# terms

id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: MONDO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A concretion in the prostate.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"},{"relation_name":"is_a","term_name":"lower urinary tract calculus","termid":"MONDO:0004828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate calculus","secondary_identifiers":["SCTID:85324003","UMLS:C0149525","MEDGEN:57431","DOID:13689","ICD10CM:N42.0","ICD9:602.0"],"synonyms":[{"name":"Stone of prostate","type":"exact"},{"name":"calculus of prostate","type":"exact"},{"name":"lower urinary tract calculus of prostate gland","type":"exact"},{"name":"prostate gland lower urinary tract calculus","type":"exact"},{"name":"prostatic lithiasis","type":"exact"},{"name":"prostatic stone","type":"exact"}],"termid":"MONDO:0001776","xrefs":{"Monarch":{"xref_id":"0001776"}}}


id: PBO:0090914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Sak1","termid":"PBO:0090914"}


id: PATO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's passing into solution.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissolved","termid":"PATO:0001986"}


id: MONDO:0020008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare immune system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare immune disease (obsolete MONDO:0020008)","secondary_identifiers":["Orphanet:98004"],"synonyms":[{"name":"rare immune system disease","type":"exact"}],"termid":"MONDO:0020008","xrefs":{"Monarch":{"xref_id":"0020008"}}}


id: FYPO:0005790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"J\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"J-shaped vegetative cell","synonyms":[{"name":"J-shaped cell","type":"exact"},{"name":"J-shaped cell during vegetative growth","type":"exact"},{"name":"J-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, J-shaped","type":"exact"}],"termid":"FYPO:0005790"}


id: PBO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERRFI1 divergent transcript","termid":"PBO:0046533"}


id: PBO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 1","termid":"PBO:0048630"}


id: PBO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 23","termid":"PBO:0046642"}


id: PBO:0061823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 13 Y-linked","termid":"PBO:0061823"}


id: GO:0043823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spheroidene + O2 = spheroidenone + H2O.","definition_xrefs":["PMID:16158287","PMID:16086104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"spheroidene monooxygenase activity","secondary_identifiers":["EC:1.14.15.9","MetaCyc:RXN-10670","RHEA:33027"],"termid":"GO:0043823"}


id: PBO:0040736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 2","termid":"PBO:0040736"}


id: PBO:0055919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A7, pseudogene","termid":"PBO:0055919"}


id: PBO:0084921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monoacylglycerol and triacylglycerol lipase; MAG lipase with preference for palmitoyl-MAG; TAG lipase involved in TAG catabolism; minor role in medium-chain fatty acid ethyl ester biosynthesis; contains an alpha/beta hydrolase domain and a typical lipase motif (GXSXG); similar to acyltransferases, Eeb1p, Eht1p, and human ABHD1","termid":"PBO:0084921"}


id: MONDO:0012915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 1q21.1 duplication syndrome is a rare condition caused by the presence of an extra copy of a small piece of chromosome 1 in the cells of the body. Signs and symptoms can vary widely among affected individuals. Some individuals have no symptoms, while others may have features such as a large head size (macrocephaly); mild to moderate developmental delay and learning difficulties; autism or autistic-like behavior; heart problems; seizures; and/or and distinctive facial features. This condition can occur sporadically as a de novo mutation (by chance) or can be inherited in an autosomal dominant manner from a parent. Treatment depends on the signs and symptoms present in each individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 1","termid":"MONDO:0016952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1q21.1 duplication syndrome","secondary_identifiers":["DOID:0060435","GARD:10591","DECIPHER:67","MEDGEN:382715","MESH:C567290","OMIM:612475","UMLS:C2675891","Orphanet:250994"],"synonyms":[{"name":"1q21.1 microduplication syndrome","type":"exact"},{"name":"1q21.1 recurrent microduplication (possible susceptibility locus for neurodevelopmental disorders)","type":"exact"},{"name":"chromosome 1q21.1 duplication syndrome","type":"exact"},{"name":"chromosome 1q21.1 duplication syndrome, isolated cases","type":"exact"},{"name":"dup(1)(q21.1)","type":"exact"},{"name":"trisomy 1q21.1","type":"exact"}],"termid":"MONDO:0012915","xrefs":{"Monarch":{"xref_id":"0012915"}}}


id: PBO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 2","termid":"PBO:0060372"}


id: FYECO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using carbendazim (MBC) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBC block and release","termid":"FYECO:0000365"}


id: PBO:0027529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine_and_rapamycin","termid":"PBO:0027529"}


id: GO:0052188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular component in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052188)","synonyms":[{"name":"modification of cellular component in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052188"}


id: PBO:0084955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-transmembrane subunit of the DSC ubiquitin ligase complex; similar in sequence to rhomboid pseudoproteases Der1p and UBAC2 that function in ERAD; ortholog of fission yeast dsc2","termid":"PBO:0084955"}


id: PBO:0047259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member B","termid":"PBO:0047259"}


id: PBO:0083545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps two other dubious ORFs: YPR170C and YPR170W-B","termid":"PBO:0083545"}


id: GO:0030204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate metabolic process (obsolete GO:0030204)","secondary_identifiers":["Reactome:R-HSA-1793185"],"synonyms":[{"name":"chondroitin sulfate metabolism","type":"exact"},{"name":"chondroitin sulphate metabolic process","type":"exact"},{"name":"chondroitin sulphate metabolism","type":"exact"}],"termid":"GO:0030204"}


id: GO:0097126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin B2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin B2-CDK1 complex","termid":"GO:0097126"}


id: PBO:0084868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S18 ribosomal protein","termid":"PBO:0084868"}


id: GO:0001401
data:
  {"annotated_genes":["SJAG_02355","SJAG_01780","SJAG_03416","SJAG_01951"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62062,70317,73744,90708],"is_not":false,"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"A large complex of the mitochondrial outer membrane that mediates sorting of some imported proteins to the outer membrane and their assembly in the membrane; functions after import of incoming proteins by the mitochondrial outer membrane translocase complex.","definition_xrefs":["PMID:12891361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01780":null,"SJAG_01951":null,"SJAG_02355":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"SAM complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TOB complex","type":"exact"},{"name":"mitochondrial sorting and assembly machinery complex","type":"exact"}],"termid":"GO:0001401","terms_by_termid":{"GO:0001401":null}}


id: PBO:0063726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 1","termid":"PBO:0063726"}


id: PBO:0035928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035928"}


id: PBO:0062697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 1 pseudogene","termid":"PBO:0062697"}


id: MONDO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined immunodeficiency characterized by recurrent infections, autoimmunity, congenital myopathy and ectodermal dysplasia. It comprises two sub-types that are due to mutations in the ORAI1 and STIM1 genes: CID due to ORAI1 deficiency and CID due to STIM1 deficiency.","definition_xrefs":["Orphanet:169090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to CRAC channel dysfunction","secondary_identifiers":["MEDGEN:929240","icd11.foundation:1641826886","SCTID:717811007","GARD:17048","UMLS:C4303571"],"synonyms":[{"name":"immune dysfunction due to T-cell inactivation due to calcium entry defect","type":"exact"}],"termid":"MONDO:0015695","xrefs":{"Monarch":{"xref_id":"0015695"}}}


id: SO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence feature that corresponds to a single amino acid residue in a polypeptide.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"polypeptide","termid":"SO:0000104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Amino_acid"],"synonyms":[{"name":"amino acid","type":"exact"}],"termid":"SO:0001237"}


id: SO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA_thermometer is a cis element in the 5' end of an mRNA that can change its secondary structure in response to temperature and coordinate temperature-dependent gene expression.","definition_xrefs":["PMID:22421878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_thermometer","secondary_identifiers":["https://en.wikipedia.org/wiki/RNA_thermometer"],"synonyms":[{"name":"RNA thermometer","type":"exact"},{"name":"RNA thermoregulator","type":"exact"},{"name":"RNAT","type":"exact"},{"name":"thermoregulator","type":"exact"}],"termid":"SO:0002168"}


id: MONDO:0015105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete African tick typhus (obsolete MONDO:0015105)","termid":"MONDO:0015105","xrefs":{"Monarch":{"xref_id":"0015105"}}}


id: PBO:0047503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 4 (pseudogene)","termid":"PBO:0047503"}


id: GO:0102786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + a stearoyl-[acp] + a reduced ferredoxin = 2 H2O + an oleoyl-[acp] + an oxidized ferredoxin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete stearoyl-[acp] desaturase activity (obsolete GO:0102786)","termid":"GO:0102786"}


id: PBO:0047446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIb","termid":"PBO:0047446"}


id: MONDO:0044645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplastic disease characterized by infantile to childhood onset of evidence of bone marrow insufficiency/failure associated with increased risk for myelodysplastic syndrome or acute myeloid leukemia. Most patients present with petechiae, easy bruising, or anemia. Rapid progression is common, and prognosis is generally poor.","definition_xrefs":["Orphanet:495930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial monosomy 7 syndrome","secondary_identifiers":["OMIMPS:252270","MEDGEN:1826116","UMLS:C5681220","GARD:20827"],"synonyms":[{"name":"monosomy 7 myelodysplasia and leukaemia syndrome","type":"exact"},{"name":"monosomy 7 myelodysplasia and leukemia syndrome","type":"exact"}],"termid":"MONDO:0044645","xrefs":{"Monarch":{"xref_id":"0044645"}}}


id: PBO:0066337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2","termid":"PBO:0066337"}


id: GO:1904312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold(3+) stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16206274","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"response to gold(3+)","termid":"GO:1904311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gold(3+)","termid":"GO:1904312"}


id: PBO:0090234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex scaffold subunit 1","termid":"PBO:0090234"}


id: GO:0034786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-fluorenone + O2 + 2 H+ + 2 e- = 1-hydro-1,1a-dihydroxy-9-fluorenone.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-fluorenone-3,4-dioxygenase activity (obsolete GO:0034786)","termid":"GO:0034786"}


id: PBO:0062817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSBPL10 antisense RNA 1","termid":"PBO:0062817"}


id: GO:0034109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a second cell of the identical type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"homotypic cell-cell adhesion","termid":"GO:0034109"}


id: MONDO:0008383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, systemic autoimmune disorder characterized by inflammation in the synovial membranes and articular surfaces. It manifests primarily as a symmetric, erosive polyarthritis that spares the axial skeleton and is typically associated with the presence in the serum of rheumatoid factor.","definition_xrefs":["NCIT:C2884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of musculoskeletal system","termid":"MONDO:0000589"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid arthritis","secondary_identifiers":["ICD9:714.0","MESH:D001172","MEDGEN:2078","Orphanet:284130","OMIM:180300","SCTID:69896004","HP:0001370","DOID:7148","EFO:0000685","UMLS:C0003873","icd11.foundation:576319925"],"synonyms":[{"name":"RA","type":"exact"},{"name":"arthritis or polyarthritis, rheumatic","type":"exact"},{"name":"arthritis, rheumatoid","type":"exact"},{"name":"atrophic arthritis","type":"broad"},{"name":"autoimmune arthritis","type":"exact"},{"name":"rheumatoid arthritis","type":"exact"},{"name":"rheumatoid arthritis, progression of","type":"exact"},{"name":"rheumatoid arthritis, susceptibility to","type":"related"}],"termid":"MONDO:0008383","xrefs":{"Monarch":{"xref_id":"0008383"}}}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_00136","SJAG_02782","SJAG_04955","SJAG_01817","SJAG_01913","SJAG_00212","SJAG_04015","SJAG_02023","SJAG_05294","SJAG_01397","SJAG_01447","SJAG_01471","SJAG_03406","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58413,60649,60758,61290,61613,62011,62786,65005,65641,68081,71569,78803,78865,79962],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: MONDO:1040005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder in which the cause of the disease is a mutation in the PRPF19 gene. This disorder is characterised by developmental, motor and speech delay, and facial dysmorphisms. Most patients present mild to moderate intellectual disability, autism spectrum disorder or autistic features, and hypotonia. Other phenotypes observed less frequently include seizures, and visual and cardiac abnormalities.","definition_xrefs":["PMID:37962958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"PRPF19-related neurodevelopmental disorder","termid":"MONDO:1040005","xrefs":{"Monarch":{"xref_id":"1040005"}}}


id: SO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dispersed repeat family with many copies, each from 1 to 6 kb long. New elements are generated by retroposition of a transcribed copy. Typically the LINE contains 2 ORF's one of which is reverse transcriptase, and 3'and 5' direct repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE_element","synonyms":[{"name":"LINE","type":"exact"},{"name":"LINE element","type":"exact"},{"name":"Long interspersed element","type":"exact"},{"name":"Long interspersed nuclear element","type":"exact"}],"termid":"SO:0000194"}


id: GO:0097525
data:
  {"annotated_genes":["SJAG_04230","SJAG_00058","SJAG_04529","SJAG_01440","SJAG_01634","SJAG_00531","SJAG_02279","SJAG_04222","SJAG_01308","SJAG_03210","SJAG_04433","SJAG_01301","SJAG_00643","SJAG_01654","SJAG_03547","SJAG_00577","SJAG_00498","SJAG_03460","SJAG_01327","SJAG_05235","SJAG_01452","SJAG_05208","SJAG_04497","SJAG_02843","SJAG_00147","SJAG_04079","SJAG_01547","SJAG_03983","SJAG_04318","SJAG_03214","SJAG_04911","SJAG_02185","SJAG_01819","SJAG_02295","SJAG_01015","SJAG_05009","SJAG_00322","SJAG_00504","SJAG_03070","SJAG_03410","SJAG_04214","SJAG_02304","SJAG_03369","SJAG_00414","SJAG_00278","SJAG_00313","SJAG_05240","SJAG_01008","SJAG_04163","SJAG_00474","SJAG_03469","SJAG_03245","SJAG_00989","SJAG_02469","SJAG_02455","SJAG_03995","SJAG_04538","SJAG_03954","SJAG_01870","SJAG_04405","SJAG_00539"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103026,77452,70820,94338,112674,74406,70402,76039,79681,107260,73070,74487,77055,79911,113583,73505,77162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[77736,115237,102730,116168,103521,70821,76332,77056,76040,109812,110376,96154,77453,72477,80487,116701,73071,76224,113189,75738,79682,74451,108849,74259,78091,73547,70758,112961,106663,108201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[77057,77454,79683,70822,75420,73072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[93456,77937,71806,62091,76042,80392,106158,116703,73074,110938,78033,70823,77724,100953,98338,79715,79118,115162,110377,76600,74674,95514,77688,106200,78657,108850,63410,71021,111449,78847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[77687,70819,73069,106866,116704,116170,72851,103022,78846,79680,96156,76423,106665,113191,97729,115239,77054,76038,108851,118129,77451,100954,110378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[62090,71020,79117,79215,80390,77936,72121,105813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A small ribonucleoprotein complex involved in formation of the spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nuclear ribonucleoprotein complex","termid":"GO:0030532"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"spliceosomal snRNP complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0097525","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0046540":null}}


id: PR:P40847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["UniProtKB:P40847","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: PBO:0027777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_actomyosin_contractile_ring_contraction","termid":"PBO:0027777"}


id: PBO:0066675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinaldehyde binding protein 1","termid":"PBO:0066675"}


id: FYPO:0001218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear export does not occur when the cell is subject to nitrogen starvation. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear export","termid":"FYPO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished nuclear export during cellular response to nitrogen starvation","synonyms":[{"name":"abolished nuclear export during cellular response to nitrogen depletion","type":"exact"},{"name":"abolished nuclear export during cellular response to nitrogen deprivation","type":"exact"},{"name":"abolished nuclear export during cellular response to nitrogen starvation during mitotic cell cycle","type":"related"},{"name":"absent nuclear export during response to nitrogen starvation","type":"exact"},{"name":"nuclear export during response to nitrogen starvation abolished","type":"exact"},{"name":"nuclear export during response to nitrogen starvation abolished during vegetative growth","type":"exact"},{"name":"nuclear export in response to nitrogen starvation abolished","type":"exact"}],"termid":"FYPO:0001218"}


id: MONDO:0020123
data:
  {"annotated_genes":["SJAG_00532"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009706"}]},"cv_name":"mondo","definition":"A group of rare inherited disorders characterized by a deficiency of enzymes that are involved in metabolic pathways that affect muscles. The disorders are characterized by muscle dysfunction.","definition_xrefs":["NCIT:C98985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00532":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"metabolic myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:26111005","MEDGEN:452364","GARD:19472","ICD9:359.89","MedDRA:10068836","Orphanet:98486","UMLS:C0270984"],"termid":"MONDO:0020123","terms_by_termid":{"MONDO:0009706":null},"xrefs":{"Monarch":{"xref_id":"0020123"}}}


id: FYPO:0004645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004645"}


id: GO:1905099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:TermGenie","PMID:20484009","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of GTP binding","termid":"GO:1904426"},{"relation_name":"is_a","term_name":"regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of guanyl-nucleotide exchange factor activity","synonyms":[{"name":"activation of GDP-dissociation stimulator activity","type":"narrow"},{"name":"activation of GDS","type":"narrow"},{"name":"activation of GEF","type":"narrow"},{"name":"activation of GNRP","type":"narrow"},{"name":"activation of guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide release factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide releasing factor","type":"narrow"},{"name":"positive regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"positive regulation of GDS","type":"exact"},{"name":"positive regulation of GEF","type":"exact"},{"name":"positive regulation of GNRP","type":"narrow"},{"name":"positive regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"positive regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up regulation of GDS","type":"exact"},{"name":"up regulation of GEF","type":"exact"},{"name":"up regulation of GNRP","type":"narrow"},{"name":"up regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up-regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up-regulation of GDS","type":"exact"},{"name":"up-regulation of GEF","type":"exact"},{"name":"up-regulation of GNRP","type":"narrow"},{"name":"up-regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"upregulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"upregulation of GDS","type":"exact"},{"name":"upregulation of GEF","type":"exact"},{"name":"upregulation of GNRP","type":"narrow"},{"name":"upregulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:1905099"}


id: GO:0045760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"positively_regulates","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of action potential","synonyms":[{"name":"activation of action potential","type":"narrow"},{"name":"stimulation of action potential","type":"narrow"},{"name":"up regulation of action potential","type":"exact"},{"name":"up-regulation of action potential","type":"exact"},{"name":"upregulation of action potential","type":"exact"}],"termid":"GO:0045760"}


id: PBO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone reductase complex subunit (predicted)","termid":"PBO:0005601"}


id: MONDO:0030339
data:
  {"annotated_genes":["SJAG_03617"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86708],"is_not":false,"summary":null,"term":"MONDO:0030339"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03617":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 28, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619453","UMLS:C5562069","MEDGEN:1794279"],"synonyms":[{"name":"MCPH28","type":"exact"},{"name":"microcephaly 28, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0030339","terms_by_termid":{"MONDO:0030339":null},"xrefs":{"Monarch":{"xref_id":"0030339"}}}


id: GO:0003884
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80742],"is_not":false,"summary":null,"term":"GO:0003884"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-alpha-amino acid + H2O + O2 = a 2-oxocarboxylate + H2O2 + NH4+.","definition_xrefs":["RHEA:21816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary methylamine oxidase activity","termid":"GO:0008131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-amino-acid oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:D-AMINO-ACID-OXIDASE-RXN","Reactome:R-HSA-389821","EC:1.4.3.3"],"synonyms":[{"name":"D-amino-acid:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-amino acid:O2 oxidoreductase activity","type":"related"},{"name":"new yellow enzyme","type":"related"}],"termid":"GO:0003884","terms_by_termid":{"GO:0003884":null}}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: PBO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase","termid":"PBO:0090603"}


id: MONDO:0016185
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87019,87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"qualitative or quantitative defects of protein O-mannosyltransferase 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20424","UMLS:C5680852","MEDGEN:1842845","Orphanet:209033"],"synonyms":[{"name":"qualitative or quantitative defects of protein O-mannosyltransferase type 2","type":"exact"}],"termid":"MONDO:0016185","terms_by_termid":{"MONDO:0013162":null},"xrefs":{"Monarch":{"xref_id":"0016185"}}}


id: PBO:0088061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase (E3); interacts with Rpt4p and Rpt6p, two subunits of the 19S particle of the 26S proteasome; involved in K29-linked ubiquitin-dependent protein catabolism, including ubiquitin fusion proteins; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0088061"}


id: PBO:0053112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 2","termid":"PBO:0053112"}


id: PBO:0063222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 2","termid":"PBO:0063222"}


id: PBO:0067139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 187, pseudogene","termid":"PBO:0067139"}


id: GO:1903166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polycyclic arene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:10998501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polycyclic arene","termid":"GO:1903166"}


id: PBO:0040673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31 pseudogene 1","termid":"PBO:0040673"}


id: PBO:0072080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 10","termid":"PBO:0072080"}


id: GO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 2-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["EC:3.1.3.19","RHEA:13105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerol-2-phosphatase activity","secondary_identifiers":["MetaCyc:GLYCEROL-2-PHOSPHATASE-RXN","KEGG_REACTION:R01043"],"synonyms":[{"name":"2-glycerophosphatase activity","type":"related"},{"name":"beta-glycerophosphatase activity","type":"related"},{"name":"beta-glycerophosphate phosphatase activity","type":"related"},{"name":"glycerol-2-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047954"}


id: GO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to a specific DNA sequence and recruiting another transcription factor to the DNA in order to modulate transcription. The recruited factor may bind DNA directly, or may be colocalized via protein-protein interactions.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"RNA polymerase II sequence-specific DNA-binding transcription factor recruiting activity","synonyms":[{"name":"sequence-specific DNA binding transcription factor recruiting transcription factor activity","type":"exact"},{"name":"transcription factor activity, sequence-specific DNA binding transcription factor recruiting","type":"exact"},{"name":"transcription factor activity, sequence-specific DNA-binding transcription factor recruiting","type":"related"}],"termid":"GO:0001010"}


