# terms

id: MONDO:0020229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral disease with cataract (obsolete MONDO:0020229)","secondary_identifiers":["Orphanet:98645"],"termid":"MONDO:0020229","xrefs":{"Monarch":{"xref_id":"0020229"}}}


id: SO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The hAT terminal inverted repeat transposon superfamily elements were first found in maize (the Ac/Ds elements). Members of the hAT superfamily have TSDs of 8 bp, relatively short TIRs of 5–27 bp and overall lengths of less than 4 kb.","definition_xrefs":["PMID:11454746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hAT_TIR_transposon","synonyms":[{"name":"Ac transposon","type":"exact"},{"name":"Ac/Ds transposon","type":"exact"},{"name":"DTA transposon","type":"exact"},{"name":"Ds transposon","type":"exact"},{"name":"hAT TIR transposon","type":"exact"},{"name":"hAT transposon","type":"exact"},{"name":"hAT-Ac transposon","type":"exact"}],"termid":"SO:0002279"}


id: PBO:0040419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 4","termid":"PBO:0040419"}


id: MONDO:0030407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with Cushing syndrome as a major feature (obsolete MONDO:0030407)","termid":"MONDO:0030407","xrefs":{"Monarch":{"xref_id":"0030407"}}}


id: PBO:0060691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A2","termid":"PBO:0060691"}


id: PBO:0113323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; related to and functionally redundant with Elm1p and Sak1p for the phosphorylation and activation of Snf1p; localizes to cytosol and peroxisomes; functionally orthologous to LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; TOS3 has a paralog, SAK1, that arose from the whole genome duplication","termid":"PBO:0113323"}


id: MONDO:1010031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triploidy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder, non-human animal","termid":"MONDO:1011307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploidy, non-human animal","secondary_identifiers":["OMIA:001180"],"termid":"MONDO:1010031","xrefs":{"Monarch":{"xref_id":"1010031"}}}


id: PBO:0048993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 4","termid":"PBO:0048993"}


id: GO:1904205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23470307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle hypertrophy","termid":"GO:1904204"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle hypertrophy","termid":"GO:0014734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle hypertrophy","synonyms":[{"name":"down regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"down-regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"downregulation of skeletal muscle hypertrophy","type":"exact"},{"name":"inhibition of skeletal muscle hypertrophy","type":"narrow"}],"termid":"GO:1904205"}


id: PBO:0080295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 59 pseudogene","termid":"PBO:0080295"}


id: GO:1904288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BAT3 complex.","definition_xrefs":["GOC:TermGenie","PMID:23246001","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BAT3 complex binding","synonyms":[{"name":"BAG6-UBL4A-TRC35 complex binding","type":"exact"},{"name":"BAT3-TRC35-UBL4A complex binding","type":"related"},{"name":"Bag6 complex binding","type":"exact"}],"termid":"GO:1904288"}


id: GO:0031366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of an amino group from the side chain of an N-terminal asparagine residue of a protein.","definition_xrefs":["GOC:mah","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-asparagine deamination (obsolete GO:0031366)","termid":"GO:0031366"}


id: FYPO:0005997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any small nuclear RNA (snRNA) primary transcript, snRNA precursor or processing intermediate, or mature snRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"altered snRNA or precursor level","synonyms":[{"name":"abnormal snRNA or precursor level","type":"exact"},{"name":"altered snRNA or precursor accumulation","type":"related"},{"name":"altered snRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered snRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered snRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005997"}


id: GO:0070164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"negatively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adiponectin secretion","synonyms":[{"name":"down regulation of adiponectin secretion","type":"exact"},{"name":"down-regulation of adiponectin secretion","type":"exact"},{"name":"downregulation of adiponectin secretion","type":"exact"},{"name":"inhibition of adiponectin secretion","type":"narrow"}],"termid":"GO:0070164"}


id: PBO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030965"}


id: PBO:0084367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid binding protein; binds to both free fatty acids with preference for saturated long-chain fatty acids and to sterols; contains two independent lipid-binding sites; involved in the export of free fatty acids and acetylated sterols; export functions are redundant with PRY2, and PRY3; important for survival of cells that accumulate free fatty acids; involved in detoxification  of hydrophobic compounds; secreted glycoprotein and member of the CAP/SCP protein superfamily","termid":"PBO:0084367"}


