# terms

id: MONDO:0008291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porokeratosis plantaris palmaris et disseminata (PPPD) is a rare form of porokeratosis occurring mainly in adolescence and characterized by small pruritic or painful keratotic papules that first appear on the palms and soles, and may gradually become generalized.","definition_xrefs":["Orphanet:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis plantaris palmaris et disseminata","secondary_identifiers":["UMLS:C0162838","MEDGEN:56517","SCTID:718218005","OMIM:175850","GARD:16542"],"synonyms":[{"name":"POROK2","type":"related"},{"name":"palmar, plantar and disseminated porokeratosis","type":"exact"},{"name":"porokeratosis 2, palmar, plantar, and disseminated","type":"exact"},{"name":"porokeratosis 2, palmar, plantar, and disseminated type","type":"related"},{"name":"porokeratosis palmaris Et plantaris disseminata","type":"related"},{"name":"porokeratosis plantaris palmaris et disseminata","type":"exact"},{"name":"porokeratosis, palmar, plantar, and disseminated","type":"related"},{"name":"porokeratosis, palmar, plantar, and disseminated, 1","type":"related"}],"termid":"MONDO:0008291","xrefs":{"Monarch":{"xref_id":"0008291"}}}


id: MONDO:0006933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor-like inflammatory lesion of the lung that is composed of plasma cells and fibrous tissue. It is also known as an inflammatory pseudotumor, often with calcification and measuring between 2 and 5 cm in diameter.","definition_xrefs":["MESH:D016726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary plasma cell granuloma","secondary_identifiers":["UMLS:C0085269","MEDGEN:38832","SCTID:1648002","DOID:3677","ICD9:518.89","icd11.foundation:215620908"],"synonyms":[{"name":"granuloma, plasma cell, pulmonary","type":"exact"},{"name":"lymphocytic pseudotumor of lung","type":"exact"},{"name":"sclerosing hemangiocytoma of lung","type":"exact"}],"termid":"MONDO:0006933","xrefs":{"Monarch":{"xref_id":"0006933"}}}


id: PBO:0082615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coiled protein of unknown function; identified as a high-copy suppressor of a dbp5 mutation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082615"}


id: PATO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000126 absolute mass (obsolete PATO:0000126)","termid":"PATO:0000126"}


id: PBO:0080753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 1","termid":"PBO:0080753"}


id: PBO:0085531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication","termid":"PBO:0085531"}


id: PBO:0090839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER packaging chaperone for amino acid permeases Psh3","termid":"PBO:0090839"}


id: PBO:0056941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-1 host gene","termid":"PBO:0056941"}


id: PATO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000926 intercross fertility (obsolete PATO:0000926)","termid":"PATO:0000926"}


id: GO:0015443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out).","definition_xrefs":["EC:3.6.3.15"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-transporting two-sector ATPase activity (obsolete GO:0015443)","synonyms":[{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0015443"}


id: GO:1905853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["GOC:TermGenie","GOC:aruk","PMID:7683668","GO_REF:0000059","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heparan sulfate binding (obsolete GO:1905853)","termid":"GO:1905853"}


id: PBO:0067353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 451, pseudogene","termid":"PBO:0067353"}


id: MONDO:0005287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders in which there is a delay in development based on that expected for a given age level or stage of development. These impairments or disabilities originate before age 18, may be expected to continue indefinitely, and constitute a substantial impairment. Biological and nonbiological factors are involved in these disorders. (From American Psychiatric Glossary, 6th ed)","definition_xrefs":["MESH:D002658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disability","secondary_identifiers":["EFO:0003852"],"termid":"MONDO:0005287","xrefs":{"Monarch":{"xref_id":"0005287"}}}


id: MONDO:0014393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary lymphedema in which the cause of the disease is a mutation in the VEGFC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 4","secondary_identifiers":["DOID:0070209","UMLS:C4747769","MEDGEN:1651756","GARD:16468","OMIM:615907"],"synonyms":[{"name":"LMPH1D","type":"related"},{"name":"VEGFC hereditary lymphedema","type":"exact"},{"name":"hereditary lymphedema caused by mutation in VEGFC","type":"exact"},{"name":"lymphedema, hereditary, 1D","type":"exact"},{"name":"lymphedema, hereditary, type 1D","type":"exact"}],"termid":"MONDO:0014393","xrefs":{"Monarch":{"xref_id":"0014393"}}}


id: PBO:0068136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 443","termid":"PBO:0068136"}


id: PBO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn11","termid":"PBO:0001838"}


id: PBO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036129"}


id: MONDO:0018308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multicystic, tumor-like hamartomatous lesion that arises from the liver during fetal development. Clinically, it usually presents as an abdominal mass associated with abdominal distention. Following resection, the prognosis is usually good.","definition_xrefs":["NCIT:C5751"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare tumor of liver and intrahepatic biliary tract (obsolete MONDO:0017632)","termid":"MONDO:0017632"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"mesenchymal hamartoma","termid":"MONDO:0024478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver mesenchymal hamartoma","secondary_identifiers":["Orphanet:386","MEDGEN:232278","GARD:2651","UMLS:C1333971","SCTID:715397000"],"synonyms":[{"name":"MHL","type":"exact"},{"name":"VMC","type":"exact"},{"name":"Von Meyenburg complexes disease","type":"exact"},{"name":"biliary hamartoma","type":"exact"},{"name":"hepatic cystic hamartoma","type":"related"},{"name":"hepatic mesenchymal hamartoma","type":"exact"},{"name":"liver MH","type":"exact"},{"name":"liver mesenchymal hamartoma","type":"exact"},{"name":"mesenchymal hamartoma of liver","type":"exact"},{"name":"mesenchymal hamartoma of the liver","type":"exact"}],"termid":"MONDO:0018308","xrefs":{"Monarch":{"xref_id":"0018308"}}}


id: PBO:0070079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 36, pseudogene","termid":"PBO:0070079"}


id: PBO:0035912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_antisense_RNA_level_during_vegetative_growth","termid":"PBO:0035912"}


id: MONDO:0009520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-hydroxy-3-methylglutaric aciduria (3HMG) is an organic aciduria, due to deficiency of 3-hydroxy-3-methylglutaryl-CoA-lyase (a key enzyme in ketogenesis and leucine metabolism) usually presenting in infancy with episodes of metabolic decompensation triggered by periods of fasting or infections, which when left untreated are life-threatening and may lead to neurological sequelae.","definition_xrefs":["Orphanet:20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"3-hydroxy-3-methylglutaric aciduria","secondary_identifiers":["NCIT:C84523","NANDO:2200497","NANDO:2201119","UMLS:C0268601","DOID:0070541","MESH:C538324","icd11.foundation:795785192","GARD:8387","MEDGEN:78692","SCTID:410059004","OMIM:246450"],"synonyms":[{"name":"3-OH 3-Methyl glutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase deficiency","type":"exact"},{"name":"HL deficiency","type":"related"},{"name":"HMG CoA lyase deficiency","type":"related"},{"name":"HMG-CoA lyase deficiency","type":"exact"},{"name":"HMG-Coa lyase deficiency","type":"related"},{"name":"HMGCLD","type":"related"},{"name":"Hmgcl deficiency","type":"related"},{"name":"Hydroxymethylglutaric aciduria","type":"exact"},{"name":"defect in leucine metabolism","type":"related"},{"name":"deficiency of hydroxymethylglutaryl-CoA lyase","type":"exact"},{"name":"hydroxymethylglutaryl-CoA lyase deficiency","type":"exact"}],"termid":"MONDO:0009520","xrefs":{"Monarch":{"xref_id":"0009520"}}}


id: PBO:0001552
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for activated protein Kinase of S. Pombe","termid":"PBO:0001552"}


id: PBO:0091109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC subunit Sfc7","termid":"PBO:0091109"}


id: PBO:0043259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 17","termid":"PBO:0043259"}


id: MONDO:0005385
data:
  {"annotated_genes":["SJAG_01344","SJAG_03081","SJAG_02431","SJAG_03258","SJAG_02959","SJAG_00993","SJAG_01181","SJAG_00364","SJAG_02485","SJAG_00210","SJAG_04745","SJAG_03703","SJAG_05213","SJAG_02582","SJAG_03785","SJAG_02977","SJAG_02648","SJAG_00737","SJAG_02342","SJAG_02923","SJAG_00495","SJAG_00169","SJAG_02063","SJAG_03453","SJAG_03145","SJAG_02218","SJAG_02580","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87426,87427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007568"},{"annotations":[85415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012730"},{"annotations":[87006,87007,87005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013768"},{"annotations":[86054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"},{"annotations":[86417,86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"},{"annotations":[86285,86284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014768"},{"annotations":[86176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[87278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[87654,87655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012011"},{"annotations":[87665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007781"},{"annotations":[86807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013806"},{"annotations":[85974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007672"},{"annotations":[87279,87280,87281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008895"},{"annotations":[87264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[86806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[86830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[86309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"},{"annotations":[86682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[87260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013452"},{"annotations":[87612,87611,87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[86131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[87001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"}]},"cv_name":"mondo","definition":"A general term used to describe any disease affecting blood vessels]. It includes vascular abnormalities caused by degenerative, metabolic and inflammatory conditions, embolic diseases, coagulative disorders, and functional disorders such as posteri or reversible encephalopathy syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00210":null,"SJAG_00364":null,"SJAG_00495":null,"SJAG_00737":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01344":null,"SJAG_02063":null,"SJAG_02218":null,"SJAG_02286":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02485":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_02959":null,"SJAG_02977":null,"SJAG_03081":null,"SJAG_03145":null,"SJAG_03258":null,"SJAG_03453":null,"SJAG_03703":null,"SJAG_03785":null,"SJAG_04745":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"vascular disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0004264","NANDO:2100294","NCIT:C35117","SCTID:27550009","DOID:178","UMLS:C0042373","ICD10CM:I70-I79","ICD10CM:I00-I99","ICD9:442.9","MEDGEN:22621","MESH:D014652"],"synonyms":[{"name":"disease of vasculature","type":"exact"},{"name":"disease or disorder of vasculature","type":"exact"},{"name":"disorder of vasculature","type":"exact"},{"name":"vascular disorder","type":"exact"},{"name":"vascular tissue disease","type":"exact"},{"name":"vasculature disease","type":"exact"},{"name":"vasculature disease or disorder","type":"exact"},{"name":"vasculopathy","type":"related"}],"termid":"MONDO:0005385","terms_by_termid":{"MONDO:0007154":null,"MONDO:0007568":null,"MONDO:0007672":null,"MONDO:0007781":null,"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0008895":null,"MONDO:0009329":null,"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0010829":null,"MONDO:0011257":null,"MONDO:0012011":null,"MONDO:0012371":null,"MONDO:0012730":null,"MONDO:0013186":null,"MONDO:0013452":null,"MONDO:0013458":null,"MONDO:0013542":null,"MONDO:0013644":null,"MONDO:0013768":null,"MONDO:0013805":null,"MONDO:0013806":null,"MONDO:0014768":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0005385"}}}


id: PBO:0057646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1238","termid":"PBO:0057646"}


id: MONDO:0015860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anomaly of puberty or/and menstrual cycle (obsolete MONDO:0015860)","secondary_identifiers":["Orphanet:180208"],"termid":"MONDO:0015860","xrefs":{"Monarch":{"xref_id":"0015860"}}}


id: PBO:0063299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma constant","termid":"PBO:0063299"}


id: GO:0018172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to peptidyl-L-3',4',5'-dihydroxyphenylalanine.","definition_xrefs":["RESID:AA0263"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-3',4',5'-trihydroxyphenylalanine biosynthetic process from peptidyl-tyrosine (obsolete GO:0018172)","synonyms":[{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018172"}


id: GO:1904907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","PMID:26373281","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904907"}


id: PBO:0084735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermediate peptidase; cleaves destabilizing N-terminal residues of a subset of proteins upon import, after their cleavage by mitochondrial processing peptidase (Mas1p-Mas2p); may contribute to mitochondrial iron homeostasis","termid":"PBO:0084735"}


id: PBO:0048528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 4","termid":"PBO:0048528"}


id: GO:0097494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a vesicle.","definition_xrefs":["PMID:20007772","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle size","termid":"GO:0097494"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: PBO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex beta subunit Cct2","termid":"PBO:0000506"}


id: MOD:00254
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["PubMed:217003","PubMed:209034","PubMed:1702164","PubMed:6264310","RESID:AA0249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-RNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-ribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-RNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00254"}


id: PBO:0064922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 4","termid":"PBO:0064922"}


id: PBO:0111822
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAT repeat protein","termid":"PBO:0111822"}


id: GO:1905065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","PMID:19088079","GOC:BHF","GOC:rph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"activation of VSMC differentiation","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell differentiation","type":"narrow"},{"name":"activation of vascular smooth muscle cell differentiation","type":"narrow"},{"name":"positive regulation of VSMC differentiation","type":"exact"},{"name":"positive regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"up regulation of VSMC differentiation","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of VSMC differentiation","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of VSMC differentiation","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905065"}


id: GO:0019049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus interferes with the ability of the host to mount a defense in response to its presence. Host defenses may be induced by the presence of the virus or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:1555811272"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-mediated perturbation of host defense response (obsolete GO:0019049)","secondary_identifiers":["Reactome:R-HSA-164938","Reactome:R-HSA-164944","Reactome:R-HSA-168305","Reactome:R-HSA-169131"],"synonyms":[{"name":"evasion of host defenses by virus","type":"narrow"},{"name":"mitigation of host antiviral defense response","type":"narrow"},{"name":"mitigation of host defenses by virus","type":"exact"},{"name":"perturbation of host defense response by virus","type":"exact"},{"name":"regulation by virus of antiviral response","type":"narrow"},{"name":"regulation of defense response to virus by virus","type":"exact"},{"name":"viral host defence evasion","type":"narrow"},{"name":"viral host defense evasion","type":"narrow"},{"name":"viral regulation of antiviral response","type":"exact"}],"termid":"GO:0019049"}


id: PBO:0017776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab8","termid":"PBO:0017776"}


id: PBO:0113140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor-like protein; involved in negatively regulating TORC1 activity; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0113140"}


id: GO:0038048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a dynorphin peptide, and transmitting the signal across the membrane by activating an associated G-protein. Dynorphin is any opioid peptide that is generated by cleavage of the precursor protein prodynorphin.","definition_xrefs":["Wikipedia:Dynorphin","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"dynorphin receptor activity","synonyms":[{"name":"kappa-opioid receptor activity","type":"related"}],"termid":"GO:0038048"}


id: FYPO:0003992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to menadione","synonyms":[{"name":"normal RNA accumulation during cellular response to menadione","type":"related"},{"name":"normal RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to menadione","type":"narrow"},{"name":"normal transcript level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0003992"}


id: MONDO:1012441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial episodic spinocerebellar ataxia, non-human animal","termid":"MONDO:1011889"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial episodic spinocerebellar ataxia, sheep","secondary_identifiers":["OMIA:001723-9940"],"termid":"MONDO:1012441","xrefs":{"Monarch":{"xref_id":"1012441"}}}


id: SO:1000141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome that occurred by the division of a larger chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_fission","synonyms":[{"name":"chromosome fission","type":"exact"}],"termid":"SO:1000141"}


id: PBO:0060553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of P-body association","termid":"PBO:0060553"}


id: PBO:0054984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2398","termid":"PBO:0054984"}


id: _global:occurs_at
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_at","secondary_identifiers":["GOREL:0000501"],"termid":"_global:occurs_at"}


id: PBO:0031479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_internalization","termid":"PBO:0031479"}


id: PBO:0074350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomedin B domain containing 1, pseudogene","termid":"PBO:0074350"}


id: PBO:0054845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2259","termid":"PBO:0054845"}


id: GO:0048795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the swim bladder is generated and organized. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder morphogenesis","synonyms":[{"name":"gas bladder morphogenesis","type":"exact"}],"termid":"GO:0048795"}


id: PR:O42917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eso1 gene.","definition_xrefs":["UniProtKB:O42917","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase eso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.11","synonyms":[{"name":"ECO1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eso1","type":"exact"},{"name":"sister chromatid cohesion protein eso1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42917"}


id: GO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["GOC:dph","GOC:kmv","PMID:18329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"C-rich strand telomeric DNA binding","termid":"GO:0061730"}


id: PBO:0077977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (CGC) 5-1","termid":"PBO:0077977"}


id: GO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.","definition_xrefs":["GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ or tissue specific immune response","synonyms":[{"name":"immune response in organ or tissue","type":"exact"}],"termid":"GO:0002251"}


id: MONDO:0008442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-neuropathy-poikiloderma syndrome is a complex form of hereditary spastic paraplegia characterized by spastic paraplegia, demyelinating peripheral sensorimotor neuropathy, poikiloderma (manifesting with loss of eyebrows and eyelashes in childhood in addition to delicate, smooth, and wasted skin) and distal amyotrophy (presenting after puberty). There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:2821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spastic paraplegia-neuropathy-poikiloderma syndrome","secondary_identifiers":["MEDGEN:355814","OMIM:182815","MESH:C536870","GARD:4921","UMLS:C1866851"],"synonyms":[{"name":"Antinolo-Nieto-Borrego syndrome","type":"exact"},{"name":"familial spastic paraplegia with neuropathy and poikiloderma","type":"related"},{"name":"spastic paraplegia neuropathy poikiloderma","type":"related"},{"name":"spastic paraplegia with neuropathy and poikiloderma","type":"related"}],"termid":"MONDO:0008442","xrefs":{"Monarch":{"xref_id":"0008442"}}}


id: PBO:0071591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 8","termid":"PBO:0071591"}


id: PBO:0026696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026696"}


id: MONDO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 22, primary, autosomal recessive","secondary_identifiers":["GARD:16279","UMLS:C4693834","OMIM:617984","MEDGEN:1635688"],"synonyms":[{"name":"MCPH22","type":"related"},{"name":"microcephaly 22, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054805","xrefs":{"Monarch":{"xref_id":"0054805"}}}