id: FYPO:0001324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during vegetative growth","synonyms":[{"name":"decreased protein accumulation during vegetative growth","type":"related"},{"name":"decreased protein level during mitotic cell cycle","type":"related"},{"name":"reduced protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0001324"}


id: FYPO:0001208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"substance absent from cell during vegetative growth","synonyms":[{"name":"substance absent from cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001208"}


id: PBO:0061310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 3","termid":"PBO:0061310"}


id: MONDO:1012228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, sheep","secondary_identifiers":["OMIA:000830-9940"],"termid":"MONDO:1012228","xrefs":{"Monarch":{"xref_id":"1012228"}}}


id: GO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG).","definition_xrefs":["PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"platelet alpha granule","secondary_identifiers":["Wikipedia:Platelet_alpha-granule"],"synonyms":[{"name":"platelet alpha-granule","type":"exact"}],"termid":"GO:0031091"}


id: PBO:0028286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0028286"}


id: SO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structural region in an RNA molecule which promotes ribosomal frameshifting of cis coding sequence.","definition_xrefs":["RFAM:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_regulatory_frameshift_element","synonyms":[{"name":"cis regulatory frameshift element","type":"exact"}],"termid":"SO:0001427"}


id: GO:0043975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 36 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 acetylation (obsolete GO:0043975)","synonyms":[{"name":"histone H3 acetylation at K36","type":"exact"},{"name":"histone H3K36 acetylation","type":"exact"}],"termid":"GO:0043975"}


id: MONDO:0018370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KLHL9-related early-onset distal myopathy is a rare, genetic distal myopathy characterized by slowly progressive distal limb muscle weakness and atrophy (beginning with anterior tibial muscle involvement followed by the intrinsic hand muscles) in association with reduced sensation in a stocking-glove distribution. Patients present with high stepping gait, ankle areflexia and contractures in the first to second decade of life, associated with marked ankle extensor muscle atrophy; later proximal muscle involvement is moderate and ambulation is preserved throughout the life.","definition_xrefs":["Orphanet:399081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"KLHL9-related early-onset distal myopathy","secondary_identifiers":["SCTID:763776004","GARD:21655","MEDGEN:1647584","UMLS:C4706574"],"termid":"MONDO:0018370","xrefs":{"Monarch":{"xref_id":"0018370"}}}


id: GO:0098950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic early endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic early endosome membrane (obsolete GO:0098950)","synonyms":[{"name":"intrinsic to postsynaptic early endosome membrane","type":"narrow"}],"termid":"GO:0098950"}


id: FYPO:0006062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which one septin ring assembles in the normal location, but one or more additional septin rings also form in abnormal locations.","definition_xrefs":["PMID:15385632","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring assembly during vegetative growth","termid":"FYPO:0006061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"ectopic septin ring assembly during vegetative growth","synonyms":[{"name":"ectopic septin ring assembly during mitotic cell cycle","type":"related"},{"name":"ectopic septin ring formation during vegetative growth","type":"exact"}],"termid":"FYPO:0006062"}


id: GO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a cell to a specific fate and contributes to a cell adopting a venous endothelial cell fate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in venous endothelial cell fate commitment (obsolete GO:0060852)","termid":"GO:0060852"}


id: PR:Q9UTC5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YggC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase C227.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.14","secondary_identifiers":["UniProtKB:Q9UTC5"],"synonyms":[{"name":"Spom972h-yggC","type":"exact"}],"termid":"PR:Q9UTC5"}


id: MONDO:0009742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Elejalde syndrome (ES) is characterized by silvery to leaden hair, bronze skin color in sun-exposed areas and severe neurological impairment.","definition_xrefs":["Orphanet:33445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroectodermal melanolysosomal disease","secondary_identifiers":["MEDGEN:348553","icd11.foundation:771734461","MESH:C536203","OMIM:256710","GARD:16630","SCTID:724091002","UMLS:C1860157"],"synonyms":[{"name":"ELEJALDE disease","type":"related"},{"name":"Elejalde disease","type":"exact"},{"name":"neuroectodermal melanolysosomal disease","type":"exact"}],"termid":"MONDO:0009742","xrefs":{"Monarch":{"xref_id":"0009742"}}}


id: PBO:0117247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl-tRNA hydrolase, stalled-ribosome rescue factor srRF2, Pth3","termid":"PBO:0117247"}


id: GO:0031897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The translocon of the inner envelope of chloroplasts, which facilitates the import of proteins across the chloroplast inner membrane.","definition_xrefs":["PMID:12180471","PMID:12393016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast inner membrane","termid":"GO:0009706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Tic complex","synonyms":[{"name":"chloroplast inner membrane translocase complex","type":"exact"}],"termid":"GO:0031897"}


id: MONDO:0016549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary megaureter, adult-onset form","secondary_identifiers":["MEDGEN:1842492","UMLS:C5680937","Orphanet:238642","GARD:20639"],"termid":"MONDO:0016549","xrefs":{"Monarch":{"xref_id":"0016549"}}}


id: MONDO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of rheumatic pericarditis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic pericarditis","termid":"MONDO:0024655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic rheumatic pericarditis","secondary_identifiers":["DOID:1869","ICD10CM:I09.2","icd11.foundation:1473004877","MEDGEN:510021","SCTID:78069008","UMLS:C0155561","ICD9:393"],"synonyms":[{"name":"rheumatic pericarditis, chronic","type":"exact"}],"termid":"MONDO:0002133","xrefs":{"Monarch":{"xref_id":"0002133"}}}


id: PBO:0012234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone related protein family","termid":"PBO:0012234"}


id: GO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the formation of carboxybiotin-carboxyl-carrier protein from biotin-carboxyl-carrier protein and carbon dioxide (CO2).","definition_xrefs":["EC:6.3.4.14"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin carboxylase complex (obsolete GO:0009343)","termid":"GO:0009343"}


id: MONDO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglion or cyst of synovium/tendon/bursa","secondary_identifiers":["DOID:9754","UMLS:C0349693","ICD9:727.49","MEDGEN:578881"],"termid":"MONDO:0004874","xrefs":{"Monarch":{"xref_id":"0004874"}}}


id: GO:0017139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arsenate sensitivity/resistance (obsolete GO:0017139)","synonyms":[{"name":"arsenate sensitivity/resistance","type":"exact"}],"termid":"GO:0017139"}


id: PBO:0076838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 5","termid":"PBO:0076838"}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: PBO:0060617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 2","termid":"PBO:0060617"}


id: PBO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic mitochondrial protein (predicted)","termid":"PBO:0002043"}


id: MONDO:0002135
data:
  {"annotated_genes":["SJAG_01179","SJAG_MIT15","SJAG_03972","SJAG_01816","SJAG_04376","SJAG_02656","SJAG_02007","SJAG_02641","SJAG_03588","SJAG_MIT03","SJAG_01630","SJAG_MIT13","SJAG_02384","SJAG_03957","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008134"},{"annotations":[85903,85902,85904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020737"},{"annotations":[87188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015011"},{"annotations":[85743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033549"},{"annotations":[86133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008135"},{"annotations":[86615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957935"},{"annotations":[86410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957978"},{"annotations":[85821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008133"},{"annotations":[86030,86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012543"},{"annotations":[85795,85794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014571"},{"annotations":[86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007429"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder affecting the optic nerve (second cranial nerve).","definition_xrefs":["NCIT:C79698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01179":null,"SJAG_01630":null,"SJAG_01816":null,"SJAG_02007":null,"SJAG_02384":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02848":null,"SJAG_03588":null,"SJAG_03957":null,"SJAG_03972":null,"SJAG_04376":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"is_obsolete":false,"name":"optic nerve disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3887709","ICD9:377.49","DOID:1891","ICD9:377.9","SCTID:77157004","MESH:D009901","MEDGEN:854546"],"synonyms":[{"name":"cranial nerve II disease","type":"exact"},{"name":"cranial nerve II disease or disorder","type":"exact"},{"name":"disease of cranial nerve II","type":"exact"},{"name":"disease or disorder of cranial nerve II","type":"exact"},{"name":"disorder of cranial nerve II","type":"exact"},{"name":"disorder of the second nerve","type":"exact"},{"name":"optic nerve disorder","type":"exact"},{"name":"optic neuropathy","type":"exact"},{"name":"second cranial nerve disorder","type":"exact"}],"termid":"MONDO:0002135","terms_by_termid":{"MONDO:0007429":null,"MONDO:0008133":null,"MONDO:0008134":null,"MONDO:0008135":null,"MONDO:0010788":null,"MONDO:0012543":null,"MONDO:0014571":null,"MONDO:0015011":null,"MONDO:0020737":null,"MONDO:0033549":null,"MONDO:0957935":null,"MONDO:0957978":null},"xrefs":{"Monarch":{"xref_id":"0002135"}}}


id: FYPO:0005530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is abolished.","definition_xrefs":["PMID:25972440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"abolished protein localisation to chromatin at boundary element IRC1L during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"abolished protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at boundary element IRC1L during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005530"}


id: MONDO:1012142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple lipomatosis, non-human animal","termid":"MONDO:1011809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple lipomatosis, pig","secondary_identifiers":["OMIA:000606-9823"],"termid":"MONDO:1012142","xrefs":{"Monarch":{"xref_id":"1012142"}}}


id: PBO:0052424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 3","termid":"PBO:0052424"}


id: GO:1904020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24732013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor internalization","synonyms":[{"name":"regulation of G-protein-coupled receptor internalization","type":"exact"}],"termid":"GO:1904020"}


id: MONDO:0027451
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87166],"is_not":false,"summary":null,"term":"MONDO:0027451"}]},"cv_name":"mondo","definition":"An autosomal recessive cutis laxa type II classic type characterized by cardiovascular and neurologic involvement and that has material basis in homozygous mutation in the ATP6V1A gene on chromosome 3q13.","definition_xrefs":["DOID:0070129"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive cutis laxa type 2, classic type","termid":"MONDO:0009054"},{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2","termid":"MONDO:0019573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2D","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1376619","OMIM:617403","UMLS:C4479409"],"synonyms":[{"name":"ARCL2D","type":"exact"},{"name":"autosomal recessive cutis laxa type IID","type":"related"},{"name":"cutis laxa, autosomal recessive, type 2D","type":"related"},{"name":"cutis laxa, autosomal recessive, type IID","type":"related"}],"termid":"MONDO:0027451","terms_by_termid":{"MONDO:0027451":null},"xrefs":{"Monarch":{"xref_id":"0027451"}}}


id: GO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast organization","termid":"GO:0009659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elaioplast organization","synonyms":[{"name":"elaioplast organisation","type":"exact"},{"name":"elaioplast organization and biogenesis","type":"related"}],"termid":"GO:0043579"}


id: PBO:0036295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit Seh1","termid":"PBO:0036295"}


id: PBO:0040642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper ATF-like transcription factor 3","termid":"PBO:0040642"}


id: MOD:00384
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and a glycine residue to form 2-imino-methionine 5-imidazolinone glycine.","definition_xrefs":["PubMed:10852900","PubMed:12909624","PubMed:15542608","PubMed:12185250","RESID:AA0379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-imino-methionine 5-imidazolinone glycine","synonyms":[{"name":"(2-[1-imino-3-(methylsulfanyl)propyl]-5-oxo-4,5-dihydro-imidazol-1-yl)acetic acid","type":"exact"},{"name":"(2-[3-(methylsulfanyl)propanimidoyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2,N-didehydromethionyl-5-imidazolinone glycine","type":"exact"},{"name":"2-[1-imino-3-(methylsulfanyl)propyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-imino-methionine 5-imidazolinone glycine","type":"exact"},{"name":"2-imino-methionyl-5-imidazolinone glycine","type":"exact"},{"name":"CROSSLNK 2-iminomethyl-5-imidazolinone (Met-Gly)","type":"exact"},{"name":"GFP-like chromoprotein asFP595 chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"red fluorescent protein eqFP611 chromophore","type":"exact"}],"termid":"MOD:00384"}


id: FYPO:0005502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abnormal transcription","synonyms":[{"name":"abnormal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0005502"}


id: GO:1900676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of F-9775B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of F-9775B biosynthetic process","termid":"GO:1900675"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"negatively_regulates","term_name":"F-9775B biosynthetic process","termid":"GO:1900614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of F-9775B biosynthetic process","synonyms":[{"name":"down regulation of F-9775B anabolism","type":"exact"},{"name":"down regulation of F-9775B biosynthesis","type":"exact"},{"name":"down regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down regulation of F-9775B formation","type":"exact"},{"name":"down regulation of F-9775B synthesis","type":"exact"},{"name":"down-regulation of F-9775B anabolism","type":"exact"},{"name":"down-regulation of F-9775B biosynthesis","type":"exact"},{"name":"down-regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down-regulation of F-9775B formation","type":"exact"},{"name":"down-regulation of F-9775B synthesis","type":"exact"},{"name":"downregulation of F-9775B anabolism","type":"exact"},{"name":"downregulation of F-9775B biosynthesis","type":"exact"},{"name":"downregulation of F-9775B biosynthetic process","type":"exact"},{"name":"downregulation of F-9775B formation","type":"exact"},{"name":"downregulation of F-9775B synthesis","type":"exact"},{"name":"inhibition of F-9775B anabolism","type":"exact"},{"name":"inhibition of F-9775B biosynthesis","type":"exact"},{"name":"inhibition of F-9775B biosynthetic process","type":"narrow"},{"name":"inhibition of F-9775B formation","type":"exact"},{"name":"inhibition of F-9775B synthesis","type":"exact"},{"name":"negative regulation of F-9775B anabolism","type":"exact"},{"name":"negative regulation of F-9775B biosynthesis","type":"exact"},{"name":"negative regulation of F-9775B formation","type":"exact"},{"name":"negative regulation of F-9775B synthesis","type":"exact"}],"termid":"GO:1900676"}


id: PBO:0064725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 61","termid":"PBO:0064725"}


id: GO:0035944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a perforin protein due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"perforin production","termid":"GO:0035944"}


id: PBO:0045781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodysplasin A2 receptor","termid":"PBO:0045781"}


id: GO:0062060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a NuA4 histone acetyltransferase complex.","definition_xrefs":["PMID:15528408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex binding","termid":"GO:0062060"}


id: GO:0015014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"part_of","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0005975"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process, chain elongation","synonyms":[{"name":"heparan sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"exact"},{"name":"heparan sulfate proteoglycan chain elongation","type":"exact"},{"name":"heparan sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"heparan sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"},{"name":"heparin proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"related"}],"termid":"GO:0015014"}


id: GO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["PMID:12878180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin J receptor activity","synonyms":[{"name":"PGJ receptor activity","type":"related"},{"name":"PGJ(2) receptor activity","type":"exact"}],"termid":"GO:0001785"}


id: SO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The reverse complement of the primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_primary_transcript","synonyms":[{"name":"antisense primary transcript","type":"exact"}],"termid":"SO:0000645"}


id: MONDO:0017802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, sex cord-stromal neoplasm, with a typically unilateral location in the ovary, characterized by mixed features of both fibroma and thecoma. Patients may be asymptomatic or may present with pelvic/abdominal pain and/or distension and, occasionally, with post-menopausal bleeding. Large tumors (>10cm) are often associated with pleural effusion and ascites (the Meigs syndrome triad).","definition_xrefs":["Orphanet:314478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign ovarian sex cord-stromal tumor","termid":"MONDO:0024387"},{"relation_name":"is_a","term_name":"fibrothecoma","termid":"MONDO:0700036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian fibrothecoma","secondary_identifiers":["GARD:21376","MEDGEN:1635957","SCTID:765190005","UMLS:C4707356"],"termid":"MONDO:0017802","xrefs":{"Monarch":{"xref_id":"0017802"}}}


id: GO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["GOC:ai","PMID:15176085","PMID:18421706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ocellus pigment catabolic process","synonyms":[{"name":"ocellus pigment breakdown","type":"exact"},{"name":"ocellus pigment catabolism","type":"exact"},{"name":"ocellus pigment degradation","type":"exact"}],"termid":"GO:0046159"}


id: PBO:0074994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-5","termid":"PBO:0074994"}


id: MONDO:0018876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mantle cell lymphoma is a rare form of malignant non-Hodgkin lymphoma affecting B lymphocytes in the lymph nodes in a region called the ``mantle zone''.","definition_xrefs":["Orphanet:52416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"mantle cell lymphoma","secondary_identifiers":["MedDRA:10061275","NCIT:C4337","MEDGEN:1668377","ONCOTREE:MCL","GARD:6969","SCTID:443487006","MESH:D020522","NORD:1399","ICDO:9673/3","UMLS:C4721414","EFO:1001469","ICD9:200.40","icd11.foundation:1804127841","DOID:0050746"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"MCL","type":"exact"},{"name":"classical mantle cell lymphoma","type":"exact"},{"name":"lymphoma, mantle cell","type":"related"},{"name":"mantle cell lymphoma","type":"exact"},{"name":"mantle zone lymphoma","type":"exact"}],"termid":"MONDO:0018876","xrefs":{"Monarch":{"xref_id":"0018876"}}}


id: PBO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_conjugation","termid":"PBO:0031398"}


id: GO:1905365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["PMID:26911690","GO_REF:0000058","GOC:bc","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endosome organization","termid":"GO:1904978"},{"relation_name":"regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of intralumenal vesicle formation","synonyms":[{"name":"regulation of endosome membrane budding","type":"exact"}],"termid":"GO:1905365"}


id: MONDO:0014464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive encephalopathy with leukodystrophy due to DECR deficiency is a rare mitochondrial disease, which presents with neonatal hypotonia, central nervous system abnormalities (ventriculomegaly, corpus callosum hypoplasia, cerebellar atrophy), acquired microcephaly, failure to thrive, developmental delay and intermittent lactic acidosis provoked by catabolic stress (e.g. infection). Hyperlysinemia and elevated C10:2 carnitine can be detected in plasma. Later on, epilepsy, cerebellar ataxia, renal tubular acidosis, severe encephalopathy, dystonia, spastic quadriplegia and other complications may develop.","definition_xrefs":["Orphanet:431361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"progressive encephalopathy with leukodystrophy due to DECR deficiency","secondary_identifiers":["MEDGEN:346552","GARD:10327","UMLS:C1857252","MESH:C565624","OMIM:616034"],"synonyms":[{"name":"2,4-alpha dienoyl-CoA reductase deficiency","type":"related"},{"name":"2,4-dienoyl-CoA reductase deficiency","type":"exact"},{"name":"DECR deficiency with hyperlysinemia","type":"exact"},{"name":"DECRD","type":"related"},{"name":"dienoyl-CoA reductase deficiency","type":"related"},{"name":"progressive encephalopathy with leukodystrophy due to DECR deficiency","type":"exact"}],"termid":"MONDO:0014464","xrefs":{"Monarch":{"xref_id":"0014464"}}}


id: MONDO:0016903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 4q deletion is a chromosome abnormality that affects many different parts of the body. People with this condition are missing genetic material located on the long arm (q) of chromosome 4 in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of the deletion and which genes are involved. Common features shared by many people with this deletion includedistinctive craniofacial features, skeletal abnormalities, heart defects, intellectual disability, developmental delay, and short stature. Most cases are not inherited, although affectedpeople can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 4","termid":"MONDO:0016869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 4","secondary_identifiers":["Orphanet:262029","MEDGEN:468967","icd11.foundation:855319857","MESH:C537639","UMLS:C0265404","GARD:1340"],"synonyms":[{"name":"4q deletion","type":"related"},{"name":"4q monosomy","type":"related"},{"name":"chromosome 4q deletion","type":"related"},{"name":"deletion 4q","type":"related"},{"name":"monosomy 4q","type":"related"},{"name":"partial deletion of chromosome 4q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 4","type":"exact"},{"name":"partial monosomy 4q","type":"related"},{"name":"partial monosomy of chromosome 4q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 4","type":"exact"}],"termid":"MONDO:0016903","xrefs":{"Monarch":{"xref_id":"0016903"}}}


id: PBO:0029524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spheroid_vegetative_cell","termid":"PBO:0029524"}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: GO:0046514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide catabolic process","synonyms":[{"name":"ceramide breakdown","type":"exact"},{"name":"ceramide catabolism","type":"exact"},{"name":"ceramide degradation","type":"exact"}],"termid":"GO:0046514"}


id: PBO:0040971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 42","termid":"PBO:0040971"}


id: MONDO:0015373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Saldino-Mainzer syndrome (obsolete MONDO:0015373)","termid":"MONDO:0015373","xrefs":{"Monarch":{"xref_id":"0015373"}}}


id: PBO:0090122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L complex subunit","termid":"PBO:0090122"}


id: MONDO:0800037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTTS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTTS1","synonyms":[{"name":"MTTS1 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800037","xrefs":{"Monarch":{"xref_id":"0800037"}}}


id: GO:0010981
data:
  {"annotated_genes":["SJAG_00610","SJAG_00424","SJAG_04771","SJAG_04666","SJAG_02278","SJAG_04659","SJAG_04668","SJAG_01255","SJAG_04462","SJAG_01787","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87862,92759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[91108,92743,105668,106240,118209,118337,103162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[103164,92765,89780,95274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell wall macromolecule metabolism. Cell wall macromolecule metabolic processes are the chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall macromolecule metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010981","terms_by_termid":{"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0081993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 23","termid":"PBO:0081993"}