id: GO:1900119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of execution phase of apoptosis","termid":"GO:1900117"},{"relation_name":"positively_regulates","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of execution phase of apoptosis","synonyms":[{"name":"activation of execution phase of apoptosis","type":"narrow"},{"name":"up regulation of execution phase of apoptosis","type":"exact"},{"name":"up-regulation of execution phase of apoptosis","type":"exact"},{"name":"upregulation of execution phase of apoptosis","type":"exact"}],"termid":"GO:1900119"}


id: PBO:0050817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 2","termid":"PBO:0050817"}


id: PBO:0065423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB8 antisense RNA 1 (head to head)","termid":"PBO:0065423"}


id: PATO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the lips to the side facing the tongue.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labiolingually compressed","termid":"PATO:0005017"}


id: GO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002603"}


id: MONDO:0014571
data:
  {"annotated_genes":["SJAG_01630","SJAG_03588"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85794,85795],"is_not":false,"summary":null,"term":"MONDO:0014571"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616289","UMLS:C4225384","GARD:18199","MEDGEN:898858","DOID:0111442"],"synonyms":[{"name":"ACO2 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"OPA9","type":"related"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in ACO2","type":"exact"},{"name":"optic atrophy 9","type":"exact"}],"termid":"MONDO:0014571","terms_by_termid":{"MONDO:0014571":null},"xrefs":{"Monarch":{"xref_id":"0014571"}}}


id: PBO:0057667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1258","termid":"PBO:0057667"}


id: MONDO:0014564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital bile acid synthesis defect in which the cause of the disease is a mutation in the ABCD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"},{"relation_name":"is_a","term_name":"disorder of peroxisomal transporter","termid":"MONDO:0100372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0019053"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 5","secondary_identifiers":["OMIM:616278","MEDGEN:904751","UMLS:C4225390","DOID:0111066"],"synonyms":[{"name":"ABCD3 congenital bile acid synthesis defect","type":"exact"},{"name":"CBAS5","type":"exact"},{"name":"bile acid synthesis defect, congenital, 5","type":"related"},{"name":"bile acid synthesis defect, congenital, type 5","type":"exact"},{"name":"congenital bile acid synthesis defect 5","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in ABCD3","type":"exact"},{"name":"congenital bile acid synthesis defect type 5","type":"exact"}],"termid":"MONDO:0014564","xrefs":{"Monarch":{"xref_id":"0014564"}}}


id: GO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylate + O2 + NAD(P)H + H+ = gentisate + H2O + NAD(P)+.","definition_xrefs":["UM-BBD_reactionID:r1034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"salicylate 5-hydroxylase activity","secondary_identifiers":["RHEA:35307","EC:1.14.13.172","MetaCyc:RXN-10446"],"termid":"GO:0034785"}


id: PBO:0081383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 223","termid":"PBO:0081383"}


id: GO:0140253
data:
  {"annotated_genes":["SJAG_02989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99304],"is_not":false,"summary":null,"term":"GO:0140253"}]},"cv_name":"biological_process","definition":"A cellular process in which two or more cells combine together, their plasma membrane fusing, producing a single cell. In some cases, nuclei fuse, producing a polyploid cell, while in other cases, nuclei remain separate, producing a syncytium.","definition_xrefs":["Wikipedia:Cell_fusion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cell fusion","type":"exact"},{"name":"cell fusion","type":"broad"}],"termid":"GO:0140253","terms_by_termid":{"GO:0140253":null}}


id: PBO:0062819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast associated Ig-like receptor","termid":"PBO:0062819"}


id: GO:0008907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the integration of one DNA segment into another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"integrase activity","secondary_identifiers":["Reactome:R-HSA-164523"],"termid":"GO:0008907"}


id: PBO:0058428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4798","termid":"PBO:0058428"}


id: PBO:0111519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family member 4","termid":"PBO:0111519"}


id: PBO:0072548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory associated protein of MTOR complex 1","termid":"PBO:0072548"}


id: PBO:0077261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10 pseudogene 1","termid":"PBO:0077261"}


id: PBO:0079171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1","termid":"PBO:0079171"}


id: GO:0061634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-D-xylose residues with release of alpha-D-xylose.","definition_xrefs":["EC:3.2.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alpha-D-xyloside xylohydrolase","synonyms":[{"name":"alpha-xylosidase","type":"related"}],"termid":"GO:0061634"}


