"}


id: PBO:0081159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFPM2 antisense RNA 1","termid":"PBO:0081159"}


id: GO:0106020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle docking","synonyms":[{"name":"regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106020"}


id: FYPO:0007970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a higher rate, or speed, than normal.","definition_xrefs":["PomBase:mlr","PMID:35293864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}


id: GO:0061873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell contraction.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"hepatic stellate cell contraction","termid":"GO:0061872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell contraction","termid":"GO:0061873"}


id: GO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a virus capsid that occurs in the cytoplasm.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic capsid assembly","termid":"GO:0039709"}


id: GO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases autophagosome size.","definition_xrefs":["GOC:go_curators","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagosome size","synonyms":[{"name":"activation of autophagic vacuole size","type":"narrow"},{"name":"positive regulation of autophagic vacuole size","type":"exact"},{"name":"stimulation of autophagic vacuole size","type":"narrow"},{"name":"up regulation of autophagic vacuole size","type":"exact"},{"name":"up-regulation of autophagic vacuole size","type":"exact"},{"name":"upregulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045772"}


id: GO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-glucosamine = di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + H+ + UDP.","definition_xrefs":["RHEA:31227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity","secondary_identifiers":["MetaCyc:NACGLCTRANS-RXN"],"termid":"GO:0051991"}


id: PBO:0042408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 20B","termid":"PBO:0042408"}


id: PBO:0085812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; exhibits genetic interactions with Rtr1p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YDR066C is not an essential gene; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress; RTR2 has a paralog, RTR1, that arose from the whole genome duplication","termid":"PBO:0085812"}


id: PBO:0053872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1148","termid":"PBO:0053872"}


id: GO:0048609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal reproductive process","secondary_identifiers":["Reactome:R-HSA-1474165"],"synonyms":[{"name":"organismal reproductive process","type":"broad"},{"name":"reproductive process in a multicellular organism","type":"exact"}],"termid":"GO:0048609"}


id: PBO:0065454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 2","termid":"PBO:0065454"}


id: MONDO:0020117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"alpha granule disease","secondary_identifiers":["UMLS:C5681720","Orphanet:98455","icd11.foundation:237567451","GARD:19469","MEDGEN:1842309"],"termid":"MONDO:0020117","xrefs":{"Monarch":{"xref_id":"0020117"}}}


id: GO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. This reaction requires the binding of double-stranded RNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase activity","secondary_identifiers":["MetaCyc:RXN-13648","Reactome:R-HSA-8983680","EC:2.7.7.84","Reactome:R-HSA-8985104","RHEA:34407","Reactome:R-HSA-8985091"],"synonyms":[{"name":"(2-5')oligo(A) synthetase activity","type":"exact"},{"name":"2'-5' oligoadenylate synthetase activity","type":"exact"},{"name":"2-5A synthetase activity","type":"exact"},{"name":"oligo-2',5'-adenylate synthetase activity","type":"exact"}],"termid":"GO:0001730"}


id: PBO:0003315
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.4","termid":"PBO:0003315"}


id: PBO:0109034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 antisense RNA 1","termid":"PBO:0109034"}


id: GO:0032598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor into an immunological synapse.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor transport into membrane raft","termid":"GO:0032597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"B cell receptor transport into immunological synapse","synonyms":[{"name":"B cell receptor translocation into immunological synapse","type":"exact"},{"name":"BCR translocation into immunological synapse","type":"exact"},{"name":"BCR transport into immunological synapse","type":"exact"}],"termid":"GO:0032598"}


id: MONDO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the thyroid gland. This category includes Hashimoto thyroiditis, Riedel thyroiditis, acute thyroiditis, subacute thyroiditis, and radiation-induced thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis","secondary_identifiers":["DOID:7166","UMLS:C0040147","MESH:D013966","NCIT:C26894","icd11.foundation:587793334","HP:0100646","ICD9:245","MEDGEN:21548","ICD9:245.9","SCTID:82119001"],"synonyms":[{"name":"inflammation of thyroid gland","type":"exact"},{"name":"thyroid gland inflammation","type":"exact"},{"name":"thyroiditis","type":"exact"},{"name":"thyroiditis (disease)","type":"exact"}],"termid":"MONDO:0004126","xrefs":{"Monarch":{"xref_id":"0004126"}}}


id: GO:1904280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["PMID:24726328","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase V","synonyms":[{"name":"down regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"downregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"downregulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"inhibition of transcription from RNA pol V promoter","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904280"}


id: PBO:0005535
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SUP35","termid":"PBO:0005535"}


id: GO:0032201
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97515],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"The process in which telomeric DNA is synthesized semi-conservatively by the conventional replication machinery and telomeric accessory factors as part of cell cycle DNA replication.","definition_xrefs":["GOC:rl","PMID:16598261","GOC:vw","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-174417"],"synonyms":[{"name":"equal telomere replication","type":"related"},{"name":"telomeric fork progression","type":"narrow"},{"name":"telomeric replication fork progression","type":"narrow"}],"termid":"GO:0032201","terms_by_termid":{"GO:0032215":null}}


id: GO:0047326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:12717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 5-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855228","MetaCyc:2.7.1.140-RXN","KEGG_REACTION:R03478"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"ATP:1D-myo-inositol-1,3,4,6-tetrakisphosphate 5-phosphotransferase activity","type":"related"},{"name":"inositol 1,3,4,6-tetrakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 5-kinase activity","type":"broad"}],"termid":"GO:0047326"}


id: MONDO:1011146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondroplasia, non-human animal","termid":"MONDO:1010291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achondroplasia, water buffalo","secondary_identifiers":["OMIA:000004-89462"],"termid":"MONDO:1011146","xrefs":{"Monarch":{"xref_id":"1011146"}}}


id: GO:1905915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","PMID:25089138","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"}


id: PBO:0086862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF-ubiquitin ligase F-box protein; based on both genetic and physical interactions and sequence similarity; identified in association with Cdc53p, Skp1p and Ubi4 in large and small-scale studies","termid":"PBO:0086862"}


id: PATO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality that is relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pigmented","termid":"PATO:0002248"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pigmentation","synonyms":[{"name":"hyperpigmented","type":"exact"}],"termid":"PATO:0002250"}