id: GO:1900198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of penicillin metabolic process","termid":"GO:0033246"},{"relation_name":"is_a","term_name":"regulation of penicillin biosynthetic process","termid":"GO:1900196"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of penicillin biosynthetic process","synonyms":[{"name":"activation of penicillin anabolism","type":"exact"},{"name":"activation of penicillin biosynthesis","type":"exact"},{"name":"activation of penicillin biosynthetic process","type":"narrow"},{"name":"activation of penicillin formation","type":"exact"},{"name":"activation of penicillin synthesis","type":"exact"},{"name":"positive regulation of penicillin anabolism","type":"exact"},{"name":"positive regulation of penicillin biosynthesis","type":"exact"},{"name":"positive regulation of penicillin formation","type":"exact"},{"name":"positive regulation of penicillin synthesis","type":"exact"},{"name":"up regulation of penicillin anabolism","type":"exact"},{"name":"up regulation of penicillin biosynthesis","type":"exact"},{"name":"up regulation of penicillin biosynthetic process","type":"exact"},{"name":"up regulation of penicillin formation","type":"exact"},{"name":"up regulation of penicillin synthesis","type":"exact"},{"name":"up-regulation of penicillin anabolism","type":"exact"},{"name":"up-regulation of penicillin biosynthesis","type":"exact"},{"name":"up-regulation of penicillin biosynthetic process","type":"exact"},{"name":"up-regulation of penicillin formation","type":"exact"},{"name":"up-regulation of penicillin synthesis","type":"exact"},{"name":"upregulation of penicillin anabolism","type":"exact"},{"name":"upregulation of penicillin biosynthesis","type":"exact"},{"name":"upregulation of penicillin biosynthetic process","type":"exact"},{"name":"upregulation of penicillin formation","type":"exact"},{"name":"upregulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900198"}


id: PBO:0076957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta induced","termid":"PBO:0076957"}


id: PBO:0090335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' DNA helicase Pif1/Pfh1","termid":"PBO:0090335"}


id: MONDO:0016586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic mastocytosis (SM) comprises a heterogeneous group of rare acquired and chronic hematological malignancies that are related to an abnormal proliferation of mast cells in tissue, including bone marrow, with or without skin involvement.","definition_xrefs":["Orphanet:2467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mastocytosis","termid":"MONDO:0007950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"systemic mastocytosis","secondary_identifiers":["icd11.foundation:1144812971","MedDRA:10042949","ONCOTREE:SM","GARD:8616","SCTID:397016004","MEDGEN:67436","NCIT:C9235","DOID:349","UMLS:C0221013"],"synonyms":[{"name":"Aggressive systemic mastocytosis","type":"related"},{"name":"Mast cell disease","type":"broad"},{"name":"SM","type":"related"},{"name":"SMCD - systemic mast cell disease","type":"exact"},{"name":"systemic mast cell disease","type":"related"},{"name":"systemic mastocytosis","type":"exact"},{"name":"systemic mastocytosis with associated hemotologic non-mast cell lineage disease (SM-AHNMD)","type":"related"},{"name":"systemic tissue Mast cell disease","type":"exact"},{"name":"systemic tissue mast cell disease","type":"exact"}],"termid":"MONDO:0016586","xrefs":{"Monarch":{"xref_id":"0016586"}}}


id: PBO:0068418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanine-7 methyltransferase","termid":"PBO:0068418"}


id: PBO:0066365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 8","termid":"PBO:0066365"}


id: MONDO:0019625
data:
  {"annotated_genes":["SJAG_02431","SJAG_03145","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87426,87427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007568"},{"annotations":[85415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012730"}]},"cv_name":"mondo","definition":"A rare genetic vascular disease characterized by the familial occurrence of thoracic aortic aneurysm, dissection or dilatation affecting one or more aortic segments (aortic root, ascending aorta, arch or descending aorta) in the absence of any other associated disease. Depending on the size, location and progression rate of dilatation/dissection, patients may be asymptomatic or may present dyspnea, cough, jaw, neck, chest or back pain, head, neck or upper limb edema, difficulty swallowing, voice hoarseness, pale skin, faint pulse and/or numbness/tingling in limbs. Patients have increased risk of presenting life threatening aortic rupture.","definition_xrefs":["Orphanet:91387"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"familial thoracic aortic aneurysm and aortic dissection","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:447.9","UMLS:C4707243","MEDGEN:1644766","SCTID:45894003","GARD:2249","OMIMPS:607086","SCTID:764965000"],"synonyms":[{"name":"Erdheim cystic medial necrosis of aorta","type":"related"},{"name":"Erdheim disease","type":"exact"},{"name":"FTAAD","type":"exact"},{"name":"annuloaortic ectasia","type":"related"},{"name":"cystic medial necrosis of aorta","type":"related"},{"name":"familial TAAD","type":"exact"},{"name":"familial aortic aneurysm","type":"related"},{"name":"familial aortic dissection","type":"exact"},{"name":"familial thoracic aortic aneurysm","type":"related"},{"name":"familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"familial thoracic aortic aneurysm and dissection","type":"related"}],"termid":"MONDO:0019625","terms_by_termid":{"MONDO:0007568":null,"MONDO:0012730":null},"xrefs":{"Monarch":{"xref_id":"0019625"}}}


id: PBO:0060259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid derived growth factor","termid":"PBO:0060259"}


id: MONDO:0014590
data:
  {"annotated_genes":["SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85606],"is_not":false,"summary":null,"term":"MONDO:0014590"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the SNAP25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00826":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:906793","DOID:0110683","GARD:16091","OMIM:616330","UMLS:C4225364"],"synonyms":[{"name":"CMS18","type":"exact"},{"name":"SNAP25 congenital myasthenic syndrome","type":"exact"},{"name":"SNAP25-DEE","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in SNAP25","type":"exact"},{"name":"congenital myasthenic syndrome type 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18, with intellectual disability and ataxia","type":"exact"},{"name":"myasthenic syndrome, congenital, type 18","type":"exact"}],"termid":"MONDO:0014590","terms_by_termid":{"MONDO:0014590":null},"xrefs":{"Monarch":{"xref_id":"0014590"}}}


id: MONDO:0004160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The involuntary loss of urine in females secondary to insufficient strength of the pelvic floor muscles; this can result from physical changes following pregnancy and childbirth, or as a response to a decrease in estrogen during menopause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female stress incontinence","secondary_identifiers":["MEDGEN:21346","UMLS:C0038437","DOID:724","ICD9:625.6","NCIT:C35042"],"synonyms":[{"name":"female urinary stress incontinence","type":"exact"},{"name":"stress incontinence - female","type":"exact"}],"termid":"MONDO:0004160","xrefs":{"Monarch":{"xref_id":"0004160"}}}


id: PBO:0027429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0027429"}


id: PBO:0017669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase Utr4 (predicted)","termid":"PBO:0017669"}


id: GO:0030485
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The contractile fiber of smooth muscle cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"smooth muscle contractile fiber","termid":"GO:0030485"}


id: MONDO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intrauterine growth retardation, renal dysgenesis and a unilobed or absent thymus.","definition_xrefs":["Orphanet:3326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic-renal-anal-lung dysplasia","secondary_identifiers":["GARD:5202","MEDGEN:336425","SCTID:723555007","UMLS:C1848812","OMIM:274265","MESH:C536907"],"synonyms":[{"name":"syndrome of unilobed or absent thymus, renal and ureter agenesis/dysgenesis, and intrauterine growth retardation (IUGR)","type":"related"},{"name":"thymic-renal-anal-lung dysplasia","type":"exact"}],"termid":"MONDO:0010129","xrefs":{"Monarch":{"xref_id":"0010129"}}}


id: PBO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs1","termid":"PBO:0036348"}


id: GO:1900078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"positively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to insulin stimulus","synonyms":[{"name":"activation of cellular response to insulin stimulus","type":"narrow"},{"name":"up regulation of cellular response to insulin stimulus","type":"exact"},{"name":"up-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"upregulation of cellular response to insulin stimulus","type":"exact"}],"termid":"GO:1900078"}


id: MONDO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urachal cancer is a type of bladder cancer, making up less than 1% of all bladder cancers. The urachus is a structure normally only present during development in the womb that connects the bellybutton and the bladder. This connection normally disappears before birth, but in some people remains. Urachalcancers are usually diagnosed in adults in their 50's and 60's and may develop at the dome or anterior wall of the bladder, along the midline of the body (including the belly button), and between the pubis symphasis and the bladder.Most urachal cancersare adenocarcinomas (cancers that develop from gland cells).Others may besarcomas (which develop from connective tissue -such as leiomyosarcoma, rhabdomyosarcoma, and malignant fibrous histiocytoma), small cell carcinomas, transitional cell cancer, and mixed neoplasias. Most individuals with urachal cancer have symptoms of with hematuria (blood in urine). Other symptoms may include abdominal pain, a palpable abdominal mass, mucinuria, and bacteriuria. Treatment usually involved surgery to remove the cancer.","definition_xrefs":["GARD:0007836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder urachal carcinoma","secondary_identifiers":["MESH:C536475","MEDGEN:419015","NCIT:C39842","DOID:5958","ONCOTREE:URCA","UMLS:C2931202"],"synonyms":[{"name":"bladder urachal cancer","type":"exact"},{"name":"bladder urachal carcinoma","type":"exact"},{"name":"urachal carcinoma","type":"related"}],"termid":"MONDO:0003715","xrefs":{"Monarch":{"xref_id":"0003715"}}}


id: PBO:0064827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 8","termid":"PBO:0064827"}


id: MONDO:1011014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alexander disease, non-human animal","termid":"MONDO:1010242"},{"relation_name":"is_a","term_name":"leukodystrophy, dog","termid":"MONDO:1011005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alexander disease, dog","secondary_identifiers":["OMIA:001208-9615"],"termid":"MONDO:1011014","xrefs":{"Monarch":{"xref_id":"1011014"}}}


id: PBO:0017556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific APC activator Slp1","termid":"PBO:0017556"}


id: MONDO:0014646
data:
  {"annotated_genes":["SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85475],"is_not":false,"summary":null,"term":"MONDO:0014646"}]},"cv_name":"mondo","definition":"Any Zimmermann-Laband syndrome in which the cause of the disease is a mutation in the ATP6V1B2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zimmermann-Laband syndrome","termid":"MONDO:0000200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00136":null},"genotype_count":0,"is_obsolete":false,"name":"Zimmermann-Laband syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616455","UMLS:C4225321","GARD:16115","MEDGEN:897567"],"synonyms":[{"name":"ATP6V1B2 Zimmermann-Laband syndrome","type":"exact"},{"name":"ZLS2","type":"related"},{"name":"Zimmermann-Laband syndrome 2","type":"exact"},{"name":"Zimmermann-Laband syndrome caused by mutation in ATP6V1B2","type":"exact"},{"name":"Zimmermann-Laband syndrome type 2","type":"exact"}],"termid":"MONDO:0014646","terms_by_termid":{"MONDO:0014646":null},"xrefs":{"Monarch":{"xref_id":"0014646"}}}


id: PBO:0084980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; reduces many aldehyde compounds including glycolaldehyde, formaldehyde and furfural; transcription unregulated by furfural, 5-hydroxymethylfurfural (HMF) and the mycotoxin patulin; expression increased by multidrug resistance transcription factors Yrm1p and Yrr1p; member of atypical subgroup 7 of the short-chain dehydrogenase/reductase (SDR) family; localizes to the cytoplasm; SWAT-GFP and mCherry fusion proteins localize to the ER and vacuole respectively","termid":"PBO:0084980"}


id: MONDO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign perivascular tumor","secondary_identifiers":["NCIT:C6529","MEDGEN:231437","DOID:5238","UMLS:C1332532"],"synonyms":[{"name":"benign Pericytic neoplasm","type":"exact"},{"name":"benign Pericytic tumor","type":"exact"},{"name":"benign Pericytic tumour","type":"exact"},{"name":"benign pericytic neoplasm","type":"exact"},{"name":"benign perivascular neoplasm","type":"exact"},{"name":"benign perivascular tumor","type":"exact"},{"name":"pericytic neoplasm, benign","type":"exact"}],"termid":"MONDO:0003342","xrefs":{"Monarch":{"xref_id":"0003342"}}}


id: MONDO:0012571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the NME8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 6","secondary_identifiers":["MEDGEN:370930","UMLS:C1970506","MESH:C567057","GARD:15502","DOID:0110606","OMIM:610852"],"synonyms":[{"name":"CILD6","type":"exact"},{"name":"NME8 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 6","type":"related"},{"name":"ciliary dyskinesia, primary, type 6","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in NME8","type":"exact"},{"name":"primary ciliary dyskinesia type 6","type":"exact"}],"termid":"MONDO:0012571","xrefs":{"Monarch":{"xref_id":"0012571"}}}


id: PBO:0073466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 2","termid":"PBO:0073466"}


id: PBO:0058837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8067","termid":"PBO:0058837"}


id: GO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of complement subcomponents C3b, iC3b and C4b by proteolytic cleavage.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement factor I activity (obsolete GO:0003818)","synonyms":[{"name":"C3b inactivator activity","type":"narrow"},{"name":"C3b/C4b inactivator activity","type":"related"},{"name":"C3bINA","type":"related"},{"name":"complement C3b inactivator","type":"related"},{"name":"complement C3b/C4b inactivator","type":"related"},{"name":"complement C4b inactivator","type":"related"},{"name":"complement C4bi","type":"related"},{"name":"complement component C3b inactivator activity","type":"related"},{"name":"complement factor I activity","type":"exact"},{"name":"conglutinogen-activating factor C","type":"related"},{"name":"factor I","type":"related"}],"termid":"GO:0003818"}


id: PBO:0088489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal export complex protein Arx1, peptidase family","termid":"PBO:0088489"}


id: GO:1904596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:krc","PMID:18245812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"regulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904596"}


id: PBO:0054155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1522","termid":"PBO:0054155"}


id: MOD:00871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with (2)H5-phenyl isocyanate.","definition_xrefs":["Unimod:412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenyl isocyanate derivatized residue","termid":"MOD:00870"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H5-phenyl isocyanate derivatized residue","synonyms":[{"name":"Phenylisocyanate:2H(5)","type":"related"},{"name":"d5-phenyl isocyanate","type":"related"}],"termid":"MOD:00871"}


id: PBO:0071641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 5","termid":"PBO:0071641"}


id: GO:1902240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:16571598","GOC:krc","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902220"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1902238"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902255"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"narrow"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"}],"termid":"GO:1902240"}


id: MONDO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germinoma (disease) that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"central nervous system germinoma","termid":"MONDO:0002999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain germinoma","secondary_identifiers":["UMLS:C1332606","MEDGEN:231457","NCIT:C6284","DOID:2127"],"synonyms":[{"name":"brain germinoma (disease)","type":"exact"},{"name":"germinoma of brain","type":"exact"},{"name":"germinoma of the brain","type":"exact"},{"name":"intracranial germinoma","type":"broad"}],"termid":"MONDO:0002214","xrefs":{"Monarch":{"xref_id":"0002214"}}}


id: PBO:0058570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-2","termid":"PBO:0058570"}


id: PBO:0038558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 1","termid":"PBO:0038558"}


id: PBO:0074959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-1","termid":"PBO:0074959"}


id: PBO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_G0_to_G1_transition","termid":"PBO:0031773"}


id: FYPO:0002258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"},{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles present in increased numbers","synonyms":[{"name":"fragmented vacuoles","type":"related"},{"name":"small vacuoles present in greater numbers","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size","type":"exact"}],"termid":"FYPO:0002258"}


id: PATO:0000948
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having a sinus or rounded lobe at the base.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart shaped","synonyms":[{"name":"cordate","type":"exact"},{"name":"cordiform","type":"exact"}],"termid":"PATO:0000948"}


id: PBO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex, non-SMC subunit Psc3","termid":"PBO:0001304"}


id: GO:0006434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. The seryl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a serine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"seryl-tRNA aminoacylation","termid":"GO:0006434"}


id: MONDO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular hyperemia","secondary_identifiers":["SCTID:359610006","DOID:1248","MEDGEN:509827","UMLS:C0155169"],"synonyms":[{"name":"hyperemia eye","type":"exact"},{"name":"hyperemia of conjunctiva","type":"exact"}],"termid":"MONDO:0001534","xrefs":{"Monarch":{"xref_id":"0001534"}}}


id: MONDO:0100213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked multiple congenital anomaly disorder with variable severity. The classic triad, which defines IFAP, is ichthyosis follicularis, atrichia, and photophobia. Some patients have additional features, including mental retardation, brain anomalies, Hirschsprung disease, corneal opacifications, kidney dysplasia, cryptorchidism, cleft palate, and skeletal malformations, particularly of the vertebrae, which constitutes BRESHECK syndrome.","definition_xrefs":["OMIM:308205"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with skin/mucosae involvement (obsolete MONDO:0015331)","termid":"MONDO:0015331"},{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 1, with or without BRESHECK syndrome","secondary_identifiers":["DOID:0111821","UMLS:C5399971","MEDGEN:1746744","NANDO:2200999","GARD:15297","MESH:C536085"],"synonyms":[{"name":"IFAP syndrome with or without BRESHECK syndrome","type":"exact"},{"name":"IFAP syndrome with or without BRESHECK syndrome, X-linked recessive","type":"exact"},{"name":"IFAP/BRESHECK syndrome","type":"exact"},{"name":"ichthyosis follicularis atrichia photophobia syndrome","type":"related"},{"name":"ichthyosis follicularis, atrichia, and photophobia with or without brain anomalies, retardation, ectodermal dysplasia, skeletal malformations, Hirschsprung disease, Ear/eye anomalies, cleft palate/cryptorchidism, and kidney dysplasia/hypoplasia","type":"exact"},{"name":"ichthyosis follicularis-alopecia-photophobia syndrome","type":"broad"}],"termid":"MONDO:0100213","xrefs":{"Monarch":{"xref_id":"0100213"}}}


id: GO:0060459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a left lung from an initial condition to its mature state. This process begins with the formation of the left lung and ends with the mature structure. The left lung is the lung which is on the left side of the anterior posterior axis looking from a dorsal to ventral aspect.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left lung development","synonyms":[{"name":"left pulmonary development","type":"exact"}],"termid":"GO:0060459"}


id: PBO:0060590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK cell activity associated lncRNA 1","termid":"PBO:0060590"}


id: PBO:0059982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 2","termid":"PBO:0059982"}


id: MONDO:1011909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal disease, non-human animal","secondary_identifiers":["OMIA:000856"],"termid":"MONDO:1011909","xrefs":{"Monarch":{"xref_id":"1011909"}}}


id: PBO:0068900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 142, pseudogene","termid":"PBO:0068900"}


id: GO:0030551
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030552"}]},"cv_name":"molecular_function","definition":"Binding to a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic nucleotide binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0030551","terms_by_termid":{"GO:0030552":null}}


id: PBO:0028694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_antisense_RNA_level","termid":"PBO:0028694"}


id: PBO:0064992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolylcarboxypeptidase","termid":"PBO:0064992"}


id: GO:0043748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoate + H2O = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate.","definition_xrefs":["PMID:8335646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-succinylbenzoate synthase activity","secondary_identifiers":["EC:4.2.1.113","RHEA:10196"],"termid":"GO:0043748"}


id: PBO:0088933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12/MIND complex Mis14/Nsl1","termid":"PBO:0088933"}


id: GO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"regulates","term_name":"myosin II filament disassembly","termid":"GO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of myosin II filament disassembly","termid":"GO:0043521"}


id: PBO:0083690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE16 has a paralog, ADE17, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083690"}


id: PBO:0036233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in DNA repair Rad8","termid":"PBO:0036233"}


id: FYPO:0001643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of tryptophan measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular tryptophan level","synonyms":[{"name":"normal cellular tryptophan level during mitotic cell cycle","type":"related"},{"name":"normal cellular tryptophan level during vegetative growth","type":"exact"},{"name":"normal level of tryptophan in cell","type":"exact"}],"termid":"FYPO:0001643"}


id: PBO:0081295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75D","termid":"PBO:0081295"}


id: PBO:0085728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation","termid":"PBO:0085728"}


id: MONDO:0017120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other syndrome with a central nervous system malformation as major feature (obsolete MONDO:0017120)","secondary_identifiers":["Orphanet:269531"],"termid":"MONDO:0017120","xrefs":{"Monarch":{"xref_id":"0017120"}}}


id: MONDO:0100286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bronciolitis caused by infection with respiratory syncytial virus.","definition_xrefs":["PMID:28722988","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory syncytial virus infectious disease","termid":"MONDO:0001577"},{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory syncytial virus bronchiolitis","secondary_identifiers":["MEDGEN:547277","UMLS:C0276340"],"synonyms":[{"name":"RSV bronchiolitis","type":"exact"}],"termid":"MONDO:0100286","xrefs":{"Monarch":{"xref_id":"0100286"}}}


id: MONDO:1012104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkin disease, non-human animal","termid":"MONDO:1011808"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hodgkin disease, dog","secondary_identifiers":["OMIA:000476-9615"],"termid":"MONDO:1012104","xrefs":{"Monarch":{"xref_id":"1012104"}}}


id: GO:1905159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GOC:TermGenie","PMID:617517","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Factor XII activation (obsolete GO:1905159)","synonyms":[{"name":"down regulation of Factor XII activation","type":"exact"},{"name":"down regulation of Hageman factor activation","type":"exact"},{"name":"down-regulation of Factor XII activation","type":"exact"},{"name":"down-regulation of Hageman factor activation","type":"exact"},{"name":"downregulation of Factor XII activation","type":"exact"},{"name":"downregulation of Hageman factor activation","type":"exact"},{"name":"inhibition of Factor XII activation","type":"narrow"},{"name":"inhibition of Hageman factor activation","type":"narrow"},{"name":"negative regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905159"}