id: GO:0010229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an inflorescence over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive shoot system development","termid":"GO:0090567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence development","termid":"GO:0010229"}


id: MONDO:0957385
data:
  {"annotated_genes":["SJAG_02210"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86697],"is_not":false,"summary":null,"term":"MONDO:0957385"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 37, early-onset, with striatal lesions","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620427","UMLS:C5830592","DOID:0060956","MEDGEN:1841228"],"termid":"MONDO:0957385","terms_by_termid":{"MONDO:0957385":null},"xrefs":{"Monarch":{"xref_id":"0957385"}}}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: GO:0008628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a hormone, and which triggers the apoptotic signaling pathway in a cell. The pathway starts with reception of a hormone signal, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:bf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hormone-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to hormone","type":"related"},{"name":"induction of apoptosis by hormones","type":"related"}],"termid":"GO:0008628"}


id: FYPO:0006734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins later than normal.","definition_xrefs":["PomBase:mah","PMID:22718908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0006734"}


id: MONDO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital hypothyroidism (obsolete MONDO:0000311)","termid":"MONDO:0000311","xrefs":{"Monarch":{"xref_id":"0000311"}}}


id: PBO:0074814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 15A","termid":"PBO:0074814"}


id: GO:0000124
data:
  {"annotated_genes":["SJAG_00641","SJAG_01658","SJAG_00087","SJAG_03776","SJAG_04613","SJAG_02927","SJAG_02066","SJAG_03599","SJAG_01711","SJAG_04274","SJAG_00584","SJAG_03668","SJAG_03752","SJAG_02458","SJAG_01475","SJAG_00184","SJAG_02541","SJAG_02773","SJAG_04205"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57837,58053,62154,63229,66663,71258,71967,73668,74175,74271,75967,77065,77496,79279,88831,91746,103680,116584,117865],"is_not":false,"summary":null,"term":"GO:0000124"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that deubiquitinates H2A and/or H2B. This complex is organized into several functional submodules: a structural core including the activator binding module and consisting of ADA1 or a homolog, members of the SPT and TAF protein families as well as promotor recruitment factor TRRAP/TRA1, a histone acetyltransferase (HAT) module consisting of GCN5/KAT2A or PCAF/KAT2B, ADA2, ADA3/NGG1, and SGF29 or homologues thereof, a histone deubiquitinase (DUB) module consisting of ATXN7/SGF73, ATXN7L3/SGF11, ENY2/SUS1 and USP22/UBP8 or homologues thereof, and in some taxa a splicing module consisting of SF3B3 and SF3B5 or homologues thereof (not in fungi). In budding yeast also contains Spt8 which distinguishes it from SAGA-like (SLIK) complex (GO:0046695).","definition_xrefs":["PMID:10637607","PMID:19056896","PMID:20838651","PMID:17337012","PMID:33004486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SAGA complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000125","GO:0030914"],"synonyms":[{"name":"PCAF complex","type":"narrow"},{"name":"PCAF histone acetylase-associated complex","type":"narrow"},{"name":"SPT3-TAF9-GCN5 acetylase complex","type":"related"},{"name":"SPT3-TAF9-PCAF acetylase complex","type":"narrow"},{"name":"STAGA coactivator complex","type":"related"},{"name":"STAGA complex","type":"related"},{"name":"Spt-Ada-Gcn5-acetyltransferase complex","type":"exact"}],"termid":"GO:0000124","terms_by_termid":{"GO:0000124":null}}


id: GO:0090076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of skeletal muscle tissue contraction is reduced. Muscle relaxation involves the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of skeletal muscle","termid":"GO:0090076"}


id: PBO:0066172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 5","termid":"PBO:0066172"}


id: MONDO:0011851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"headache disorder","termid":"MONDO:0021146"},{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 6","secondary_identifiers":["MEDGEN:334829","OMIM:607516","UMLS:C1843765","MESH:C564385"],"synonyms":[{"name":"MGR6","type":"related"},{"name":"migraine with or without aura, susceptibility to, 6","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 6","type":"exact"},{"name":"migraine, familial hemiplegic, 4","type":"related"}],"termid":"MONDO:0011851","xrefs":{"Monarch":{"xref_id":"0011851"}}}


id: GO:0021543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pallium development","termid":"GO:0021543"}