id: MOD:00156
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to an L-2',4',5'-topaquinone.","definition_xrefs":["PubMed:1457410","PubMed:2111581","Unimod:392#Y","PubMed:1569055","ChEBI:21187","RESID:AA0147","PubMed:10387067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2',4',5'-topaquinone","synonyms":[{"name":"(2S)-2-amino-3-(5-hydroxy-2,5-cyclohexadien-1,4-dion-2-yl)propanoic acid","type":"exact"},{"name":"2,4,5-trihydroxyphenylalanine quinone","type":"exact"},{"name":"5-(2-carboxy-2-aminoethyl)-2-hydroxy-1,4-benzoquinone","type":"exact"},{"name":"L-2',4',5'-topaquinone","type":"exact"},{"name":"L-2,4,5-TOPAquinone","type":"exact"},{"name":"MOD_RES 2',4',5'-topaquinone","type":"exact"},{"name":"Quinone","type":"related"},{"name":"TPQ","type":"exact"},{"name":"TopaQ","type":"exact"},{"name":"quinone","type":"related"}],"termid":"MOD:00156"}


id: MOD:01147
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Hex)3-HexNAc-(dHex)HexNAc","termid":"MOD:01147"}


id: GO:0102238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-geraniol + ATP = (2E)-geranyl phosphate + ADP + H+.","definition_xrefs":["RHEA:61660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geraniol kinase activity","termid":"GO:0052670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP:geraniol kinase activity","secondary_identifiers":["MetaCyc:RXN-12307"],"synonyms":[{"name":"geraniol kinase activity (ATP-dependent) activity","type":"exact"}],"termid":"GO:0102238"}


id: GO:0050389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucurono-6,2-lactone + H2O = D-glucuronate.","definition_xrefs":["MetaCyc:URONOLACTONASE-RXN","EC:3.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"uronolactonase activity","secondary_identifiers":["RHEA:13337"],"synonyms":[{"name":"D-glucurono-6,2-lactone lactonohydrolase activity","type":"related"},{"name":"glucuronolactonase activity","type":"related"}],"termid":"GO:0050389"}


id: GO:0052161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of defense-related host cell wall thickening (obsolete GO:0052161)","synonyms":[{"name":"modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of host defensive cell wall thickening","type":"related"}],"termid":"GO:0052161"}


id: MONDO:1011107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephropathy in dogs in which the cause of the disease is a mutation in the COL4A4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nephropathy, dog","termid":"MONDO:1012186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, COL4A4-related, dog","secondary_identifiers":["OMIA:002618-9615"],"termid":"MONDO:1011107","xrefs":{"Monarch":{"xref_id":"1011107"}}}


id: GO:0033301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mitotic cell cycle in which mitosis is completed but cytokinesis does not occur, resulting in a cell containing multiple nuclei each with a chromosomal complement of the original ploidy (usually 2N).","definition_xrefs":["GOC:expert_vm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"}


id: GO:0140786
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113169],"is_not":false,"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of glutamine.","definition_xrefs":["PMID:34535752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"glutamine sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamine sensing activity","type":"exact"}],"termid":"GO:0140786","terms_by_termid":{"GO:0140786":null}}


id: PBO:0089936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A variant H2A.Z Pht1","termid":"PBO:0089936"}


id: GO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon.","definition_xrefs":["GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatodendritic compartment","termid":"GO:0036477"}


id: MONDO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the anal canal","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal canal cancer","secondary_identifiers":["SCTID:363352004","MEDGEN:509296","UMLS:C0153445","DOID:0050688","ICD9:154.2"],"synonyms":[{"name":"anal canal cancer","type":"exact"},{"name":"cancer of anal canal","type":"exact"},{"name":"malignant anal canal neoplasm","type":"exact"},{"name":"malignant neoplasm of anal canal","type":"exact"}],"termid":"MONDO:0000405","xrefs":{"Monarch":{"xref_id":"0000405"}}}


id: MONDO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interstitial 9q22.3 microdeletion is associated with a phenotype including macrocephaly, overgrowth and trigonocephaly. Psychomotor delay, hyperactivity and distinctive facial features were also observed. It has been described in two unrelated children.","definition_xrefs":["Orphanet:77301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 9q22.3","secondary_identifiers":["UMLS:C3711390","MEDGEN:777998","SCTID:724098008","MESH:C579873","GARD:18934"],"synonyms":[{"name":"microdeletion 9q22.3","type":"exact"}],"termid":"MONDO:0019179","xrefs":{"Monarch":{"xref_id":"0019179"}}}


id: PBO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase (predicted)","termid":"PBO:0001675"}


id: PBO:0064828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 8 pseudogene 1","termid":"PBO:0064828"}


id: PBO:0077388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 128","termid":"PBO:0077388"}


id: MONDO:0017930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed sclerosing bone dystrophy with extra-skeletal manifestations","secondary_identifiers":["UMLS:C5191052","Orphanet:324364","MEDGEN:1676501","GARD:21439"],"termid":"MONDO:0017930","xrefs":{"Monarch":{"xref_id":"0017930"}}}


id: PBO:0017996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amno acid transmembrane transporter Fnx2","termid":"PBO:0017996"}


id: FYPO:0002788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles during vegetative growth","synonyms":[{"name":"decreased vacuole size during vegetative growth","type":"exact"},{"name":"reduced vacuole size during vegetative growth","type":"exact"},{"name":"small vacuoles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002788"}


id: GO:2000338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"regulation of CXCL1 production","type":"exact"},{"name":"regulation of KC production","type":"exact"},{"name":"regulation of SCYB1 production","type":"exact"},{"name":"regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000338"}


id: PBO:0002747
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202 (predicted)","termid":"PBO:0002747"}


id: PBO:0082060
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase; multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway; mutation is functionally complemented by human HSD17B4","termid":"PBO:0082060"}


id: MONDO:0017357
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hyperammonemia of the newborn","secondary_identifiers":["GARD:21159","UMLS:C0268549","Orphanet:289877","MEDGEN:541358"],"termid":"MONDO:0017357","xrefs":{"Monarch":{"xref_id":"0017357"}}}


id: PBO:0085774
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII vesicles; proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p","termid":"PBO:0085774"}


id: PBO:0064663
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4F","termid":"PBO:0064663"}


id: GO:0009843
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id: GO:1900414
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id: PBO:0001261
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk13 (predicted)","termid":"PBO:0001261"}


id: GO:0100037
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates cellular alcohol catabolic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular alcohol catabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100037)","termid":"GO:0100037"}