id: GO:0019599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-4-hydroxymandelate, the anion of (R)-4-hydroxymandelic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"(R)-4-hydroxymandelate metabolic process","termid":"GO:0046431"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(R)-4-hydroxymandelate catabolic process","secondary_identifiers":["MetaCyc:4-HYDROXYMANDELATE-DEGRADATION-PWY"],"synonyms":[{"name":"(R)-4-hydroxymandelate breakdown","type":"exact"},{"name":"(R)-4-hydroxymandelate catabolism","type":"exact"},{"name":"(R)-4-hydroxymandelate degradation","type":"exact"}],"termid":"GO:0019599"}


id: PBO:0067599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 762, pseudogene","termid":"PBO:0067599"}


id: GO:1902508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of 2-iminoacetate synthase activity.","definition_xrefs":["PMID:12650933","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"2-iminoacetate synthase complex","synonyms":[{"name":"ThiH-ThiG complex","type":"narrow"}],"termid":"GO:1902508"}


id: PBO:0053553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 560","termid":"PBO:0053553"}


id: GO:0033093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.","definition_xrefs":["PMID:16087708","PMID:11935287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"Weibel-Palade body","secondary_identifiers":["Wikipedia:Weibel-Palade_body"],"termid":"GO:0033093"}


id: PBO:0067888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 190","termid":"PBO:0067888"}


id: GO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron ion","synonyms":[{"name":"response to iron","type":"exact"}],"termid":"GO:0010039"}


id: PBO:0026634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5_acetylation","termid":"PBO:0026634"}


id: GO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinamide mononucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinamide.","definition_xrefs":["RHEA:16149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01271","EC:2.4.2.12","MetaCyc:2.4.2.12-RXN","Reactome:R-HSA-197250"],"synonyms":[{"name":"NMN diphosphorylase activity","type":"related"},{"name":"NMN pyrophosphorylase activity","type":"related"},{"name":"NMN synthetase activity","type":"related"},{"name":"nicotinamide mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide mononucleotide synthetase activity","type":"related"},{"name":"nicotinamide-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047280"}


id: PBO:0045767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA delta isomerase 2","termid":"PBO:0045767"}


id: PBO:0074172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 3","termid":"PBO:0074172"}


id: PBO:0063794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 21B","termid":"PBO:0063794"}


id: MONDO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the prostate gland","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate adenocarcinoma","secondary_identifiers":["NCIT:C2919","SCTID:399490008","DOID:2526","MEDGEN:764","ONCOTREE:PRAD","UMLS:C0007112","EFO:0000673"],"synonyms":[{"name":"adenocarcinoma of prostate","type":"exact"},{"name":"adenocarcinoma of the prostate","type":"exact"},{"name":"prad","type":"related"},{"name":"prostate adenocarcinoma","type":"exact"},{"name":"prostate gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0005082","xrefs":{"Monarch":{"xref_id":"0005082"}}}


id: GO:0021835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the migration of interneuron precursors up a concentration gradient towards the olfactory bulb.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in embryonic olfactory bulb interneuron precursor migration","synonyms":[{"name":"positive chemotaxis involved in embryonic olfactory bulb interneuron precursor migration","type":"exact"}],"termid":"GO:0021835"}


id: PR:Q9P3T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15139:SF0","OMA:SCHPO01455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-specific chaperone C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.08c","secondary_identifiers":["UniProtKB:Q9P3T8"],"synonyms":[{"name":"CFC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TBCC","type":"exact"},{"name":"tubulin-folding cofactor C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3T8"}


id: PBO:0069352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 612, pseudogene","termid":"PBO:0069352"}


id: GO:0045511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-25.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 binding","termid":"GO:0019975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-25 binding","synonyms":[{"name":"IL-25 binding","type":"exact"}],"termid":"GO:0045511"}


id: PBO:0091258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR family","termid":"PBO:0091258"}


id: PBO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 6 pseudogene","termid":"PBO:0062059"}


id: PR:Q9UTL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C144.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.05","synonyms":[{"name":"Spom972h-SPAC144.05","type":"exact"}],"termid":"PR:Q9UTL9"}


id: PBO:0112608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol esterase/lipase implicated in lipid catabolism or detoxification","termid":"PBO:0112608"}


id: GO:0030877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome.","definition_xrefs":["PMID:14600025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"beta-catenin destruction complex","secondary_identifiers":["GO:0034742","GO:0034747"],"synonyms":[{"name":"23S APC complex","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex","type":"exact"},{"name":"BDC","type":"exact"},{"name":"beta-catenin degradation complex","type":"exact"}],"termid":"GO:0030877"}


id: PR:O74479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit O, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05006","PANTHER:PTHR11910:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.06","secondary_identifiers":["UniProtKB:O74479"],"synonyms":[{"name":"ATP synthase chain 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OSCP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5O","type":"exact"},{"name":"oligomycin sensitivity conferral protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74479"}


id: GO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetramer of retroviral integrase subunits tightly associated with a pair of viral DNA ends. Functions to insert viral DNA into a host cell chromosome.","definition_xrefs":["PMID:20118915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"retroviral intasome","termid":"GO:0044834"}


id: PBO:0056044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"listerin E3 ubiquitin protein ligase 1","termid":"PBO:0056044"}


id: GO:0101008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mec"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to increased salt (obsolete GO:0101008)","termid":"GO:0101008"}


id: GO:0099631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasmic component of the postsynaptic endocytic zone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone","termid":"GO:0098843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"postsynaptic endocytic zone cytoplasmic component","termid":"GO:0099631"}


id: GO:0016881
data:
  {"annotated_genes":["SJAG_04031","SJAG_03224","SJAG_02364","SJAG_01139","SJAG_01897","SJAG_00988","SJAG_00529","SJAG_03679","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097429"},{"annotations":[79722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008841"},{"annotations":[77685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004357"},{"annotations":[70816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004363"},{"annotations":[72736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004592"},{"annotations":[78943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004632"},{"annotations":[77124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004639"},{"annotations":[72596,79724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004326"},{"annotations":[88583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_00988":null,"SJAG_01139":null,"SJAG_01351":null,"SJAG_01897":null,"SJAG_02364":null,"SJAG_03224":null,"SJAG_03679":null,"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"acid-amino acid ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.2.-"],"synonyms":[{"name":"peptide synthase activity","type":"exact"}],"termid":"GO:0016881","terms_by_termid":{"GO:0004326":null,"GO:0004357":null,"GO:0004363":null,"GO:0004592":null,"GO:0004632":null,"GO:0004639":null,"GO:0004835":null,"GO:0008841":null,"GO:0097429":null}}


id: GO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of the enzyme 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-kinase regulator activity","synonyms":[{"name":"1-phosphatidylinositol 3-kinase regulator activity","type":"exact"},{"name":"phosphatidylinositol 3-kinase, class I, regulator activity","type":"narrow"}],"termid":"GO:0046935"}


id: PBO:0112742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, posibly RNA binding, low similarity to ribosomal protein L3","termid":"PBO:0112742"}


id: GO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of testosterone, an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4 C-5.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"testosterone biosynthetic process","termid":"GO:0061370"}


id: MONDO:0020301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome due to paternal 15q11q13 deletion","secondary_identifiers":["GARD:19576","Orphanet:98793","MEDGEN:1826129","UMLS:C5681699"],"termid":"MONDO:0020301","xrefs":{"Monarch":{"xref_id":"0020301"}}}


id: GO:0097516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel bundle of actin filaments at the core of a microvillus.","definition_xrefs":["GOC:cjm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"microvillus","termid":"GO:0005902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"microvillar actin bundle","termid":"GO:0097516"}


id: GO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0036129)","termid":"GO:0036129"}


id: PBO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H1","termid":"PBO:0050565"}


id: FYPO:0006735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tschimganine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to tschimganine","synonyms":[{"name":"resistance to TMN","type":"exact"},{"name":"resistance to tschimganine during mitotic cell cycle","type":"related"},{"name":"resistance to tschimganine during vegetative growth","type":"exact"},{"name":"resistant to tschimganine","type":"exact"}],"termid":"FYPO:0006735"}


id: PBO:0045258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 2, lysosomal","termid":"PBO:0045258"}


id: GO:1990096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion.","definition_xrefs":["PMID:16166371","GOC:kmv","PMID:12869585"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to superoxide (obsolete GO:1990096)","termid":"GO:1990096"}


id: MOD:00185
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-4'-bromophenylalanine.","definition_xrefs":["PubMed:2076468","PubMed:9033387","RESID:AA0176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-4'-bromophenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(4-bromophenyl)propanoic acid","type":"exact"},{"name":"4'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-4'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"p-bromophenylalanine","type":"exact"},{"name":"para-bromophenylalanine","type":"exact"}],"termid":"MOD:00185"}


id: PBO:0049978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 2B","termid":"PBO:0049978"}


id: FYPO:0007177
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119516],"is_not":false,"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119505,119506,119513,119517],"is_not":false,"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abolished protein localization to medial cortex during mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during mitotic interphase","type":"exact"},{"name":"abolished protein localization to medial cortex during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to medial ring during mitotic interphase","type":"exact"},{"name":"protein localization to medial cortex abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007177","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: GO:0106278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the UDP-N_acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"regulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106278"}


id: PBO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMT1-associated colon cancer repressed lncRNA 1","termid":"PBO:0044526"}


id: GO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin silencing complex that binds and bridges separate nucleosomal histones resulting in heterochromatin assembly and chromatin looping.","definition_xrefs":["GOC:bhm","GOC:dph","PMID:17540172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin silencing complex","termid":"GO:0005677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"chromatin lock complex","synonyms":[{"name":"nucleosome bridging complex","type":"related"}],"termid":"GO:0061793"}


id: GO:0006912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete phagosome formation (obsolete GO:0006912)","synonyms":[{"name":"phagosome formation","type":"exact"}],"termid":"GO:0006912"}


id: GO:0006376
data:
  {"annotated_genes":["SJAG_03983","SJAG_04163","SJAG_02304","SJAG_02573","SJAG_01654","SJAG_01015","SJAG_04911","SJAG_02279","SJAG_03469","SJAG_04214","SJAG_02843","SJAG_01301","SJAG_00225","SJAG_01440","SJAG_00147","SJAG_00474","SJAG_01214","SJAG_01870","SJAG_00058","SJAG_05009"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74610,77630],"is_not":false,"summary":null,"term":"GO:0006376"},{"annotations":[101569,73490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000389"},{"annotations":[95263,95516,91904,110379,94339,110940,112676,98163,79909,106202,110954,113585,102866,103027,95935,115549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000395"}]},"cv_name":"biological_process","definition":"Selection of a splice site by components of the assembling spliceosome.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00474":null,"SJAG_01015":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02573":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0065003","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mRNA splice site recognition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spliceosomal E complex biosynthesis","type":"narrow"},{"name":"spliceosomal E complex formation","type":"narrow"},{"name":"spliceosomal commitment complex biosynthesis","type":"narrow"},{"name":"spliceosomal commitment complex formation","type":"narrow"}],"termid":"GO:0006376","terms_by_termid":{"GO:0000389":null,"GO:0000395":null,"GO:0006376":null}}


id: PBO:0058592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-3","termid":"PBO:0058592"}


id: PATO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000250 spinal reflex (obsolete PATO:0000250)","termid":"PATO:0000250"}


id: GO:0140915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a zymogen granule.","definition_xrefs":["PMID:20133611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into secretory vesicle","termid":"GO:0140914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"zinc ion import into zymogen granule","termid":"GO:0140915"}


id: MONDO:0014802
data:
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id: GO:0009376
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id: PR:P42881
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id: PBO:0031300
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id: PBO:0073781
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id: PBO:0069752
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id: GO:0016817
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id: MONDO:0010653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndrome characterized by intellectual deficiency, microcephaly, leanness and mild short stature.","definition_xrefs":["Orphanet:3242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renpenning syndrome","secondary_identifiers":["DOID:0060179","GARD:9509","NCIT:C165533","OMIM:309500","SCTID:699669001","ICD9:759.89","UMLS:C0796135","MESH:C537761","MEDGEN:208670","icd11.foundation:1415315699"],"synonyms":[{"name":"Golabi-Ito-Hall syndrome","type":"exact"},{"name":"MRXS3","type":"related"},{"name":"MRXS8","type":"related"},{"name":"RENS1","type":"related"},{"name":"Renpenning syndrome","type":"exact"},{"name":"Renpenning syndrome 1","type":"related"},{"name":"Renpenning syndrome type 1","type":"exact"},{"name":"Sutherland-Haan X-linked intellectual disability syndrome","type":"exact"},{"name":"Sutherland-Haan X-linked mental retardation syndrome","type":"exact"},{"name":"Sutherland-Haan syndrome","type":"related"},{"name":"X-linked intellectual disability Renpenning type","type":"exact"},{"name":"X-linked intellectual disability due to PQBP1 mutations","type":"exact"},{"name":"X-linked intellectual disability syndromic 3","type":"related"},{"name":"X-linked intellectual disability with spastic diplegia","type":"exact"},{"name":"X-linked intellectual disability, Renpenning type","type":"exact"},{"name":"X-linked mental retardation Renpenning type","type":"exact"},{"name":"X-linked mental retardation syndromic 3","type":"related"},{"name":"X-linked mental retardation with spastic diplegia","type":"exact"},{"name":"intellectual disability, X-linked 55","type":"related"},{"name":"intellectual disability, X-linked Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, syndromic 3","type":"related"},{"name":"intellectual disability, X-linked, syndromic 8","type":"related"},{"name":"intellectual disability, X-linked, with spastic diplegia","type":"related"},{"name":"mental retardation, X-linked 55","type":"related"},{"name":"mental retardation, X-linked Renpenning type","type":"related"},{"name":"mental retardation, X-linked, Renpenning type","type":"related"},{"name":"mental retardation, X-linked, syndromic 3","type":"related"},{"name":"mental retardation, X-linked, syndromic 8","type":"related"},{"name":"mental retardation, X-linked, with spastic diplegia","type":"related"},{"name":"renpenning syndrome, X-linked recessive","type":"exact"},{"name":"syndromic X-linked intellectual disability 8","type":"exact"},{"name":"syndromic X-linked mental retardation 8","type":"exact"}],"termid":"MONDO:0010653","xrefs":{"Monarch":{"xref_id":"0010653"}}}


id: MONDO:0009807
data:
  {"annotated_genes":["SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A usually aggressive malignant bone-forming mesenchymal neoplasm, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.","definition_xrefs":["NCIT:C9145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"osteosarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:OS","UMLS:C0029463","MEDGEN:10501","DOID:3347","HP:0002669","EFO:0000637","ICDO:9180/3","MESH:D012516","NANDO:2200048"],"synonyms":[{"name":"bone tissue neoplasm","type":"broad"},{"name":"osteogenic sarcoma","type":"exact"},{"name":"osteoid sarcoma","type":"exact"},{"name":"osteosarcoma","type":"exact"},{"name":"osteosarcoma (disease)","type":"exact"},{"name":"osteosarcoma, malignant","type":"exact"},{"name":"sarcoma of osteoid","type":"exact"}],"termid":"MONDO:0009807","terms_by_termid":{"MONDO:0002629":null},"xrefs":{"Monarch":{"xref_id":"0009807"}}}


id: PBO:0058187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4480","termid":"PBO:0058187"}


id: MONDO:0014244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy type 7 (HSAN7) is a genetic condition that causes the inability to feel pain, excessive sweating, and gastrointestinal issues. Gastrointestinal issues can cause failure to thrive, painful constipation, and diarrhea. The constipation is due to intestinal dysmotility, where the the muscles and nerves of the digestive system do not move food through the digestive tract like it should. Signs and symptoms of HSAN7 usually appear at birth or during infancy. The inability to feel pain often leads to repeated, severe injuries, including bone fractures and joint dislocations. People with HSAN7 may also heal slowly putting them at risk for further complications, such as infection. Excessive sweating may cause itching. Other features may include partial insensitivity to cold and hot temperatures, mild muscle weakness, and motor skill delays. HSAN7 is not known to affect learning or intelligence. Treatment of HSAN7 aims to prevent injury and treat gastrointestinal and orthopedic problems. HSAN7 is caused by a mutation in the SCN11A gene. People with HSAN7 have a 1 in 2 or 50% chance of passing the condition on to each of their children. This pattern of inheritance is called ' autosomal dominant.'","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 7","secondary_identifiers":["NCIT:C125388","GARD:12732","Orphanet:391397","DOID:0070149","MEDGEN:816212","OMIM:615548","UMLS:C3809882"],"synonyms":[{"name":"CIP with hyperhidrosis and gastrointestinal dysfunction","type":"exact"},{"name":"HSAN 7","type":"related"},{"name":"HSAN VII","type":"exact"},{"name":"HSAN with hyperhidrosis and gastrointestinal dysfunction","type":"exact"},{"name":"HSAN7","type":"exact"},{"name":"SCN11A autosomal dominant hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"autosomal dominant hereditary sensory and autonomic neuropathy caused by mutation in SCN11A","type":"exact"},{"name":"congenital insensitivity to pain with hyperhidrosis and gastrointestinal dysfunction","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type VII","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy with hyperhidrosis and gastrointestinal dysfunction","type":"exact"},{"name":"insensitivity to pain, congenital, with gastrointestinal dysfunction and hyperhidrosis","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type 7","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type VII","type":"related"}],"termid":"MONDO:0014244","xrefs":{"Monarch":{"xref_id":"0014244"}}}


id: GO:0034860
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + reduced acceptor = benzothiazole + hydrogen sulfide + oxidized acceptor.","definition_xrefs":["UM-BBD_reactionID:r1288"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole desulfurase activity (obsolete GO:0034860)","termid":"GO:0034860"}