id: MONDO:0030059
data:
  {"annotated_genes":["SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85708],"is_not":false,"summary":null,"term":"MONDO:0030059"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 87","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112221","MEDGEN:1719688","OMIM:618916","GARD:16393","UMLS:C5394501"],"synonyms":[{"name":"DEE87","type":"exact"},{"name":"EIEE87","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 87","type":"exact"},{"name":"developmental and epileptic encephalopathy 87","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 87","type":"exact"}],"termid":"MONDO:0030059","terms_by_termid":{"MONDO:0030059":null},"xrefs":{"Monarch":{"xref_id":"0030059"}}}


id: GO:0003294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of heart tissue that contributes to the maturation of the connection between an atrium and a ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial ventricular junction remodeling","synonyms":[{"name":"atrial ventricular junction remodelling","type":"exact"},{"name":"atrio-ventricular junction remodeling","type":"related"},{"name":"atrioventricular junction remodeling","type":"exact"}],"termid":"GO:0003294"}


id: GO:0044019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 72) = CoA + histone H3 N6-acetyl-L-lysine (position 72).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3K72 acetyltransferase activity (obsolete GO:0044019)","synonyms":[{"name":"histone H3-K72 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K72 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K72 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K72 specific)","type":"exact"}],"termid":"GO:0044019"}


id: MONDO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Physical and psychological dependence on the drug heroin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opiate dependence","termid":"MONDO:0005530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heroin dependence","secondary_identifiers":["EFO:0004240","SCTID:231477003","icd11.foundation:443161089","MEDGEN:5532","NCIT:C34694","UMLS:C0019337","MESH:D006556","DOID:9976"],"synonyms":[{"name":"Heroin addiction","type":"exact"}],"termid":"MONDO:0005367","xrefs":{"Monarch":{"xref_id":"0005367"}}}


id: PBO:0080865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 6","termid":"PBO:0080865"}


id: PBO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8 like 1","termid":"PBO:0044602"}


id: PBO:0030663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_leucine_import","termid":"PBO:0030663"}


id: PBO:0091281
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HydroxyUrea Sensitive","termid":"PBO:0091281"}


id: PBO:0046725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 5","termid":"PBO:0046725"}


id: FYECO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and 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were performed in medium containing glucose (typically <2% w/v), salts, and water, and may be supplemented with additional amino acids.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined 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type"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"glucose MM","references_by_uniquename":{"PMID:23873862":null,"PMID:30664646":null,"PMID:31956022":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYECO:0000014"],"single_locus_annotated_genes":["SJAG_04522","SJAG_01355","SJAG_00409","SJAG_02860","SJAG_00601","SJAG_02796","SJAG_04697","SJAG_01458","SJAG_05242","SJAG_01753","SJAG_03920","SJAG_02527","SJAG_04843"],"single_locus_genotype_uniquenames":["wcs2delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","wcs1delta","rga4delta","mdh1delta","acb1delta","sdh3delta","gpd1delta","fum1delta","gms1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","cox6delta","rip1delta"],"synonyms":[{"name":"EMM","type":"narrow"},{"name":"EMMC","type":"narrow"},{"name":"SD medium","type":"exact"},{"name":"glucose minimal medium","type":"exact"},{"name":"normal glucose MM","type":"exact"},{"name":"normal glucose minimal medium","type":"exact"},{"name":"standard glucose minimal medium","type":"exact"}],"termid":"FYECO:0000126","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0035102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that mediates monoubiquitination of lysine residues of histone H2A (lysine-118 in Drosophila or lysine-119 in mammals). The complex is required for stable long-term maintenance of transcriptionally repressed states and is involved in chromatin remodeling.","definition_xrefs":["GOC:bf","PMID:10412979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"PcG protein complex","termid":"GO:0031519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"PRC1 complex","synonyms":[{"name":"Polycomb repressive complex 1","type":"exact"}],"termid":"GO:0035102"}


id: GO:0015806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of S-methylmethionine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"S-methylmethionine transport","termid":"GO:0015806"}