id: FYPO:0005323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-free translesion synthesis is abnormal. Error-free translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across from the lesion.","definition_xrefs":["GO:0070987","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abnormal error-free translesion synthesis","synonyms":[{"name":"abnormal error-free translesion synthesis during mitotic cell cycle","type":"related"},{"name":"abnormal error-free translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005323"}


id: _global:interaction_relation_helper_property
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"helper_property_(not_for_use_in_curation)","termid":"_global:helper_property_(not_for_use_in_curation)"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_relation_helper_property","secondary_identifiers":["RO:0002563"],"termid":"_global:interaction_relation_helper_property"}


id: PBO:0073624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 10","termid":"PBO:0073624"}


id: PBO:0033795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_at_low_temperature","termid":"PBO:0033795"}


id: PBO:0089399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B dimer chaperone Chz1","termid":"PBO:0089399"}


id: GO:1902575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:24127216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"part_of","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0007010","GO:0030036","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring assembly","synonyms":[{"name":"protein localisation to cell division site involved in constriction ring assembly","type":"narrow"},{"name":"protein localisation to cell division site involved in contractile ring assembly","type":"exact"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin ring formation","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, contractile ring assembly","type":"related"},{"name":"protein localization to cell division site involved in constriction ring assembly","type":"narrow"},{"name":"protein localization to cell division site involved in contractile ring assembly","type":"exact"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin ring formation","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:1902575"}


id: PBO:0027810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_export_from_nucleus","termid":"PBO:0027810"}


id: MONDO:0014512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome due to a point mutation is a rare, genetic neurological disease, with a highly variable phenotype, typically characterized by neonatal hypotonia, respiratory and feeding difficulties, global development delay (often with nonverbal and frequently non-ambulatory progression) and myopathic facies. Other frequently present features include seizures (or seizure-like episodes), visual impairment and encephalopathy.","definition_xrefs":["Orphanet:438216"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome due to a point mutation","secondary_identifiers":["OMIM:616158","GARD:17740","DOID:0070061"],"synonyms":[{"name":"MRD31","type":"exact"},{"name":"PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome due to a point mutation","type":"exact"},{"name":"autosomal dominant intellectual disability 31","type":"exact"},{"name":"autosomal dominant mental retardation 31","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 31","type":"related"},{"name":"intellectual disability, autosomal dominant 31","type":"related"},{"name":"intellectual disability, autosomal dominant type 31","type":"exact"},{"name":"mental retardation, autosomal dominant 31","type":"related"},{"name":"mental retardation, autosomal dominant type 31","type":"exact"},{"name":"neurodevelopmental disorder with neonatal respiratory insufficiency, hypotonia, and feeding difficulties","type":"exact"}],"termid":"MONDO:0014512","xrefs":{"Monarch":{"xref_id":"0014512"}}}


id: MONDO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dracunculiasis (Guinea worm disease) is a neglected tropical disease (NTD) characterized by a painful burning skin lesion from which the Dracunculus medinensis parasite emerges approximately 1 year after infection resulting from consumption of unsafe drinking water containing parasite-infected copepods (Cyclops spp., microcrustacea also called water fleas).","definition_xrefs":["Orphanet:231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dracunculiasis","secondary_identifiers":["icd11.foundation:1662537619","NORD:1060","GARD:6286","SCTID:396334002","DOID:14418","MEDGEN:41653","EFO:0007241","MESH:D004320","NCIT:C84677","UMLS:C0013100","ICD10CM:B72","ICD9:125.7","MedDRA:10013618"],"synonyms":[{"name":"Dracunculosis","type":"exact"},{"name":"Dracunculus medinensis caused disease or disorder","type":"exact"},{"name":"Dracunculus medinensis disease or disorder","type":"exact"},{"name":"Dracunculus medinensis infectious disease","type":"exact"},{"name":"GWD","type":"related"},{"name":"Guinea worm disease","type":"exact"},{"name":"Guinea worm infection","type":"related"},{"name":"Medina worm disease","type":"exact"},{"name":"dracontiasis","type":"exact"},{"name":"infection by Dracunculus medinensis","type":"exact"},{"name":"medinensis","type":"exact"},{"name":"parasitic infection caused by Dracunculus medinensis","type":"related"}],"termid":"MONDO:0016472","xrefs":{"Monarch":{"xref_id":"0016472"}}}


id: GO:0044693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: trehalose(out) + H+(out) = trehalose(in) + H+(in).","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"trehalose:proton symporter activity","synonyms":[{"name":"trehalose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0044693"}


id: MONDO:0971178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 8","secondary_identifiers":["UMLS:C5935640","MEDGEN:1854762","OMIM:620903"],"termid":"MONDO:0971178","xrefs":{"Monarch":{"xref_id":"0971178"}}}


id: PBO:0085862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; CUE4 has a paralog, CUE1, that arose from the whole genome duplication","termid":"PBO:0085862"}


id: GO:0035484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/A mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adenine/adenine mispair binding","synonyms":[{"name":"A/A mispair binding","type":"exact"}],"termid":"GO:0035484"}


id: CHEBI:28786
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraquat dichloride","termid":"CHEBI:28786"}


id: MONDO:0013326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the SDCCAG8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"Senior-Loken syndrome 7","secondary_identifiers":["GARD:15681","OMIM:613615","UMLS:C3150877","MEDGEN:462227"],"synonyms":[{"name":"SDCCAG8 Senior-Loken syndrome","type":"exact"},{"name":"SENIOR-Loken syndrome 7","type":"related"},{"name":"SLSN7","type":"related"},{"name":"Senior-Loken syndrome 7","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in SDCCAG8","type":"exact"},{"name":"Senior-Loken syndrome type 7","type":"exact"}],"termid":"MONDO:0013326","xrefs":{"Monarch":{"xref_id":"0013326"}}}


id: MONDO:1010672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary macrothrombocytes and mild-to-moderate thrombocytopenia with a bleeding tendency in dogs due to a variation in the GP9 gene.","definition_xrefs":["PMID:31484196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"thrombopathia, dog","termid":"MONDO:1012273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bernard-Soulier syndrome, GP9-related, dog","secondary_identifiers":["OMIA:002207-9615"],"synonyms":[{"name":"Bernard-Soulier syndrome type C, dog","type":"related"},{"name":"hemorrhagiparous thrombocytic dystrophy, dog","type":"exact"}],"termid":"MONDO:1010672","xrefs":{"Monarch":{"xref_id":"1010672"}}}


id: MONDO:0957935
data:
  {"annotated_genes":["SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86615],"is_not":false,"summary":null,"term":"MONDO:0957935"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620583","MEDGEN:1849731","UMLS:C5882716"],"termid":"MONDO:0957935","terms_by_termid":{"MONDO:0957935":null},"xrefs":{"Monarch":{"xref_id":"0957935"}}}


id: FYPO:0000769
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119916,119411,119918,119911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[119705,119714,119709,119717,119701,119702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[119880],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"},{"relation_name":"output_of","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":11,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002403","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_04464","SJAG_03940","SJAG_01906","SJAG_03449","SJAG_01745"],"single_locus_genotype_uniquenames":["nem1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1delta","lem2delta","nem2delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal nuclear envelope morphology during mitotic cell cycle","type":"exact"},{"name":"abnormal nuclear membrane morphology","type":"narrow"}],"termid":"FYPO:0000769","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO_EXT:0000001":null}}


id: GO:0021993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which closure points are established at multiple points and along the neural rostrocaudal axis.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of neural tube closure","termid":"GO:0021993"}


id: PBO:0090365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope Ish domain protein Ish1","termid":"PBO:0090365"}


id: PBO:0041270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 2","termid":"PBO:0041270"}


id: PBO:0048483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase family member 7","termid":"PBO:0048483"}


id: PBO:0057918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3621","termid":"PBO:0057918"}


id: PBO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1979","termid":"PBO:0054577"}


id: GO:1990731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in the endonucleolytic cleavage of the damaged strand of DNA immediately 5' of a UV-induced damage site, and is the first part of a DNA repair process that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PMID:10704216"],"gene_count":0,"genotype_count":0,"name":"obsolete UV-damage excision repair, DNA incision (obsolete GO:1990731)","synonyms":[{"name":"DNA incision involved in AER","type":"related"},{"name":"DNA incision involved in UV-damage excision repair","type":"exact"},{"name":"DNA incision involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA incision involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA incision involved in UVER","type":"exact"},{"name":"DNA incision involved in alternative excision repair","type":"related"},{"name":"UV-damaged DNA endonuclease-dependent excision repair, DNA incision","type":"exact"},{"name":"UVDE-dependent excision repair, DNA incision","type":"exact"},{"name":"alternative excision repair, DNA incision","type":"related"},{"name":"nucleic acid cleavage involved in UV-damage excision repair","type":"exact"}],"termid":"GO:1990731"}


id: PBO:0063029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAIP1 pseudogene 1","termid":"PBO:0063029"}


id: PBO:0088650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, guanine nucleotide Ggc1","termid":"PBO:0088650"}


id: PBO:0081202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 3","termid":"PBO:0081202"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: MONDO:0007916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary intestinal lymphangiectasia (PIL) is a rare intestinal disease characterized by dilated intestinal lacteals which cause lymph leakage into the small bowel lumen. Clinical manifestations include edema related to hypoalbuminemia (protein-losing enteropathy), asthenia, diarrhea, lymphedema and failure to thrive in children.","definition_xrefs":["Orphanet:90362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal lymphangiectasia","termid":"MONDO:0018178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"primary intestinal lymphangiectasia","secondary_identifiers":["GARD:7873","OMIM:152800","SCTID:6124009","UMLS:C2931241","icd11.foundation:52162548","MEDGEN:444009","ICD9:457.1","NORD:1609"],"synonyms":[{"name":"Waldmann disease","type":"exact"},{"name":"Waldmann's disease","type":"related"},{"name":"familial Waldmann's disease (type)","type":"related"},{"name":"lymphangiectasia, intestinal","type":"related"},{"name":"primary intestinal lymphangiectasis","type":"related"}],"termid":"MONDO:0007916","xrefs":{"Monarch":{"xref_id":"0007916"}}}


id: PR:Q9Y7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.06 gene.","definition_xrefs":["UniProtKB:Q9Y7S5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C569.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.06","synonyms":[{"name":"Spom972h-SPCC569.06","type":"exact"}],"termid":"PR:Q9Y7S5"}


id: MONDO:0006761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by fibrous thickening of the arterial wall resulting in narrowing of the arterial lumen. It most often affects the renal artery and less often the carotid artery and abdominal arteries. It can cause hypertension and aneurysm formation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromuscular dysplasia","secondary_identifiers":["MEDGEN:4700","OMIM:135580","UMLS:C0016052","MESH:D005352","MESH:C537929","Orphanet:336","MedDRA:10054794","EFO:1000938","NCIT:C84714"],"synonyms":[{"name":"FMDA","type":"exact"},{"name":"fibromuscular dysplasia","type":"exact"},{"name":"fibromuscular dysplasia of arteries","type":"exact"}],"termid":"MONDO:0006761","xrefs":{"Monarch":{"xref_id":"0006761"}}}


id: MONDO:1012529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recurrent inflammatory pulmonary disease, non-human animal","termid":"MONDO:1011932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent inflammatory pulmonary disease, dog","secondary_identifiers":["OMIA:002205-9615"],"termid":"MONDO:1012529","xrefs":{"Monarch":{"xref_id":"1012529"}}}


id: GO:0047872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + dolichol = CoA + dolichyl palmitate.","definition_xrefs":["MetaCyc:DOLICHOL-O-ACYLTRANSFERASE-RXN","EC:2.3.1.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dolichol O-acyltransferase activity","secondary_identifiers":["RHEA:16685"],"synonyms":[{"name":"acyl-CoA:dolichol acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:dolichol O-palmitoyltransferase activity","type":"related"}],"termid":"GO:0047872"}


id: GO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 = 2-formamidobenzaldehyde.","definition_xrefs":["EC:1.13.11.17","RHEA:11212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"indole 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:INDOLE-23-DIOXYGENASE-RXN","KEGG_REACTION:R02338"],"synonyms":[{"name":"IDO","type":"related"},{"name":"indole oxidase activity","type":"related"},{"name":"indole-oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"indole:O2 oxidoreductase activity","type":"related"},{"name":"indole:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047719"}


id: PBO:0085422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane t-SNARE; involved in fusion of secretory vesicles at the plasma membrane and in vesicle fusion during sporulation; forms a complex with Sec9p that binds v-SNARE Snc2p; syntaxin homolog; functionally redundant with Sso2p; SSO1 has a paralog, SSO2, that arose from the whole genome duplication","termid":"PBO:0085422"}


id: GO:0000162
data:
  {"annotated_genes":["SJAG_02505","SJAG_03167","SJAG_01455","SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73646,74592,77557,79588],"is_not":false,"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; L-tryptophan is synthesized from chorismate via anthranilate.","definition_xrefs":["GOC:mah","ISBN:0471331309","MetaCyc:TRPSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"indolalkylamine biosynthetic process","termid":"GO:0046219"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process","termid":"GO:1902223"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-tryptophan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0009096"],"synonyms":[{"name":"L-tryptophan anabolism","type":"exact"},{"name":"L-tryptophan biosynthesis","type":"exact"},{"name":"aromatic amino acid family biosynthetic process, anthranilate pathway","type":"exact"},{"name":"tryptophan biosynthetic process","type":"related"},{"name":"tryptophan formation","type":"exact"},{"name":"tryptophan synthesis","type":"related"}],"termid":"GO:0000162","terms_by_termid":{"GO:0000162":null}}


id: PBO:0089835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Brc1-like","termid":"PBO:0089835"}


id: PBO:0044025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 beta","termid":"PBO:0044025"}


id: PBO:0063235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha cluster, complex locus","termid":"PBO:0063235"}


id: GO:0097080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic selenite (HSeO3-1 at physiological pH) across a plasma membrane.","definition_xrefs":["GOC:mcc","PMID:20861301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"plasma membrane selenite transport","synonyms":[{"name":"plasma membrane hydrogenselenite transport","type":"exact"}],"termid":"GO:0097080"}


id: PBO:0113472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; BIT2 has a paralog, BIT61, that arose from the whole genome duplication","termid":"PBO:0113472"}


id: MONDO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial trisomy of the short arm of chromosome 9 (obsolete MONDO:0016946)","termid":"MONDO:0016946","xrefs":{"Monarch":{"xref_id":"0016946"}}}


id: FYPO:0008174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 16 of histone H4 in silent mating-type cassettes occurs to a higher extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008174"}


id: GO:0010709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules resulting in the error-free repair of a double-strand break without the exchange of adjacent sequences.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteroduplex formation","termid":"GO:0030491"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"heteroduplex formation involved in double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0010709"}


id: GO:1902495
data:
  {"annotated_genes":["SJAG_00915","SJAG_01490","SJAG_02504","SJAG_01355","SJAG_MIT13","SJAG_02023","SJAG_00755","SJAG_03962","SJAG_01817","SJAG_02782","SJAG_01471","SJAG_04955","SJAG_03406","SJAG_MIT15","SJAG_01190","SJAG_00212","SJAG_00976","SJAG_04122","SJAG_01913","SJAG_02646","SJAG_03925","SJAG_07007","SJAG_00985","SJAG_01447","SJAG_05229","SJAG_MIT20","SJAG_04675","SJAG_00542","SJAG_05629","SJAG_01077","SJAG_00133","SJAG_04015","SJAG_00136","SJAG_00080","SJAG_01397","SJAG_04677","SJAG_07003","SJAG_00516","SJAG_02598","SJAG_MIT03","SJAG_03337","SJAG_MIT04","SJAG_05294","SJAG_00836","SJAG_03490","SJAG_07006","SJAG_05204","SJAG_00601","SJAG_MIT37","SJAG_01763","SJAG_MIT09","SJAG_02564","SJAG_00438","SJAG_03114","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78266,78025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[108215,57854,119371,103997,60507,66810,67463,64510,116146,57296,60044,64006,119360,67132,95177,65242,119366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[117984,119356,72450,113709,76035,104394,61897,76189,74067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045275"},{"annotations":[114959,115759,72378,108598,114531,89563,119329,119351,74651,68200,119379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045277"},{"annotations":[62012,104226,92389,95982,90498,96164,100267],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[119026,96941,99239,60650,88377,110180,71570,102987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"},{"annotations":[74817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex which enables the transfer of a substance from one side of a membrane to the other.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:18024586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00438":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02782":null,"SJAG_03114":null,"SJAG_03337":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03925":null,"SJAG_03962":null,"SJAG_04015":null,"SJAG_04122":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04955":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transmembrane transporter complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:1902495","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0005891":null,"GO:0033573":null,"GO:0045259":null,"GO:0045275":null,"GO:0045277":null}}


id: GO:0032580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi cisterna membrane","synonyms":[{"name":"Golgi apparatus cisterna membrane","type":"exact"},{"name":"Golgi stack membrane","type":"exact"}],"termid":"GO:0032580"}


id: PBO:0058561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6503","termid":"PBO:0058561"}


id: PBO:0030398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030398"}


id: GO:0016062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a rhodopsin-mediated signaling pathway is adjusted to modulate the sensitivity and response of a visual system to light stimuli (that might vary over more than 6 magnitudes in intensity) without response saturation.","definition_xrefs":["PMID:1962207"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation of rhodopsin mediated signaling (obsolete GO:0016062)","synonyms":[{"name":"adaptation of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016062"}


id: PBO:0055073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2490","termid":"PBO:0055073"}


id: GO:1990135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavonoid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated flavonoid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a flavonoid acceptor, producing the sulfated flavonoid derivative.","definition_xrefs":["PMID:23611783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"flavonoid sulfotransferase activity","termid":"GO:1990135"}


id: PBO:0086520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps dubious ORF YFL015W-A; YFL015C is not an essential gene","termid":"PBO:0086520"}


id: MONDO:0006563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Seborrheic keratosis that arises from follicular structures in the skin. It presents as a solitary nodule in the skin and is characterized by the presence of prominent squamous eddies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic keratosis","termid":"MONDO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"inverted follicular keratosis","secondary_identifiers":["Wikipedia:Inverted_follicular_keratosis","SCTID:394728005","NCIT:C9007","DOID:6945","EFO:1000717","icd11.foundation:2109084329","ICD9:264.8","MEDGEN:87190","UMLS:C0334019"],"synonyms":[{"name":"inverted folicular keratosis","type":"exact"},{"name":"inverted follicular keratosis","type":"exact"}],"termid":"MONDO:0006563","xrefs":{"Monarch":{"xref_id":"0006563"}}}


id: MONDO:0019020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PANDAS is an acronym for Pediatric Autoimmune Neuropsychiatric Disorders Associated with a group A beta-hemolytic Streptococcal infection and applied to a subgroup of children with obsessive-compulsive disorder (OCD) and/or tic disorders.","definition_xrefs":["Orphanet:66624"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete postinfectious autoimmune disease with chorea (obsolete MONDO:0017647)","termid":"MONDO:0017647"},{"relation_name":"is_a","term_name":"autoimmune disorder of the nervous system","termid":"MONDO:0002977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"PANDAS","secondary_identifiers":["GARD:7312","MEDGEN:419798","UMLS:C2931429","MESH:C537163"],"synonyms":[{"name":"paediatric autoimmune disorders associated with Streptococcus infections","type":"exact"},{"name":"paediatric autoimmune neuropsychiatric disorder associated with Streptococcus","type":"related"},{"name":"paediatric autoimmune neuropsychiatric disorders associated with Streptococcus infections","type":"exact"},{"name":"paediatric autoimmune neuropsychiatric disorders associated with streptococcal infections","type":"related"},{"name":"pediatric autoimmune disorders associated with Streptococcus infections","type":"exact"},{"name":"pediatric autoimmune neuropsychiatric disorder associated with Streptococcus","type":"related"},{"name":"pediatric autoimmune neuropsychiatric disorders associated with Streptococcus infections","type":"exact"},{"name":"pediatric autoimmune neuropsychiatric disorders associated with streptococcal infections","type":"related"}],"termid":"MONDO:0019020","xrefs":{"Monarch":{"xref_id":"0019020"}}}


id: RO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x lumen_of y iff x is the space or substance that is part of y and does not cross any of the inner membranes or boundaries of y that is maximal with respect to the volume of the convex hull.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumen_of","termid":"RO:0002571"}


id: MONDO:0850071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay-immunodeficiency-leukoencephalopathy-hypohomocysteinemia syndrome","secondary_identifiers":["MEDGEN:1842938","GARD:22468","UMLS:C5681830","Orphanet:619979"],"termid":"MONDO:0850071","xrefs":{"Monarch":{"xref_id":"0850071"}}}


id: GO:0003099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which increases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:0003099"}


id: PBO:0005873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine, mitochondrial","termid":"PBO:0005873"}


id: FYPO:0001434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of N,N'-(p-xylylidene)bis-aminoguanidine 2HCl than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl","synonyms":[{"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl during mitotic cell cycle","type":"related"},{"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl during vegetative growth","type":"exact"},{"name":"resistant to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl","type":"exact"}],"termid":"FYPO:0001434"}


id: MONDO:0036218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","termid":"MONDO:0032931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome due to biallelic deletions in the ATAD3 gene cluster","secondary_identifiers":["GARD:18037","Orphanet:615986","UMLS:C5680385","MEDGEN:1843311"],"synonyms":[{"name":"Lethal 1p36.33 deletion syndrome","type":"exact"}],"termid":"MONDO:0036218","xrefs":{"Monarch":{"xref_id":"0036218"}}}


id: GO:0002562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through recombination of the germline genetic elements within a single genetic locus.","definition_xrefs":["PMID:16166509","ISBN:0781735149","GOC:add","PMID:16102575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}


id: PR:O74788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iml1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane-associated protein iml1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.04c","synonyms":[{"name":"Spom972h-iml1","type":"exact"}],"termid":"PR:O74788"}