id: PBO:0065353
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 3","termid":"PBO:0065353"}


id: GO:0140199
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071878"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0086023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0140199"}


id: GO:1990128
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication initiation at the origin of replication.","definition_xrefs":["PMID:21856207","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication initiation (obsolete GO:1990128)","synonyms":[{"name":"pre-primosome complex involved in replication initiation","type":"exact"}],"termid":"GO:1990128"}


id: PBO:0011136
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein Far11","termid":"PBO:0011136"}


id: PBO:0063303
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1C, pseudogene","termid":"PBO:0063303"}


id: GO:0042611
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC alpha chain and, in most cases, either an MHC class II beta chain or an invariant beta2-microglobin chain, and with or without a bound peptide, lipid, or polysaccharide antigen.","definition_xrefs":["PMID:15928678","GOC:add","GOC:jl","PMID:16153240","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC protein complex","termid":"GO:0042611"}


id: PR:Q09884
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id: GO:0046214
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id: GO:0055087
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id: GO:0033219
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id: MONDO:0020573
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disease susceptibility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:137259","UMLS:C0314657","ICD10CM:Z15"],"synonyms":[{"name":"genetic predisposition","type":"related"},{"name":"genetic predispositions","type":"related"},{"name":"genetic susceptibilities","type":"related"},{"name":"genetic susceptibility","type":"related"},{"name":"hereditary disease susceptibility","type":"exact"},{"name":"hereditary predisposition to disease","type":"exact"},{"name":"predisposition, genetic","type":"related"},{"name":"predispositions, genetic","type":"related"},{"name":"susceptibilities, genetic","type":"related"},{"name":"susceptibility, genetic","type":"related"}],"termid":"MONDO:0020573","terms_by_termid":{"MONDO:0000070":null,"MONDO:0007356":null,"MONDO:0007485":null,"MONDO:0007681":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007781":null,"MONDO:0007888":null,"MONDO:0008018":null,"MONDO:0008612":null,"MONDO:0009136":null,"MONDO:0009759":null,"MONDO:0010159":null,"MONDO:0010389":null,"MONDO:0010449":null,"MONDO:0010518":null,"MONDO:0010584":null,"MONDO:0010863":null,"MONDO:0010943":null,"MONDO:0011037":null,"MONDO:0011693":null,"MONDO:0011740":null,"MONDO:0011789":null,"MONDO:0011896":null,"MONDO:0012039":null,"MONDO:0012041":null,"MONDO:0012249":null,"MONDO:0012252":null,"MONDO:0012466":null,"MONDO:0012499":null,"MONDO:0012953":null,"MONDO:0012970":null,"MONDO:0013092":null,"MONDO:0013108":null,"MONDO:0013199":null,"MONDO:0013224":null,"MONDO:0013253":null,"MONDO:0013258":null,"MONDO:0013409":null,"MONDO:0013510":null,"MONDO:0013519":null,"MONDO:0013520":null,"MONDO:0013521":null,"MONDO:0013568":null,"MONDO:0013582":null,"MONDO:0013669":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0013806":null,"MONDO:0014038":null,"MONDO:0014041":null,"MONDO:0014056":null,"MONDO:0014151":null,"MONDO:0014368":null,"MONDO:0014494":null,"MONDO:0014600":null,"MONDO:0014630":null,"MONDO:0014690":null,"MONDO:0016368":null,"MONDO:0016369":null,"MONDO:0020715":null,"MONDO:0020722":null,"MONDO:0021024":null,"MONDO:0024498":null,"MONDO:0024517":null,"MONDO:0030334":null,"MONDO:0031057":null,"MONDO:0032742":null,"MONDO:0044300":null,"MONDO:0060671":null,"MONDO:0100003":null,"MONDO:0859346":null,"MONDO:0859376":null,"MONDO:0859575":null,"MONDO:0859576":null,"MONDO:0958013":null},"xrefs":{"Monarch":{"xref_id":"0020573"}}}


id: PR:Q12701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A STE20/SPS1-related proline-alanine-rich protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.15c","secondary_identifiers":["UniProtKB:Q12701"],"synonyms":[{"name":"Spom972h-STK39","type":"exact"}],"termid":"PR:Q12701"}


id: PR:Q9Y7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03309","PANTHER:PTHR11937:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein arp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.10","secondary_identifiers":["UniProtKB:Q9Y7X8"],"synonyms":[{"name":"Spom972h-ACTR5","type":"exact"}],"termid":"PR:Q9Y7X8"}


id: MONDO:0008215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult-onset autosomal dominant leukodystrophy (ADLD) is a rare slowly progressive neurological disorder involving centralnervous systemdemyelination, leading to autonomic dysfunction,ataxia and mild cognitive impairment.","definition_xrefs":["Orphanet:99027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 5","termid":"MONDO:0016956"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"adult-onset autosomal dominant demyelinating leukodystrophy","secondary_identifiers":["UMLS:C1868512","DECIPHER:59","SCTID:448054001","DOID:0060785","MEDGEN:356995","MESH:C566813","GARD:10587","OMIM:169500"],"synonyms":[{"name":"ADLD","type":"exact"},{"name":"Pelizaeus-Merzbacher disease, autosomal dominant or late-onset type","type":"related"},{"name":"Pelizaeus-Merzbacher disease, autosomal dominant or late-onset type, formerly","type":"related"},{"name":"adult-onset autosomal dominant demyelinating leukodystrophy","type":"exact"},{"name":"adult-onset autosomal dominant leukodystrophy","type":"exact"},{"name":"autosomal dominant adult-onset demyelinating leukodystrophy","type":"related"},{"name":"autosomal dominant leukodystrophy with autonomic disease","type":"related"},{"name":"autosomal-dominant or late-onset type Pelizaeus-Merzbacher disease","type":"exact"},{"name":"leukodystrophy, adult-onset, autosomal dominant","type":"exact"},{"name":"leukodystrophy, demyelinating, ADULT-onset, autosomal dominant","type":"related"},{"name":"multiple sclerosis-like disorder","type":"related"}],"termid":"MONDO:0008215","xrefs":{"Monarch":{"xref_id":"0008215"}}}