id: MONDO:0004802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by infiltration of the lung with eosinophils due to inflammation or other disease processes. Major eosinophilic lung diseases are the eosinophilic pneumonias caused by infections, allergens, or toxic agents.","definition_xrefs":["MESH:D011657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"pulmonary eosinophilia","secondary_identifiers":["SCTID:367542003","icd11.foundation:544479555","UMLS:C0034068","ICD9:518.3","DOID:9498","MEDGEN:46208"],"termid":"MONDO:0004802","xrefs":{"Monarch":{"xref_id":"0004802"}}}


id: GO:0102318
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxystreptamine + UDP-alpha-D-glucose = 2'-deamino-2'-hydroxyparomamine + UDP(3-) + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"2-deoxystreptamine glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13121","RHEA:34063"],"termid":"GO:0102318"}


id: GO:0009033
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + trimethylamine-N-oxide = NAD+ + trimethylamine + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylamine-N-oxide reductase activity (obsolete GO:0009033)","synonyms":[{"name":"NADH:trimethylamine-N-oxide oxidoreductase","type":"exact"},{"name":"trimethylamine N-oxide reductase","type":"exact"},{"name":"trimethylamine oxidase activity","type":"exact"},{"name":"trimethylamine oxide reductase","type":"exact"}],"termid":"GO:0009033"}


id: MONDO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"basal encephalocele","secondary_identifiers":["UMLS:C4023176","MEDGEN:868771","Orphanet:268829","GARD:20971","icd11.foundation:533416539"],"termid":"MONDO:0017082","xrefs":{"Monarch":{"xref_id":"0017082"}}}


id: PBO:0049180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gremlin 1, DAN family BMP antagonist","termid":"PBO:0049180"}


id: PBO:0054372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1766","termid":"PBO:0054372"}


id: GO:0048194
data:
  {"annotated_genes":["SJAG_04391","SJAG_03268","SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77972],"is_not":false,"summary":null,"term":"GO:0048194"},{"annotations":[71644,118043],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The evagination of the Golgi membrane, resulting in formation of a vesicle.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01516":null,"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle budding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi-derived vesicle budding","type":"exact"},{"name":"dictyosome vesicle budding","type":"narrow"}],"termid":"GO:0048194","terms_by_termid":{"GO:0048194":null,"GO:0048205":null}}


id: PBO:0087635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; required for ribosomal small subunit export from nucleus; required for growth at low temperature","termid":"PBO:0087635"}


id: PBO:0017692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1 (predicted)","termid":"PBO:0017692"}


id: PBO:0082356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with paralog, ALK2, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of cell polarity factors in mitosis, proper localization of formins and polarity factors, and survival in cells that activate spindle assembly checkpoint; regulates the morphogenesis checkpoint in response to polarity insults through inactivation of Mih1p; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0082356"}


id: PBO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLNB antisense RNA 1","termid":"PBO:0047679"}


id: GO:2000270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of fibroblast apoptotic process","termid":"GO:2000269"},{"relation_name":"negatively_regulates","term_name":"fibroblast apoptotic process","termid":"GO:0044346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast apoptotic process","synonyms":[{"name":"negative regulation of fibroblast apoptosis","type":"narrow"}],"termid":"GO:2000270"}


id: PBO:0038553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 8","termid":"PBO:0038553"}


id: PBO:0028427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_fluoride","termid":"PBO:0028427"}


id: GO:0120318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The use of external chemical cues called pheromones to send social and sexual information between members of the same species, leading to specific behavioral responses. Pheromones may be detected by two olfactory sensory circuits, the main olfactory pathway and the vomeronasal system.","definition_xrefs":["GOC:krc","PMID:17935991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory sociosexual communication","termid":"GO:0120318"}


id: MONDO:1010663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune thrombocytopenic purpura that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenic purpura, non-human animal","termid":"MONDO:1010081"},{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, dog","termid":"MONDO:1010625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thrombocytopenic purpura, dog","secondary_identifiers":["OMIA:001104-9615"],"termid":"MONDO:1010663","xrefs":{"Monarch":{"xref_id":"1010663"}}}


id: GO:0007109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of finishing cell separation, which results in two physically separated cells.","definition_xrefs":["GOC:dph","GOC:tb","GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis, completion of separation (obsolete GO:0007109)","synonyms":[{"name":"completion of separation involved in cytokinesis","type":"exact"},{"name":"cytokinesis, completion of separation","type":"exact"}],"termid":"GO:0007109"}


id: PBO:0090468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and protein import chaperone Mge1","termid":"PBO:0090468"}


id: PBO:0068779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 16, pseudogene","termid":"PBO:0068779"}


id: PBO:0054496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1896","termid":"PBO:0054496"}


id: PBO:0028373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028373"}


id: GO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"},{"relation_name":"part_of","term_name":"posterior lateral line nerve development","termid":"GO:0048918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell differentiation","termid":"GO:0048931"}


id: PBO:0077217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 16 homolog","termid":"PBO:0077217"}


id: PATO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000398 vigorous (obsolete PATO:0000398)","termid":"PATO:0000398"}


id: GO:0003376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by sphingosine-1-phosphate binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:14592418","PMID:22001186","GOC:ascb_2009","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sphingosine-1-phosphate receptor signaling pathway","secondary_identifiers":["GO:0001789"],"synonyms":[{"name":"S1P receptor signaling pathway","type":"exact"},{"name":"S1P signaling pathway","type":"related"},{"name":"S1P-activated G-protein coupled receptor signaling pathway","type":"exact"},{"name":"S1P-activated GPCR signaling pathway","type":"exact"},{"name":"S1P-stimulated signal transduction pathway","type":"exact"},{"name":"sphingolipid signaling pathway","type":"broad"},{"name":"sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003376"}


id: FYPO:0008110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which posttranscriptional addition of a methyl group to the 2'-oxygen atom of the adenine residue at position 64 in an U6 snRNA molecule is decreased.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"decreased U6 2'-O-snRNA methylation at residue A64","termid":"FYPO:0008110"}


id: GO:0015739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sialic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sialic acid transport","termid":"GO:0015739"}


id: MONDO:0003552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosquamous gallbladder carcinoma (obsolete MONDO:0003552)","termid":"MONDO:0003552","xrefs":{"Monarch":{"xref_id":"0003552"}}}


id: PBO:0057112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200a","termid":"PBO:0057112"}


id: PBO:0029168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dTDP_level","termid":"PBO:0029168"}


id: PR:Q9P6R2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6R2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13E7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.08c","synonyms":[{"name":"Spom972h-leo1","type":"exact"}],"termid":"PR:Q9P6R2"}


id: GO:1902439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vanadate(3-) stimulus.","definition_xrefs":["PMID:7489911","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to vanadate(3-)","termid":"GO:1902438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vanadate(3-)","termid":"GO:1902439"}


id: PBO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 1","termid":"PBO:0047556"}


id: GO:0032609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"type II interferon production","secondary_identifiers":["GO:0042095","GO:0072643"],"synonyms":[{"name":"IFNG production","type":"exact"},{"name":"interferon-gamma biosynthetic process","type":"narrow"},{"name":"interferon-gamma production","type":"exact"},{"name":"interferon-gamma secretion","type":"narrow"},{"name":"type II IFN production","type":"exact"}],"termid":"GO:0032609"}


id: GO:1904140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:19100238","GOC:nc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell migration","synonyms":[{"name":"down regulation of microglial cell migration","type":"exact"},{"name":"down-regulation of microglial cell migration","type":"exact"},{"name":"downregulation of microglial cell migration","type":"exact"},{"name":"inhibition of microglial cell migration","type":"narrow"}],"termid":"GO:1904140"}


id: MONDO:0009629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Desbuquois dysplasia in which the cause of the disease is a mutation in the CANT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Desbuquois dysplasia","termid":"MONDO:0015426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Desbuquois dysplasia 1","secondary_identifiers":["UMLS:C4012146","MEDGEN:860583","OMIM:251450","GARD:16451"],"synonyms":[{"name":"CANT1 Desbuquois dysplasia","type":"exact"},{"name":"DBQD1","type":"related"},{"name":"Desbuquois dysplasia 1","type":"exact"},{"name":"Desbuquois dysplasia caused by mutation in CANT1","type":"exact"},{"name":"Desbuquois dysplasia type 1","type":"exact"},{"name":"Desbuquois dysplasia, Kim variant","type":"related"},{"name":"desbuquois syndrome","type":"related"},{"name":"micromelic dwarfism with vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"related"}],"termid":"MONDO:0009629","xrefs":{"Monarch":{"xref_id":"0009629"}}}


id: GO:0140472
data:
  {"annotated_genes":["SJAG_03126","SJAG_03705","SJAG_03379","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101246,111063,112253,118199],"is_not":false,"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane at the cell tip at which no growth takes place.","definition_xrefs":["PMID:17895368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex of cell tip","termid":"GO:0051285"},{"relation_name":"part_of","term_name":"non-growing cell tip","termid":"GO:0035839"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02838":null,"SJAG_03126":null,"SJAG_03379":null,"SJAG_03705":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cell cortex of non-growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140472","terms_by_termid":{"GO:0140472":null}}


id: PBO:0090900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane basic amino acid transmembrane transporter","termid":"PBO:0090900"}


id: GO:0097277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular urea homeostasis (obsolete GO:0097277)","termid":"GO:0097277"}


id: PBO:0055655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3095","termid":"PBO:0055655"}


id: GO:0016925
data:
  {"annotated_genes":["SJAG_02503","SJAG_03843","SJAG_01776","SJAG_00727","SJAG_02082","SJAG_00604","SJAG_05032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72730,72840,75798,75952,76186,98085,114951],"is_not":false,"summary":null,"term":"GO:0016925"}]},"cv_name":"biological_process","definition":"The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["PMID:11265250","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03843":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein sumoylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2990846","GO:0019947","GO:0016927","Wikipedia:SUMO_protein","GO:0019951","GO:0006485"],"synonyms":[{"name":"SUMO-protein conjugation","type":"exact"},{"name":"Smt3-protein conjugation","type":"related"},{"name":"Smt3p-protein conjugation","type":"related"},{"name":"protein sumolation","type":"exact"},{"name":"small ubiquitin-related protein 1 conjugation","type":"exact"},{"name":"sumoylation","type":"exact"}],"termid":"GO:0016925","terms_by_termid":{"GO:0016925":null}}


id: MONDO:0015172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. This syndrome is characterized by the association of severe congenital colitis with sensorineural deafness.","definition_xrefs":["Orphanet:103912"],"gene_count":0,"genotype_count":0,"name":"obsolete epithelio-exfoliative colitis-deafness syndrome (obsolete MONDO:0015172)","termid":"MONDO:0015172","xrefs":{"Monarch":{"xref_id":"0015172"}}}


id: SO:0001993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic positions associated with cis-splicing. Contains the first and second positions immediately before the exon and the first, second and fifth positions immediately after.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_cis_splice_site","synonyms":[{"name":"extended cis splice site","type":"exact"}],"termid":"SO:0001993"}


id: GO:0003848
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69313],"is_not":false,"summary":null,"term":"GO:0003848"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate + AMP + 2 H+.","definition_xrefs":["RHEA:11412","EC:2.7.6.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:H2PTERIDINEPYROPHOSPHOKIN-RXN","KEGG_REACTION:R03503"],"synonyms":[{"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase activity","type":"exact"},{"name":"6-hydroxymethyl-7,8-dihydropterin diphosphokinase activity","type":"related"},{"name":"6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin diphosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydroxymethylpterin-pyrophosphokinase activity","type":"related"},{"name":"ATP:2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine 6'-diphosphotransferase activity","type":"related"},{"name":"H2-pteridine-CH2OH pyrophosphokinase activity","type":"related"},{"name":"HPPK","type":"related"},{"name":"hydroxymethyldihydropteridine pyrophosphokinase activity","type":"related"}],"termid":"GO:0003848","terms_by_termid":{"GO:0003848":null}}


id: PBO:0027561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_DNA_double-strand_break_formation_at_silent_mating-type_cassette","termid":"PBO:0027561"}


id: GO:0043127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of the enzyme 1-phosphatidylinositol 4-kinase.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol 4-kinase activity (obsolete GO:0043127)","synonyms":[{"name":"down regulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"down-regulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"downregulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"inhibition of 1-phosphatidylinositol 4-kinase activity","type":"narrow"},{"name":"negative regulation of PI4K activity","type":"exact"}],"termid":"GO:0043127"}


id: MONDO:0100276
data:
  {"annotated_genes":["SJAG_02384","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85884,85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013726"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of peroxisome and mitochondrial fission.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal disease","termid":"MONDO:0019053"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"disorder of defective peroxisomal and mitochondrial fission","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"disorder of defective peroxisomal and mitochondrial fission","type":"exact"},{"name":"peroxisome and mitochronrial fission disease","type":"exact"}],"termid":"MONDO:0100276","terms_by_termid":{"MONDO:0013726":null},"xrefs":{"Monarch":{"xref_id":"0100276"}}}


id: FYPO:0003132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a gene product is normally localized to discrete regions in the nucleus (i.e. its localization is indistinguishable from wild type), visible as foci or dots by microscopy, during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal punctate nuclear localization during cellular response to ionizing radiation","synonyms":[{"name":"normal punctate nuclear localisation during cellular response to ionising radiation","type":"related"},{"name":"normal punctate nuclear localization during cellular response to IR","type":"exact"},{"name":"normal punctate nuclear localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal punctate nuclear localization during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003132"}


id: PBO:0059590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 2","termid":"PBO:0059590"}


id: PBO:0071124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 126","termid":"PBO:0071124"}


id: GO:0046127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside catabolic process","termid":"GO:0046121"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside degradation","type":"exact"}],"termid":"GO:0046127"}


id: PATO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's having color.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colored","secondary_identifiers":["PATO:0000332"],"synonyms":[{"name":"pigmented","type":"related"}],"termid":"PATO:0000336"}


id: PBO:0012314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGG1 interacting factor 3 family, implicated in transcription","termid":"PBO:0012314"}


id: MONDO:0012437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the MAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 21 multiple types","secondary_identifiers":["DOID:0110256","MESH:C565703","MEDGEN:347538","OMIM:610202","UMLS:C1857768"],"synonyms":[{"name":"CCA4","type":"narrow"},{"name":"CTRCT21","type":"exact"},{"name":"MAF early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 21 multiple types with or without microcornea","type":"exact"},{"name":"cataract 21, multiple types","type":"related"},{"name":"cataract 21, multiple types, with or without microcornea","type":"related"},{"name":"cataract, congenital, cerulean type, 4","type":"related"},{"name":"cataract, pulverulent, juvenile-onset","type":"related"},{"name":"congenital cataract cerulean type 4","type":"narrow"},{"name":"early-onset non-syndromic cataract caused by mutation in MAF","type":"exact"}],"termid":"MONDO:0012437","xrefs":{"Monarch":{"xref_id":"0012437"}}}


id: PBO:0042325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule","termid":"PBO:0042325"}


id: GO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"negatively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cortisol secretion","synonyms":[{"name":"down regulation of cortisol secretion","type":"exact"},{"name":"down-regulation of cortisol secretion","type":"exact"},{"name":"downregulation of cortisol secretion","type":"exact"},{"name":"inhibition of cortisol secretion","type":"narrow"}],"termid":"GO:0051463"}


id: PBO:0090865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt2","termid":"PBO:0090865"}


id: GO:0009805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coumarins, a class of compounds derived from the phenylacrylic skeleton of cinnamic acids.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"coumarin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5176"],"synonyms":[{"name":"coumarin anabolism","type":"exact"},{"name":"coumarin biosynthesis","type":"exact"},{"name":"coumarin formation","type":"exact"},{"name":"coumarin synthesis","type":"exact"}],"termid":"GO:0009805"}


id: FYECO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing galactose as the carbon source, yeast extract and other components. The concentration of galactose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose YE","synonyms":[{"name":"galactose rich medium","type":"broad"}],"termid":"FYECO:0000432"}


id: PR:Q9UTJ3-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTJ3-2.","definition_xrefs":["UniProtKB:Q9UTJ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTJ3"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 1/2 isoform meu1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTJ3-2"],"synonyms":[{"name":"Spom972h-meu1-1/iso:meu1-2","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform SPAC1556.06.2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform SPAC1556.06b (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform meu2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTJ3-2"}


id: PBO:0117040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AOPEP antisense RNA 1","termid":"PBO:0117040"}


id: MONDO:0008251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare chronic papulosquamous disorder of unknown etiology characterized by small follicular papules, scaly red-orange patches, and palmoplantar hyperkeratosis, which may progress to plaques or erythroderma. Although most of the cases are sporadic and acquired, a familial form of the disease exists.","definition_xrefs":["Orphanet:2897"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"excluded_subClassOf","term_name":"exanthem","termid":"MONDO:0006547"},{"relation_name":"excluded_subClassOf","term_name":"erythrokeratoderma","termid":"MONDO:0019270"},{"relation_name":"is_a","term_name":"pityriasis rubra pilaris","termid":"MONDO:0100017"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial pityriasis rubra pilaris","secondary_identifiers":["MESH:C531784","OMIM:173200","UMLS:C2930842","MedDRA:10035116","MEDGEN:443914","ICD9:696.4"],"synonyms":[{"name":"Devergie's disease","type":"exact"},{"name":"PRP","type":"exact"},{"name":"hereditary pityriasis rubra pilaris","type":"exact"},{"name":"pityriasis rubra pilaris","type":"broad"},{"name":"pityriasis rubra pilaris--familial type","type":"exact"}],"termid":"MONDO:0008251","xrefs":{"Monarch":{"xref_id":"0008251"}}}


id: PBO:0057549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 663b","termid":"PBO:0057549"}


id: MONDO:0020161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion","termid":"MONDO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital ectropion","secondary_identifiers":["GARD:19502","icd11.foundation:945558601","SCTID:26590002","ICD10CM:Q10.1","UMLS:C0266578","MEDGEN:540010","Orphanet:98570"],"termid":"MONDO:0020161","xrefs":{"Monarch":{"xref_id":"0020161"}}}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: PBO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B","termid":"PBO:0039714"}