id: SO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an exon.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_region","synonyms":[{"name":"exon region","type":"exact"}],"termid":"SO:0000852"}


id: GO:0071688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"myosin filament assembly","termid":"GO:0031034"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0065003","GO:0008150","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"}


id: PBO:0062762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily P member 2 pseudogene","termid":"PBO:0062762"}


id: GO:1905435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K4 trimethylation.","definition_xrefs":["GOC:TermGenie","PMID:27541139","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K4 trimethylation (obsolete GO:1905435)","termid":"GO:1905435"}


id: PR:Q10219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.12c gene.","definition_xrefs":["UniProtKB:Q10219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.12c","synonyms":[{"name":"Spom972h-SPAC4H3.12c","type":"exact"}],"termid":"PR:Q10219"}


id: PBO:0078069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 59 (non-functional)","termid":"PBO:0078069"}


id: MONDO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome which occurs as a result of the occlusion of one of the vertebral arteries. It may be caused by atherosclerosis, embolism or hemorrhage. Collateral circulation through the circle of Willis is usually comprised as well. Clinical signs may include vertigo, nystagmus, dysarthria, ataxia and sensorimotor deficits. Clinical course may lead to persistence of neurologic deficits. Prognosis is variable with a substantial risk for recurrent infarction.","definition_xrefs":["NCIT:C35123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"transient ischemic attack","termid":"MONDO:0005264"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery insufficiency","secondary_identifiers":["SCTID:34781003","UMLS:C0042560","MEDGEN:22638","MESH:D014715","ICD9:435.1","DOID:13095"],"synonyms":[{"name":"vertebral artery syndrome","type":"exact"}],"termid":"MONDO:0001631","xrefs":{"Monarch":{"xref_id":"0001631"}}}


id: PBO:0079594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene)","termid":"PBO:0079594"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: PBO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein","termid":"PBO:0001733"}


id: MONDO:0018188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary intestinal polyposis (obsolete MONDO:0018188)","secondary_identifiers":["Orphanet:363314"],"synonyms":[{"name":"familial intestinal polyposis","type":"exact"},{"name":"genetic intestinal polyposis","type":"exact"}],"termid":"MONDO:0018188","xrefs":{"Monarch":{"xref_id":"0018188"}}}


id: MONDO:0859515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 10b, mild variant","secondary_identifiers":["UMLS:C3541476","DOID:0081345","MEDGEN:762102","OMIM:620249"],"termid":"MONDO:0859515","xrefs":{"Monarch":{"xref_id":"0859515"}}}


id: PBO:0083199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene MMS4","termid":"PBO:0083199"}


id: PBO:0028911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_horsetail_nucleus_morphology","termid":"PBO:0028911"}


id: GO:0000379
data:
  {"annotated_genes":["SJAG_00754","SJAG_04907","SJAG_03328","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71683,73279,74249,79338],"is_not":false,"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"RNA processing that begins when the tertiary structure of a tRNA type intron is recognized, and ends when the endonucleolytic cleavage of the RNA at both the 5' and 3' splice sites occurs.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA-type intron splice site recognition and cleavage","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000379","terms_by_termid":{"GO:0000379":null}}


id: MONDO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute life-threatening systemic bacterial noncontagious illness caused by exotoxins from bacteria of either the Streptococcus pyogenes or Staphylococcus aureus type. It is characterized by high fever, hypotension, rash, multi-organ dysfunction, and cutaneous desquamation during the early convalescent period. The toxins affect the host immune system, causing an exuberant and pathological host inflammatory response. Laboratory findings include leukocytosis, elevated prothrombin time, hypoalbuminemia, hypocalcemia, and pyuria.","definition_xrefs":["NCIT:C35498","Wikipedia:Toxic_shock_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic shock syndrome","secondary_identifiers":["icd11.foundation:114886962","ICD9:040.82","ICD10CM:A48.3","DOID:14115","MEDGEN:109414","MESH:D012772","NORD:1782","UMLS:C0600327","GARD:9560","Orphanet:36234","SCTID:18504008"],"synonyms":[{"name":"TSS","type":"exact"},{"name":"TSS, toxic shock syndrome","type":"exact"},{"name":"bacterial TSS","type":"exact"},{"name":"bacterial toxic-shock syndrome","type":"exact"},{"name":"shock syndrome (TSS), toxic","type":"exact"},{"name":"staphylococcal toxic shock syndrome","type":"related"},{"name":"syndrome (TSS), toxic shock","type":"exact"},{"name":"toxic shock","type":"exact"},{"name":"toxic shock syndrome","type":"exact"},{"name":"toxic shock syndrome, (TSS)","type":"exact"}],"termid":"MONDO:0001881","xrefs":{"Monarch":{"xref_id":"0001881"}}}


id: PBO:0117086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA2 antisense RNA 2","termid":"PBO:0117086"}


id: GO:0120282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume that is enclosed within the autolysosome single-membrane.","definition_xrefs":["PMID:17182262","PMID:26382870","PMID:24657946","GOC:krc","GOC:nhn","PMID:32047650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autolysosome","termid":"GO:0044754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"autolysosome lumen","termid":"GO:0120282"}


id: PBO:0070077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 34, pseudogene","termid":"PBO:0070077"}


id: FYPO:0002789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed when the population in which the cell is found is in stationary phase in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles during stationary phase","synonyms":[{"name":"decreased vacuole size during stationary phase","type":"exact"},{"name":"reduced vacuole size during stationary phase","type":"exact"}],"termid":"FYPO:0002789"}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: MONDO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the prostate gland and has spread to other anatomic sites.","definition_xrefs":["NCIT:C8946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic prostate carcinoma","secondary_identifiers":["SCTID:314994000","ICD9:199.1","UMLS:C0936223","EFO:0000196","MEDGEN:215232"],"synonyms":[{"name":"metastatic prostate cancer","type":"exact"},{"name":"metastatic prostate carcinoma","type":"exact"},{"name":"prostate cancer metastatic","type":"exact"},{"name":"prostate carcinoma metastatic","type":"exact"}],"termid":"MONDO:0004956","xrefs":{"Monarch":{"xref_id":"0004956"}}}


id: PBO:0086476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; null mutant is viable","termid":"PBO:0086476"}


id: MONDO:0005606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating adenocarcinoma in which the malignant cells form tubular structures. Representative examples include the tubular breast carcinoma and the gastric tubular adenocarcinoma.","definition_xrefs":["NCIT:C65192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tubular adenocarcinoma","secondary_identifiers":["UMLS:C0205645","DOID:4929","EFO:0006500","ICDO:8211/3","MEDGEN:61428"],"synonyms":[{"name":"carcinoma, tubular cell, malignant","type":"exact"},{"name":"tubular adenocarcinoma","type":"exact"},{"name":"tubular adenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"tubular carcinoma","type":"exact"}],"termid":"MONDO:0005606","xrefs":{"Monarch":{"xref_id":"0005606"}}}


id: PBO:0066860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 160","termid":"PBO:0066860"}


id: PBO:0056010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 1","termid":"PBO:0056010"}


id: FYPO:0004834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased during a cellular response to adenine starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"increased phosphatase activity during cellular response to adenine starvation","synonyms":[{"name":"increased phosphatase activity during adenine starvation","type":"exact"}],"termid":"FYPO:0004834"}


id: PBO:0066279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member C, pseudogene","termid":"PBO:0066279"}


id: MONDO:0013414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RGR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 44","secondary_identifiers":["MEDGEN:462418","OMIM:613769","GARD:15705","ICD10CM:H35.5","UMLS:C3151068","DOID:0110394"],"synonyms":[{"name":"RGR retinitis pigmentosa","type":"exact"},{"name":"RP44","type":"exact"},{"name":"retinitis pigmentosa 44","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RGR","type":"exact"},{"name":"retinitis pigmentosa type 44","type":"exact"}],"termid":"MONDO:0013414","xrefs":{"Monarch":{"xref_id":"0013414"}}}


id: GO:0150155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-34 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:26754294","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-34 production","termid":"GO:0150155"}


id: MONDO:0006524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acrodermatitis characterized by a chronically progressive course, leading to widespread atrophy of the skin. It is a clinical manifestation of Lyme borreliosis.","definition_xrefs":["DOID:0060344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodermatitis","termid":"MONDO:0006523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acrodermatitis chronica atrophicans","secondary_identifiers":["ICD10CM:L90.4","ICD9:701.8","icd11.foundation:1761234822","MEDGEN:537873","SCTID:4340003","UMLS:C0263421","EFO:1000665"],"synonyms":[{"name":"Herxheimer disease","type":"exact"},{"name":"primary diffuse atrophy","type":"exact"}],"termid":"MONDO:0006524","xrefs":{"Monarch":{"xref_id":"0006524"}}}


id: PBO:0053912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1206","termid":"PBO:0053912"}


id: MONDO:0022205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pustular psoriasis","secondary_identifiers":["MEDGEN:508876","icd11.foundation:64081271","NANDO:2100285","SCTID:200973000","NANDO:2201001","NANDO:1200240","ICD9:696.1","UMLS:C0152081"],"synonyms":[{"name":"Pustular psoriasis","type":"related"},{"name":"pustular psoriasis","type":"exact"}],"termid":"MONDO:0022205","xrefs":{"Monarch":{"xref_id":"0022205"}}}


id: PBO:0053627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 671","termid":"PBO:0053627"}


id: PBO:0042032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 88A","termid":"PBO:0042032"}


id: PBO:0026797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_regulatory_particle_binding","termid":"PBO:0026797"}


id: PBO:0059920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 6","termid":"PBO:0059920"}


id: MONDO:1011113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in Arabian camel.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, Arabian camel","secondary_identifiers":["OMIA:000243-9838"],"termid":"MONDO:1011113","xrefs":{"Monarch":{"xref_id":"1011113"}}}


id: FYECO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Biotin was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin absent","termid":"FYECO:0000192"}


id: GO:0030129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin coat found on a synaptic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin vesicle coat","termid":"GO:0030125"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"clathrin coat of synaptic vesicle","termid":"GO:0030129"}


id: PBO:0088808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti12","termid":"PBO:0088808"}


id: GO:0033192
data:
  {"annotated_genes":["SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79865],"is_not":false,"summary":null,"term":"GO:0033192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate, dependent on the presence of calcium-bound calmodulin.","definition_xrefs":["GOC:mah","PMID:15359118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-dependent protein serine/threonine phosphatase activity","termid":"GO:0004723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004721","GO:0016787","GO:0016788","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"calmodulin-dependent protein phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2730849","Reactome:R-HSA-4551451"],"synonyms":[{"name":"Ca2+/CaM-dependent protein phosphatase activity","type":"related"},{"name":"calcineurin activity","type":"narrow"},{"name":"calcium- and calmodulin-dependent protein phosphatase activity","type":"exact"},{"name":"calcium/calmodulin-dependent protein phosphatase activity","type":"exact"}],"termid":"GO:0033192","terms_by_termid":{"GO:0033192":null}}


id: PBO:0076180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 4A member 1","termid":"PBO:0076180"}


id: PBO:0068723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 12, pseudogene","termid":"PBO:0068723"}


id: GO:1990029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythmical contraction and relaxation of arterioles, observed as slow and fast waves, with frequencies of 1-2 and 10-20 cpm.","definition_xrefs":["PMID:14993429","PMID:1932763","GOC:sl","PMID:15678091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasomotion","termid":"GO:1990029"}


id: GO:0050950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of melanocyte differentiation","termid":"GO:0045636"},{"relation_name":"is_a","term_name":"regulation of late stripe melanocyte differentiation","termid":"GO:0050940"},{"relation_name":"positively_regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of late stripe melanocyte differentiation","synonyms":[{"name":"activation of late stripe melanocyte differentiation","type":"narrow"},{"name":"positive regulation of late stripe melanophore differentiation","type":"exact"},{"name":"stimulation of late stripe melanocyte differentiation","type":"narrow"},{"name":"up regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"up-regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"upregulation of late stripe melanocyte differentiation","type":"exact"}],"termid":"GO:0050950"}


id: PATO:0001242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the distance between repeating units of a wave pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wavelength","termid":"PATO:0001242"}


id: GO:0071838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the bone marrow.","definition_xrefs":["GOC:yaf","PMID:17063141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in bone marrow","synonyms":[{"name":"bone marrow cell proliferation","type":"exact"}],"termid":"GO:0071838"}


id: GO:0014868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which cross bridges are broken and reformed during filament sliding as part of the regulation of the velocity of shortening in skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cross bridge cycling involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014868"}


id: PBO:0053374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 299","termid":"PBO:0053374"}


id: GO:0042689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of crystal cell differentiation","termid":"GO:0042689"}


id: PBO:0064928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 2","termid":"PBO:0064928"}


id: GO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A G protein-coupled receptor that is structurally/functionally related to the secretin receptor.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete secretin-like receptor activity (obsolete GO:0001633)","synonyms":[{"name":"class B G protein coupled receptor","type":"exact"},{"name":"class B G-protein coupled receptor","type":"exact"},{"name":"class B GPCR","type":"exact"},{"name":"class B orphan receptor activity","type":"exact"},{"name":"secretin-like receptor activity","type":"exact"}],"termid":"GO:0001633"}


id: GO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"positively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis","synonyms":[{"name":"activation of positive chemotaxis","type":"narrow"},{"name":"stimulation of positive chemotaxis","type":"narrow"},{"name":"up regulation of positive chemotaxis","type":"exact"},{"name":"up-regulation of positive chemotaxis","type":"exact"},{"name":"upregulation of positive chemotaxis","type":"exact"}],"termid":"GO:0050927"}


id: PBO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein Urm1 (predicted)","termid":"PBO:0005054"}


id: MONDO:0022236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colpocephaly is a congenital brain abnormality in which the occipital horns - the posterior or rear portion of the lateral ventricles (cavities) of the brain - are larger than normal because white matter in the posterior cerebrum has failed to develop or thicken.","definition_xrefs":["GARD:0010008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colpocephaly","secondary_identifiers":["icd11.foundation:845275248","MEDGEN:98131","MONDO:0022808","MESH:C535973","SCTID:253160006","UMLS:C0431384"],"termid":"MONDO:0022236","xrefs":{"Monarch":{"xref_id":"0022236"}}}


id: GO:1902771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["PMID:7576634","GOC:mr","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of choline O-acetyltransferase activity (obsolete GO:1902771)","synonyms":[{"name":"activation of CHOACTase activity","type":"narrow"},{"name":"activation of acetyl-CoA:choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline acetylase activity","type":"narrow"},{"name":"activation of choline acetyltransferase activity","type":"narrow"},{"name":"positive regulation of CHOACTase activity","type":"exact"},{"name":"positive regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"positive regulation of choline acetylase activity","type":"exact"},{"name":"positive regulation of choline acetyltransferase activity","type":"exact"},{"name":"up regulation of CHOACTase activity","type":"exact"},{"name":"up regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline acetylase activity","type":"exact"},{"name":"up regulation of choline acetyltransferase activity","type":"exact"},{"name":"up-regulation of CHOACTase activity","type":"exact"},{"name":"up-regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline acetylase activity","type":"exact"},{"name":"up-regulation of choline acetyltransferase activity","type":"exact"},{"name":"upregulation of CHOACTase activity","type":"exact"},{"name":"upregulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline acetylase activity","type":"exact"},{"name":"upregulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902771"}


id: MONDO:0009012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant hyperthermia-arthrogryposis-torticollisis an extremely rare arthrogryposis syndrome, described in only two pairs of siblings from two unrelated families to date, and characterized by the association of arthrogryposis, congenital torticollis, dysmorphic facial features (i.e. asymmetry of the face, myopathic facial movements, ptosis, posteriorly rotated ears, cleft palate), progressive scoliosis and episodes of malignant hyperthermia. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:2215"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"multiple pterygium-malignant hyperthermia syndrome","secondary_identifiers":["GARD:3361","MEDGEN:347490","OMIM:217150","UMLS:C1857576","MESH:C565679"],"synonyms":[{"name":"contractures, congenital, torticollis, and malignant hyperthermia","type":"related"},{"name":"froster-Iskenius-Waterson syndrome","type":"related"},{"name":"froster-Iskenius-Waterson-Hall syndrome","type":"exact"},{"name":"malignant hyperthermia - arthrogryposis - torticollis","type":"related"},{"name":"malignant hyperthermia arthrogryposis torticollis","type":"related"},{"name":"malignant hyperthermia-arthrogryposis-torticollis syndrome","type":"exact"}],"termid":"MONDO:0009012","xrefs":{"Monarch":{"xref_id":"0009012"}}}


id: PBO:0056173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maelstrom spermatogenic transposon silencer","termid":"PBO:0056173"}


id: MONDO:0002907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation or presence of a blood clot (thrombus) in a blood vessel within the skull. Intracranial thrombosis can lead to thrombotic occlusions and brain infarction. The majority of the thrombotic occlusions are associated with atherosclerosis.","definition_xrefs":["MESH:D020767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial thrombosis","secondary_identifiers":["MEDGEN:199820","UMLS:C0752143","ICD9:434.00","ICD9:434.0","DOID:4193","SCTID:71444005"],"synonyms":[{"name":"cerebral thrombosis","type":"exact"}],"termid":"MONDO:0002907","xrefs":{"Monarch":{"xref_id":"0002907"}}}


id: GO:2000887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucuronoarabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronoarabinoxylan metabolic process","termid":"GO:0010414"},{"relation_name":"is_a","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"},{"relation_name":"is_a","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"glucuronoarabinoxylan catabolic process","synonyms":[{"name":"glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000887"}


id: PBO:0052256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 3","termid":"PBO:0052256"}


id: PBO:0074408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 2","termid":"PBO:0074408"}


id: MONDO:0030505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 8","secondary_identifiers":["UMLS:C5562045","MEDGEN:1794255","OMIM:619662"],"synonyms":[{"name":"PFIC8","type":"exact"}],"termid":"MONDO:0030505","xrefs":{"Monarch":{"xref_id":"0030505"}}}


id: GO:0051123
data:
  {"annotated_genes":["SJAG_02691","SJAG_02458","SJAG_01475","SJAG_03095","SJAG_01808","SJAG_01523","SJAG_03900","SJAG_04654","SJAG_04274","SJAG_01771","SJAG_00741","SJAG_02174","SJAG_00766","SJAG_03285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67586,70863,71059,71708,72299,74049,74846,75298,75969,77208,77614,94481],"is_not":false,"summary":null,"term":"GO:0051123"},{"annotations":[90049,79926],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on gene promoter through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC) (which may include TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIIH complexes). The PIC engages RNA polymerase II on its DNA template strand and sparks polymerization of the first few RNA nucleotides of the nascent transcript, of which 8 are base-paired with the DNA template within a DNA bubble. PIC assembly may result in a pause step, which marks the end of the PIC assembly and may be followed by promoter clearance (exact synonym: promoter escape). For RNA polymerase II PIC assembly is preceded by the formation of a nucleosome-free region that allows the transcription machinery to access the promoter DNA.","definition_xrefs":["GOC:txnOH","PMID:15020047","PMID:31300188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription preinitiation complex assembly","termid":"GO:0070897"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00741":null,"SJAG_00766":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02691":null,"SJAG_03095":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_04274":null,"SJAG_04654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0065003","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase II preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA polymerase II transcription PIC biosynthesis","type":"exact"},{"name":"RNA polymerase II transcription PIC formation","type":"exact"},{"name":"RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"RNA polymerase II transcriptional preinitiation complex formation","type":"exact"}],"termid":"GO:0051123","terms_by_termid":{"GO:0045899":null,"GO:0051123":null}}


id: FYPO:0004241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA replication is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of DNA replication during vegetative growth","termid":"FYPO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of DNA replication during cellular response to DNA damage","synonyms":[{"name":"decreased rate of DNA replication during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased rate of DNA replication during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"decreased rate of DNA replication in response to DNA damage","type":"related"},{"name":"reduced rate of DNA replication during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004241"}


id: PBO:0057571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 766","termid":"PBO:0057571"}


id: PBO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping exoribonuclease","termid":"PBO:0045660"}


id: MONDO:0017799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome affecting females. It is characterized by pleural effusion, ascites and non-malignant ovarian neoplasm. This syndrome usually follows a benign course. Prognosis is favorable following surgical resection of the ovarian mass.","definition_xrefs":["NCIT:C3223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meigs syndrome","secondary_identifiers":["MEDGEN:6287","MESH:D008539","Orphanet:314451","SCTID:63402005","ICD9:629.89","icd11.foundation:1050919535","MedDRA:10027139","GARD:21372","UMLS:C0025184"],"synonyms":[{"name":"Demons-Meigs syndrome","type":"exact"},{"name":"Meigs' syndrome","type":"exact"}],"termid":"MONDO:0017799","xrefs":{"Monarch":{"xref_id":"0017799"}}}


id: MONDO:0012975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GJB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 3B","secondary_identifiers":["GARD:18130","UMLS:C2675237","OMIM:612643","MESH:C567215","MEDGEN:436382","DOID:0110565"],"synonyms":[{"name":"DFNA3B","type":"narrow"},{"name":"GJB6 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 3B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 3B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GJB6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 3B","type":"narrow"},{"name":"deafness, autosomal dominant 3B","type":"narrow"},{"name":"deafness, autosomal dominant 3b","type":"narrow"},{"name":"deafness, autosomal dominant type 3B","type":"narrow"}],"termid":"MONDO:0012975","xrefs":{"Monarch":{"xref_id":"0012975"}}}


id: GO:0033454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"GCC codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033454"}


id: PATO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000313 color saturation value (obsolete PATO:0000313)","termid":"PATO:0000313"}