id: FYPO:0000283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype in which chromosomes are broken during mitotic chromosome segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000641","FYPO:0001985","FYPO:0000707","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0000654","FYPO:0000631","FYPO:0000652","FYPO:0001320"],"is_obsolete":false,"name":"mitotic chromosome fragmentation upon segregation","synonyms":[{"name":"chromosome fragmentation upon mitotic chromosome segregation","type":"exact"},{"name":"chromosome fragmentation upon segregation during mitosis","type":"exact"},{"name":"chromosome fragmentation upon segregation during mitotic cell cycle","type":"exact"},{"name":"chromosome fragmentation upon segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome fragmentation","type":"exact"},{"name":"fragmented mitotic chromosomes upon segregation","type":"exact"}],"termid":"FYPO:0000283"}


id: MONDO:1011499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, cattle","termid":"MONDO:1010751"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, cattle","secondary_identifiers":["OMIA:002082-9913"],"termid":"MONDO:1011499","xrefs":{"Monarch":{"xref_id":"1011499"}}}


id: MONDO:0000387
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Anemia in which the circulating RBCs are smaller than the usual size of RBCs (microcytic) and have decreased red color (hypochromic).","direct_ancestors":[{"relation_name":"is_a","term_name":"microcytic anemia","termid":"MONDO:0001245"},{"relation_name":"is_a","term_name":"hypochromic anemia","termid":"MONDO:0001357"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hypochromic microcytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050642","HP:0004840","MEDGEN:124413","UMLS:C0271901","SCTID:44666001","MESH:C536357"],"synonyms":[{"name":"hypochromic microcytic anaemia (disease)","type":"exact"},{"name":"hypochromic microcytic anemia","type":"exact"},{"name":"hypochromic microcytic anemia (disease)","type":"exact"}],"termid":"MONDO:0000387","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0000387"}}}


id: PBO:0086299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in transcriptional silencing; required for normal transcription at several loci including HTA2-HTB2 and HHF2-HHT2, but not required at the other histone loci; binds with Spt10p to histone gene promoters during S phase; localizes to nuclear foci that become diffuse upon DNA replication stress","termid":"PBO:0086299"}


id: PR:Q10362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.11c","synonyms":[{"name":"Spom972h-set3","type":"exact"}],"termid":"PR:Q10362"}


id: PBO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A1","termid":"PBO:0047769"}


id: GO:1990561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of copper ions.","definition_xrefs":["PMID:10593913","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to copper ion starvation (obsolete GO:1990561)","termid":"GO:1990561"}


id: PBO:0029572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_population_(obsolete_FYPO:0002149)","termid":"PBO:0029572"}


id: GO:1904789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring maintenance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24115772"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring maintenance (obsolete GO:1904789)","synonyms":[{"name":"regulation of contractile ring maintenance involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of cytokinesis, contractile ring maintenance, involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1904789"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: GO:0070180
data:
  {"annotated_genes":["SJAG_05248","SJAG_03297","SJAG_01087","SJAG_02535","SJAG_03197","SJAG_00315","SJAG_04847"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70636,71578,74789,75199,76997,80422,114787],"is_not":false,"summary":null,"term":"GO:0070180"}]},"cv_name":"molecular_function","definition":"Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00315":null,"SJAG_01087":null,"SJAG_02535":null,"SJAG_03197":null,"SJAG_03297":null,"SJAG_04847":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"large ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"25S rRNA binding","type":"exact"},{"name":"LSU rRNA binding","type":"exact"}],"termid":"GO:0070180","terms_by_termid":{"GO:0070180":null}}


id: PBO:0056210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B5","termid":"PBO:0056210"}


id: PBO:0071797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P RNA component H1","termid":"PBO:0071797"}


id: GO:0009289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.","definition_xrefs":["PMID:28496159","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pilus","secondary_identifiers":["Wikipedia:Pilus"],"synonyms":[{"name":"fimbria","type":"exact"},{"name":"fimbriae","type":"exact"},{"name":"fimbrium","type":"exact"},{"name":"pili","type":"exact"}],"termid":"GO:0009289"}


id: MONDO:0100223
data:
  {"annotated_genes":["SJAG_03782","SJAG_04639","SJAG_00217","SJAG_01368","SJAG_01820"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032617"},{"annotations":[86605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032630"},{"annotations":[86607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032631"},{"annotations":[86593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032609"},{"annotations":[86596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032612"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency","termid":"MONDO:0100133"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_01368":null,"SJAG_01820":null,"SJAG_03782":null,"SJAG_04639":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex I deficiency, nuclear type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:252010","DOID:0112065"],"termid":"MONDO:0100223","terms_by_termid":{"MONDO:0032609":null,"MONDO:0032612":null,"MONDO:0032617":null,"MONDO:0032630":null,"MONDO:0032631":null},"xrefs":{"Monarch":{"xref_id":"0100223"}}}


id: PBO:0063600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 12 pseudogene 1","termid":"PBO:0063600"}


id: PBO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031448"}


id: MONDO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent proptosis","secondary_identifiers":["ICD9:376.34","DOID:12363","MEDGEN:509886","SCTID:49774006","UMLS:C0155270"],"synonyms":[{"name":"intermittent exophthalmos","type":"exact"}],"termid":"MONDO:0001512","xrefs":{"Monarch":{"xref_id":"0001512"}}}


id: PATO:0000547
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's exhibiting photosensitivity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitive","termid":"PATO:0000547"}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: GO:0005696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of DNA and protein that seals the end of a chromosome. The telomeric DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA.","definition_xrefs":["ISBN:0198506732","PMID:11352055"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere (obsolete GO:0005696)","synonyms":[{"name":"telomere","type":"exact"}],"termid":"GO:0005696"}


id: PBO:0053973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1284","termid":"PBO:0053973"}