id: GO:1990176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in maltose transport through the plasma membrane. In E. coli, the complex is a tetramer and consists of a cytoplasmic ATPase MalK homodimer together with a heterodimeric transmembrane subunit MalF-MalG.","definition_xrefs":["GOC:bhm","PMID:19250913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"maltose transport complex","termid":"GO:1990060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MalFGK2 complex","synonyms":[{"name":"MalF-MalG-MalK(2) complex","type":"exact"},{"name":"MalF-MalG-MalK-MalK complex","type":"exact"},{"name":"MalFGK(2) complex","type":"exact"},{"name":"maltose transport MalFGK2 complex","type":"exact"},{"name":"maltose transport complex, core subunit","type":"exact"}],"termid":"GO:1990176"}


id: GO:0009730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a carbohydrate stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbohydrate stimulus","synonyms":[{"name":"perception of carbohydrate stimulus","type":"related"}],"termid":"GO:0009730"}


id: MONDO:1012472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"horn cancer, non-human animal","termid":"MONDO:1011824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horn cancer, zebu cattle","secondary_identifiers":["OMIA:001859-9915"],"termid":"MONDO:1012472","xrefs":{"Monarch":{"xref_id":"1012472"}}}


id: GO:1901296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:1901296)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901296"}


id: GO:0032324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:Molybdenum-Cofactor-Biosynthesis","Reactome:R-HSA-947581"],"synonyms":[{"name":"molybdopterin cofactor anabolism","type":"exact"},{"name":"molybdopterin cofactor biosynthesis","type":"related"},{"name":"molybdopterin cofactor formation","type":"related"},{"name":"molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0032324"}


id: PBO:0031420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint","termid":"PBO:0031420"}


id: GO:0007389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:isa_complete","ISBN:0521436125","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification process","synonyms":[{"name":"pattern biosynthesis","type":"related"},{"name":"pattern formation","type":"related"}],"termid":"GO:0007389"}


id: PBO:0057504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 622","termid":"PBO:0057504"}


id: PBO:0067058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 79, pseudogene","termid":"PBO:0067058"}


id: PBO:0080036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 22","termid":"PBO:0080036"}


id: GO:0061775
data:
  {"annotated_genes":["SJAG_00796","SJAG_00682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90015,96580],"is_not":false,"summary":null,"term":"GO:0061775"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to load a cohesin complex around sister chromatids.","definition_xrefs":["PMID:26687354","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"cohesin loader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cohesin loading activity","type":"exact"}],"termid":"GO:0061775","terms_by_termid":{"GO:0061775":null}}


id: GO:0050793
data:
  {"annotated_genes":["SJAG_00236","SJAG_04461","SJAG_04140","SJAG_00661","SJAG_03705","SJAG_01799","SJAG_02536","SJAG_03453","SJAG_00028","SJAG_03486","SJAG_02838","SJAG_04509","SJAG_03637","SJAG_00855","SJAG_00216","SJAG_01456","SJAG_02392","SJAG_04666","SJAG_02169","SJAG_01794","SJAG_04322","SJAG_01212","SJAG_04853","SJAG_00993","SJAG_04203","SJAG_04522","SJAG_00845","SJAG_00596","SJAG_00610","SJAG_02736","SJAG_04724","SJAG_03581","SJAG_02222","SJAG_00304","SJAG_00244","SJAG_00333","SJAG_02379","SJAG_02022","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96180,90204,94913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[111072,100065,107172,116780,118204,88397,103806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[111508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[91064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[116606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[102366,106773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[102608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[91066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[116884,107928],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[100500,94081,105680],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[104019],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[111673,90208,93821,91186,88238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[109194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[92527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"},{"annotations":[117229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903023"},{"annotations":[115351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[119664,119665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[91479,94919,95993,113354,119088,104852],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[88243,103163,92764,106432],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00304":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00855":null,"SJAG_00993":null,"SJAG_01212":null,"SJAG_01456":null,"SJAG_01794":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02736":null,"SJAG_02838":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04140":null,"SJAG_04203":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"termid":"GO:0050793","terms_by_termid":{"GO:0008360":null,"GO:0010637":null,"GO:0034307":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061361":null,"GO:0075296":null,"GO:0075297":null,"GO:0090141":null,"GO:0090258":null,"GO:1902917":null,"GO:1903023":null,"GO:1903024":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0064057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 91","termid":"PBO:0064057"}


id: _global:has_functional_parent
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"'Entity A' has_functional_parent 'Entity B' implies that 'Entity B' has at least one chacteristic group from which 'Entity A' can be derived by functional modification.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_functional_parent","termid":"_global:has_functional_parent"}