id: GO:0035662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 4 protein, a pattern recognition receptor that binds bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18304834","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor 4 binding","synonyms":[{"name":"TLR4 binding","type":"exact"}],"termid":"GO:0035662"}


id: FYPO:0003539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) over the entire length of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"decreased global homologous chromosome pairing","synonyms":[{"name":"decreased generalised homologous chromosome pairing","type":"exact"},{"name":"decreased global homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased global synapsis","type":"exact"},{"name":"globally decreased homologous chromosome pairing","type":"exact"},{"name":"reduced global homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003539"}


id: PBO:0087887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand","termid":"PBO:0087887"}


id: PBO:0083246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; gene expression induced by heat","termid":"PBO:0083246"}


id: PBO:0017984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex subunit Tom5 (predicted)","termid":"PBO:0017984"}


id: PBO:0029295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G0_to_G1_transition","termid":"PBO:0029295"}


id: PBO:0049046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37","termid":"PBO:0049046"}


id: PBO:0083188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YIL177C","termid":"PBO:0083188"}


id: MONDO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 5 (obsolete MONDO:0044256)","secondary_identifiers":["OMIM:227240"],"synonyms":[{"name":"SHEP5","type":"related"},{"name":"skin/hair/eye pigmentation 5, Black/nonblack hair","type":"related"},{"name":"skin/hair/eye pigmentation 5, black/nonblack hair","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/light eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 5","type":"related"}],"termid":"MONDO:0044256","xrefs":{"Monarch":{"xref_id":"0044256"}}}


id: PBO:0042125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 198","termid":"PBO:0042125"}


id: GO:0035952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oligopeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17005992"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035952)","synonyms":[{"name":"negative regulation of oligopeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of oligopeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035952"}


id: PBO:0064586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTEF antisense RNA 1","termid":"PBO:0064586"}


id: PBO:0072678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rubicon like autophagy enhancer","termid":"PBO:0072678"}


id: MONDO:0014402
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86634],"is_not":false,"summary":null,"term":"MONDO:0014402"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"severe neurodegenerative syndrome with lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014700","MEDGEN:863137","Orphanet:363400","GARD:17552","OMIM:615924"],"synonyms":[{"name":"PELD","type":"related"},{"name":"encephalopathy, progressive, with or without lipodystrophy","type":"related"},{"name":"severe neurodegenerative syndrome due to BSCL2 deficiency","type":"exact"}],"termid":"MONDO:0014402","terms_by_termid":{"MONDO:0014402":null},"xrefs":{"Monarch":{"xref_id":"0014402"}}}


id: PBO:0117021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT86 antisense RNA 2","termid":"PBO:0117021"}


id: GO:0102546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-O-(alpha-D-mannosyl)-glycerate + H2O = (R)-glycerate + D-mannose.","definition_xrefs":["RHEA:58456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"mannosylglycerate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-14900","EC:3.2.1.170"],"termid":"GO:0102546"}


id: PBO:0084763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase; forms a complex with Mrs1p to mediate splicing of the bI3 intron of the COB gene; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084763"}


id: PBO:0073845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member B1","termid":"PBO:0073845"}


id: PBO:0040545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 3","termid":"PBO:0040545"}


id: GO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of teichuronic acid, a polymer containing chains of uronic acids and N-acetylglucosamine found in the cell wall, membrane or capsule of Gram-positive bacteria.","definition_xrefs":["ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"is_a","term_name":"teichuronic acid metabolic process","termid":"GO:0050846"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"teichuronic acid biosynthetic process","synonyms":[{"name":"teichuronic acid anabolism","type":"exact"},{"name":"teichuronic acid biosynthesis","type":"exact"},{"name":"teichuronic acid formation","type":"exact"},{"name":"teichuronic acid synthesis","type":"exact"}],"termid":"GO:0050845"}


id: PATO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mottled","termid":"PATO:0002274"}


id: GO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the acrosomal vesicle and is located toward the sperm nucleus. This region is responsible for molecular interactions allowing the sperm to penetrate the zona pellucida and fuses with the egg plasma membrane.","definition_xrefs":["PMID:8936405","GOC:dph","PMID:3899643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"inner acrosomal membrane","termid":"GO:0002079"}


id: MONDO:1010883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in dogs due to a mutation in the HEXB gene. There is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. Characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:001462-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, dog","termid":"MONDO:1010840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXB-related dog","synonyms":[{"name":"gangliosidosis, GM2, type II (Sandhoff or variant 0), dog","type":"related"}],"termid":"MONDO:1010883","xrefs":{"Monarch":{"xref_id":"1010883"}}}


id: MONDO:0005275
data:
  {"annotated_genes":["SJAG_00229","SJAG_02194","SJAG_03689","SJAG_03855","SJAG_00169","SJAG_04114","SJAG_02805","SJAG_02206","SJAG_01159","SJAG_00566","SJAG_01836","SJAG_03626","SJAG_03453","SJAG_03125","SJAG_00570","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"},{"annotations":[85421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[87159,87690,87158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[86916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[86685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[85646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[87479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"},{"annotations":[87402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"},{"annotations":[86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"A disease involving the lung.","direct_ancestors":[{"relation_name":"is_a","term_name":"lower respiratory tract disorder","termid":"MONDO:0000270"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00229":null,"SJAG_00566":null,"SJAG_00570":null,"SJAG_01159":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02206":null,"SJAG_02805":null,"SJAG_03125":null,"SJAG_03453":null,"SJAG_03626":null,"SJAG_03689":null,"SJAG_03855":null,"SJAG_04114":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"lung disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:850","MESH:D008171","EFO:0003818","ICD9:518.89","NCIT:C3198","SCTID:19829001","MEDGEN:7399","UMLS:C0024115"],"synonyms":[{"name":"disease of lung","type":"exact"},{"name":"disease or disorder of lung","type":"exact"},{"name":"disorder of lung","type":"exact"},{"name":"lung disease","type":"exact"},{"name":"lung disease or disorder","type":"exact"},{"name":"lung disorder","type":"exact"},{"name":"lung disorders","type":"exact"},{"name":"pulmonary disease","type":"exact"},{"name":"pulmonary diseases","type":"exact"},{"name":"pulmonary disorder","type":"exact"},{"name":"pulmonary disorders","type":"exact"}],"termid":"MONDO:0005275","terms_by_termid":{"MONDO:0008903":null,"MONDO:0009329":null,"MONDO:0010926":null,"MONDO:0011014":null,"MONDO:0011871":null,"MONDO:0013878":null,"MONDO:0014206":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0100215":null,"MONDO:0100220":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0005275"}}}


id: MONDO:0013410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 6","secondary_identifiers":["DOID:0111769","GARD:15703","OMIM:613762","UMLS:C3151064","MEDGEN:462414"],"synonyms":[{"name":"46,XY SEX reversal 6","type":"related"},{"name":"46,XY Sex reversal type 6","type":"exact"},{"name":"46,XY Sex reversal, partial or complete, Map3K1-related","type":"related"},{"name":"46,XY gonadal dysgenesis, partial or complete, Map3K1-related","type":"related"},{"name":"46,XY sex reversal 6","type":"exact"},{"name":"46XY sex reversal 6","type":"exact"},{"name":"SRXY6","type":"related"}],"termid":"MONDO:0013410","xrefs":{"Monarch":{"xref_id":"0013410"}}}


id: MONDO:0020171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palpebral tumor (obsolete MONDO:0020171)","termid":"MONDO:0020171","xrefs":{"Monarch":{"xref_id":"0020171"}}}


id: MONDO:1011964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital chondrodystrophy, non-human animal","secondary_identifiers":["OMIA:001814"],"synonyms":[{"name":"congenital chondrodystrophy of unknown origin, non-human animal","type":"exact"}],"termid":"MONDO:1011964","xrefs":{"Monarch":{"xref_id":"1011964"}}}


id: FYPO:0003824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of caffeine and rapamycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to caffeine and rapamycin","synonyms":[{"name":"resistance to caffeine and rapamycin during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine and rapamycin during vegetative growth","type":"exact"},{"name":"resistance to caffeine and rapamycin in combination","type":"exact"},{"name":"resistant to caffeine and rapamycin","type":"exact"}],"termid":"FYPO:0003824"}


id: PBO:0087500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GID complex; involved in proteasome-dependent catabolite inactivation of gluconeogenic enzymes FBPase, PEPCK, and c-MDH; forms dimer with Rmd5p that is then recruited to GID Complex by Gid8p; contains a degenerate RING finger motif needed for GID complex ubiquitin ligase activity in vivo, as well as CTLH and CRA domains; plays role in anti-apoptosis; required for survival upon exposure to K1 killer toxin","termid":"PBO:0087500"}


id: PBO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3D","termid":"PBO:0039723"}


id: GO:0003136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling that decreases the rate, frequency or extent of heart induction.","definition_xrefs":["GOC:mtg_heart","PMID:19862329"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of heart induction by canonical Wnt signaling pathway (obsolete GO:0003136)","synonyms":[{"name":"negative regulation of cardioblast cell fate specification by Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of heart induction by canonical Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of heart induction by canonical Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of heart induction by canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0003136"}


id: MONDO:0012830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"10q22.3q23.3 microdeletion syndrome is a rare partial autosomal monosomy characterized by a mild facial dysmorphism variably including macrocephaly, broad forehead, hypertelorism or hypotelorism, deep-set eyes, upslanting or downslanting palpebral fissures, low-set ears, flat nasal bridge, smooth philtrum, thin upper lip), cleft palate, cerebellar and cardiac malformations, psychomotor development delay, and behavioral abnormalities (attention deficit hyperactivity disorder, autism). Other rare features may include congenital breast aplasia, arachnodactyly, joint hyperlaxity, club feet, feeding difficulties, failure to thrive.","definition_xrefs":["Orphanet:276413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 10","termid":"MONDO:0016909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10q23 deletion syndrome","secondary_identifiers":["OMIM:612242","GARD:17280","MEDGEN:906099","MESH:C567385","DOID:0060389","UMLS:C4225669"],"synonyms":[{"name":"10q22.3q23 microdeletion syndrome","type":"related"},{"name":"10q22.3q23.3 microdeletion syndrome","type":"related"},{"name":"Del(10)(q22.3q23.3)","type":"exact"},{"name":"chromosome 10Q22.3-q23.2 deletion syndrome","type":"related"},{"name":"chromosome 10q22.3-q23.2 deletion syndrome","type":"related"},{"name":"chromosome 10q23 deletion syndrome","type":"exact"},{"name":"deletion 10q22.3q23.3","type":"exact"},{"name":"juvenile polyposis of infancy","type":"related"},{"name":"juvenile polyposis, infantile","type":"related"},{"name":"monosomy 10q22.3q23.3","type":"exact"}],"termid":"MONDO:0012830","xrefs":{"Monarch":{"xref_id":"0012830"}}}


id: GO:2001072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to galactomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteropolysaccharide binding","termid":"GO:0010297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galactomannan binding","termid":"GO:2001072"}


id: MOD:01287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15602776","Unimod:364#K","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","termid":"MOD:00789"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:01287"}


id: PR:O94325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 1 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10130:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.07","secondary_identifiers":["UniProtKB:O94325"],"synonyms":[{"name":"PTS1 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PTS1R (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC725.07","type":"related"},{"name":"Spom972h-PEX5","type":"exact"},{"name":"peroxin-5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94325"}


id: PBO:0026664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026664"}


id: RO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","termid":"RO:0002336"}


id: MONDO:0008722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short-chain acyl-CoA dehydrogenase (SCAD) deficiency is a very rare inborn error of mitochondrial fatty acid oxidation characterized by variable manifestations ranging from asymptomatic individuals (in most cases) to those with failure to thrive, hypotonia, seizures, developmental delay and progressive myopathy.","definition_xrefs":["Orphanet:26792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase deficiency","termid":"MONDO:0017714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"short chain acyl-CoA dehydrogenase deficiency","secondary_identifiers":["GARD:4822","NCIT:C84539","UMLS:C0342783","DOID:0080154","MEDGEN:90998","NORD:1709","ICD10CM:E71.312","NANDO:2200514","MESH:C537596","OMIM:201470","icd11.foundation:180018315"],"synonyms":[{"name":"ACADS deficiency","type":"exact"},{"name":"ACADSD","type":"related"},{"name":"Acads deficiency","type":"related"},{"name":"SCAD","type":"exact"},{"name":"SCAD deficiency","type":"exact"},{"name":"SCADD","type":"exact"},{"name":"Scad deficiency","type":"related"},{"name":"Scadh deficiency","type":"related"},{"name":"Short Chain Acyl CoA Dehydrogenase Deficiency","type":"exact"},{"name":"acyl-CoA dehydrogenase, short-chain deficiency","type":"exact"},{"name":"acyl-CoA dehydrogenase, short-chain, deficiency OF","type":"related"},{"name":"lipid-storage myopathy secondary to short-chain acyl-Coa dehydrogenase deficiency","type":"related"},{"name":"short chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"short-chain acyl-CoA dehydrogenase deficiency","type":"related"},{"name":"short-chain acyl-CoA dehydrogenase deficiency (SCAD)","type":"exact"},{"name":"short-chain acyl-Coenzyme A dehydrogenase deficiency (SCAD)","type":"exact"},{"name":"short-chain acyl-coenzyme A dehydrogenase deficiency","type":"related"}],"termid":"MONDO:0008722","xrefs":{"Monarch":{"xref_id":"0008722"}}}


id: PBO:0029265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029265"}


id: SO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a Y-RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_primary_transcript","synonyms":[{"name":"Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002042"}


id: FYPO:0002558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to medial cortex during vegetative growth","synonyms":[{"name":"normal protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002558"}


id: FYPO:0003221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"},{"relation_name":"is_a","term_name":"normal protein acetylation during vegetative growth","termid":"FYPO:0003362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone acetylation during vegetative growth","synonyms":[{"name":"normal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003221"}


id: PBO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 pseudogene 2","termid":"PBO:0047280"}


id: GO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to increase the frequency, rate or extent of transcription from an RNA polymerase II promoter. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional activator activity, RNA polymerase II transcription factor binding (obsolete GO:0001190)","synonyms":[{"name":"RNA polymerase II transcription factor binding transcription activator activity","type":"exact"},{"name":"RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription","type":"exact"}],"termid":"GO:0001190"}


id: PBO:0074044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 26","termid":"PBO:0074044"}


id: PBO:0085835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0085835"}


id: MONDO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the long arm of chromosome 13.","definition_xrefs":["NCIT:C36497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 13","secondary_identifiers":["GARD:20832","MEDGEN:120541","UMLS:C0265451","MESH:C535449","Orphanet:262101"],"synonyms":[{"name":"13q deletion","type":"related"},{"name":"13q monosomy","type":"related"},{"name":"chromosome 13q deletion","type":"related"},{"name":"del(13q)","type":"related"},{"name":"deletion 13q","type":"related"},{"name":"loss of chromosome 13q","type":"related"},{"name":"monosomy 13q","type":"related"},{"name":"partial deletion of chromosome 13q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 13","type":"exact"},{"name":"partial monosomy of chromosome 13q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 13","type":"exact"}],"termid":"MONDO:0016911","xrefs":{"Monarch":{"xref_id":"0016911"}}}


id: PBO:0055243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2670","termid":"PBO:0055243"}


id: PBO:0074881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 60","termid":"PBO:0074881"}


id: PBO:0082526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell fusion regulator; cytoplasmic protein localized to shmoo tip; required for alignment of parental nuclei before nuclear fusion during mating; contains a Dbl-homology domain; binds specifically with activated Cdc42p","termid":"PBO:0082526"}


id: GO:1901480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oleate from one side of a membrane to the other.","definition_xrefs":["PMID:19493158","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"oleate transmembrane transporter activity","synonyms":[{"name":"oleate transporter activity","type":"related"}],"termid":"GO:1901480"}


id: PBO:0044508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 4","termid":"PBO:0044508"}


id: PR:O59682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine palmitoyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03120","PRO:DNx","PANTHER:PTHR13693:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.02c","secondary_identifiers":["UniProtKB:O59682"],"synonyms":[{"name":"SPT 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPT1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPTLC1","type":"exact"},{"name":"long chain base biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59682"}


id: MONDO:0019380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute arboviral infection caused by an alphavirus of the Togaviridae family transmitted by an infected mosquito, that more frequently affects children and that is characterized by the presence of mild flulike symptoms (fever, chills, headache, nausea, vomiting, and anorexia) but that can progress to weakness, altered mental status, photophobia, mental confusion, seizures, somnolence, coma and/or even death. The disease can leave neurological sequelae, mainly in infants and children, such as seizures, spasticity or behavioral disorders.","definition_xrefs":["Orphanet:83593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"},{"relation_name":"is_a","term_name":"mosquito-borne viral encephalitis","termid":"MONDO:0020601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"western equine encephalitis","secondary_identifiers":["ICD9:062.1","ICD10CM:A83.1","EFO:0007546","MedDRA:10014614","DOID:10843","icd11.foundation:1543765035","MEDGEN:57778","MESH:D020241","NCIT:C85227","GARD:7888","SCTID:47523006","UMLS:C0153064"],"synonyms":[{"name":"WEE","type":"related"},{"name":"Western equine encephalitis virus caused infectious encephalitis","type":"exact"},{"name":"Western equine encephalitis virus infectious encephalitis","type":"exact"},{"name":"Western equine encephalomyelitis","type":"exact"}],"termid":"MONDO:0019380","xrefs":{"Monarch":{"xref_id":"0019380"}}}


id: PBO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 3","termid":"PBO:0045257"}


id: SO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that reverts the sequence of a previous frameshift mutation back to the initial frame.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frame_restoring_variant","synonyms":[{"name":"frame restoring variant","type":"exact"}],"termid":"SO:0001591"}


id: FYPO:0002083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and in which the nucleus is larger than normal. The cell contains one nucleus and no septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PMID:10388806","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"swollen elongated cell with enlarged nucleus","termid":"FYPO:0005440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000004","FYPO:0000032","FYPO:0000005","FYPO:0002403"],"is_obsolete":false,"name":"inviable swollen elongated cell with enlarged nucleus","synonyms":[{"name":"inviable elongated cell with enlarged nucleus and increased cell volume","type":"exact"},{"name":"inviable elongated vegetative cell with swollen medial region","type":"related"},{"name":"inviable enlarged elongated cell with enlarged nucleus","type":"related"},{"name":"inviable large elongated cell with enlarged nucleus","type":"related"},{"name":"inviable swollen elongated mononucleate aseptate cell with enlarged nucleus","type":"exact"},{"name":"inviable swollen elongated vegetative cell with enlarged nucleus","type":"exact"},{"name":"lethal; swollen elongated cell with enlarged nucleus","type":"exact"}],"termid":"FYPO:0002083"}


id: PBO:0047338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 7","termid":"PBO:0047338"}


id: PATO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having a sudden onset, sharp rise, and short course.","definition_xrefs":["dictionary:reference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute","termid":"PATO:0000389"}


id: MONDO:1010076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypereosinophilic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypereosinophilic syndrome, non-human animal","secondary_identifiers":["OMIA:000502"],"termid":"MONDO:1010076","xrefs":{"Monarch":{"xref_id":"1010076"}}}


id: FYECO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which FITC-conjugated lectin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000163 FITC-conjugated lectin added (obsolete FYECO:0000163)","termid":"FYECO:0000163"}


id: MONDO:0850048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic pustular folliculitis","termid":"MONDO:0023076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"classic eosinophilic pustular folliculitis","secondary_identifiers":["Orphanet:617408","GARD:22452"],"termid":"MONDO:0850048","xrefs":{"Monarch":{"xref_id":"0850048"}}}


id: GO:0140268
data:
  {"annotated_genes":["SJAG_03170","SJAG_01168","SJAG_01329","SJAG_01564","SJAG_03247","SJAG_04413","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77304,91819,97785,104689,111970,117831,118976],"is_not":false,"summary":null,"term":"GO:0140268"}]},"cv_name":"cellular_component","definition":"A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes.","definition_xrefs":["PMID:23041194","PMID:27955928","PMID:29290560","PMID:29782498","PMID:30012696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01168":null,"SJAG_01329":null,"SJAG_01564":null,"SJAG_02613":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane contact site","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"EPCS","type":"exact"},{"name":"ER-PM contact site","type":"exact"},{"name":"ER-plasma membrane contact site","type":"exact"},{"name":"endoplasmic reticulum-plasma membrane contact junction","type":"exact"}],"termid":"GO:0140268","terms_by_termid":{"GO:0140268":null}}


id: PR:O13803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 82 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00825","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.06c","secondary_identifiers":["UniProtKB:O13803"],"synonyms":[{"name":"Spom972h-CCDC82","type":"exact"}],"termid":"PR:O13803"}


id: MONDO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inability to efficiently utilize and/or sustain binocular vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"strabismus","termid":"MONDO:0003432"},{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binocular vision disease","secondary_identifiers":["SCTID:83275001","DOID:12667","UMLS:C0005461","ICD9:368.30","NCIT:C34422","EFO:0009535","MEDGEN:571"],"synonyms":[{"name":"binocular vision disorder","type":"exact"},{"name":"simultaneous visual perception without fusion","type":"narrow"}],"termid":"MONDO:0001564","xrefs":{"Monarch":{"xref_id":"0001564"}}}


id: GO:0018355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine.","definition_xrefs":["RESID:AA0167"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine (obsolete GO:0018355)","termid":"GO:0018355"}


id: PBO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM47E-STBD1 readthrough","termid":"PBO:0046932"}


id: MOD:01089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthyl","synonyms":[{"name":"Xan","type":"exact"}],"termid":"MOD:01089"}


id: PBO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrin","termid":"PBO:0044685"}


id: PBO:0055779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 1","termid":"PBO:0055779"}