id: MONDO:0005631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Actinomycosis is a chronic bacterial infection that commonly affects the face and neck. It is usually caused by an anaerobic bacteria called Actinomyces israelii. Actinomyces are normal inhabitants of the mouth, gastrointestinal tract, and female genital tract, and do not cause an infection unless there is a break in the skin or mucosa. The infection usually occurs in the face and neck, but can sometimes occur in the chest, abdomen, pelvis, or other areas of the body. The infection is not contagious.","direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"Actinomycetales infectious disease","termid":"MONDO:0006921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinomycosis","secondary_identifiers":["EFO:0007128","DOID:8478","GARD:5728","icd11.foundation:1697630330","ICD9:039.9","MESH:D000196","NCIT:C34350","Orphanet:457095","ICD9:039","MEDGEN:1733","SCTID:11817007","UMLS:C0001261"],"synonyms":[{"name":"Actinomyces infection","type":"exact"},{"name":"Actinomyces israeli","type":"related"},{"name":"Actinomycetes","type":"related"},{"name":"Keratoactinomycosis","type":"related"},{"name":"Madura foot due to Actinomadura","type":"exact"},{"name":"actinomycetoma","type":"related"},{"name":"actinomycotic madura foot","type":"exact"},{"name":"actinomycotic mycetema","type":"exact"},{"name":"actinomycotic mycetoma of foot","type":"exact"},{"name":"anaerobic Actinomyces infection","type":"related"},{"name":"boil","type":"related"},{"name":"canaliculitis","type":"related"},{"name":"infections, Actinomyces","type":"related"}],"termid":"MONDO:0005631","xrefs":{"Monarch":{"xref_id":"0005631"}}}


id: PBO:0048233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2D","termid":"PBO:0048233"}


id: PBO:0069175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 429, pseudogene","termid":"PBO:0069175"}


id: MONDO:1011513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, Japanese quail","secondary_identifiers":["OMIA:000411-93934"],"termid":"MONDO:1011513","xrefs":{"Monarch":{"xref_id":"1011513"}}}


id: PBO:0005534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor class II eRF3","termid":"PBO:0005534"}


id: PBO:0076981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase 1, pseudogene","termid":"PBO:0076981"}


id: PBO:0060958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor epsilon","termid":"PBO:0060958"}


id: PBO:0059310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 1","termid":"PBO:0059310"}


id: PBO:0111352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp13","termid":"PBO:0111352"}


id: GO:0046177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete D-gluconate catabolic process (obsolete GO:0046177)","synonyms":[{"name":"D-gluconate breakdown","type":"exact"},{"name":"D-gluconate catabolism","type":"exact"},{"name":"D-gluconate degradation","type":"exact"}],"termid":"GO:0046177"}


id: PBO:0035697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within","termid":"PBO:0035697"}


id: GO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The adenylylation of peptidyl-threonine to form peptidyl-O-(phospho-5'-adenosine)-L-threonine.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine adenylylation (obsolete GO:0018178)","synonyms":[{"name":"peptidyl-threonine adenylation","type":"exact"}],"termid":"GO:0018178"}


id: PBO:0087251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; associates with TORC1 and likely involved in TOR signaling cascades; negative regulator of autophagy; nuclear translocation required for haploid filamentous growth; regulates filamentous growth induced nuclear translocation of Bcy1p, Fus3p, and Sks1p; overproduction causes allele-specific suppression of prp20-10; protein abundance increases in response to DNA replication stress","termid":"PBO:0087251"}


id: SO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of seven nucleotide bases in tRNA which contains the anticodon. It has the sequence 5'-pyrimidine-purine-anticodon-modified purine-any base-3.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon_loop","synonyms":[{"name":"anti-codon loop","type":"exact"},{"name":"anticodon loop","type":"exact"}],"termid":"SO:0001173"}


id: FYPO:0001969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on papulacandin B","termid":"FYPO:0001969"}


id: PBO:0089375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic10","termid":"PBO:0089375"}


id: PBO:0078604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 17","termid":"PBO:0078604"}


id: GO:0062027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032436"},{"relation_name":"is_a","term_name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"},{"relation_name":"positively_regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process","termid":"GO:0062027"}


id: RO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of derived by descent from","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_derived_by_descendant","termid":"RO:0002157"}


id: PATO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Increased, intensified.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001589 enhanced (obsolete PATO:0001589)","termid":"PATO:0001589"}


id: PBO:0058991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motilin receptor","termid":"PBO:0058991"}


id: PBO:0077678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 9","termid":"PBO:0077678"}


id: GO:0002542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates Factor XII (Hageman factor). Factor XII is a protein synthesized by the liver that circulates in an inactive form until it encounters collagen or basement membrane or activated platelets (as occurs at the site of endothelial injury). Factor XII then undergoes a conformational change (becoming factor XIIa), exposing an active serine center that can subsequently cleave protein substrates and activate a variety of mediator systems. Factor XII is a participant in the clotting cascade as well as the kinin cascade.","definition_xrefs":["GOC:jal","ISBN:0721601871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"part_of","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"},{"relation_name":"positively_regulates","term_name":"activation of plasma proteins involved in acute inflammatory response","termid":"GO:0002541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Factor XII activation","synonyms":[{"name":"Hageman factor activation","type":"exact"}],"termid":"GO:0002542"}


id: GO:0050775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite morphogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of dendrite morphogenesis","termid":"GO:0048814"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"positively_regulates","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite morphogenesis","synonyms":[{"name":"activation of dendrite morphogenesis","type":"narrow"},{"name":"stimulation of dendrite morphogenesis","type":"narrow"},{"name":"up regulation of dendrite morphogenesis","type":"exact"},{"name":"up-regulation of dendrite morphogenesis","type":"exact"},{"name":"upregulation of dendrite morphogenesis","type":"exact"}],"termid":"GO:0050775"}


id: PBO:0079720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 7","termid":"PBO:0079720"}


id: MONDO:0700125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 18 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 disorder","termid":"MONDO:0700125","xrefs":{"Monarch":{"xref_id":"0700125"}}}


id: PBO:0085282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane signal receptor for peroxisomal matrix proteins; oleate-inducible condition-specific import receptor for a subset of PTS1-containing matrix proteins; localizes to both the cytosol and the peroxisomal membrane; similar to human PEX5Rp, a peroxin protein 5 related protein; paralog of Pex5p","termid":"PBO:0085282"}


id: PBO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 1","termid":"PBO:0061309"}


id: PBO:0078822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-5","termid":"PBO:0078822"}


id: MOD:02059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-valine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-valine residue","synonyms":[{"name":"XlnkVal","type":"exact"}],"termid":"MOD:02059"}


id: PBO:0012831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp40","termid":"PBO:0012831"}


id: PBO:0077979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 2-1","termid":"PBO:0077979"}


id: PBO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 83 pseudogene","termid":"PBO:0070169"}


id: PBO:0039952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C","termid":"PBO:0039952"}


id: PBO:0059474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3 pseudogene 1","termid":"PBO:0059474"}


id: PBO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome","termid":"PBO:0003796"}