id: GO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of boron obtained from boron-containing substances.","definition_xrefs":["PMID:20059736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to boron-containing substance levels","termid":"GO:0080029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to boron-containing substance deprivation","synonyms":[{"name":"cellular response to boron deprivation","type":"exact"},{"name":"cellular response to boron starvation","type":"exact"}],"termid":"GO:0080169"}


id: PBO:0028711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_regional_homologous_chromosome_pairing","termid":"PBO:0028711"}


id: GO:0010675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular carbohydrate metabolic process (obsolete GO:0010675)","termid":"GO:0010675"}


id: MONDO:0012033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bradyopsia is characterized by prolonged electroretinal response suppression leading to difficulties adjusting to changes in luminance, normal to subnormal acuity and photophobia.","definition_xrefs":["Orphanet:75374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bradyopsia","secondary_identifiers":["ICD9:368.8","OMIMPS:608415","MEDGEN:331206","UMLS:C1842073","SCTID:711163009","DOID:0050335","MESH:C564243","GARD:12299","icd11.foundation:1497247503"],"synonyms":[{"name":"PERRS","type":"exact"},{"name":"bradyopsia","type":"exact"},{"name":"prolonged electroretinal response suppression","type":"exact"}],"termid":"MONDO:0012033","xrefs":{"Monarch":{"xref_id":"0012033"}}}


id: PBO:0027901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spliced_cen-dg_RNA_level","termid":"PBO:0027901"}


id: GO:2001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a xanthone-containing compound.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"xanthone-containing compound metabolic process","termid":"GO:2001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthone-containing compound biosynthetic process","synonyms":[{"name":"xanthone biosynthesis","type":"narrow"},{"name":"xanthone biosynthetic process","type":"narrow"},{"name":"xanthone-containing compound anabolism","type":"exact"},{"name":"xanthone-containing compound biosynthesis","type":"exact"},{"name":"xanthone-containing compound formation","type":"exact"},{"name":"xanthone-containing compound synthesis","type":"exact"},{"name":"xanthones anabolism","type":"exact"},{"name":"xanthones biosynthesis","type":"exact"},{"name":"xanthones biosynthetic process","type":"exact"},{"name":"xanthones formation","type":"exact"},{"name":"xanthones synthesis","type":"exact"}],"termid":"GO:2001307"}


id: PBO:0054578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1980","termid":"PBO:0054578"}


id: PBO:0054493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1893","termid":"PBO:0054493"}


id: GO:0034017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-dec-2-enoyl-[acyl-carrier protein] = cis-dec-3-enoyl-[acyl-carrier protein].","definition_xrefs":["RHEA:23568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"trans-2-decenoyl-acyl-carrier-protein isomerase activity","secondary_identifiers":["EC:5.3.3.14","MetaCyc:5.3.3.14-RXN","GO:0043832"],"synonyms":[{"name":"beta-hydroxydecanoyl thioester dehydrase activity","type":"broad"},{"name":"decenoyl-acyl-carrier-protein delta2-trans-delta3-cis-isomerase activity","type":"related"},{"name":"trans-2, cis-3 decenoyl-ACP isomerase activity","type":"exact"},{"name":"trans-2, cis-3 decenoyl-[acyl-carrier-protein] isomerase activity","type":"exact"},{"name":"trans-2,cis-3-decenoyl-ACP isomerase activity","type":"related"},{"name":"trans-2-cis-3-decenoyl-ACP isomerase activity","type":"related"},{"name":"trans-2-decenoyl-ACP isomerase activity","type":"related"}],"termid":"GO:0034017"}


id: PBO:0044333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 16","termid":"PBO:0044333"}


id: GO:0009392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GlcNAc-1,6-anhMurNAc-L-Ala-gamma-D-Glu-DAP-D-Ala + H2O glcNAc-1,6-anhMurNAc + L-Ala-gamma-D-Glu-DAP-D-Ala.","definition_xrefs":["MetaCyc:RXN0-5225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"N-acetyl-anhydromuramoyl-L-alanine amidase activity","termid":"GO:0009392"}


id: MONDO:0025354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 3","secondary_identifiers":["DOID:0112274","MEDGEN:1784059","OMIM:301059","UMLS:C5542347"],"synonyms":[{"name":"SPGFX3","type":"exact"},{"name":"spermatogenic failure, X-linked, 3","type":"exact"},{"name":"spermatogenic failure, X-linked, 3, X-linked recessive","type":"exact"}],"termid":"MONDO:0025354","xrefs":{"Monarch":{"xref_id":"0025354"}}}