id: MONDO:0017678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease in which punctate palmoplantar keratoderma is a major feature..","gene_count":0,"genotype_count":0,"name":"obsolete obsolete disease with punctate palmoplantar keratoderma as a major feature (obsolete MONDO:0017678)","secondary_identifiers":["Orphanet:308023"],"synonyms":[{"name":"disease with punctate palmoplantar hyperkeratosis as a major feature","type":"exact"}],"termid":"MONDO:0017678","xrefs":{"Monarch":{"xref_id":"0017678"}}}


id: PBO:0016117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssa2","termid":"PBO:0016117"}


id: PBO:0081572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF497 antisense RNA 1","termid":"PBO:0081572"}


id: PBO:0070403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP9 pre-mRNA splicing factor","termid":"PBO:0070403"}


id: GO:0039680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using actin filaments.","definition_xrefs":["UniProtKB-KW:KW-1178","VZ:991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-dependent intracellular transport of virus","termid":"GO:0075520"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-dependent intracellular transport of virus towards nucleus","synonyms":[{"name":"actin-dependent intracellular transport of viral material towards nucleus","type":"exact"},{"name":"actin-dependent inwards viral transport","type":"exact"}],"termid":"GO:0039680"}


id: MONDO:0012481
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85428,85429],"is_not":false,"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","definition":"Mevalonic aciduria (MVA) is a rare, very severe form of mevalonate kinase deficiency (MKD) characterized by dysmorphic features, failure to thrive, psychomotor delay, ocular involvement, hypotonia, progressive ataxia, myopathy, and recurrent inflammatory episodes.","definition_xrefs":["Orphanet:29"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisomal disease","termid":"MONDO:0019053"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"mevalonate kinase deficiency","termid":"MONDO:0017708"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005328"],"is_obsolete":false,"name":"mevalonic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:572875152","NCIT:C84890","SCTID:718558008","MEDGEN:368373","NANDO:1200866","DOID:0050452","MedDRA:10072219","OMIM:610377","UMLS:C1959626","GARD:3588"],"synonyms":[{"name":"HIDS","type":"exact"},{"name":"MEVA","type":"related"},{"name":"MKD","type":"exact"},{"name":"MVA","type":"exact"},{"name":"Mevalonicaciduria","type":"related"},{"name":"complete mevalonate kinase deficiency","type":"exact"},{"name":"hyperimmunoglobulin D with periodic fever syndrome","type":"exact"},{"name":"mevalonic aciduria","type":"exact"}],"termid":"MONDO:0012481","terms_by_termid":{"MONDO:0012481":null},"xrefs":{"Monarch":{"xref_id":"0012481"}}}


id: GO:0010031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organismal movement by which the tip of a plant organ follows a spiral pattern as a consequence of growth.","definition_xrefs":["GOC:mtg_MIT_16mar07","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal movement","termid":"GO:0050879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumnutation","termid":"GO:0010031"}


id: GO:0034594
data:
  {"annotated_genes":["SJAG_03131","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[108619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol trisphosphate + H2O = phosphatidylinositol bisphosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol trisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034594","terms_by_termid":{"GO:0016314":null,"GO:0034485":null}}


id: MONDO:0013964
data:
  {"annotated_genes":["SJAG_00921"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87536],"is_not":false,"summary":null,"term":"MONDO:0013964"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPL26 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614900","MEDGEN:766956","GARD:15879","NCIT:C176920","UMLS:C3554042","DOID:0111892"],"synonyms":[{"name":"DBA11","type":"related"},{"name":"Diamond-Blackfan Anaemia type 11","type":"exact"},{"name":"Diamond-Blackfan Anemia type 11","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPL26","type":"exact"},{"name":"Diamond-Blackfan anemia 11","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPL26","type":"exact"},{"name":"RPL26 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPL26 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0013964","terms_by_termid":{"MONDO:0013964":null},"xrefs":{"Monarch":{"xref_id":"0013964"}}}


id: MONDO:0013550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal myopathy with posterior leg and anterior hand involvement, also named distal ABD-filaminopathy, is a neuromuscular disease characterized by a progressive symmetric muscle weakness of anterior upper and posterior lower limbs.","definition_xrefs":["Orphanet:63273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"distal myopathy with posterior leg and anterior hand involvement","secondary_identifiers":["DOID:0111190","GARD:16666","MEDGEN:481352","SCTID:733489002","OMIM:614065","UMLS:C3279722"],"synonyms":[{"name":"MPD4","type":"related"},{"name":"Williams distal myopathy","type":"related"},{"name":"distal ABD-filaminopathy","type":"exact"},{"name":"myopathy, distal, 4","type":"related"},{"name":"myopathy, distal, type 4","type":"exact"}],"termid":"MONDO:0013550","xrefs":{"Monarch":{"xref_id":"0013550"}}}


id: MONDO:0007549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized dominant dystrophic epidermolysis bullosa (DDEB-gen) is a subtype of dystrophic epidermolysis bullosa (DEB), formerly known as DDEB, Pasini and Cockayne-Touraine types, characterized by generalized blistering, milia formation, atrophic scarring, and dystrophic nails.","definition_xrefs":["Orphanet:231568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"generalized dominant dystrophic epidermolysis bullosa","secondary_identifiers":["ICD9:757.39","GARD:2139","MEDGEN:140935","DOID:0080224","OMIM:131750","SCTID:75875004","UMLS:C0432322"],"synonyms":[{"name":"Albopapuloid dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"DDEB","type":"related"},{"name":"DDEB, Pasini and Cockayne-Touraine types","type":"exact"},{"name":"DDEB, generalised","type":"exact"},{"name":"DDEB, generalized","type":"exact"},{"name":"DDEB-gen","type":"exact"},{"name":"autosomal dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"autosomal dominant dystrophic epidermolysis bullosa, Pasini and Cockayne-Touraine types","type":"exact"},{"name":"dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"dominant dystrophic epidermolysis bullosa, generalised","type":"related"},{"name":"dominant dystrophic epidermolysis bullosa, generalized","type":"related"},{"name":"dystrophic epidermolysis bullosa, autosomal dominant","type":"related"},{"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","type":"related"},{"name":"epidermolysis bullosa dystrophica, AD","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Cockayne-Touraine type","type":"related"},{"name":"epidermolysis bullosa dystrophica, Cockayne-Touraine type (formerly)","type":"related"},{"name":"epidermolysis bullosa dystrophica, Pasini type","type":"related"},{"name":"epidermolysis bullosa dystrophica, Pasini type (formerly)","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal dominant","type":"related"}],"termid":"MONDO:0007549","xrefs":{"Monarch":{"xref_id":"0007549"}}}


id: PBO:0069602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 879, pseudogene","termid":"PBO:0069602"}


id: MONDO:0020659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete upper tract urothelial carcinoma (obsolete MONDO:0020659)","secondary_identifiers":["GARD:9376"],"termid":"MONDO:0020659","xrefs":{"Monarch":{"xref_id":"0020659"}}}


id: PBO:0091100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8","termid":"PBO:0091100"}


id: MONDO:0012913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sub-phenotype of WAGR that includes obesity, and is associated with mutation(s) in the BDNF gene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"WAGR syndrome","termid":"MONDO:0008681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, aniridia, genitourinary anomalies, intellectual disability, and obesity syndrome","secondary_identifiers":["GARD:15559","MESH:C567292","MEDGEN:382718","NCIT:C122804","UMLS:C2675904","OMIM:612469"],"synonyms":[{"name":"WAGR syndrome with obesity","type":"related"},{"name":"WAGRO","type":"related"},{"name":"Wagro syndrome","type":"related"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, intellectual disability, and obesity syndrome","type":"exact"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, mental retardation, and obesity syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-intellectual disability-obesity syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-mental retardation-obesity syndrome","type":"exact"},{"name":"chromosome 11P13-p12 deletion syndrome","type":"related"}],"termid":"MONDO:0012913","xrefs":{"Monarch":{"xref_id":"0012913"}}}


id: GO:0018887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-carboxy-4'-sulfoazobenzene, a sulfonated azo compound synthesized by nitro-amine condensation from sulfanilic acid and 4-nitrobenzoic acid.","definition_xrefs":["PMID:9603860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"4-carboxy-4'-sulfoazobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:csab"],"synonyms":[{"name":"4-carboxy-4'-sulfoazobenzene metabolism","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolic process","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolism","type":"exact"}],"termid":"GO:0018887"}


id: GO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a Purkinje myocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in Purkinje myocyte action potential repolarization","termid":"GO:0086088"}


id: PBO:0110466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a master non-coding RNA antagonizing inflammation","termid":"PBO:0110466"}


id: GO:0170063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a solute from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:26631267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}


id: PBO:0027236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cenH-derived_RNA_level","termid":"PBO:0027236"}


id: GO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl","PMID:18305167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression of viral release by host","secondary_identifiers":["GO:1902187"],"synonyms":[{"name":"down regulation of release of virus from host","type":"exact"},{"name":"down regulation of viral exit","type":"exact"},{"name":"down regulation of viral release","type":"exact"},{"name":"down regulation of viral release from host cell","type":"exact"},{"name":"down regulation of viral shedding","type":"exact"},{"name":"down-regulation of release of virus from host","type":"exact"},{"name":"down-regulation of viral exit","type":"exact"},{"name":"down-regulation of viral release","type":"exact"},{"name":"down-regulation of viral release from host cell","type":"exact"},{"name":"down-regulation of viral shedding","type":"exact"},{"name":"downregulation of release of virus from host","type":"exact"},{"name":"downregulation of viral exit","type":"exact"},{"name":"downregulation of viral release","type":"exact"},{"name":"downregulation of viral release from host cell","type":"exact"},{"name":"downregulation of viral shedding","type":"exact"},{"name":"inhibition of release of virus from host","type":"exact"},{"name":"inhibition of viral exit","type":"exact"},{"name":"inhibition of viral release","type":"exact"},{"name":"inhibition of viral release from host cell","type":"narrow"},{"name":"inhibition of viral shedding","type":"exact"},{"name":"negative regulation by host of viral release from host cell","type":"exact"},{"name":"negative regulation of release of virus from host","type":"exact"},{"name":"negative regulation of viral exit","type":"exact"},{"name":"negative regulation of viral release","type":"exact"},{"name":"negative regulation of viral release from host cell","type":"exact"},{"name":"negative regulation of viral shedding","type":"exact"}],"termid":"GO:0044790"}


id: GO:1903547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth hormone activity.","definition_xrefs":["GOC:TermGenie","PMID:3068266","GOC:mr","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of growth hormone activity","synonyms":[{"name":"regulation of GH activity","type":"exact"},{"name":"regulation of pituitary growth hormone activity","type":"narrow"},{"name":"regulation of placental growth hormone activity","type":"narrow"}],"termid":"GO:1903547"}


id: MONDO:0700275
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87667,87666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"An instance of prostate cancer that is caused by an inherited genomic modification in an individual. Familial prostate cancer (FPC) is a malignant tumor of the prostate with an early onset. FPC is either asymptomatic or causes mictionary symptoms, erectile dysfunction, bone pain, venous compression and infectious or inflammatory syndrome (for the metastatic forms). It is also characterized by familial antecedents.","definition_xrefs":["Orphanet:1331","MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"prostate cancer","termid":"MONDO:0008315"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:419810","MESH:C537243","OMIM:176807","UMLS:C2931456","SCTID:715412008"],"termid":"MONDO:0700275","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0700275"}}}


id: PBO:0082591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-Golgi t-SNARE syntaxin; required for vesicular transport between the ER and the Golgi complex; binds at least 9 SNARE proteins; plays a role in autophagy by regulating formation of autophagic vesicles in Golgi","termid":"PBO:0082591"}


id: PBO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member I, pseudogene","termid":"PBO:0047992"}


id: PBO:0043787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase E","termid":"PBO:0043787"}


id: PBO:0040758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed associated with NEDD4 1","termid":"PBO:0040758"}


id: GO:0047058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methyl-3-phytyl-2,3-dihydronaphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol.","definition_xrefs":["RHEA:21560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vitamin-K-epoxide reductase (warfarin-insensitive) activity","secondary_identifiers":["MetaCyc:1.1.4.2-RXN","EC:1.17.4.5"],"synonyms":[{"name":"vitamin K 2,3-epoxide reductase activity","type":"related"}],"termid":"GO:0047058"}


id: GO:0098795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A posttranscriptional gene silencing pathway that involves the cleavage of mRNAs in a non-gene-specific manner.","definition_xrefs":["PMID:15009896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"global gene silencing by mRNA cleavage","secondary_identifiers":["GO:0030423"],"synonyms":[{"name":"RNA interference, targeting of mRNA for destruction","type":"related"},{"name":"gene silencing by mRNA cleavage","type":"broad"},{"name":"mRNA cleavage involved in gene silencing","type":"broad"},{"name":"mRNA destabilization-mediated gene silencing","type":"related"},{"name":"targeting of mRNA for destruction involved in RNA interference","type":"related"}],"termid":"GO:0098795"}


id: PBO:0090392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ubiquitin-protein ligase E3 subunit 4","termid":"PBO:0090392"}


id: PBO:0056890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MID1 interacting protein 1","termid":"PBO:0056890"}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: PBO:0064916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 5","termid":"PBO:0064916"}


id: PR:O94478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug137 gene.","definition_xrefs":["UniProtKB:O94478","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 137 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.11","synonyms":[{"name":"Spom972h-mug137","type":"exact"}],"termid":"PR:O94478"}


id: GO:0022018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}


id: MONDO:0008733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial glucocorticoid deficiency (FGD) is a group of primary adrenal insufficiencies characterized clinically by neonatal hyperpigmentation, hypoglycemia, failure to thrive, and recurrent infections, and biochemically by glucocorticoid deficiency without mineralocorticoid deficiency.","definition_xrefs":["Orphanet:361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial glucocorticoid deficiency","secondary_identifiers":["UMLS:C4054695","icd11.foundation:861297039","MEDGEN:885955","OMIMPS:202200","DOID:0080620","SCTID:765326001","GARD:2498","NCIT:C120446","MESH:C565974"],"synonyms":[{"name":"GCCD","type":"related"},{"name":"glucocorticoid deficiency","type":"broad"}],"termid":"MONDO:0008733","xrefs":{"Monarch":{"xref_id":"0008733"}}}


id: GO:1903968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16928959","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to micafungin","termid":"GO:1903967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to micafungin","termid":"GO:1903968"}


id: GO:0140048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of manganese ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:25319704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transport","termid":"GO:0071421"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"manganese ion export across plasma membrane","synonyms":[{"name":"manganese ion export from cell","type":"exact"}],"termid":"GO:0140048"}


id: PBO:0003983
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shk1 Kinase Binding protein","termid":"PBO:0003983"}


id: GO:0003090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine released from the nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine-norepinephrine","termid":"GO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal epinephrine-norepinephrine","synonyms":[{"name":"increased force of heart contraction by epinephrine-norepinephrine released from the nerve endings","type":"exact"},{"name":"increased force of heart contraction by neuronal adrenaline-noradrenaline","type":"exact"},{"name":"increased force of heart contraction by neuronal epinephrine-norepinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline-noradrenaline","type":"related"},{"name":"positive regulation of heart contraction by epinephrine-norepinephrine","type":"related"}],"termid":"GO:0003090"}


id: MONDO:1011356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sensory ganglionopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ganglionopathy, non-human animal","termid":"MONDO:1011356","xrefs":{"Monarch":{"xref_id":"1011356"}}}


id: PBO:0079279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTK protein kinase","termid":"PBO:0079279"}


id: MONDO:1010579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, rabbit","secondary_identifiers":["OMIA:000279-9986"],"termid":"MONDO:1010579","xrefs":{"Monarch":{"xref_id":"1010579"}}}


id: PBO:0062173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 16 pseudogene","termid":"PBO:0062173"}


id: PBO:0041634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 4","termid":"PBO:0041634"}


id: MOD:00075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N,N-dimethyl-L-proline.","definition_xrefs":["RESID:AA0066","PubMed:14570711","ChEBI:21451","PubMed:12964758","PubMed:3882426","Unimod:529","PubMed:193025","PubMed:6254758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protonated-dimethylated residue","termid":"MOD:00710"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-proline","synonyms":[{"name":"(2S)-2-carboxy-1,1-dimethylpyrrolidinium","type":"exact"},{"name":"1,1-dimethyl-L-prolinium","type":"exact"},{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethyl","type":"related"},{"name":"Dimethylation of proline residue","type":"related"},{"name":"MOD_RES N,N-dimethylproline","type":"exact"},{"name":"N,N-dimethyl-L-proline","type":"exact"},{"name":"N,N-dimethyl-L-prolinium","type":"exact"},{"name":"N,N-dimethylated L-proline","type":"exact"},{"name":"NMe2Pro","type":"exact"},{"name":"stachydrin","type":"exact"}],"termid":"MOD:00075"}


id: GO:1900109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 dimethylation (obsolete GO:1900109)","synonyms":[{"name":"regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900109"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: PBO:0036265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase","termid":"PBO:0036265"}


id: PBO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_myo-inositol_import","termid":"PBO:0031152"}


id: FYPO:0003189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein import into the nucleus is decreased. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclear import","termid":"FYPO:0000515"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein import into nucleus during vegetative growth","termid":"FYPO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein import into nucleus","synonyms":[{"name":"decreased protein import into nucleus during mitotic cell cycle","type":"related"},{"name":"decreased protein import into nucleus during vegetative growth","type":"exact"},{"name":"reduced protein import into nucleus","type":"exact"}],"termid":"FYPO:0003189"}


id: GO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:16429326","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"5-diphosphoinositol pentakisphosphate 6-kinase activity","synonyms":[{"name":"inositol heptakisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000834"}


id: GO:1901876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion binding.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:16432188","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion binding","synonyms":[{"name":"regulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901876"}


id: PATO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the absence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F minus mating type","synonyms":[{"name":"F-","type":"exact"}],"termid":"PATO:0001348"}


id: PBO:0062232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 12","termid":"PBO:0062232"}


id: MONDO:0006103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sporadic or familial pheochromocytoma that is confined to the adrenal gland and does not have any metastatic potential. The majority of cases are sporadic, and usually unilateral. Familial cases are usually bilateral.","definition_xrefs":["NCIT:C48305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland pheochromocytoma","termid":"MONDO:0004974"},{"relation_name":"is_a","term_name":"benign neoplasm of adrenal medulla","termid":"MONDO:0021468"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign adrenal gland pheochromocytoma","secondary_identifiers":["EFO:1000106","MEDGEN:317403","UMLS:C1706920"],"synonyms":[{"name":"adrenal gland pheochromocytoma, benign","type":"exact"},{"name":"benign adrenal gland pheochromocytoma","type":"exact"},{"name":"pheochromocytoma, benign","type":"exact"}],"termid":"MONDO:0006103","xrefs":{"Monarch":{"xref_id":"0006103"}}}


id: PBO:0083251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by homology to a hemiascomycetous yeast protein","termid":"PBO:0083251"}


id: GO:0046620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of organ growth","termid":"GO:0046620"}


id: GO:0006816
data:
  {"annotated_genes":["SJAG_04096","SJAG_02877","SJAG_02019","SJAG_04551","SJAG_01400","SJAG_01090","SJAG_00296","SJAG_04757","SJAG_04471","SJAG_04668","SJAG_03399","SJAG_03850","SJAG_02440","SJAG_02532","SJAG_03631","SJAG_02322","SJAG_04698","SJAG_04028","SJAG_05229","SJAG_03873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95963,97680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[74818,67332,92738,114740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[95786,109682,95153,73927,66128,69949,72697,78711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[91538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[91556,113670],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[102464],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"calcium ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"calcium transport","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium:calcium exchange","type":"narrow"}],"termid":"GO:0006816","terms_by_termid":{"GO:0036444":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0090681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion protein","termid":"PBO:0090681"}


id: PBO:0043388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 2","termid":"PBO:0043388"}


id: MONDO:0100480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diminished production of adrenocortical hormones due to autoimmune destruction of the adrenal glands.","definition_xrefs":["NCIT:C113814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune primary adrenal insufficiency","secondary_identifiers":["GARD:5740","UMLS:C0271737","icd11.foundation:1920929898","MEDGEN:543526","Orphanet:85138"],"synonyms":[{"name":"autoimmune Addison's disease","type":"exact"},{"name":"autoimmune adrenalitis","type":"related"}],"termid":"MONDO:0100480","xrefs":{"Monarch":{"xref_id":"0100480"}}}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: GO:0045813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, calcium modulating pathway","termid":"GO:0008591"},{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway, calcium modulating pathway","termid":"GO:0007223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway, calcium modulating pathway","synonyms":[{"name":"activation of frizzled-2 signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signalling pathway","type":"exact"},{"name":"stimulation of frizzled-2 signaling pathway","type":"narrow"},{"name":"up regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"up-regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"upregulation of frizzled-2 signaling pathway","type":"exact"}],"termid":"GO:0045813"}


id: MONDO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, usually bacterial infectious process affecting the endometrium. It may extend to the myometrium and parametrial tissues. Symptoms include lower abdominal pain, vaginal discharge, and vaginal bleeding.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometritis","secondary_identifiers":["SCTID:78623009","NCIT:C26764","UMLS:C0014179","MEDGEN:41789","MESH:D004716","DOID:1002","EFO:1001312"],"synonyms":[{"name":"endometrium inflammation","type":"exact"},{"name":"inflammation of endometrium","type":"exact"},{"name":"uterine infection","type":"exact"}],"termid":"MONDO:0000918","xrefs":{"Monarch":{"xref_id":"0000918"}}}