id: GO:0140501
data:
  {"annotated_genes":["SJAG_04435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89862],"is_not":false,"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of reticulophagy.","definition_xrefs":["PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of reticulophagy","termid":"GO:0140500"},{"relation_name":"positively_regulates","term_name":"reticulophagy","termid":"GO:0061709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of reticulophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ER autophagy","type":"exact"},{"name":"positive regulation of ER degradation","type":"related"},{"name":"positive regulation of ER-phagy","type":"exact"},{"name":"positive regulation of autophagy of the ER","type":"exact"},{"name":"positive regulation of autophagy of the endoplasmic reticulum","type":"exact"},{"name":"positive regulation of endoplasmic reticulum autophagy","type":"exact"},{"name":"positive regulation of endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0140501","terms_by_termid":{"GO:0140501":null}}


id: PBO:0012535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_acquisition_of_features_of","termid":"PBO:0012535"}


id: PBO:0041875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic arginine sensor for mTORC1 subunit 2","termid":"PBO:0041875"}


id: MONDO:0020582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the uterine ligament.","definition_xrefs":["NCIT:C126493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system benign neoplasm","termid":"MONDO:0000636"},{"relation_name":"is_a","term_name":"cervical benign neoplasm","termid":"MONDO:0000644"},{"relation_name":"is_a","term_name":"uterine ligament neoplasm","termid":"MONDO:0021629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign uterine ligament neoplasm","secondary_identifiers":["MEDGEN:923071","UMLS:C0865093"],"synonyms":[{"name":"benign uterine ligament neoplasm","type":"exact"}],"termid":"MONDO:0020582","xrefs":{"Monarch":{"xref_id":"0020582"}}}


id: MONDO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A molecular subtype of glioblastoma characterized by the presence of NF1 mutations.","definition_xrefs":["NCIT:C111695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblastoma","termid":"MONDO:0018177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mesenchymal glioblastoma","secondary_identifiers":["UMLS:C3829122","DOID:0050805","MEDGEN:821870"],"synonyms":[{"name":"glioblastoma mesenchymal subtype","type":"related"},{"name":"mesenchymal glioblastoma","type":"exact"}],"termid":"MONDO:0000459","xrefs":{"Monarch":{"xref_id":"0000459"}}}


id: PBO:0055258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2685","termid":"PBO:0055258"}


id: MONDO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma characterized by a plexiform or multinodular growth pattern. It usually arises from the skin or subcutaneous tissues in the extremities, trunk, and head and neck.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexiform schwannoma","secondary_identifiers":["NCIT:C6969","MEDGEN:277972","SCTID:404025004","ICD9:215.9","UMLS:C1370659","DOID:3206"],"synonyms":[{"name":"plexiform neurilemmoma","type":"exact"},{"name":"plexiform neurinoma","type":"exact"},{"name":"plexiform schwannoma","type":"exact"},{"name":"plexiform schwannoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002559","xrefs":{"Monarch":{"xref_id":"0002559"}}}


id: MONDO:0016233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare lymphatic system malformation (obsolete MONDO:0016233)","secondary_identifiers":["NANDO:1200881","Orphanet:211255"],"termid":"MONDO:0016233","xrefs":{"Monarch":{"xref_id":"0016233"}}}


id: MONDO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"occipital encephalocele","secondary_identifiers":["UMLS:C0014067","GARD:20969","MEDGEN:4935","Orphanet:268823","ICD10CM:Q01.2","SCTID:42376006","icd11.foundation:1075031814"],"termid":"MONDO:0017080","xrefs":{"Monarch":{"xref_id":"0017080"}}}


id: MONDO:0958018
data:
  {"annotated_genes":["SJAG_03144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86451],"is_not":false,"summary":null,"term":"MONDO:0958018"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882743","MEDGEN:1844996","OMIM:620675"],"termid":"MONDO:0958018","terms_by_termid":{"MONDO:0958018":null},"xrefs":{"Monarch":{"xref_id":"0958018"}}}


id: GO:0110161
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111744],"is_not":false,"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"positive regulation of spindle assembly","termid":"GO:1905832"},{"relation_name":"positively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110161","terms_by_termid":{"GO:0110161":null}}


id: GO:0071064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaE-beta7 integrin complex bound to E-cadherin.","definition_xrefs":["PMID:10837471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaE-beta7 integrin-E-cadherin complex","synonyms":[{"name":"ITGAE-ITGB7-CDH1 complex","type":"narrow"}],"termid":"GO:0071064"}


id: PBO:0058006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3929","termid":"PBO:0058006"}


id: PBO:0088949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fyv7","termid":"PBO:0088949"}


id: MONDO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by a predominant immature erythroid population. There are two subtypes recognized: erythroleukemia and pure erythroid leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C8923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"},{"relation_name":"is_a","term_name":"erythroid neoplasm","termid":"MONDO:0020703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute erythroid leukemia","secondary_identifiers":["MEDGEN:7316","GARD:9620","MESH:D004915","DOID:0080780","EFO:0000218","NANDO:2200010","UMLS:C0023440","ICD9:207.00","icd11.foundation:631263622","ICD9:205.80","SCTID:93451002","icd11.foundation:538743484","ICDO:9840/3","Orphanet:318"],"synonyms":[{"name":"AEL","type":"exact"},{"name":"AML M6","type":"exact"},{"name":"AML-M6","type":"related"},{"name":"Di Guglielmo syndrome","type":"related"},{"name":"Di Guglielmo's syndrome","type":"related"},{"name":"Erythroleukemia","type":"related"},{"name":"FAB M6","type":"exact"},{"name":"M6 acute myeloid leukaemia","type":"exact"},{"name":"M6 acute myeloid leukemia","type":"exact"},{"name":"acute erythroblastic leukaemia","type":"exact"},{"name":"acute erythroblastic leukemia","type":"exact"},{"name":"acute erythroid leukemia","type":"exact"},{"name":"acute erythroleukemia","type":"related"},{"name":"acute erythroleukemia M6a subtype","type":"related"},{"name":"acute erythroleukemia M6b subtype","type":"related"},{"name":"acute myeloid leukaemia FAB-M6","type":"related"},{"name":"acute myeloid leukaemia M6","type":"exact"},{"name":"acute myeloid leukemia FAB-M6","type":"related"},{"name":"acute myeloid leukemia M6","type":"exact"},{"name":"erythroblastic leukaemia","type":"exact"},{"name":"erythroblastic leukemia","type":"exact"},{"name":"leukemia, erythroid, malignant","type":"exact"}],"termid":"MONDO:0017858","xrefs":{"Monarch":{"xref_id":"0017858"}}}