id: PBO:0040672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31","termid":"PBO:0040672"}


id: MONDO:0009000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial reactive perforating collagenosis is a very rare genetic skin disease characterized by transepidermal elimination of collagen fibers presenting as recurrent spontaneously involuting keratotic papules or nodules.","definition_xrefs":["Orphanet:79147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial reactive perforating collagenosis","secondary_identifiers":["MEDGEN:347504","GARD:13331","UMLS:C1857624","OMIM:216700","icd11.foundation:563155724","MESH:C565687"],"synonyms":[{"name":"RPC","type":"related"},{"name":"collagenosis, familial reactive perforating","type":"related"},{"name":"inherited reactive perforating collagenosis","type":"related"}],"termid":"MONDO:0009000","xrefs":{"Monarch":{"xref_id":"0009000"}}}


id: GO:2000171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendrite development","termid":"GO:2000171"}


id: PBO:0043549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type III alpha 1 chain","termid":"PBO:0043549"}


id: PBO:0057689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1278","termid":"PBO:0057689"}


id: GO:0004768
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75517],"is_not":false,"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 + octadecanoyl-CoA = (9Z)-octadecenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:19721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"stearoyl-CoA 9-desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8847579","EC:1.14.19.1","GO:0043735","MetaCyc:1.14.19.1-RXN","GO:0016214","Reactome:R-HSA-5690565"],"synonyms":[{"name":"acyl-CoA desaturase","type":"broad"},{"name":"delta(9)-desaturase activity","type":"broad"},{"name":"delta9-desaturase","type":"broad"},{"name":"fatty acid desaturase","type":"broad"},{"name":"stearoyl-CoA desaturase activity","type":"broad"}],"termid":"GO:0004768","terms_by_termid":{"GO:0004768":null}}


id: PBO:0065272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR34 long non-coding RNA","termid":"PBO:0065272"}


id: PBO:0073242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 7","termid":"PBO:0073242"}


id: MOD:00029
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-valine.","definition_xrefs":["DeltaMass:0","RESID:AA0020","ChEBI:30015","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine residue","synonyms":[{"name":"(2S)-2-amino-3-methylbutanoic acid","type":"exact"},{"name":"2-azanyl-3-methylbutanoic acid","type":"exact"},{"name":"L-valine","type":"exact"},{"name":"Val","type":"exact"},{"name":"alpha-amino-beta-methylbutyric acid","type":"exact"},{"name":"alpha-aminoisovaleric acid","type":"exact"}],"termid":"MOD:00029"}


id: MONDO:0021651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A joint presentation of syndactyly (fusion of digits) and polydactyly (production of supernumerary digits).","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synpolydactyly","secondary_identifiers":["Orphanet:93403","MESH:C538153","NCIT:C125597","UMLS:C2699746","MEDGEN:437845","SCTID:715724002","GARD:5087","NCIT:C75003","SCTID:84598000"],"synonyms":[{"name":"SPD","type":"related"},{"name":"polysyndactyly","type":"exact"},{"name":"syndactyly type 2","type":"exact"},{"name":"synpolydactyly","type":"exact"}],"termid":"MONDO:0021651","xrefs":{"Monarch":{"xref_id":"0021651"}}}


id: PBO:0052965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1CAM antisense RNA 1","termid":"PBO:0052965"}


id: GO:0141053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2A substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004842","GO:0003824","GO:0019787","GO:0140096","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}


id: GO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactose from one side of a membrane to the other. Lactose is a disaccharide 4-O-beta-D-galactopyranosyl-D-glucose, and constitutes roughly 5% of the milk in almost all mammals.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lactose transmembrane transporter activity","secondary_identifiers":["GO:0019189"],"synonyms":[{"name":"lactose permease activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0015155"}


id: GO:0004637
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71013],"is_not":false,"summary":null,"term":"GO:0004637"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.13","RHEA:17453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYRIBONUCSYN-RXN","KEGG_REACTION:R04144","Reactome:R-HSA-73814"],"synonyms":[{"name":"2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"5-phospho-D-ribosylamine:glycine ligase (ADP-forming)","type":"related"},{"name":"GAR","type":"related"},{"name":"GAR synthetase activity","type":"related"},{"name":"GARS activity","type":"related"},{"name":"glycinamide ribonucleotide synthetase activity","type":"related"},{"name":"glycineamide ribonucleotide synthetase activity","type":"related"},{"name":"phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"phosphoribosylglycineamide synthetase activity","type":"related"}],"termid":"GO:0004637","terms_by_termid":{"GO:0004637":null}}


id: MONDO:0011107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndrome characterized by sparse and short hair from birth followed by progressive macular degeneration leading to blindness.","definition_xrefs":["Orphanet:1573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital hypotrichosis with juvenile macular dystrophy","secondary_identifiers":["MESH:C537698","OMIM:601553","UMLS:C1832162","MEDGEN:316921","DOID:0110711","GARD:3066"],"synonyms":[{"name":"HJMD","type":"exact"},{"name":"Hjmd","type":"exact"},{"name":"hypotrichosis with cone-rod dystrophy","type":"exact"},{"name":"hypotrichosis with juvenile macular degeneration","type":"related"},{"name":"hypotrichosis with juvenile macular dystrophy","type":"exact"},{"name":"hypotrichosis, congenital, with juvenile macular dystrophy","type":"related"},{"name":"juvenile macular degeneration and hypotrichosis","type":"related"},{"name":"juvenile macular dystrophy and congenital hypotrichosis","type":"related"}],"termid":"MONDO:0011107","xrefs":{"Monarch":{"xref_id":"0011107"}}}


id: MONDO:0030895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 22","secondary_identifiers":["MEDGEN:1745920","OMIM:619155","UMLS:C5436909","DOID:0112268","GARD:16428"],"synonyms":[{"name":"NPHS22","type":"exact"},{"name":"nephrotic syndrome, type 22","type":"exact"}],"termid":"MONDO:0030895","xrefs":{"Monarch":{"xref_id":"0030895"}}}


id: FYPO:0004843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and more than one septum, and the septa are grouped together between two compartments, one contains both nuclei.","definition_xrefs":["PMID:25203555","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"multiseptate vegetative cell with binucleate and anucleate compartments","synonyms":[{"name":"multiseptate cell with binucleate and anucleate compartments during vegetative growth","type":"exact"},{"name":"multiseptate vegetative cell with binucleate and anucleate compartments during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004843"}


id: PBO:0054167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1538","termid":"PBO:0054167"}


id: GO:0102156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,5-dihydroxybenzoate + UDP-alpha-D-glucose = 2,5-dihydroxybenzoate 5-O-beta-D-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-DHBA UDP-glucosyltransferase activity (obsolete GO:0102156)","termid":"GO:0102156"}


id: PBO:0108937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 16","termid":"PBO:0108937"}


id: GO:2000993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of galactomannan catabolic process","termid":"GO:2000991"},{"relation_name":"positively_regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of galactomannan catabolic process","termid":"GO:2000993"}


id: PR:P36623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.06","secondary_identifiers":["UniProtKB:P36623"],"synonyms":[{"name":"BPG-dependent PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoglyceromutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.06","type":"related"},{"name":"Spom972h-gpmA","type":"exact"}],"termid":"PR:P36623"}


id: GO:0004140
data:
  {"annotated_genes":["SJAG_05277","SJAG_04288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71483,71965],"is_not":false,"summary":null,"term":"GO:0004140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-dephospho-CoA + ATP = ADP + CoA + 2 H+.","definition_xrefs":["RHEA:18245","EC:2.7.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04288":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dephospho-CoA kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00130","MetaCyc:DEPHOSPHOCOAKIN-RXN","Reactome:R-HSA-196773","Reactome:R-HSA-9837337"],"synonyms":[{"name":"3'-dephospho-CoA kinase activity","type":"related"},{"name":"ATP:dephospho-CoA 3'-phosphotransferase activity","type":"related"},{"name":"dephosphocoenzyme A kinase (phosphorylating)","type":"related"},{"name":"dephosphocoenzyme A kinase activity","type":"related"}],"termid":"GO:0004140","terms_by_termid":{"GO:0004140":null}}


id: PR:Q9UR06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmf2 gene.","definition_xrefs":["UniProtKB:Q9UR06","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mmf2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.10","synonyms":[{"name":"Spom972h-mmf2","type":"exact"},{"name":"maintenance of mitochondrial function 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR06"}


id: MONDO:0006386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, serous adenocarcinoma that diffusely involves the pelvic peritoneum seen predominantly in elderly postmenopausal women. Exclusion of serous carcinoma arising from the ovary and fimbrial end of fallopian tube is required to diagnose the above entity.","definition_xrefs":["doi:10.4103/2278-0513.157944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal serous adenocarcinoma","termid":"MONDO:0003195"},{"relation_name":"is_a","term_name":"primary peritoneal carcinoma","termid":"MONDO:0015686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary peritoneal serous adenocarcinoma","secondary_identifiers":["MEDGEN:269517","EFO:1000494","NCIT:C40023","UMLS:C1514429"],"synonyms":[{"name":"primary peritoneal serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0006386","xrefs":{"Monarch":{"xref_id":"0006386"}}}


id: SO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an mRNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_region","synonyms":[{"name":"mRNA region","type":"exact"}],"termid":"SO:0000836"}


id: GO:1901216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of neuron death (obsolete GO:1901216)","synonyms":[{"name":"activation of neuron cell death","type":"narrow"},{"name":"activation of neuron death","type":"narrow"},{"name":"activation of neuronal cell death","type":"narrow"},{"name":"positive regulation of neuron cell death","type":"exact"},{"name":"positive regulation of neuronal cell death","type":"exact"},{"name":"up regulation of neuron cell death","type":"exact"},{"name":"up regulation of neuron death","type":"exact"},{"name":"up regulation of neuronal cell death","type":"exact"},{"name":"up-regulation of neuron cell death","type":"exact"},{"name":"up-regulation of neuron death","type":"exact"},{"name":"up-regulation of neuronal cell death","type":"exact"},{"name":"upregulation of neuron cell death","type":"exact"},{"name":"upregulation of neuron death","type":"exact"},{"name":"upregulation of neuronal cell death","type":"exact"}],"termid":"GO:1901216"}


id: MONDO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adverse functional, metabolic, or structural changes in ischemic tissues resulting from the restoration of blood flow to the tissue (reperfusion), including swelling; hemorrhage; necrosis; and damage from free radicals. The most common instance is myocardial reperfusion injury.","definition_xrefs":["MESH:D015427"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ischemia reperfusion injury","secondary_identifiers":["PMID:10685060","EFO:0002687"],"termid":"MONDO:0005203","xrefs":{"Monarch":{"xref_id":"0005203"}}}


id: PBO:0015684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derivation, Eighteen Interacting Centromere protein","termid":"PBO:0015684"}


id: MONDO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hair follicle neoplasm","termid":"MONDO:0003413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"follicular infundibulum tumor","secondary_identifiers":["DOID:8426","ICD9:239.2","NCIT:C4469","SCTID:254694002","MEDGEN:138031","UMLS:C0346006"],"synonyms":[{"name":"basal cell hamartoma with follicular differentiation","type":"exact"},{"name":"follicular infundibulum neoplasm","type":"exact"},{"name":"neoplasm of the follicular infundibulum","type":"exact"},{"name":"tumor of follicular infundibulum","type":"exact"},{"name":"tumor of the follicular infundibulum","type":"exact"},{"name":"tumour of follicular infundibulum","type":"exact"},{"name":"tumour of the follicular infundibulum","type":"exact"}],"termid":"MONDO:0004560","xrefs":{"Monarch":{"xref_id":"0004560"}}}


id: PBO:0064520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit A","termid":"PBO:0064520"}


id: MONDO:1012079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fibrodysplasia ossificans, non-human animal","termid":"MONDO:1011789"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrodysplasia ossificans, domestic cat","secondary_identifiers":["OMIA:000388-9685"],"termid":"MONDO:1012079","xrefs":{"Monarch":{"xref_id":"1012079"}}}


id: GO:1905074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["PMID:18718461","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of tight junction disassembly","termid":"GO:1905073"},{"relation_name":"negatively_regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tight junction disassembly","synonyms":[{"name":"down regulation of occluding cell junction disassembly","type":"exact"},{"name":"down regulation of tight junction disassembly","type":"exact"},{"name":"down-regulation of occluding cell junction disassembly","type":"exact"},{"name":"down-regulation of tight junction disassembly","type":"exact"},{"name":"downregulation of occluding cell junction disassembly","type":"exact"},{"name":"downregulation of occluding junction disassembly","type":"exact"},{"name":"downregulation of tight junction disassembly","type":"exact"},{"name":"inhibition of occluding cell junction disassembly","type":"narrow"},{"name":"inhibition of occluding junction disassembly","type":"narrow"},{"name":"inhibition of tight junction disassembly","type":"narrow"},{"name":"negative regulation of occluding cell junction disassembly","type":"exact"}],"termid":"GO:1905074"}


id: PBO:0089834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L33","termid":"PBO:0089834"}


id: PBO:0042182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 2","termid":"PBO:0042182"}


id: PBO:0052611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRBOX1 antisense RNA 1","termid":"PBO:0052611"}


id: PBO:0041586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 1","termid":"PBO:0041586"}


id: GO:1901841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of high voltage-gated calcium channel activity.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:12754254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of high voltage-gated calcium channel activity","synonyms":[{"name":"regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"regulation of high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:1901841"}


id: PBO:0056470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase like","termid":"PBO:0056470"}


id: PBO:0048914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member I, pseudogene","termid":"PBO:0048914"}


id: GO:0071731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitric oxide","termid":"GO:0071731"}


id: GO:0031555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A negative regulation of gene expression mechanism by which bacteria and archae can direct RNA polymerase to prematurely terminate transcription in response to a specific metabolic signal.","definition_xrefs":["PMID:7007895","PMID:15851059","PMID:12210530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"positive regulation of termination of DNA-templated transcription","termid":"GO:0060566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"transcriptional attenuation","secondary_identifiers":["Wikipedia:Attenuator_(genetics)"],"termid":"GO:0031555"}


id: PBO:0032754
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gap for YPt","termid":"PBO:0032754"}


id: PBO:0073540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 2","termid":"PBO:0073540"}


id: MONDO:0009530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipoid proteinosis (LP) is a rare genodermatosis characterized clinically by mucocutaneous lesions, hoarseness developing in early childhood and, at times, neurological complications.","definition_xrefs":["Orphanet:530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0002525"],"is_obsolete":false,"name":"lipoid proteinosis","secondary_identifiers":["icd11.foundation:326368380","SCTID:38692000","ICD9:272.8","GARD:3268","DOID:14498","NANDO:2200608","MEDGEN:6112","MESH:D008065","NCIT:C84829","UMLS:C0023795","OMIM:247100"],"synonyms":[{"name":"Urbach Wiethe disease","type":"related"},{"name":"Urbach-Wiethe disease","type":"exact"},{"name":"hyalinosis cutis Et mucosae","type":"related"},{"name":"hyalinosis cutis et mucosae","type":"exact"},{"name":"lipid proteinosis","type":"exact"},{"name":"lipoid proteinosis","type":"exact"},{"name":"lipoid proteinosis of Urbach and Wiethe","type":"related"},{"name":"lipoproteinosis","type":"exact"}],"termid":"MONDO:0009530","xrefs":{"Monarch":{"xref_id":"0009530"}}}


id: PR:O94645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymocyte nuclear protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03612","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.03c","secondary_identifiers":["UniProtKB:O94645"],"synonyms":[{"name":"Spom972h-THYN1","type":"exact"}],"termid":"PR:O94645"}


id: MONDO:0800038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTND1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTND1","synonyms":[{"name":"MTND1 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800038","xrefs":{"Monarch":{"xref_id":"0800038"}}}


id: PBO:0086397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytosolic protein of unknown function","termid":"PBO:0086397"}


id: GO:0090545
data:
  {"annotated_genes":["SJAG_02778","SJAG_03844","SJAG_03982","SJAG_00934"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113597,72001,108471,112412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains a subunit from the CHD(Chromodomain helicase DNA-binding) family. The CHD family is characterized by two signature sequence motifs: tandem chromodomains located in the N-terminal region, and the SNF2-like ATPase domain located in the central region of the protein structure.","definition_xrefs":["GOC:tb","PMID:17350655","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"CHD-type complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090545","terms_by_termid":{"GO:0070824":null}}


id: PR:O42925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16C6.01c gene.","definition_xrefs":["UniProtKB:O42925","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.01c","synonyms":[{"name":"Spom972h-SPBC16C6.01c","type":"exact"}],"termid":"PR:O42925"}


id: GO:0097045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the surface of activated blood platelets, and triggers the clotting system.","definition_xrefs":["GOC:bf","GOC:lf","PMID:21107324","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"phosphatidylserine exposure on blood platelet","termid":"GO:0097045"}


id: PBO:0089624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster exporter Atm1","termid":"PBO:0089624"}


id: PBO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 3","termid":"PBO:0060204"}


id: MONDO:0006864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, inflammatory, variably ulcerated, occasionally bilateral, self-healing lesion of the minor salivary glands that is often confused clinically and histologically with carcinoma.","definition_xrefs":["MESH:D012797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing sialometaplasia","secondary_identifiers":["MedDRA:10072176","ICD9:527.8","MEDGEN:48659","DOID:12901","SCTID:109769000","UMLS:C0037033"],"termid":"MONDO:0006864","xrefs":{"Monarch":{"xref_id":"0006864"}}}


id: GO:0021849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the subventricular zone of the forebrain. The interneuron precursors that these cells give rise to include adult olfactory bulb interneurons and migrate tangentially.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:12626695","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in subventricular zone","termid":"GO:0021849"}


id: GO:0033097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an amyloplast and form the amyloplast envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"amyloplast envelope","termid":"GO:0033096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast membrane","termid":"GO:0033097"}


id: PBO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in transport","termid":"PBO:0005457"}


id: PBO:0053217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 14","termid":"PBO:0053217"}