id: GO:0030521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by an androgen binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"androgen receptor signaling pathway","synonyms":[{"name":"androgen receptor signalling pathway","type":"exact"},{"name":"nuclear-receptor-mediated androgen receptor signaling pathway","type":"exact"}],"termid":"GO:0030521"}


id: GO:0101024
data:
  {"annotated_genes":["SJAG_01050","SJAG_01242","SJAG_00416","SJAG_03073","SJAG_03783","SJAG_00900","SJAG_04489","SJAG_04464","SJAG_00680","SJAG_03891","SJAG_03449","SJAG_03892","SJAG_01745","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119413,119877,119923],"is_not":false,"summary":null,"term":"GO:0101024"},{"annotations":[101759,94176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140515"},{"annotations":[119694,96296,91682,106880,101211,119692,119695,119693,103463,98285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis.","definition_xrefs":["PMID:15147872","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03073":null,"SJAG_03449":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear membrane organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear membrane organization involved in mitotic nuclear division","type":"exact"}],"termid":"GO:0101024","terms_by_termid":{"GO:0007084":null,"GO:0101024":null,"GO:0140515":null}}


id: GO:0007217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by tachykinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process. Tachykinin is a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2).","definition_xrefs":["GOC:mah","PMID:14723970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"tachykinin receptor signaling pathway","synonyms":[{"name":"tachykinin signalling pathway","type":"exact"}],"termid":"GO:0007217"}


id: MONDO:1012057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"degenerative myopathy of deep pectoral muscle, non-human animal","termid":"MONDO:1011787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of deep pectoral muscle, turkey","secondary_identifiers":["OMIA:000264-9103"],"termid":"MONDO:1012057","xrefs":{"Monarch":{"xref_id":"1012057"}}}


id: GO:0035621
data:
  {"annotated_genes":["SJAG_01116","SJAG_03690","SJAG_04413","SJAG_00355","SJAG_01437","SJAG_00176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73251,73697,73911,74632,109930,117815],"is_not":false,"summary":null,"term":"GO:0035621"}]},"cv_name":"biological_process","definition":"The directed movement of a ceramide from the endoplasmic reticulum (ER) to the Golgi. Ceramides are a class of lipid composed of sphingosine linked to a fatty acid.","definition_xrefs":["PMID:14685229","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"},{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00355":null,"SJAG_01116":null,"SJAG_01437":null,"SJAG_03690":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ER to Golgi ceramide transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER to Golgi ceramide translocation","type":"exact"},{"name":"endoplasmic reticulum to Golgi ceramide transport","type":"exact"},{"name":"non-vesicular ceramide trafficking","type":"exact"}],"termid":"GO:0035621","terms_by_termid":{"GO:0035621":null}}


id: PBO:0039468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 16","termid":"PBO:0039468"}


id: PBO:0048839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulysin","termid":"PBO:0048839"}


id: MONDO:0019956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process affecting the brain parenchyma. Causes include viral infections and less frequently bacterial infections, toxins, and immune-mediated processes.","definition_xrefs":["NCIT:C26760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis","secondary_identifiers":["MedDRA:10014581","ICD9:323.9","DOID:9588","ICD10CM:A85","UMLS:C0014038","ICD9:323.8","MEDGEN:4027","ICD9:323.0","Orphanet:97275","SCTID:45170000","MESH:D004660"],"synonyms":[{"name":"brain inflammation","type":"broad"}],"termid":"MONDO:0019956","xrefs":{"Monarch":{"xref_id":"0019956"}}}


id: GO:0032727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type I interferon production","termid":"GO:0032481"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"positively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interferon-alpha production","secondary_identifiers":["GO:0045356","GO:1902741"],"synonyms":[{"name":"activation of interferon-alpha production","type":"narrow"},{"name":"positive regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-alpha secretion","type":"narrow"},{"name":"stimulation of interferon-alpha production","type":"narrow"},{"name":"up regulation of interferon-alpha production","type":"exact"},{"name":"up-regulation of interferon-alpha production","type":"exact"},{"name":"upregulation of interferon-alpha production","type":"exact"}],"termid":"GO:0032727"}


id: PBO:0082174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor; GTPase of the Ras superfamily involved in regulation of coated formation vesicles in intracellular trafficking within the Golgi; ARF2 has a paralog, ARF1, that arose from the whole genome duplication; arf1 arf2 double null mutation is complemented by human ARF1, ARF4, ARF5, or ARF6","termid":"PBO:0082174"}


id: GO:0019520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"aldonic acid metabolic process","synonyms":[{"name":"aldonic acid metabolism","type":"exact"}],"termid":"GO:0019520"}


id: PBO:0054899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2313","termid":"PBO:0054899"}


id: PBO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo/keto reductase family protein","termid":"PBO:0003012"}


id: GO:0046174
data:
  {"annotated_genes":["SJAG_04192","SJAG_04048","SJAG_04320","SJAG_00244","SJAG_04870","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[72456,78990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[115348,89055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[73022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"polyol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol catabolic process","type":"exact"},{"name":"polyol breakdown","type":"exact"},{"name":"polyol catabolism","type":"exact"},{"name":"polyol degradation","type":"exact"}],"termid":"GO:0046174","terms_by_termid":{"GO:0006062":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: PBO:0060357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOCD antisense RNA 1","termid":"PBO:0060357"}


id: PBO:0082430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blocked reading frame otherwise encoding L-serine dehydratase","termid":"PBO:0082430"}


id: GO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-8939247"],"synonyms":[{"name":"regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"regulation of cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0001959"}


id: PBO:0060224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5 Y-linked (pseudogene)","termid":"PBO:0060224"}


id: MONDO:1012640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in dogs and is characterized by low plasma vWF concentrations and mild to moderate bleeding symptoms due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001057-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, dog","termid":"MONDO:1011612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease I, dog","synonyms":[{"name":"type 1 von Willebrand disease, dog","type":"related"},{"name":"vWDI","type":"exact"}],"termid":"MONDO:1012640","xrefs":{"Monarch":{"xref_id":"1012640"}}}


id: FYPO:0000973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to copper ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to copper ion","synonyms":[{"name":"normal cellular response to copper","type":"exact"},{"name":"normal cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000973"}


id: PBO:0028448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity","termid":"PBO:0028448"}


id: SO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences that decrease interactions between biological regions, such as between a promoter, its 5' context and/or the translational unit(s) it regulates. Spacers can affect regulation of translation, transcription, and other biological processes.","definition_xrefs":["PMID:24933158","PMID:20843779","PMID:27034378","PMID:28422998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inert_DNA_spacer","secondary_identifiers":["doi:10.1101/584664"],"synonyms":[{"name":"Inert DNA Spacer","type":"related"}],"termid":"SO:0002223"}


id: GO:0061951
data:
  {"annotated_genes":["SJAG_00144","SJAG_04565","SJAG_00330","SJAG_03029","SJAG_03915","SJAG_04609","SJAG_03838","SJAG_01114","SJAG_02282","SJAG_00916","SJAG_00858","SJAG_00379","SJAG_03970","SJAG_01516","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96049],"is_not":false,"summary":null,"term":"GO:0061951"},{"annotations":[91630,95230,113094,113311,119186,101452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[107363,95482,113313,70542,77967,109111,106733,109891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[88431],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a plasma membrane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_03029":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061951","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0099638":null}}


id: GO:0009042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + pyruvate = 3-methyl-2-oxobutanoate + L-alanine.","definition_xrefs":["EC:2.6.1.66","RHEA:22912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"valine-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:VALINE-PYRUVATE-AMINOTRANSFER-RXN","KEGG_REACTION:R01215"],"synonyms":[{"name":"L-valine:pyruvate aminotransferase activity","type":"related"},{"name":"alanine--valine transaminase activity","type":"related"},{"name":"alanine-oxoisovalerate aminotransferase activity","type":"related"},{"name":"transaminase C activity","type":"narrow"},{"name":"valine--pyruvate aminotransferase activity","type":"related"},{"name":"valine-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0009042"}


id: MONDO:1012589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in Japanese medaka due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, Japanese medaka","secondary_identifiers":["OMIA:000202-8090"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Oryzias latipes (Japanese medaka)","type":"exact"}],"termid":"MONDO:1012589","xrefs":{"Monarch":{"xref_id":"1012589"}}}


id: PBO:0026858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex_assembly","termid":"PBO:0026858"}


id: PBO:0017844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deaminase (predicted)","termid":"PBO:0017844"}


id: PBO:0041694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caldesmon 1","termid":"PBO:0041694"}


id: MONDO:0024649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that affects the optic tract. This condition can be seen in association with neurofibromatosis 1. It is most commonly seen in the pediatric age group.","definition_xrefs":["NCIT:C7533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"diencephalic astrocytomas","termid":"MONDO:0003169"},{"relation_name":"is_a","term_name":"optic pathway glioma","termid":"MONDO:0016167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"optic tract astrocytoma","secondary_identifiers":["MEDGEN:237052","UMLS:C1336971"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of optic tract","type":"exact"},{"name":"optic tract astrocytoma","type":"exact"},{"name":"optic tract astrocytoma (excluding glioblastoma)","type":"exact"},{"name":"visual pathway astrocytoma","type":"exact"}],"termid":"MONDO:0024649","xrefs":{"Monarch":{"xref_id":"0024649"}}}


id: MOD:00019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-isoleucine.","definition_xrefs":["PubMed:6692818","ChEBI:30009","RESID:AA0010","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine residue","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"Ile","type":"exact"},{"name":"Isoleucyl","type":"exact"},{"name":"L-erythro-isoleucine","type":"exact"},{"name":"L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00019"}


id: GO:1904154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie","PMID:18555783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein exit from endoplasmic reticulum","termid":"GO:0070863"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"positively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"activation of protein dislocation from ER","type":"narrow"},{"name":"activation of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"activation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"positive regulation of protein dislocation from ER","type":"exact"},{"name":"positive regulation of protein retrotranslocation from ER","type":"exact"},{"name":"positive regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up regulation of protein dislocation from ER","type":"exact"},{"name":"up regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up-regulation of protein dislocation from ER","type":"exact"},{"name":"up-regulation of protein retrotranslocation from ER","type":"exact"},{"name":"up-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"upregulation of protein dislocation from ER","type":"exact"},{"name":"upregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"upregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904154"}


id: PBO:0049451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 5","termid":"PBO:0049451"}


id: MONDO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to perceive facial expression, body language and intonation, rendering them unable to non-verbally perceive people's emotions and limiting that aspect of social interaction.","definition_xrefs":["DOID:0060149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"social emotional agnosia","synonyms":[{"name":"expressive agnosia","type":"exact"}],"termid":"MONDO:0000679","xrefs":{"Monarch":{"xref_id":"0000679"}}}


id: PBO:0066608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1","termid":"PBO:0066608"}


id: PBO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-9","termid":"PBO:0051429"}


id: GO:0140630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate -> all-trans-phytoene + 2 diphosphate.","definition_xrefs":["PMID:12641468","PMID:7896759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"all-trans-phytoene synthase activity","synonyms":[{"name":"phytoene synthase activity","type":"broad"}],"termid":"GO:0140630"}


id: MONDO:0021120
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A hormone producing endocrine neoplasm, associated with a hormonal syndrome.","definition_xrefs":["NCIT:C94759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"functioning endocrine neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:458881","ICDO:8158/1","UMLS:C2986655"],"synonyms":[{"name":"functioning endocrine neoplasm","type":"exact"},{"name":"functioning tumor","type":"exact"},{"name":"functioning tumour","type":"exact"}],"termid":"MONDO:0021120","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0021120"}}}


id: GO:0006032
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67347],"is_not":false,"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan catabolic process","termid":"GO:0006026"},{"relation_name":"is_a","term_name":"chitin metabolic process","termid":"GO:0006030"},{"relation_name":"is_a","term_name":"glucosamine-containing compound catabolic process","termid":"GO:1901072"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin catabolic process","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"beta-1,4-linked N-acetylglucosamine catabolic process","type":"exact"},{"name":"beta-1,4-linked N-acetylglucosamine catabolism","type":"exact"},{"name":"chitin breakdown","type":"exact"},{"name":"chitin catabolism","type":"exact"},{"name":"chitin degradation","type":"exact"}],"termid":"GO:0006032","terms_by_termid":{"GO:0006032":null}}


id: PBO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates adg1","termid":"PBO:0001952"}


id: PR:Q9P7C8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein SLD5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21206:SF0","PRO:DNx","OMA:SCHPO03471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein sld5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.21c","secondary_identifiers":["UniProtKB:Q9P7C8"],"synonyms":[{"name":"Spom972h-GINS4","type":"exact"}],"termid":"PR:Q9P7C8"}


id: GO:1901005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ubiquinone-6.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone-6 catabolic process (obsolete GO:1901005)","synonyms":[{"name":"ubiquinone-6 breakdown","type":"exact"},{"name":"ubiquinone-6 catabolism","type":"exact"},{"name":"ubiquinone-6 degradation","type":"exact"}],"termid":"GO:1901005"}


id: SO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A functional variant that changes the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_level_variant","synonyms":[{"name":"translational product level variant","type":"exact"}],"termid":"SO:0001553"}


id: PBO:0078649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-5","termid":"PBO:0078649"}


id: PBO:0004580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Pgp2","termid":"PBO:0004580"}


id: PBO:0081885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 835","termid":"PBO:0081885"}


id: PBO:0048287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNTL6 antisense RNA 1","termid":"PBO:0048287"}


id: MONDO:0005114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the species streptococcus pneumoniae.","definition_xrefs":["MESH:D011008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumococcal infection","secondary_identifiers":["UMLS:C0032269","EFO:0000772","MEDGEN:18528","ICD9:041.2","SCTID:16814004"],"synonyms":[{"name":"Streptococcus pneumoniae caused disease or disorder","type":"exact"},{"name":"Streptococcus pneumoniae disease or disorder","type":"exact"},{"name":"Streptococcus pneumoniae infection","type":"related"},{"name":"Streptococcus pneumoniae infections","type":"related"},{"name":"Streptococcus pneumoniae infectious disease","type":"exact"},{"name":"infection, Streptococcus pneumoniae","type":"related"},{"name":"infection, pneumococcal","type":"related"},{"name":"infections, Streptococcus pneumoniae","type":"related"},{"name":"infections, pneumococcal","type":"related"},{"name":"pneumococcal infection","type":"exact"},{"name":"pneumoniae infection, Streptococcus","type":"related"},{"name":"pneumoniae infections, Streptococcus","type":"related"}],"termid":"MONDO:0005114","xrefs":{"Monarch":{"xref_id":"0005114"}}}


id: GO:0035198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.","definition_xrefs":["PMID:15066283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"miRNA binding","synonyms":[{"name":"microRNA binding","type":"exact"}],"termid":"GO:0035198"}


id: MONDO:0012379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 3","secondary_identifiers":["MEDGEN:355337","UMLS:C1864959","OMIM:609958"],"synonyms":[{"name":"ASRT3","type":"related"},{"name":"asthma-related traits, susceptibility to, 3","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0012379","xrefs":{"Monarch":{"xref_id":"0012379"}}}


id: GO:0010768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a UV damage stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage (obsolete GO:0010768)","termid":"GO:0010768"}


id: GO:0036464
data:
  {"annotated_genes":["SJAG_02573","SJAG_01548","SJAG_03498","SJAG_03214","SJAG_03023","SJAG_03070","SJAG_03460","SJAG_05694","SJAG_04427","SJAG_03762","SJAG_04744","SJAG_01910","SJAG_01954","SJAG_02808","SJAG_00391","SJAG_04772","SJAG_01222","SJAG_00507","SJAG_01053","SJAG_03113","SJAG_03696","SJAG_02638","SJAG_03954","SJAG_03597","SJAG_03157","SJAG_02469","SJAG_02628","SJAG_02263","SJAG_02239","SJAG_03276","SJAG_04407","SJAG_04672","SJAG_02663","SJAG_04640","SJAG_01317","SJAG_01512","SJAG_03132","SJAG_16454","SJAG_04342","SJAG_00686","SJAG_02164","SJAG_05010","SJAG_03277","SJAG_02540","SJAG_01822","SJAG_01026","SJAG_01159","SJAG_03283","SJAG_02419","SJAG_01650","SJAG_04880","SJAG_03876","SJAG_00285","SJAG_00759","SJAG_01625","SJAG_16457","SJAG_04480","SJAG_00544","SJAG_02592","SJAG_00966","SJAG_02995","SJAG_03424","SJAG_00474","SJAG_02213","SJAG_04350","SJAG_01479","SJAG_00423","SJAG_01436","SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105528,74314,91885,105991,107258,94697,90034,72898,79736,95117,90240,96414,75014,79297,90694,92889,97437,111381,117582,89493,110292,110189,113630,94888,70904,90528,93351,93352,100251,105992,77002,94887,105638,89822,113925,90657,99250,90646,105898,98111,87864,73347,90604,88696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[74678,113186,79317,90649,73498,77940,76141,80021,71422,90036,79302,74126,72117,74653,77000,78146,80024,70708,70520,116902,75882,76309,76960,110192,77928,80062,115447,80386,70309,95920,79880,73136,100253,79114,74979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:15121898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein granule","termid":"GO:0035770"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Staufen granule","type":"narrow"}],"termid":"GO:0036464","terms_by_termid":{"GO:0000932":null,"GO:0010494":null}}


id: GO:1904786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["GOC:TermGenie","PMID:17476329","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of asymmetric protein localization involved in cell fate determination","termid":"GO:1904785"},{"relation_name":"negatively_regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"down regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"down regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"down regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"down regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"down regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"down-regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"down-regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"down-regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"down-regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"down-regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"downregulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"downregulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"downregulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"downregulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"downregulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"inhibition of asymmetric protein localisation involved in cell fate determination","type":"narrow"},{"name":"inhibition of asymmetric protein localization involved in cell fate commitment","type":"narrow"},{"name":"inhibition of asymmetric protein localization involved in cell fate determination","type":"narrow"},{"name":"inhibition of asymmetric protein localization resulting in cell fate commitment","type":"narrow"},{"name":"inhibition of cell fate commitment, asymmetric protein localization","type":"narrow"},{"name":"negative regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"negative regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"negative regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"negative regulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904786"}


id: PBO:0085040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential component of U5 snRNP; nuclear protein; physically interacts with Irr1p of cohesin complex; may link together proteins involved in chromosome segregation, mRNA splicing and DNA replication","termid":"PBO:0085040"}


id: GO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of phosphorylation of viral or host proteins in a host.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein phosphorylation (obsolete GO:0039612)","termid":"GO:0039612"}


id: GO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. Somatic muscles are striated muscle structures that connect to the exoskeleton or cuticle.","definition_xrefs":["GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle development","termid":"GO:0007525"}


id: MONDO:0014579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the WDR19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"Senior-Loken syndrome 8","secondary_identifiers":["UMLS:C4225376","OMIM:616307","GARD:16081","MEDGEN:905171"],"synonyms":[{"name":"SENIOR-Loken syndrome 8","type":"related"},{"name":"SLSN8","type":"related"},{"name":"Senior-Loken syndrome 8","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in WDR19","type":"exact"},{"name":"Senior-Loken syndrome type 8","type":"exact"},{"name":"WDR19 Senior-Loken syndrome","type":"exact"}],"termid":"MONDO:0014579","xrefs":{"Monarch":{"xref_id":"0014579"}}}


id: PBO:0086716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene","termid":"PBO:0086716"}


id: MOD:01153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an methylsulfanyl group (thiomethyl group).","definition_xrefs":["Unimod:39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthiolated residue","synonyms":[{"name":"Beta-methylthiolation","type":"related"},{"name":"Methylthio","type":"related"}],"termid":"MOD:01153"}


id: GO:0044611
data:
  {"annotated_genes":["SJAG_02757","SJAG_03182","SJAG_00375"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70916,75515,76753],"is_not":false,"summary":null,"term":"GO:0044611"}]},"cv_name":"cellular_component","definition":"A subcomplex of the nuclear pore complex (NPC) that forms the inner rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two inner rings are each composed of Nup192p, Nup188p, Nup170p and Nup157p. In vertebrates, the two inner rings are each composed of Nup205, Nup188 and Nup155. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup170 complex.","definition_xrefs":["PMID:19524430","PMID:18046406","PMID:22419078","GOC:dgf","PMID:20947011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00375":null,"SJAG_02757":null,"SJAG_03182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005643"],"is_obsolete":false,"name":"nuclear pore inner ring","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Nup170 complex","type":"exact"}],"termid":"GO:0044611","terms_by_termid":{"GO:0044611":null}}


id: GO:1904613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2,3,7,8-tetrachlorodibenzodioxine stimulus.","definition_xrefs":["PMID:23196670","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to 2,3,7,8-tetrachlorodibenzodioxine","termid":"GO:1904612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2,3,7,8-tetrachlorodibenzodioxine","synonyms":[{"name":"cellular response to TCDD","type":"exact"},{"name":"cellular response to dioxin","type":"exact"}],"termid":"GO:1904613"}


id: MONDO:0019786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe intellectual disability-epilepsy-anal anomalies-distal phalangeal hypoplasia is characterized by severe intellectual deficit, epilepsy, hypoplasia of the terminal phalanges, and an anteriorly displaced anus. It has been described in two sisters born to consanguineous parents. The syndrome is transmitted as an autosomal recessive trait and appears to be caused by anomalies in to chromosome regions, one localized to chromosome 1 and the other to chromosome 14.","definition_xrefs":["Orphanet:94066"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe intellectual disability-epilepsy-anal anomalies-distal phalangeal hypoplasia","secondary_identifiers":["GARD:19247","UMLS:C4510007","MEDGEN:1372948"],"termid":"MONDO:0019786","xrefs":{"Monarch":{"xref_id":"0019786"}}}