id: PBO:0047791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box E3","termid":"PBO:0047791"}


id: PBO:0031509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0031509"}


id: PBO:0038362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_necessary_component_activity","termid":"PBO:0038362"}


id: PR:O14197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5D6.04 gene.","definition_xrefs":["UniProtKB:O14197","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C5D6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.04","synonyms":[{"name":"Spom972h-SPAC5D6.04","type":"exact"}],"termid":"PR:O14197"}


id: GO:1902748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:17592637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lens fiber cell differentiation","termid":"GO:1902746"},{"relation_name":"positively_regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens fiber cell differentiation","synonyms":[{"name":"activation of lens fiber cell differentiation","type":"narrow"},{"name":"activation of lens fibre cell differentiation","type":"narrow"},{"name":"positive regulation of lens fibre cell differentiation","type":"exact"},{"name":"up regulation of lens fiber cell differentiation","type":"exact"},{"name":"up regulation of lens fibre cell differentiation","type":"exact"},{"name":"up-regulation of lens fiber cell differentiation","type":"exact"},{"name":"up-regulation of lens fibre cell differentiation","type":"exact"},{"name":"upregulation of lens fiber cell differentiation","type":"exact"},{"name":"upregulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902748"}


id: PR:P41831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4A8.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.14","synonyms":[{"name":"Spom972h-SPAC4A8.14","type":"exact"},{"name":"phosphoribosyl pyrophosphate synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41831"}


id: GO:0102748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + geranylgeranyl-chlorophyll a + NADPH = dihydrogeranylgeranyl-chlorophyll a + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102748)","termid":"GO:0102748"}


id: FYPO:0006507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which duplication of DNA sequences in the subtelomeric region occur more frequently than in wild type cells during G0 phase.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased subtelomeric DNA amplification during G0","synonyms":[{"name":"increased occurrence of subtelomeric DNA amplification during G0","type":"exact"},{"name":"increased subtelomeric DNA amplification during cell quiescence","type":"exact"},{"name":"increased subtelomeric DNA amplification during quiescence","type":"exact"},{"name":"increased subtelomeric DNA sequence duplication during G0","type":"exact"},{"name":"increased subtelomeric amplification during G0","type":"exact"}],"termid":"FYPO:0006507"}


id: MONDO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urinary system cancer (obsolete MONDO:0002827)","termid":"MONDO:0002827","xrefs":{"Monarch":{"xref_id":"0002827"}}}


id: PBO:0030842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_caffeine","termid":"PBO:0030842"}


id: MONDO:0007620
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87302],"is_not":false,"summary":null,"term":"MONDO:0007620"}]},"cv_name":"mondo","definition":"Fish eye disease (FED) is a form of genetic LCAT (lecithin-cholesterol acyltransferase) deficiency characterized clinically by corneal opacifications, and biochemically by significantly reduced HDL cholesterol and partial LCAT enzyme deficiency.","definition_xrefs":["Orphanet:79292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LCAT deficiency","termid":"MONDO:0018999"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"fish eye disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:83354","OMIM:136120","SCTID:238092004","UMLS:C0342895","GARD:6450"],"synonyms":[{"name":"FED","type":"exact"},{"name":"LCATA deficiency","type":"related"},{"name":"alpha-LCAT deficiency","type":"related"},{"name":"alpha-lecithin cholesterol acyltransferase deficiency","type":"related"},{"name":"alpha-lecithin:cholesterol acyltransferase deficiency","type":"related"},{"name":"dyslipoproteinemic corneal dystrophy","type":"related"},{"name":"fed","type":"exact"},{"name":"fish eye disease","type":"exact"},{"name":"fish-eye disease","type":"related"},{"name":"partial LCAT deficiency","type":"exact"}],"termid":"MONDO:0007620","terms_by_termid":{"MONDO:0007620":null},"xrefs":{"Monarch":{"xref_id":"0007620"}}}


id: RO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between protein a (a transcription factor) and DNA element b if and only if a activates the process of transcription of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_positively_regulates_activity_of","termid":"RO:0002450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increases_expression_of","termid":"RO:0003003"}


id: GO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chloroplast-derived plastid in which the solid form of phenol is stored.","definition_xrefs":["PMID:24683183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phenyloplast","termid":"GO:0062116"}


id: PBO:0112790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, phosphate quality regulator Pqr1/Spx1","termid":"PBO:0112790"}


id: PBO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L1","termid":"PBO:0042213"}


id: PBO:0003035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene transporter","termid":"PBO:0003035"}


id: PBO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-24 (pseudogene)","termid":"PBO:0051439"}


id: MONDO:0016143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoglycanopathy","termid":"MONDO:0016140"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of gamma-sarcoglycan","secondary_identifiers":["MEDGEN:1842385","GARD:20392","Orphanet:207067","UMLS:C5680805"],"synonyms":[{"name":"gamma-sarcoglycanopathy","type":"narrow"}],"termid":"MONDO:0016143","xrefs":{"Monarch":{"xref_id":"0016143"}}}


id: MONDO:1012093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephropathy, non-human animal","termid":"MONDO:1011905"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomerulonephropathy, dog","secondary_identifiers":["OMIA:000414-9615"],"termid":"MONDO:1012093","xrefs":{"Monarch":{"xref_id":"1012093"}}}


id: PBO:0074901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74","termid":"PBO:0074901"}


id: MONDO:0015796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of lung damage that is characterized by bilateral pulmonary infiltrates (pulmonary edema) rich in neutrophils, and in the absence of clinical heart failure. This can represent a spectrum of pulmonary lesions, endothelial and epithelial, due to numerous factors (physical, chemical, or biological).","definition_xrefs":["MESH:D055371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute lung injury","secondary_identifiers":["EFO:0004610","MedDRA:10069351","GARD:20146","NCIT:C155766","Orphanet:178320","SCTID:315345002"],"termid":"MONDO:0015796","xrefs":{"Monarch":{"xref_id":"0015796"}}}


id: GO:0031883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a taste receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"taste receptor binding","synonyms":[{"name":"taste receptor ligand","type":"narrow"}],"termid":"GO:0031883"}