id: GO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptide with hormonal activity in animals.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"peptide hormone binding","synonyms":[{"name":"polypeptide hormone binding","type":"exact"}],"termid":"GO:0017046"}


id: PR:Q09737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc202 gene.","definition_xrefs":["UniProtKB:Q09737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C13A11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.06","synonyms":[{"name":"Spom972h-pdc202","type":"exact"}],"termid":"PR:Q09737"}


id: FYPO:0008194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Trolox (antioxidant). Cells stop growing (and may die) at a concentration of Trolox that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to trolox","termid":"FYPO:0008194"}


id: RO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a is attached to b if and only if a and b are discrete objects or object parts, and there are physical connections between a and b such that a force pulling a will move b, or a force pulling b will move a","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"},{"relation_name":"is_a","term_name":"attached_to_part_of","termid":"RO:0002177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attached_to","termid":"RO:0002371"}


id: MONDO:0859136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Alzahrani-Kuwahara syndrome","secondary_identifiers":["OMIM:619268","MEDGEN:1782127","UMLS:C5543274","GARD:18544"],"termid":"MONDO:0859136","xrefs":{"Monarch":{"xref_id":"0859136"}}}


id: PBO:0004802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM-associated protein Mcm10","termid":"PBO:0004802"}


id: PBO:0050924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 7","termid":"PBO:0050924"}


id: PBO:0080799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 5","termid":"PBO:0080799"}


id: PBO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Pom2","termid":"PBO:0000601"}


id: GO:0050493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-threonyl ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a threonyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0164"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-threonyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0050493)","termid":"GO:0050493"}


id: PBO:0016561
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Giardia lamblia single peptide cis-prenyltransferase","termid":"PBO:0016561"}


id: GO:0019504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.","definition_xrefs":["PMID:10689197","PMID:24520058","PMID:1804402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"L-proline betaine metabolic process","termid":"GO:0019502"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-proline betaine catabolic process","secondary_identifiers":["MetaCyc:P561-PWY"],"synonyms":[{"name":"stachydrine breakdown","type":"exact"},{"name":"stachydrine catabolic process","type":"exact"},{"name":"stachydrine catabolism","type":"exact"},{"name":"stachydrine degradation","type":"exact"}],"termid":"GO:0019504"}


id: PBO:0082556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centromeric CDEIII region binding protein; nucleates kinetochore assembly; required for the structural integrity of elongating spindles; copurifies with subunits of the MIND complex and centromeric nucleosome components (Cse4p and histones H2A, H2B, and H4); phosphorylated by Ipl1p; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-C and fission yeast cnp3; localizes to the kinetochore","termid":"PBO:0082556"}


id: MONDO:0968980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 12","secondary_identifiers":["UMLS:C5935610","MEDGEN:1856162","OMIM:620792"],"termid":"MONDO:0968980","xrefs":{"Monarch":{"xref_id":"0968980"}}}


id: GO:2000177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neural precursor cell proliferation.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"neural precursor cell proliferation","termid":"GO:0061351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"}


id: MONDO:0022380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by acute lymphoblastic leukemia with the presence of congenital sporadic aniridia, the absence of an iris, where neither parent has aniridia.","definition_xrefs":["PMID:2735788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute lymphoblastic leukemia congenital sporadic aniridia","termid":"MONDO:0022380","xrefs":{"Monarch":{"xref_id":"0022380"}}}


id: PBO:0052782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19 pseudogene 6","termid":"PBO:0052782"}


id: PBO:0042102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 174","termid":"PBO:0042102"}


id: GO:0007428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of primary branches in the open tracheal system. These form from small groups of cells that migrate out at specific positions, organizing into tubes as they migrate. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:29844090","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary branching, open tracheal system","synonyms":[{"name":"primary tracheal branching","type":"exact"}],"termid":"GO:0007428"}


id: PBO:0047233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member E","termid":"PBO:0047233"}


id: PBO:0087024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11B; expressed at half the level of Rpl11Ap; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11B has a paralog, RPL11A, that arose from the whole genome duplication","termid":"PBO:0087024"}


id: FYPO:0006625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol phosphate level in plasma membrane","termid":"FYPO:0006222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"decreased 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"},{"name":"reduced phosphatidylinositol-4,5-bisphosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006625"}


id: PBO:0083137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity ser/thr and tyrosine protein kinase; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent protein degradation (Rcn1p and Cdc6p), inhibition of protein kinase A, transcriptional regulation, inhibition of RNA pol III, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division; MCK1 has a paralog, YGK3, that arose from the whole genome duplication","termid":"PBO:0083137"}


id: GO:0021882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph","GOC:dgh","PMID:16226447"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment (obsolete GO:0021882)","termid":"GO:0021882"}


id: GO:0009242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of colanic acid, a capsular bacterial polysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"colanic acid metabolic process","termid":"GO:0046377"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colanic acid biosynthetic process","secondary_identifiers":["MetaCyc:COLANSYN-PWY"],"synonyms":[{"name":"M antigen biosynthesis","type":"exact"},{"name":"M antigen biosynthetic process","type":"exact"},{"name":"colanic acid anabolism","type":"exact"},{"name":"colanic acid biosynthesis","type":"exact"},{"name":"colanic acid formation","type":"exact"},{"name":"colanic acid synthesis","type":"exact"}],"termid":"GO:0009242"}


id: GO:1990155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Dsc E3 ubiquitin ligase complex, an E3 ubiquitin ligase complex localized to the ER and Golgi membrane.","definition_xrefs":["PMID:23760507","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex assembly","synonyms":[{"name":"Dsc complex assembly","type":"exact"}],"termid":"GO:1990155"}


id: GO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group catabolic process (obsolete GO:0046139)","synonyms":[{"name":"coenzyme and prosthetic group breakdown","type":"exact"},{"name":"coenzyme and prosthetic group catabolic process","type":"exact"},{"name":"coenzyme and prosthetic group catabolism","type":"exact"},{"name":"coenzyme and prosthetic group degradation","type":"exact"}],"termid":"GO:0046139"}


id: GO:0060694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of cholesterol transporter activity.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cholesterol transporter activity (obsolete GO:0060694)","termid":"GO:0060694"}


id: PBO:0056772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 22, Kin17 lysine","termid":"PBO:0056772"}


id: MONDO:0006780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tick-borne septicemic disease of domestic and wild ruminants caused by ehrlichia ruminantium.","definition_xrefs":["MESH:D006357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"ehrlichiosis, non-human animal","termid":"MONDO:0700205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heartwater disease","synonyms":[{"name":"disease, heartwater","type":"related"}],"termid":"MONDO:0006780","xrefs":{"Monarch":{"xref_id":"0006780"}}}


id: PBO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.5","termid":"PBO:0000100"}


id: PBO:0082515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the NatB N-terminal acetyltransferase; NatB catalyzes acetylation of the amino-terminal methionine residues of all proteins beginning with Met-Asp or Met-Glu and of some proteins beginning with Met-Asn or Met-Met","termid":"PBO:0082515"}


id: PBO:0081882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 830","termid":"PBO:0081882"}


id: PBO:0113312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in pre-rRNA processing; associated with U3 snRNP; component of small ribosomal subunit (SSU) processome; ortholog of the human U3-55k protein","termid":"PBO:0113312"}


id: GO:0052677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-arabinitol + NADP+ = D-xylulose + NADPH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity (obsolete GO:0052677)","termid":"GO:0052677"}


id: PBO:0114073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D4","termid":"PBO:0114073"}


id: FYPO:0005281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains DNA broken into small fragments when the cell is exposed to ionizing radiation.","definition_xrefs":["PMID:1594599","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation (obsolete FYPO:0005281)","synonyms":[{"name":"elongated inviable cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated cell with fragmented DNA during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to gamma radiation","type":"narrow"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during cellular response to ionizing radiation","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005281"}


id: GO:0048299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"regulation of isotype switching to IgD isotypes","synonyms":[{"name":"regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"regulation of class switching to IgD isotypes","type":"exact"},{"name":"regulation of isotype switch recombination to IgD isotypes","type":"exact"}],"termid":"GO:0048299"}


id: PR:P87167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.02","synonyms":[{"name":"Spom972h-but2","type":"exact"}],"termid":"PR:P87167"}


id: GO:2000911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sterol import.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sterol transport","termid":"GO:0032373"},{"relation_name":"is_a","term_name":"regulation of sterol import","termid":"GO:2000909"},{"relation_name":"positively_regulates","term_name":"sterol import","termid":"GO:0035376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sterol import","synonyms":[{"name":"positive regulation of sterol influx","type":"exact"},{"name":"positive regulation of sterol uptake","type":"exact"}],"termid":"GO:2000911"}


id: FYECO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which isoleucine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ile","synonyms":[{"name":"isoleucine added","type":"exact"}],"termid":"FYECO:0000405"}


id: FYPO:0004341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed mitochondrial fission during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of mitochondrial division","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to H2O2","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial proliferation","type":"related"}],"termid":"FYPO:0004341"}


id: GO:0016038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reception of a (visible light) photon by a cell, visible light being defined as having a wavelength within the range 380-780 nm.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light absorption","termid":"GO:0016037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"absorption of visible light","termid":"GO:0016038"}


id: FYECO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which magnesium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Mg ions","synonyms":[{"name":"magnesium ions added","type":"exact"}],"termid":"FYECO:0000038"}


id: MONDO:0008720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypopituitarrium that is characterized by a decreased or absent production of adrenocorticotropic hormone by the pituitary gland.","definition_xrefs":["Wikipedia:Adrenocorticotropic_hormone_deficiency","PMID:27041067","DOID:0080150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"},{"relation_name":"is_a","term_name":"isolated congenital hypogonadotropic hypogonadism","termid":"MONDO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital isolated adrenocorticotropic hormone deficiency","secondary_identifiers":["OMIM:201400","HP:0011748","SCTID:237692001","MEDGEN:137968","UMLS:C0342388","Orphanet:199296","EFO:1001979","GARD:5727","ICD9:255.41","MESH:C535668"],"synonyms":[{"name":"ACTH deficiency, isolated","type":"related"},{"name":"IAD","type":"related"},{"name":"adrenocorticotropic hormone deficiency","type":"exact"},{"name":"congenital isolated ACTH deficiency","type":"related"},{"name":"congenital isolated adrenocorticotropic hormone deficiency (disease)","type":"exact"},{"name":"isolated ACTH deficiency","type":"related"},{"name":"isolated adrenocorticotropic hormone deficiency","type":"related"}],"termid":"MONDO:0008720","xrefs":{"Monarch":{"xref_id":"0008720"}}}


id: PBO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-3","termid":"PBO:0052874"}


id: PR:Q9Y7N0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bromodomain-containing protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex bromodomain subunit bdf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.02","secondary_identifiers":["UniProtKB:Q9Y7N0"],"synonyms":[{"name":"Spom972h-BRD3","type":"exact"}],"termid":"PR:Q9Y7N0"}


id: MONDO:0100283
data:
  {"annotated_genes":["SJAG_03067","SJAG_05346","SJAG_00991","SJAG_00289","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86966,86963,86962,86964,86965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011818"},{"annotations":[86366,86365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014716"}]},"cv_name":"mondo","definition":"A disease caused by mosaic gain-of-function (GoF) of several genes in the MTOR pathway (MTOR, PIK3CA, PIK3R2 and AKT3) are functionally the same despite significant phenotypic variability. These GoF variants result in overgrowth due to an over-activation of key genes in this pathway. The phenotypic variability is generally attributed to the mosaic fraction and affected tissue types. For example, macrocephaly is noted if the variant is identified in the brain, but non symmetric overgrowth of that limb is noted when the variant is only present in the affected limb. The pathologies of the affected tissue often reveal similar characteristics such as cellular overgrowth. However, this is not always the case especially with focal cortical dysplasia. At times the characteristics pathologies are not present in the tissue but sampling biases are an issue. FCD resections often involve a very small area and so a very small amount of tissue is available for pathology and it is not guaranteed that lesional tissue is sent. Therefore, having a single disease term which can encompass the phenotypic variability yet provide a unifying molecular diagnosis name makes sense given the common functional mechanism.","definition_xrefs":["PMID:22729223","PMID:27860216","PMID:30349109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","type":"exact"}],"termid":"MONDO:0100283","terms_by_termid":{"MONDO:0011818":null,"MONDO:0014716":null},"xrefs":{"Monarch":{"xref_id":"0100283"}}}


id: PBO:0069862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1149, pseudogene","termid":"PBO:0069862"}


id: GO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex forming the elongated portion of the radial spoke between the base which binds to the A-tubule of each microtubule outer doublet and the neck which connects to the spoke head within the ciliary or flagellum axoneme.","definition_xrefs":["GOC:hjd","GOC:krc","PMID:22754630","PMID:34871179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"radial spoke stalk","termid":"GO:0001536"}


id: PBO:0059548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Pro (CCN)","termid":"PBO:0059548"}


id: PBO:0026842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_swollen,_elongated_pear-shaped_cell","termid":"PBO:0026842"}


id: PATO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001212 length_unit (obsolete PATO:0001212)","termid":"PATO:0001212"}


id: FYPO:0001025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle progression is arrested under conditions where arrest normally occurs.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normally arrested mitotic cell cycle progression","synonyms":[{"name":"normal mitotic cell cycle arrest","type":"exact"}],"termid":"FYPO:0001025"}


id: MONDO:0024337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a urothelium.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"},{"relation_name":"is_a","term_name":"transitional cell neoplasm","termid":"MONDO:0037254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial neoplasm","secondary_identifiers":["NCIT:C39852","UMLS:C1519840","MEDGEN:275551"],"synonyms":[{"name":"neoplasm of urothelium","type":"exact"},{"name":"transitional cell neoplasm of the urinary tract","type":"exact"},{"name":"tumor of urothelium","type":"exact"},{"name":"tumour of urothelium","type":"exact"},{"name":"urothelial neoplasm","type":"exact"},{"name":"urothelium neoplasm","type":"exact"},{"name":"urothelium neoplasm (disease)","type":"exact"},{"name":"urothelium tumor","type":"exact"},{"name":"urothelium tumour","type":"exact"}],"termid":"MONDO:0024337","xrefs":{"Monarch":{"xref_id":"0024337"}}}


id: PBO:0056255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein like","termid":"PBO:0056255"}


id: PBO:0086181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ubiquinone biosynthesis and respiratory growth; localizes to matrix face of mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; ubiquinone is also known as coenzyme Q; human homolog COQ9 can complement yeast coq9 null mutant","termid":"PBO:0086181"}


id: MONDO:0011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal atresia, encephalocele, and limb deformities","secondary_identifiers":["MEDGEN:335504","MESH:C564620","OMIM:607132","UMLS:C1846721"],"synonyms":[{"name":"Lel","type":"related"},{"name":"laryngeal atresia, encephalocele, and limb deformities","type":"exact"}],"termid":"MONDO:0011779","xrefs":{"Monarch":{"xref_id":"0011779"}}}


id: MONDO:0024351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial pityriasis rubra pilaris (obsolete MONDO:0024351)","termid":"MONDO:0024351","xrefs":{"Monarch":{"xref_id":"0024351"}}}


id: FYPO:0004138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at telomere during vegetative growth","termid":"FYPO:0005064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004138"}


id: PBO:0035800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0035800"}


id: PBO:0027412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027412"}


id: FYPO:0005322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which anaphase-promoting complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal anaphase-promoting complex assembly","synonyms":[{"name":"normal APC assembly","type":"exact"},{"name":"normal anaphase-promoting complex assembly during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005322"}


id: GO:0140332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a lipopolysaccharide (LPS) from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lipopolysaccharide transfer activity","synonyms":[{"name":"intermembrane LPS transporter activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transfer activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"lipopolysaccharide carrier activity","type":"exact"}],"termid":"GO:0140332"}


id: PBO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Win1","termid":"PBO:0002840"}


id: PBO:0109403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 30, pseudogene","termid":"PBO:0109403"}


id: PR:O13961
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut11 gene.","definition_xrefs":["UniProtKB:O13961","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein ndc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.03","synonyms":[{"name":"Spom972h-cut11","type":"exact"},{"name":"cell untimely torn protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13961"}


id: GO:1900742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to pH","type":"narrow"}],"termid":"GO:1900742"}


id: GO:1990586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). These complexes are assembled and recruited to the cell septum in a strictly controlled sequence and co-ordinate invagination of the cell membrane, inward growth of the peptidoglycan layer, constriction of the outer membrane and separation of daughter cells.","definition_xrefs":["PMID:15165235","GOC:bhm","PMID:21784946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cell septum","termid":"GO:0030428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"divisome complex","termid":"GO:1990586"}


id: GO:1900893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane metabolic process","synonyms":[{"name":"regulation of tridecane metabolism","type":"exact"}],"termid":"GO:1900893"}


id: MOD:02038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-histidine residue with one methyl group.","definition_xrefs":["Unimod:34#H","DeltaMass:215","OMSSA:77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-histidine","synonyms":[{"name":"MOD_RES Methylhistidine","type":"exact"},{"name":"Me1His","type":"exact"},{"name":"Methyl","type":"related"},{"name":"methylh","type":"exact"}],"termid":"MOD:02038"}


id: PBO:0043387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 1","termid":"PBO:0043387"}


id: PBO:0074931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 98","termid":"PBO:0074931"}


id: MONDO:8000012
data:
  {"annotated_genes":["SJAG_05008"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85782],"is_not":false,"summary":null,"term":"MONDO:8000012"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015361)","termid":"MONDO:0015361"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hypothyroidism (obsolete MONDO:0015778)","termid":"MONDO:0015778"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"is_a","term_name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset","termid":"MONDO:0024189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05008":null},"genotype_count":0,"is_obsolete":false,"name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616263","Orphanet:456312","MEDGEN:864165","UMLS:C4015728","GARD:17791"],"synonyms":[{"name":"IMNEPD","type":"exact"},{"name":"infantile-onset multisystem neurologic, endocrine, and pancreatic disease","type":"exact"},{"name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset","type":"broad"}],"termid":"MONDO:8000012","terms_by_termid":{"MONDO:8000012":null},"xrefs":{"Monarch":{"xref_id":"8000012"}}}


id: PBO:0062100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 50 pseudogene","termid":"PBO:0062100"}


id: PBO:0062732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 6","termid":"PBO:0062732"}


id: MONDO:1011006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukodystrophy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, non-human animal","termid":"MONDO:1010238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukodystrophy, sheep","secondary_identifiers":["OMIA:001130-9940"],"termid":"MONDO:1011006","xrefs":{"Monarch":{"xref_id":"1011006"}}}


id: GO:2000882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of starch catabolic process","termid":"GO:2000881"},{"relation_name":"is_a","term_name":"negative regulation of starch metabolic process","termid":"GO:2000905"},{"relation_name":"negatively_regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of starch catabolic process","synonyms":[{"name":"negative regulation of starch breakdown","type":"exact"},{"name":"negative regulation of starch catabolism","type":"exact"},{"name":"negative regulation of starch degradation","type":"exact"}],"termid":"GO:2000882"}


id: PBO:0044661
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 3","termid":"PBO:0044661"}


id: GO:1905013
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 'de novo' NAD biosynthetic process from L-tryptophan.","definition_xrefs":["PMID:12140278","GO_REF:0000058","GOC:PARL","PMID:19843166","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of NAD metabolic process","termid":"GO:1902689"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:1905012"},{"relation_name":"negatively_regulates","term_name":"'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0055086"],"is_obsolete":false,"name":"negative regulation of 'de novo' NAD biosynthetic process from L-tryptophan","synonyms":[{"name":"down regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"down-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"downregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"downregulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"inhibition of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"inhibition of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"negative regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"broad"},{"name":"negative regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905013"}


id: GO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"eye pigment catabolic process","termid":"GO:0046151"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"},{"relation_name":"is_a","term_name":"ocellus pigment catabolic process","termid":"GO:0046159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ommochrome catabolic process","synonyms":[{"name":"ommochrome breakdown","type":"exact"},{"name":"ommochrome catabolism","type":"exact"},{"name":"ommochrome degradation","type":"exact"}],"termid":"GO:0046153"}


id: FYPO:0000761
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population undergoes conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased conjugation frequency","synonyms":[{"name":"increased conjugation efficiency","type":"related"},{"name":"increased mating frequency","type":"exact"},{"name":"increased occurrence of conjugation","type":"exact"},{"name":"increased zygote formation","type":"related"}],"termid":"FYPO:0000761"}


id: PBO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 1 pseudogene","termid":"PBO:0062049"}


id: PBO:0053479
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 452","termid":"PBO:0053479"}


id: GO:1900973
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sarcinapterin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sarcinapterin metabolic process","termid":"GO:1900970"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin biosynthetic process","termid":"GO:1900971"},{"relation_name":"positively_regulates","term_name":"sarcinapterin biosynthetic process","termid":"GO:1900868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0042559"},{"rel_name":"positively_regulates","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0042559"],"is_obsolete":false,"name":"positive regulation of sarcinapterin biosynthetic process","synonyms":[{"name":"activation of sarcinapterin anabolism","type":"exact"},{"name":"activation of sarcinapterin biosynthesis","type":"exact"},{"name":"activation of sarcinapterin biosynthetic process","type":"narrow"},{"name":"activation of sarcinapterin formation","type":"exact"},{"name":"activation of sarcinapterin synthesis","type":"exact"},{"name":"positive regulation of sarcinapterin anabolism","type":"exact"},{"name":"positive regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"positive regulation of sarcinapterin formation","type":"exact"},{"name":"positive regulation of sarcinapterin synthesis","type":"exact"},{"name":"up regulation of sarcinapterin anabolism","type":"exact"},{"name":"up regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up regulation of sarcinapterin formation","type":"exact"},{"name":"up regulation of sarcinapterin synthesis","type":"exact"},{"name":"up-regulation of sarcinapterin anabolism","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up-regulation of sarcinapterin formation","type":"exact"},{"name":"up-regulation of sarcinapterin synthesis","type":"exact"},{"name":"upregulation of sarcinapterin anabolism","type":"exact"},{"name":"upregulation of sarcinapterin biosynthesis","type":"exact"},{"name":"upregulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"upregulation of sarcinapterin formation","type":"exact"},{"name":"upregulation of sarcinapterin synthesis","type":"exact"}],"termid":"GO:1900973"}


id: PBO:0084984
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-cytochrome P450 reductase; involved in ergosterol biosynthesis; associated and coordinately regulated with Erg11p","termid":"PBO:0084984"}


id: MONDO:0037940
data:
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id: MONDO:0011749
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id: MONDO:0007254
data:
  {"annotated_genes":["SJAG_02426","SJAG_03453","SJAG_02460","SJAG_04206","SJAG_00757","SJAG_04394","SJAG_04502","SJAG_01410","SJAG_00079","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87671,87672,86551,87675,86553,86550,87673,86554,87674,86552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the breast. The vast majority of cases are carcinomas arising from the breast parenchyma or the nipple. Malignant breast neoplasms occur more frequently in females than in males.","definition_xrefs":["NCIT:C9335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03720":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:254837009","UMLS:C0006142","ICD9:174.8","ICD10CM:C50","DOID:1612","MEDGEN:651"],"synonyms":[{"name":"breast cancer","type":"exact"},{"name":"breast tumor","type":"broad"},{"name":"breast tumour","type":"broad"},{"name":"cancer of breast","type":"exact"},{"name":"malignant breast neoplasm","type":"exact"},{"name":"malignant breast tumor","type":"exact"},{"name":"malignant breast tumour","type":"exact"},{"name":"malignant neoplasm of breast","type":"exact"},{"name":"malignant neoplasm of the breast","type":"exact"},{"name":"malignant tumor of breast","type":"exact"},{"name":"malignant tumor of the breast","type":"exact"},{"name":"malignant tumour of breast","type":"exact"},{"name":"malignant tumour of the breast","type":"exact"},{"name":"mammary cancer","type":"exact"},{"name":"mammary neoplasm","type":"related"},{"name":"mammary tumor","type":"broad"},{"name":"mammary tumour","type":"broad"},{"name":"primary breast cancer","type":"narrow"}],"termid":"MONDO:0007254","terms_by_termid":{"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0007254"}}}


id: PBO:0059231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L2 pseudogene 1","termid":"PBO:0059231"}


id: GO:0015807
data:
  {"annotated_genes":["SJAG_04725","SJAG_03256","SJAG_00626","SJAG_02029","SJAG_03899","SJAG_00543","SJAG_05346","SJAG_03400","SJAG_00522","SJAG_03970","SJAG_04637","SJAG_02605","SJAG_00991","SJAG_04588","SJAG_03591","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[100681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[97684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[104148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[99149,63577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[98550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[104149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901481"},{"annotations":[104150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[97685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[104151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[100682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[103118,104152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[110338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[104154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[65875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[104155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[108221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[88432],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[93674,92080,99204,110851],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[99205,92081,93675],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93676],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[63575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of L-enantiomer amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00991":null,"SJAG_02029":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03899":null,"SJAG_03970":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015807","terms_by_termid":{"GO:0015813":null,"GO:0015825":null,"GO:0015828":null,"GO:0070778":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0110141":null,"GO:1901481":null,"GO:1901482":null,"GO:1902475":null,"GO:1903826":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1990575":null,"GO:1990818":null}}


id: PBO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-continuous_with","termid":"PBO:0034054"}


id: MONDO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0019303"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy 4, digenic","secondary_identifiers":["OMIM:619478","UMLS:C5561960","MEDGEN:1794170","DOID:0060918"],"synonyms":[{"name":"FSHD4","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 4, digenic","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 4, digenic, digenic dominant","type":"exact"}],"termid":"MONDO:0030355","xrefs":{"Monarch":{"xref_id":"0030355"}}}


id: PBO:0060405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 16, NatA auxiliary subunit","termid":"PBO:0060405"}


id: PR:P78825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.14","secondary_identifiers":["UniProtKB:P78825"],"synonyms":[{"name":"Spom972h-ADK","type":"exact"}],"termid":"PR:P78825"}


id: PBO:0050707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 3","termid":"PBO:0050707"}


id: GO:0018940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen, and synthesized, probably as a fungicide, by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol metabolic process","secondary_identifiers":["MetaCyc:P342-PWY","UM-BBD_pathwayID:orc"],"synonyms":[{"name":"orcin metabolic process","type":"exact"},{"name":"orcin metabolism","type":"exact"},{"name":"orcinol metabolism","type":"exact"}],"termid":"GO:0018940"}


id: PBO:0084543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PAK family of serine/threonine protein kinases; similar to Ste20p; involved in down-regulation of sterol uptake; proposed to be a downstream effector of Cdc42p during polarized growth; SKM1 has a paralog, CLA4, that arose from the whole genome duplication","termid":"PBO:0084543"}


id: PBO:0084488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific prospore protein; required to produce bending force necessary for proper assembly of the prospore membrane during sporulation; identified as a weak high-copy suppressor of the spo1-1 ts mutation; SPO19 has a paralog, YOR214C, that arose from the whole genome duplication","termid":"PBO:0084488"}


id: GO:1905152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:24198377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated sodium channel activity","termid":"GO:1905150"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of voltage-gated sodium channel activity","synonyms":[{"name":"activation of voltage gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-dependent sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive sodium channel","type":"narrow"},{"name":"positive regulation of voltage gated sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up-regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"upregulation of voltage gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905152"}


id: GO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"positive regulation of TLR4 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034145"}


id: PBO:0027296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell","termid":"PBO:0027296"}


id: PBO:0003558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3 (predicted)","termid":"PBO:0003558"}


id: GO:1902723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of satellite cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23212449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle cell proliferation","termid":"GO:0014859"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle satellite cell proliferation","synonyms":[{"name":"down regulation of satellite cell proliferation","type":"exact"},{"name":"down-regulation of satellite cell proliferation","type":"exact"},{"name":"downregulation of satellite cell proliferation","type":"exact"},{"name":"inhibition of satellite cell proliferation","type":"narrow"}],"termid":"GO:1902723"}


id: MOD:01339
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an ethyl group.","definition_xrefs":["Unimod:280","PubMed:9629898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethylated residue","synonyms":[{"name":"EtRes","type":"exact"},{"name":"Ethyl","type":"related"},{"name":"Ethylation","type":"related"}],"termid":"MOD:01339"}


id: PBO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 antisense RNA 1","termid":"PBO:0042323"}


id: PBO:0038450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0038450"}


id: PBO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm6 (predicted)","termid":"PBO:0002290"}


id: PBO:0041085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain and CAAX motif containing","termid":"PBO:0041085"}


id: GO:1902290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["PMID:16040633","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of defense response to oomycetes","termid":"GO:1902288"},{"relation_name":"positively_regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response to oomycetes","synonyms":[{"name":"activation of defense response to oomycetes","type":"narrow"},{"name":"up regulation of defense response to oomycetes","type":"exact"},{"name":"up-regulation of defense response to oomycetes","type":"exact"},{"name":"upregulation of defense response to oomycetes","type":"exact"}],"termid":"GO:1902290"}


id: GO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving teichuronic acid, a polymer containing chains of uronic acids and N-acetylglucosamine found in the cell wall, membrane or capsule of Gram-positive bacteria.","definition_xrefs":["ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"teichuronic acid metabolic process","synonyms":[{"name":"teichuronic acid metabolism","type":"exact"}],"termid":"GO:0050846"}


id: GO:0046190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic phenol-containing compound metabolic process","termid":"GO:0018959"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic phenol-containing compound biosynthetic process","synonyms":[{"name":"aerobic phenol-containing compound anabolism","type":"exact"},{"name":"aerobic phenol-containing compound biosynthesis","type":"exact"},{"name":"aerobic phenol-containing compound formation","type":"exact"},{"name":"aerobic phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046190"}


id: GO:0031039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains polyploid copies of a portion of the cell's complete genome. Transcription of genes occurs in macronuclei. Some ciliate species may contain multiple macronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"macronucleus","secondary_identifiers":["Wikipedia:Macronucleus"],"termid":"GO:0031039"}


id: PBO:0030170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_strand_displacement","termid":"PBO:0030170"}


id: PATO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's possessing or displaying a distinctive feature in type or degree or effect or force.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intensity","termid":"PATO:0000049"}


id: GO:0061575
data:
  {"annotated_genes":["SJAG_00439","SJAG_03618","SJAG_04140","SJAG_04614","SJAG_01213","SJAG_01401","SJAG_03699","SJAG_02057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66334,70633,74360,80128,101945,111514,113275,117374],"is_not":false,"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a cyclin-dependent protein serine/threonine kinase.","definition_xrefs":["PMID:2569363","PMID:3322810","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein serine/threonine kinase regulator activity","termid":"GO:0016538"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase activator activity","termid":"GO:0043539"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00439":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_03618":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016535","GO:0016534"],"synonyms":[{"name":"cyclin-dependent protein kinase 5 activator activity","type":"narrow"}],"termid":"GO:0061575","terms_by_termid":{"GO:0061575":null}}


id: GO:1902317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication termination","termid":"GO:1902294"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"nuclear DNA replication termination","synonyms":[{"name":"DNA replication termination involved in DNA replication during S phase","type":"related"},{"name":"DNA replication termination involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA replication termination involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA replication termination involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"GO:1902317"}


id: PBO:0054187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1562","termid":"PBO:0054187"}


id: PBO:0073364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1","termid":"PBO:0073364"}


id: MONDO:0018117
data:
  {"annotated_genes":["SJAG_01918","SJAG_01356","SJAG_02305","SJAG_04178","SJAG_02119","SJAG_04323","SJAG_02885","SJAG_04110","SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86995,86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013760"},{"annotations":[85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[86286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[86665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011246"},{"annotations":[87297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008086"},{"annotations":[87390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013337"},{"annotations":[86043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[86645,86644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_01356":null,"SJAG_01918":null,"SJAG_02119":null,"SJAG_02305":null,"SJAG_02885":null,"SJAG_04110":null,"SJAG_04178":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680990","MEDGEN:1843236","Orphanet:352301","GARD:21516"],"termid":"MONDO:0018117","terms_by_termid":{"MONDO:0008086":null,"MONDO:0008922":null,"MONDO:0010155":null,"MONDO:0011246":null,"MONDO:0012787":null,"MONDO:0013337":null,"MONDO:0013584":null,"MONDO:0013760":null,"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0018117"}}}


id: MONDO:0700145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant lymphoproliferative disorder that affects dogs. It is characterized by the clonal proliferation of B- or T-lymphocytes in the lymph nodes, bone marrow, and/or extranodal sites.","definition_xrefs":["NCIT:C128121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine lymphoma","secondary_identifiers":["OMIA:001733-9615"],"termid":"MONDO:0700145","xrefs":{"Monarch":{"xref_id":"0700145"}}}


id: PBO:0046224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 17","termid":"PBO:0046224"}


id: PBO:0000894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Cdc48","termid":"PBO:0000894"}


id: GO:1901840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of RNA polymerase I regulatory region sequence-specific DNA binding (obsolete GO:1901840)","synonyms":[{"name":"down regulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"down-regulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"downregulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"inhibition of RNA polymerase I regulatory region sequence-specific DNA binding","type":"narrow"}],"termid":"GO:1901840"}


id: GO:0044459
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part (obsolete GO:0044459)","termid":"GO:0044459"}


id: GO:0098915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the ventricular cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0098915"}


id: PBO:0028169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_pyrophosphohydrolase_activity","termid":"PBO:0028169"}


id: PBO:0066423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention in endoplasmic reticulum sorting receptor 1","termid":"PBO:0066423"}


id: PBO:0070010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1307, pseudogene","termid":"PBO:0070010"}


id: PBO:0069510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 778, pseudogene","termid":"PBO:0069510"}


id: GO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the breakdown of ethanolamine to form acetaldehyde and ammonia.","definition_xrefs":["PMID:1550360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase complex","termid":"GO:0009350"}


id: PR:Q9C0X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.10 gene.","definition_xrefs":["UniProtKB:Q9C0X5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB8E5.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.10","synonyms":[{"name":"Spom972h-SPAPB8E5.10","type":"exact"}],"termid":"PR:Q9C0X5"}


id: GO:0047249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (25S)-5beta-spirostan-3beta-ol + UDP-D-glucose = (25S)-5beta-spirostan-3beta-yl beta-D-glucoside + H+ + UDP.","definition_xrefs":["EC:2.4.1.193","RHEA:14461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sarsapogenin 3-beta-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04359","MetaCyc:2.4.1.193-RXN"],"synonyms":[{"name":"UDP-glucose:(25S)-5beta-spirostan-3beta-ol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:(25S)-5beta-spirostan-3beta-ol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"sarsapogenin 3beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-sarsapogenin glucosyltransferase activity","type":"related"}],"termid":"GO:0047249"}


id: GO:0050867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell activation","synonyms":[{"name":"activation of cell activation","type":"narrow"},{"name":"stimulation of cell activation","type":"narrow"},{"name":"up regulation of cell activation","type":"exact"},{"name":"up-regulation of cell activation","type":"exact"},{"name":"upregulation of cell activation","type":"exact"}],"termid":"GO:0050867"}


id: GO:0030546
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99778],"is_not":false,"summary":null,"term":"GO:0030546"}]},"cv_name":"molecular_function","definition":"The function of interacting (directly or indirectly) with receptors such that the proportion of receptors in the active form is increased.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor regulator activity","termid":"GO:0030545"},{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"signaling receptor activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"receptor activator activity","type":"broad"},{"name":"signalling receptor activator activity","type":"exact"}],"termid":"GO:0030546","terms_by_termid":{"GO:0030546":null}}


id: SO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine","secondary_identifiers":["RNAMOD:037"],"synonyms":[{"name":"yW","type":"exact"}],"termid":"SO:0001332"}