id: GO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of rapid eye movement (REM) sleep.","definition_xrefs":["GOC:jl","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, REM sleep","termid":"GO:0042320"},{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, REM sleep","type":"narrow"},{"name":"negative regulation of REM sleep","type":"exact"}],"termid":"GO:0042322"}


id: PBO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex subunit Eaf6 (predicted)","termid":"PBO:0001709"}


id: PBO:0049894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 4","termid":"PBO:0049894"}


id: GO:0035811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urine volume","synonyms":[{"name":"antidiuresis","type":"broad"},{"name":"decrease in urine flow","type":"exact"},{"name":"reduction of urinary volume","type":"exact"}],"termid":"GO:0035811"}


id: GO:0030772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + L-tryptophan = S-adenosyl-L-homocysteine + L-2-methyltryptophan + H+.","definition_xrefs":["EC:2.1.1.106","RHEA:17321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tryptophan 2-C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R08547","MetaCyc:RXN-16751"],"synonyms":[{"name":"S-adenosyl-L-methionine:L-tryptophan 2-C-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:tryptophan 2-methyltransferase activity","type":"related"},{"name":"tryptophan 2-methyltransferase activity","type":"related"}],"termid":"GO:0030772"}


id: MOD:01956
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to (3R)-3-hydroxy-L-arginine.","definition_xrefs":["RESID:AA0601","PubMed:786730","PubMed:23103944","PubMed:10094780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(3R)-3-hydroxy-L-arginine","synonyms":[{"name":"(2S,3R)-2-amino-5-[(diaminomethylidene)amino]-3-hydroxypentanoic acid","type":"exact"},{"name":"(3R)-3-hydroxy-L-arginine","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-3-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-3-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-3-hydroxypentanoic acid","type":"exact"},{"name":"C(beta)-hydroxyarginine","type":"exact"},{"name":"MOD_RES (3R)-3-hydroxyarginine","type":"exact"},{"name":"beta-hydroxyarginine","type":"exact"}],"termid":"MOD:01956"}


id: PBO:0063469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit alpha 2","termid":"PBO:0063469"}


id: PBO:0082412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase; formaldehyde dehydrogenase activity is glutathione-dependent; functions in formaldehyde detoxification and formation of long chain and complex alcohols, regulated by Hog1p-Sko1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082412"}


id: MONDO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the cerebral cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral cortex disorder","secondary_identifiers":["SCTID:128128003","UMLS:C1263847","MEDGEN:688117"],"synonyms":[{"name":"cerebral cortex disease","type":"exact"},{"name":"cerebral cortex disease or disorder","type":"exact"},{"name":"disease of cerebral cortex","type":"exact"},{"name":"disease or disorder of cerebral cortex","type":"exact"},{"name":"disorder of cerebral cortex","type":"exact"}],"termid":"MONDO:0044996","xrefs":{"Monarch":{"xref_id":"0044996"}}}


id: SO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The helix has 3.6 residues per turn which corresponds to a translation of 1.5 angstroms (= 0.15 nm) along the helical axis. Every backbone N-H group donates a hydrogen bond to the backbone C=O group of the amino acid four residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"alpha_helix","secondary_identifiers":["http://en.wikipedia.org/wiki/Alpha_helix","BS:00040"],"synonyms":[{"name":"a-helix","type":"related"},{"name":"helix","type":"related"}],"termid":"SO:0001117"}


id: FYPO:0004973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere localization, a process in which a telomere is transported to, and/or maintained in, a specific location, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere localization","synonyms":[{"name":"normal telomere localisation","type":"exact"}],"termid":"FYPO:0004973"}


id: PBO:0087618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the conserved chromosomal passenger complex (CPC); complex regulates mitotic chromosome segregation; not required for the kinase activity of the complex; mediates the interaction of Sli15p and Bir1p; other complex members are Ipl1p, Sli15p, and Bir1p","termid":"PBO:0087618"}


id: PR:P87124
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A12.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3A12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.08","synonyms":[{"name":"Spom972h-SPAC3A12.08","type":"exact"}],"termid":"PR:P87124"}


id: PBO:0058545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6124","termid":"PBO:0058545"}


id: MONDO:0020611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--kell system (obsolete MONDO:0020611)","secondary_identifiers":["OMIM:110900"],"synonyms":[{"name":"BLOOD GROUP--KELL SYSTEM","type":"related"},{"name":"Blood Group--Kell-Cellano System","type":"related"},{"name":"K(0)","type":"related"},{"name":"KEL","type":"related"},{"name":"Kell-Null","type":"related"},{"name":"Ko","type":"related"},{"name":"blood group, Kell","type":"exact"}],"termid":"MONDO:0020611","xrefs":{"Monarch":{"xref_id":"0020611"}}}


id: PBO:0028262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_arginine_and_cysteine","termid":"PBO:0028262"}


id: GO:0005354
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110960],"is_not":false,"summary":null,"term":"GO:0005354"}]},"cv_name":"molecular_function","definition":"Enables the transfer of galactose from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"galactose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"}],"termid":"GO:0005354","terms_by_termid":{"GO:0005354":null}}


id: PBO:0048485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinal center associated signaling and motility","termid":"PBO:0048485"}


id: PBO:0062898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoeicosanoid receptor 1","termid":"PBO:0062898"}


id: PBO:0076120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 4","termid":"PBO:0076120"}


id: PBO:0003951
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of APC complex","termid":"PBO:0003951"}


id: SO:1000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant affects the stability of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000082 sequence variant_affecting_transcript_stability (obsolete SO:1000082)","synonyms":[{"name":"mutation affecting transcript stability","type":"related"},{"name":"sequence variant affecting transcript stability","type":"exact"}],"termid":"SO:1000082"}


id: GO:0048679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon regeneration.","definition_xrefs":["GOC:dph","GOC:jid","GOC:lm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon regeneration","termid":"GO:0048679"}


id: PATO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"semi-fertile","termid":"PATO:0001767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female semi-fertile","termid":"PATO:0001760"}


id: PBO:0090944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp11","termid":"PBO:0090944"}


id: FYPO:0003196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to iron ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"altered RNA level during cellular response to iron ion starvation","synonyms":[{"name":"abnormal RNA level during cellular response to iron ion starvation","type":"exact"},{"name":"altered RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during cellular response to iron starvation","type":"exact"},{"name":"altered RNA level during iron starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to iron ion starvation","type":"exact"},{"name":"altered transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0003196"}