id: PBO:0043995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 pseudogene 2","termid":"PBO:0043995"}


id: PBO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex catalytic subunit Naa10 (predicted)","termid":"PBO:0002203"}


id: PR:O74325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain-containing protein C1685.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.05","synonyms":[{"name":"Spom972h-SPBC1685.05","type":"exact"}],"termid":"PR:O74325"}


id: MONDO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neural tube defect (obsolete MONDO:0000860)","termid":"MONDO:0000860","xrefs":{"Monarch":{"xref_id":"0000860"}}}


id: GO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed orientation of lymphocyte signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with an appropriate activating cell.","definition_xrefs":["PMID:11244041","PMID:12615889","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"part_of","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of lymphocyte polarity","synonyms":[{"name":"lymphocyte polarization","type":"exact"}],"termid":"GO:0001767"}


id: FYECO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dethiobiotin was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited dethiobiotin","synonyms":[{"name":"limited desthiobiotin added","type":"exact"}],"termid":"FYECO:0000195"}


id: PBO:0031808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_passage_through_START_of_mitotic_cell_cycle","termid":"PBO:0031808"}


id: PBO:0031186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_thiamine_diphosphokinase_activity","termid":"PBO:0031186"}


id: PBO:0069213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 468, pseudogene","termid":"PBO:0069213"}


id: PBO:0082857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homology TRAPPC1 complements yeast null mutant","termid":"PBO:0082857"}


id: MONDO:0004781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrosis of the myocardium, as a result of interruption of the blood supply to the area. It is characterized by a severe and rapid onset of symptoms that may include chest pain, often radiating to the left arm and left side of the neck, dyspnea, sweating, and palpitations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute myocardial infarction","secondary_identifiers":["ICD9:410.82","ICD9:410.91","ICD9:410.92","NCIT:C35204","SCTID:57054005","UMLS:C0155626","ICD9:410.80","ICD9:410.81","ICD9:410.90","ICD10CM:I21.9","EFO:0008583","icd11.foundation:1334938734","ICD9:410","ICD9:410.9","DOID:9408","MEDGEN:57611"],"synonyms":[{"name":"acute myocardial infarction (disease)","type":"exact"},{"name":"myocardial infarction (disease), acute","type":"exact"}],"termid":"MONDO:0004781","xrefs":{"Monarch":{"xref_id":"0004781"}}}


id: PBO:0089722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane lipid metabolism regulator Opa3","termid":"PBO:0089722"}


id: PBO:0070369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 7","termid":"PBO:0070369"}


id: GO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenosine)(out) + Na+(out) = (pyrimidine nucleoside or adenosine)(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"},{"relation_name":"is_a","term_name":"nucleoside:sodium symporter activity","termid":"GO:0005415"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyrimidine- and adenosine-specific:sodium symporter activity","synonyms":[{"name":"pyrimidine- and adenine-specific:sodium symporter activity","type":"related"}],"termid":"GO:0015389"}


id: MONDO:0016188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of alphaB-cristallin","secondary_identifiers":["UMLS:C5680838","MEDGEN:1843314","Orphanet:209044","GARD:20427"],"termid":"MONDO:0016188","xrefs":{"Monarch":{"xref_id":"0016188"}}}


id: PBO:0083976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-responsive transcription factor; regulates expression of several glucose transporter (HXT) genes in response to glucose; binds to promoters and acts both as a transcriptional activator and repressor; recruits Tup1p/Cyc8p to target gene promoters; RGT1 has a paralog, EDS1, that arose from the whole genome duplication","termid":"PBO:0083976"}


id: GO:0009997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast cell fate specification","termid":"GO:0042686"},{"relation_name":"is_a","term_name":"negative regulation of cardioblast differentiation","termid":"GO:0051892"},{"relation_name":"is_a","term_name":"negative regulation of cardiac cell fate specification","termid":"GO:2000044"},{"relation_name":"negatively_regulates","term_name":"cardioblast cell fate specification","termid":"GO:0042685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast cell fate specification","secondary_identifiers":["GO:0042687"],"synonyms":[{"name":"down regulation of cardioblast cell fate specification","type":"exact"},{"name":"down-regulation of cardioblast cell fate specification","type":"exact"},{"name":"downregulation of cardioblast cell fate specification","type":"exact"},{"name":"inhibition of cardioblast cell fate specification","type":"narrow"},{"name":"suppression of cardioblast cell fate","type":"exact"}],"termid":"GO:0009997"}


id: PBO:0081758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 688","termid":"PBO:0081758"}


id: PBO:0087986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; catalyzes the conversion of uridine to pseudouridine at position 31 in cytoplasmic and mitochondrial tRNAs; mutation of Asp168 to Ala abolishes enzyme activity; not essential for viability","termid":"PBO:0087986"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: FYPO:0004437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of mitotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:17515930","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic recombination","termid":"FYPO:0000503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic recombination frequency","synonyms":[{"name":"normal mitotic recombination frequency during vegetative growth","type":"exact"},{"name":"normal occurrence of mitotic recombination","type":"exact"},{"name":"normal recombination frequency during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004437"}


id: PBO:0027263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_multiseptate_cell","termid":"PBO:0027263"}


id: GO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the melanosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"melanosome lumen","termid":"GO:0034493"}


id: MONDO:0006686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infarctions that occur in the brain stem which is comprised of the midbrain; pons; and medulla oblongata. There are several named syndromes characterized by their distinctive clinical manifestations and specific sites of ischemic injury.","definition_xrefs":["MESH:D020526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain infarction","termid":"MONDO:0005394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain stem infarction","secondary_identifiers":["MEDGEN:101068","UMLS:C0521542","DOID:3523","EFO:1000847","ICD9:434.91","SCTID:95457000"],"synonyms":[{"name":"brain infarction of brainstem","type":"exact"},{"name":"brainstem brain infarction","type":"exact"},{"name":"brainstem infarction","type":"exact"}],"termid":"MONDO:0006686","xrefs":{"Monarch":{"xref_id":"0006686"}}}


id: GO:0046820
data:
  {"annotated_genes":["SJAG_02408"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73270],"is_not":false,"summary":null,"term":"GO:0046820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + chorismate = 4-amino-4-deoxychorismate + L-glutamate. It is composed of two enzymatic activities (which may be present on one or two polypeptides); the first is a glutaminase which yields ammonia from glutamine, releasing glutamate. The ammonia is used by the second activity which catalyzes the amination of chorismate to form 4-amino-4-deoxychorismate.","definition_xrefs":["EC:2.6.1.85","RHEA:11672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02408":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"4-amino-4-deoxychorismate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01716","MetaCyc:PABASYN-RXN"],"synonyms":[{"name":"ADC synthase activity","type":"related"},{"name":"PabB activity","type":"related"},{"name":"aminodeoxychorismate synthase activity","type":"related"},{"name":"chorismate:L-glutamine amido-ligase activity","type":"related"},{"name":"p-aminobenzoate synthetase","type":"related"},{"name":"para-aminobenzoic acid (PABA) synthase","type":"related"},{"name":"para-aminobenzoic acid synthase activity","type":"related"}],"termid":"GO:0046820","terms_by_termid":{"GO:0046820":null}}


id: PBO:0065092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 1","termid":"PBO:0065092"}


id: PBO:0081324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF114 antisense RNA 1","termid":"PBO:0081324"}


id: PBO:0081546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 462","termid":"PBO:0081546"}


id: PBO:0078570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51D, pseudogene","termid":"PBO:0078570"}


id: FYPO:0002928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of normal (i.e. indistinguishable from wild type) length.","definition_xrefs":["PomBase:mah","PMID:24081329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal poly(A) tail length","synonyms":[{"name":"normal polyA sequence length","type":"exact"},{"name":"normal polyA tail length","type":"exact"}],"termid":"FYPO:0002928"}


id: PBO:0075917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 9","termid":"PBO:0075917"}


id: PBO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha and beta receptor subunit 1","termid":"PBO:0050949"}


id: GO:1901914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"negatively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of capsule organization","synonyms":[{"name":"down regulation of capsule organisation","type":"exact"},{"name":"down regulation of capsule organization","type":"exact"},{"name":"down regulation of capsule organization and biogenesis","type":"related"},{"name":"down-regulation of capsule organisation","type":"exact"},{"name":"down-regulation of capsule organization","type":"exact"},{"name":"down-regulation of capsule organization and biogenesis","type":"related"},{"name":"downregulation of capsule organisation","type":"exact"},{"name":"downregulation of capsule organization","type":"exact"},{"name":"downregulation of capsule organization and biogenesis","type":"related"},{"name":"inhibition of capsule organisation","type":"narrow"},{"name":"inhibition of capsule organization","type":"narrow"},{"name":"inhibition of capsule organization and biogenesis","type":"related"},{"name":"negative regulation of capsule organisation","type":"exact"},{"name":"negative regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901914"}


id: GO:0007137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase II, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis II.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase","termid":"GO:0051323"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051327"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051327","GO:0008150"],"is_obsolete":false,"name":"meiotic metaphase II","termid":"GO:0007137"}


id: PBO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 14","termid":"PBO:0050104"}


id: PBO:0060546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 intronic transcript 1","termid":"PBO:0060546"}


id: GO:0016180
data:
  {"annotated_genes":["SJAG_00559","SJAG_00083","SJAG_04321","SJAG_04153","SJAG_01958","SJAG_03572","SJAG_01234","SJAG_02156","SJAG_04527","SJAG_01176","SJAG_00088","SJAG_00566","SJAG_04824","SJAG_03179","SJAG_00081","SJAG_04084","SJAG_02993","SJAG_00854","SJAG_04754","SJAG_04586","SJAG_01191","SJAG_01521","SJAG_03257","SJAG_01798","SJAG_04818","SJAG_04286"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90973,108349,116354],"is_not":false,"summary":null,"term":"GO:0016180"},{"annotations":[95524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[115750,104143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[114599,106611,78132,80470,59271,106550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[72067,72860,71606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[102492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[72068,72861,73962,71607,77048,78046,75428,74719,88721,76674,73583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[71608,72069,90320,99268,72862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[79690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule. The primary function of snRNAs is processing pre-messenger RNA in the nucleus. They have also been shown to aid in the regulation of transcription factors (7SK RNA) or RNA polymerase II (B2 RNA), and maintaining the telomeres.","definition_xrefs":["PMID:31815536","PMID:15196465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_01958":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_03572":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04286":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04586":null,"SJAG_04754":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016073"],"is_obsolete":false,"name":"snRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNA maturation","type":"exact"},{"name":"snRNA production","type":"exact"}],"termid":"GO:0016180","terms_by_termid":{"GO:0016180":null,"GO:0031120":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0120049":null}}


id: PBO:0061305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPEPPS pseudogene 2","termid":"PBO:0061305"}


id: PBO:0042996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint with forkhead and ring finger domains","termid":"PBO:0042996"}


id: GO:0030263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The compaction of chromatin during apoptosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic chromosome condensation","secondary_identifiers":["Wikipedia:Pyknosis"],"synonyms":[{"name":"pyknosis","type":"exact"}],"termid":"GO:0030263"}


id: MONDO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Vibrio vulnificus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vibrio infectious disease","termid":"MONDO:0007014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vibrio vulnificus infectious disease","secondary_identifiers":["MESH:C536348","MEDGEN:220886","SCTID:402965002","UMLS:C1274377"],"synonyms":[{"name":"Vibrio vulnificus caused disease or disorder","type":"exact"},{"name":"Vibrio vulnificus disease or disorder","type":"exact"},{"name":"Vibrio vulnificus infectious disease","type":"exact"},{"name":"vibrio vulnificus infection","type":"exact"},{"name":"vibrio vulnificus infectious disease","type":"exact"}],"termid":"MONDO:0043297","xrefs":{"Monarch":{"xref_id":"0043297"}}}


id: GO:0120188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:22767443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of bile acid secretion","termid":"GO:0120188"}


id: MONDO:0023557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the vagina. Symptoms include pain and purulent discharge.","definition_xrefs":["NCIT:C84353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective vaginitis","secondary_identifiers":["icd11.foundation:1436361154","SCTID:237091009","UMLS:C0404521","MEDGEN:140795"],"synonyms":[{"name":"Infective vaginitis","type":"related"},{"name":"PV - Vaginal infection","type":"related"},{"name":"Vaginal Infection","type":"related"},{"name":"Vaginal infection","type":"related"},{"name":"vaginal infection","type":"exact"}],"termid":"MONDO:0023557","xrefs":{"Monarch":{"xref_id":"0023557"}}}


id: MONDO:0971004
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87569],"is_not":false,"summary":null,"term":"MONDO:0971004"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyloid neuropathy","termid":"MONDO:0007100"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005244"],"is_obsolete":false,"name":"amyloidosis, hereditary systemic 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:105210","UMLS:C2751492","MEDGEN:414031"],"termid":"MONDO:0971004","terms_by_termid":{"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0971004"}}}


id: PBO:0027599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin,_incomplete_secondary_cell_septum","termid":"PBO:0027599"}


id: FYPO:0007672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate of transcription scales linearly with nuclear size instead of total cell size. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:32059768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"transcription scaling with nuclear size decoupled from cell size","synonyms":[{"name":"abnormal transcription scaling with nuclear size","type":"exact"},{"name":"linear transcription scaling with nuclear size decoupled from cell size","type":"exact"},{"name":"transcription scaling with nuclear size decoupled from cell size during mitotic cell cycle","type":"related"},{"name":"transcription scaling with nuclear size decoupled from cell size during vegetative growth","type":"exact"}],"termid":"FYPO:0007672"}


id: GO:0071486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to high light intensity","termid":"GO:0009644"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high light intensity","termid":"GO:0071486"}


id: MOD:01963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine.","definition_xrefs":["RESID:AA0607","PubMed:23030644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DATDGlc) serine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-serine","type":"exact"},{"name":"O-[N,N-diacetylbacillosaminyl]serine","type":"exact"},{"name":"O-[N2,N4-diacetylbacillosaminyl]serine","type":"exact"}],"termid":"MOD:01963"}


id: PBO:0084770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NAD+ transporter; member of the mitochondrial carrier subfamily (see also YIA6); has putative human ortholog; YEA6 has a paralog, YIA6, that arose from the whole genome duplication; human NAD+ transporter MCART1/SLC25A51 functionally complements the yia6 yea6 double null mutant, and yeast YEA6 reciprocally complements defects in MCART1/SLC25A51 null cells","termid":"PBO:0084770"}


id: PBO:0073107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sidekick cell adhesion molecule 2","termid":"PBO:0073107"}


id: MONDO:0011120
data:
  {"annotated_genes":["SJAG_04425","SJAG_03712","SJAG_04156","SJAG_01466","SJAG_04459","SJAG_00106","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87703,87704,87705,87706,87707,87708,87709],"is_not":false,"summary":null,"term":"MONDO:0011120"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated spina bifida","termid":"MONDO:0019351"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01466":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04156":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"neural tube defects, folate-sensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:355746","OMIM:601634","MESH:C536409","UMLS:C1866558"],"synonyms":[{"name":"NTD, folate-sensitive","type":"related"},{"name":"NTDFS","type":"related"},{"name":"neural tube defects, folate-sensitive","type":"exact"},{"name":"neural tube defects, folate-sensitive, susceptibility to","type":"related"},{"name":"neural tube defects, susceptibility to","type":"related"},{"name":"spina bifida, folate-sensitive","type":"related"}],"termid":"MONDO:0011120","terms_by_termid":{"MONDO:0011120":null},"xrefs":{"Monarch":{"xref_id":"0011120"}}}


id: FYPO:0003530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type). The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000631","FYPO:0000298","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"normal intra-S DNA damage checkpoint","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0003530"}


id: GO:1905269
data:
  {"annotated_genes":["SJAG_00142","SJAG_02342","SJAG_02592","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[91523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[91524,94709,110657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromatin organization.","definition_xrefs":["PMID:654321","GOC:pr","GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903310","GO:0045799"],"synonyms":[{"name":"activation of chromatin assembly or disassembly","type":"narrow"},{"name":"activation of chromatin organisation","type":"narrow"},{"name":"activation of chromatin organization","type":"narrow"},{"name":"activation of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"positive regulation of chromatin assembly or disassembly","type":"related"},{"name":"positive regulation of chromatin assembly/disassembly","type":"related"},{"name":"positive regulation of chromatin modification","type":"related"},{"name":"positive regulation of chromatin organisation","type":"exact"},{"name":"positive regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"stimulation of chromatin assembly or disassembly","type":"narrow"},{"name":"up regulation of chromatin assembly or disassembly","type":"related"},{"name":"up regulation of chromatin organisation","type":"exact"},{"name":"up regulation of chromatin organization","type":"exact"},{"name":"up regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"up-regulation of chromatin assembly or disassembly","type":"related"},{"name":"up-regulation of chromatin organisation","type":"exact"},{"name":"up-regulation of chromatin organization","type":"exact"},{"name":"up-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"upregulation of chromatin assembly or disassembly","type":"exact"},{"name":"upregulation of chromatin organisation","type":"exact"},{"name":"upregulation of chromatin organization","type":"exact"},{"name":"upregulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905269","terms_by_termid":{"GO:0031453":null,"GO:0090053":null,"GO:0090055":null}}


id: MONDO:0021500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the spleen.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system organ benign neoplasm","termid":"MONDO:0000630"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"benign neoplasm of spleen","secondary_identifiers":["MEDGEN:146355","ICD9:211.9","UMLS:C0686615","NCIT:C4902","SCTID:92408009"],"synonyms":[{"name":"benign neoplasm of the spleen","type":"exact"},{"name":"benign splenic neoplasm","type":"exact"},{"name":"spleen benign neoplasm","type":"exact"}],"termid":"MONDO:0021500","xrefs":{"Monarch":{"xref_id":"0021500"}}}


id: MONDO:0002098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the facial nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial nerve disorder","secondary_identifiers":["ICD9:351.9","MESH:D005155","EFO:1002051","ICD9:351","NCIT:C27594","UMLS:C0015464","MEDGEN:41946","SCTID:422426003","DOID:1756","ICD10CM:G51"],"synonyms":[{"name":"disease of facial nerve","type":"exact"},{"name":"disease or disorder of facial nerve","type":"exact"},{"name":"disorder of facial nerve","type":"exact"},{"name":"disorder of seventh cranial nerve","type":"related"},{"name":"disorders of the VIIth cranial nerve","type":"related"},{"name":"disorders of the seventh nerve","type":"related"},{"name":"facial nerve disease","type":"exact"},{"name":"facial nerve disease or disorder","type":"exact"},{"name":"facial nerve disorder","type":"exact"},{"name":"facial neuropathy","type":"related"}],"termid":"MONDO:0002098","xrefs":{"Monarch":{"xref_id":"0002098"}}}


id: PBO:0027407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nonsense-mediated_decay","termid":"PBO:0027407"}


id: PBO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RTS1","termid":"PBO:0017584"}


id: PR:000050464
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 12 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Thr-20, Thr-22, Ser-64, Thr-95, Thr-151 and Ser-463 of the amino acid sequence represented by UniProtKB:Q10059. Example: UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:29343550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 12 (Schizosaccharomyces pombe)","termid":"PR:000044734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"PomBase_original_PRO_term_name: cell division control protein 12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc12/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291","type":"narrow"},{"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","type":"exact"}],"termid":"PR:000050464"}


id: PBO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase activator 1","termid":"PBO:0061275"}


id: PBO:0079340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 24, pseudogene","termid":"PBO:0079340"}


id: GO:1901281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructoselysine.","definition_xrefs":["UniPathway:UPA00784","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine catabolic process","termid":"GO:0030392"},{"relation_name":"is_a","term_name":"fructoselysine metabolic process","termid":"GO:0030393"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"fructoselysine catabolic process","synonyms":[{"name":"fructosyllysine breakdown","type":"exact"},{"name":"fructosyllysine catabolic process","type":"exact"},{"name":"fructosyllysine catabolism","type":"exact"},{"name":"fructosyllysine degradation","type":"exact"}],"termid":"GO:1901281"}


id: GO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"negative regulation of epidermis development","termid":"GO:0045683"},{"relation_name":"negatively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal cell differentiation","synonyms":[{"name":"down regulation of epidermal cell differentiation","type":"exact"},{"name":"down-regulation of epidermal cell differentiation","type":"exact"},{"name":"downregulation of epidermal cell differentiation","type":"exact"},{"name":"inhibition of epidermal cell differentiation","type":"narrow"},{"name":"negative regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045605"}


id: PBO:0077858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM2 pseudogene 1","termid":"PBO:0077858"}


id: MONDO:0033637
data:
  {"annotated_genes":["SJAG_02504"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86094],"is_not":false,"summary":null,"term":"MONDO:0033637"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619051","UMLS:C5436685","MEDGEN:1754683","GARD:16406","DOID:0070494"],"synonyms":[{"name":"MC4DN7","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 7","type":"exact"}],"termid":"MONDO:0033637","terms_by_termid":{"MONDO:0033637":null},"xrefs":{"Monarch":{"xref_id":"0033637"}}}


id: PBO:0069757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1040, pseudogene","termid":"PBO:0069757"}


id: MONDO:1011258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa, non-human animal","termid":"MONDO:1010334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, pig","secondary_identifiers":["OMIA:001413-9823"],"termid":"MONDO:1011258","xrefs":{"Monarch":{"xref_id":"1011258"}}}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: GO:0052174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host macromolecule (obsolete GO:0052174)","termid":"GO:0052174"}


id: GO:1905935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25793578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"positively_regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate determination","synonyms":[{"name":"activation of cell fate determination","type":"narrow"},{"name":"up regulation of cell fate determination","type":"exact"},{"name":"up-regulation of cell fate determination","type":"exact"},{"name":"upregulation of cell fate determination","type":"exact"}],"termid":"GO:1905935"}


id: GO:0061435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription from a mobile element promoter.","definition_xrefs":["PMID:9271107","GOC:dph","PMID:12230120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription from a mobile element promoter","termid":"GO:0061435"}


id: PBO:0087718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation","termid":"PBO:0087718"}


id: PBO:0080921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene","termid":"PBO:0080921"}


id: GO:1902364
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down regulation of protein localization to spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down-regulation of protein localization to spindle pole body","type":"exact"},{"name":"downregulation of protein localisation to spindle pole body","type":"exact"},{"name":"downregulation of protein localization to spindle pole body","type":"exact"},{"name":"inhibition of protein localisation to spindle pole body","type":"narrow"},{"name":"inhibition of protein localization to spindle pole body","type":"narrow"},{"name":"negative regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902364","terms_by_termid":{"GO:1902543":null}}


id: PBO:0028501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_UDP-galactose_transmembrane_transport","termid":"PBO:0028501"}


id: PBO:0089871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase T subunit","termid":"PBO:0089871"}


id: GO:0033664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host defense-related protein level (obsolete GO:0033664)","termid":"GO:0033664"}


id: PBO:0056496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 1","termid":"PBO:0056496"}


id: PATO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of magenta color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magenta","termid":"PATO:0000321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light magenta","termid":"PATO:0001253"}


id: GO:0010213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA repair process that is involved in repairing UV-induced DNA damage under non-photoreactivating conditions. The mechanism by which this repair process operates has not yet been completely elucidated.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"non-photoreactive DNA repair","synonyms":[{"name":"light-independent DNA repair","type":"exact"}],"termid":"GO:0010213"}


id: PBO:0042561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 3","termid":"PBO:0042561"}


id: MONDO:0032603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly","termid":"MONDO:0020927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A9","secondary_identifiers":["OMIM:618219","GARD:18177","MEDGEN:1648428","UMLS:C4748721"],"synonyms":[{"name":"PAPA9","type":"related"},{"name":"POLYDACTYLY, POSTAXIAL, TYPE A9","type":"related"}],"termid":"MONDO:0032603","xrefs":{"Monarch":{"xref_id":"0032603"}}}


id: PBO:0113050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; involved in the nuclear import of Hsp82p after DNA damage; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0113050"}


id: GO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanin-concentrating hormone, a cyclic peptide hormone that, upon receptor binding, induces melanin aggregation in melanocytes, and is also involved in regulating food intake and energy balance in mammals.","definition_xrefs":["PMID:9792536","GOC:mah","PMID:11416225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0005488","GO:0140677","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"melanin-concentrating hormone activity","termid":"GO:0030354"}


id: GO:0010611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle hypertrophy","termid":"GO:0010611"}


id: MONDO:0002978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises in the orbit. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbit rhabdomyosarcoma","termid":"MONDO:0002580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit alveolar rhabdomyosarcoma","secondary_identifiers":["MEDGEN:235408","NCIT:C6247","DOID:4384","UMLS:C1335126"],"synonyms":[{"name":"alveolar rhabdomyosarcoma of orbit","type":"exact"},{"name":"alveolar rhabdomyosarcoma of the orbit","type":"exact"}],"termid":"MONDO:0002978","xrefs":{"Monarch":{"xref_id":"0002978"}}}


id: MONDO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the vulva. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C40326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar leiomyoma","secondary_identifiers":["UMLS:C1520087","DOID:5142","MEDGEN:274417"],"synonyms":[{"name":"leiomyoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva leiomyoma","type":"exact"},{"name":"vulvar leiomyoma","type":"exact"}],"termid":"MONDO:0003298","xrefs":{"Monarch":{"xref_id":"0003298"}}}


id: GO:1903997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000059","PMID:10518561","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of non-membrane spanning protein tyrosine kinase activity (obsolete GO:1903997)","synonyms":[{"name":"activation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"narrow"},{"name":"activation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"activation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"activation of focal adhesion kinase activity","type":"narrow"},{"name":"activation of janus kinase 1 activity","type":"narrow"},{"name":"activation of janus kinase 2 activity","type":"narrow"},{"name":"activation of janus kinase 3 activity","type":"narrow"},{"name":"activation of non-membrane spanning protein tyrosine kinase activity","type":"narrow"},{"name":"activation of non-specific protein-tyrosine kinase activity","type":"narrow"},{"name":"activation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"positive regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of focal adhesion kinase activity","type":"narrow"},{"name":"positive regulation of janus kinase 1 activity","type":"narrow"},{"name":"positive regulation of janus kinase 2 activity","type":"narrow"},{"name":"positive regulation of janus kinase 3 activity","type":"narrow"},{"name":"positive regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"positive regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"up regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"up regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"up regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"up regulation of focal adhesion kinase activity","type":"narrow"},{"name":"up regulation of janus kinase 1 activity","type":"narrow"},{"name":"up regulation of janus kinase 2 activity","type":"narrow"},{"name":"up regulation of janus kinase 3 activity","type":"narrow"},{"name":"up regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"up regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"up regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"up-regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of focal adhesion kinase activity","type":"narrow"},{"name":"up-regulation of janus kinase 1 activity","type":"narrow"},{"name":"up-regulation of janus kinase 2 activity","type":"narrow"},{"name":"up-regulation of janus kinase 3 activity","type":"narrow"},{"name":"up-regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"up-regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"up-regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"upregulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"upregulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"upregulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"upregulation of focal adhesion kinase activity","type":"narrow"},{"name":"upregulation of janus kinase 1 activity","type":"narrow"},{"name":"upregulation of janus kinase 2 activity","type":"narrow"},{"name":"upregulation of janus kinase 3 activity","type":"narrow"},{"name":"upregulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"upregulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"upregulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903997"}


id: MONDO:0003643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma characterized by the presence of hylanized vascular channels and is often associated with the presence of calcifications, fibrosis, and hemorrhage.","definition_xrefs":["NCIT:C27777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"giant hemangioma","secondary_identifiers":["MEDGEN:272670","DOID:5774","UMLS:C1333817"],"synonyms":[{"name":"giant hemangioma","type":"exact"}],"termid":"MONDO:0003643","xrefs":{"Monarch":{"xref_id":"0003643"}}}


id: GO:0019900
data:
  {"annotated_genes":["SJAG_06592","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[71329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a kinase, any enzyme that catalyzes the transfer of a phosphate group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"kinase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019900","terms_by_termid":{"GO:0034236":null,"GO:0043424":null}}


id: PBO:0077625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15C","termid":"PBO:0077625"}


id: MOD:00269
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["PubMed:8645220","Unimod:419#S","RESID:AA0264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(sn-1-glycerophosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2Xi)-2,3-dihydroxypropyl]phosphonoxypropanoic acid","type":"exact"},{"name":"Glycerophospho","type":"related"},{"name":"MOD_RES O-(sn-1-glycerophosphoryl)serine","type":"exact"},{"name":"O-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-2,3-dihydroxypropyl hydrogen phosphate-L-serine ester","type":"exact"},{"name":"O3-L-serine glyceryl-1-phosphodiester","type":"exact"},{"name":"alpha-glycerophosphoryl serine","type":"exact"},{"name":"glycerophospho","type":"related"},{"name":"glycerophosphoserine","type":"exact"}],"termid":"MOD:00269"}


id: PBO:0043334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR like membrane protein","termid":"PBO:0043334"}


id: GO:0102146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricetin + S-adenosyl-L-methionine = H+ + 3'-O-methyltricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:27493","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"tricetin O-methytransferase activity","secondary_identifiers":["MetaCyc:RXN-11582"],"termid":"GO:0102146"}


id: MONDO:0014203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAAF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 25","secondary_identifiers":["OMIM:615482","UMLS:C3809641","GARD:15972","DOID:0110615","MEDGEN:815971"],"synonyms":[{"name":"CILD25","type":"exact"},{"name":"DNAAF4 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 25","type":"related"},{"name":"ciliary dyskinesia, primary, 25, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 25","type":"exact"},{"name":"primary ciliary dyskinesia 25 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAAF4","type":"exact"},{"name":"primary ciliary dyskinesia type 25","type":"exact"}],"termid":"MONDO:0014203","xrefs":{"Monarch":{"xref_id":"0014203"}}}


id: GO:0150044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic dense core vesicle exocytosis.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:19448629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"regulates","term_name":"postsynaptic dense core vesicle exocytosis","termid":"GO:0150038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of postsynaptic dense core vesicle exocytosis","termid":"GO:0150044"}


id: FYPO:0008333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ribosome hibernation is normal (i.e. indistinguishable from wild type) during glucose starvation.","definition_xrefs":["PMID:39379376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal ribosome hibernation during glucose starvation","termid":"FYPO:0008333"}


id: GO:1905303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macropinocytosis.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","PMID:18691641","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pinocytosis","termid":"GO:0048549"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"positively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of macropinocytosis","synonyms":[{"name":"activation of macropinocytosis","type":"narrow"},{"name":"up regulation of macropinocytosis","type":"exact"},{"name":"up-regulation of macropinocytosis","type":"exact"},{"name":"upregulation of macropinocytosis","type":"exact"}],"termid":"GO:1905303"}


id: PBO:0058805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7847","termid":"PBO:0058805"}


id: PBO:0068671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 52, pseudogene","termid":"PBO:0068671"}


id: SO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA adenine base,at the 8 carbon, often the product of DNA damage.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8_oxoadenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"8-oxoA","type":"exact"},{"name":"8-oxoadenine","type":"exact"}],"termid":"SO:0001967"}


id: GO:0071094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the cell surface protein CD9.","definition_xrefs":["PMID:10711425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta4 integrin-CD9 complex","synonyms":[{"name":"ITGA6-ITGB4-CD9 complex","type":"narrow"}],"termid":"GO:0071094"}


id: PBO:0078984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 4-1","termid":"PBO:0078984"}


id: PR:O13674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug24 gene.","definition_xrefs":["UniProtKB:O13674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 24 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.09","synonyms":[{"name":"Spom972h-mug24","type":"exact"}],"termid":"PR:O13674"}


id: MONDO:0006241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granuloma located in the liver.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic granuloma","secondary_identifiers":["ICD9:572.8","UMLS:C0745754","SCTID:714253009","MEDGEN:155428","EFO:1000291"],"termid":"MONDO:0006241","xrefs":{"Monarch":{"xref_id":"0006241"}}}


id: GO:0120291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that inhibits or decreases the rate of mitotic recombination-dependent replication fork processing. Suppression of recombination at replication forks is necessary to prevent template switching.","definition_xrefs":["GOC:krc","PMID:30667359","PMID:28586299","GOC:mah","PMID:31149897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitotic recombination-dependent replication fork processing","termid":"GO:1903221"},{"relation_name":"negatively_regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"negative regulation of mitotic recombination-dependent replication fork processing","synonyms":[{"name":"maintenance of template fidelity during replication fork processing","type":"exact"},{"name":"negative regulation of mitotic recombination involved in replication fork processing","type":"related"},{"name":"negative regulation of template switch recombination involved in replication fork processing","type":"exact"},{"name":"suppression of template switching during replication fork processing","type":"exact"}],"termid":"GO:0120291"}


id: PBO:0055568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3004","termid":"PBO:0055568"}


id: MONDO:0030330
data:
  {"annotated_genes":["SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86692],"is_not":false,"summary":null,"term":"MONDO:0030330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543638","MEDGEN:1780781","OMIM:619433"],"synonyms":[{"name":"RCM6","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 6","type":"exact"}],"termid":"MONDO:0030330","terms_by_termid":{"MONDO:0030330":null},"xrefs":{"Monarch":{"xref_id":"0030330"}}}


id: GO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular basement membrane over time, from its formation to the mature structure. The metanephric glomerular basement membrane is the basal laminal portion of the metanephric glomerulus which performs the actual filtration.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular basement membrane development","termid":"GO:0032836"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular basement membrane development","termid":"GO:0072274"}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: MONDO:0011993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspirin resistance","secondary_identifiers":["MEDGEN:330835","UMLS:C1842372","OMIM:608223"],"synonyms":[{"name":"aspirin resistance","type":"exact"},{"name":"aspirin, resistance to Antithrombotic Effect of","type":"related"},{"name":"aspirin, resistance to Cardioprotective Effect of","type":"related"}],"termid":"MONDO:0011993","xrefs":{"Monarch":{"xref_id":"0011993"}}}


id: MONDO:0010861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 15q26.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","PMID:7842018","DOID:0110742"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 3","secondary_identifiers":["UMLS:C1838262","OMIM:600318","MEDGEN:325372","MESH:C563960"],"synonyms":[{"name":"IDDM3","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 3","type":"related"},{"name":"insulin-dependent diabetes mellitus 3","type":"exact"}],"termid":"MONDO:0010861","xrefs":{"Monarch":{"xref_id":"0010861"}}}


id: FYPO:0003437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein kinase activity during mitotic G1 phase","synonyms":[{"name":"protein kinase activity abolished during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003437"}


id: PBO:0058683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6811","termid":"PBO:0058683"}


id: PBO:0057544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 660","termid":"PBO:0057544"}


id: FYPO:0006431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"enlarged mitotic spindle pole body","synonyms":[{"name":"enlarged mitotic SPB","type":"exact"},{"name":"enlarged spindle pole body during mitotic cell cycle","type":"exact"},{"name":"enlarged spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006431"}


id: PBO:0086562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR103C is not an essential gene","termid":"PBO:0086562"}


id: GO:0052450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of induced systemic resistance in the symbiont organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of induced systemic resistance in symbiont (obsolete GO:0052450)","synonyms":[{"name":"modulation by organism of induced systemic resistance in symbiont","type":"exact"}],"termid":"GO:0052450"}


id: PBO:0049427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 4","termid":"PBO:0049427"}


id: GO:0044364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which an organism has a negative effect on the functioning of the second organism's cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of cells of another organism (obsolete GO:0044364)","synonyms":[{"name":"disruption of cells of other organism","type":"exact"}],"termid":"GO:0044364"}


id: GO:0006083
data:
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