id: PBO:0087510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa1p; required for import of long-chain fatty acids into peroxisomes; similar to human adrenoleukodystrophy transportesr ABCD1 and ABCD2, and ALD-related proteins; mutations in ABCD1 cause X-linked adrenoleukodystrophy (X-ALD), a peroxisomal disorder; human ABCD1 and ABCD2 can each partially complement yeast pxa1 pxa2 double null mutant","termid":"PBO:0087510"}


id: FYPO:0006753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:29632066","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased H4-K20 dimethylation during vegetative growth","termid":"FYPO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H4-K20 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H4K20me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006753"}


id: PBO:0059947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 33","termid":"PBO:0059947"}


id: MONDO:0005353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The excessive use of marijuana with associated psychological symptoms and impairment in social or occupational functioning.","definition_xrefs":["EFO:0004218"],"gene_count":0,"genotype_count":0,"name":"obsolete marijuana dependence (obsolete MONDO:0005353)","termid":"MONDO:0005353","xrefs":{"Monarch":{"xref_id":"0005353"}}}


id: GO:0044522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, killing heart myocytes and ultimately resulting in muscle damage in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21150580","PMID:10620318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in muscle damage in another organism","termid":"GO:0044521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in myocyte killing in another organism","synonyms":[{"name":"envenomation resulting in myocyte killing causing muscle damage in other organism","type":"exact"},{"name":"envenomation resulting in myocyte killing in other organism","type":"exact"}],"termid":"GO:0044522"}


id: PBO:0062629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 6","termid":"PBO:0062629"}


id: PBO:0084634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2843 methylation of the 25S rRNA; S-adenosylmethionine-dependent; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR063W is not an essential gene","termid":"PBO:0084634"}


id: GO:1903909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor clustering.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:23575248","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor clustering","termid":"GO:1903909"}


id: PBO:0011127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 1","termid":"PBO:0011127"}


id: PR:O74878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04195","PANTHER:PTHR12526:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.08","secondary_identifiers":["UniProtKB:O74878"],"synonyms":[{"name":"Spom972h-ALG11","type":"exact"},{"name":"alpha-1,2-mannosyltransferase alg11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"asparagine-linked glycosylation protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"galactomannan deficiency protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycolipid 2-alpha-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74878"}


id: PBO:0004359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere binding protein Rap1","termid":"PBO:0004359"}


id: GO:0090193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:tb","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"positively_regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerulus development","termid":"GO:0090193"}


id: PBO:0084461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase of the cis-Golgi apparatus; initiates the polymannose outer chain elongation of N-linked oligosaccharides of glycoproteins","termid":"PBO:0084461"}


id: GO:2000063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"positively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ureter smooth muscle cell differentiation","termid":"GO:2000063"}


id: MONDO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of an infectious disease in which the disease affects an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease characteristic","termid":"MONDO:0045034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary infectious","termid":"MONDO:0045036","xrefs":{"Monarch":{"xref_id":"0045036"}}}


id: MONDO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"chronic eosinophilic leukemia","secondary_identifiers":["NCIT:C4563","ICDO:9964/3","GARD:20104","DOID:0080367","Orphanet:168940","UMLS:C0346421","MESH:C580364","ONCOTREE:CELNOS","MedDRA:10065854","SCTID:188733003","MEDGEN:91106"],"synonyms":[{"name":"CEL","type":"exact"},{"name":"CEL/hypereosinophilic syndrome","type":"exact"},{"name":"CELNOS","type":"related"},{"name":"chronic eosinophilic leukemia","type":"exact"},{"name":"chronic eosinophilic leukemia/hypereosinophilic syndrome","type":"exact"},{"name":"eosinophilic leukaemia","type":"exact"},{"name":"eosinophilic leukemia","type":"exact"}],"termid":"MONDO:0015687","xrefs":{"Monarch":{"xref_id":"0015687"}}}


id: PBO:0071496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34","termid":"PBO:0071496"}


id: PBO:0080532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASHC3 pseudogene 1","termid":"PBO:0080532"}


id: PBO:0057483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 601","termid":"PBO:0057483"}


id: FYPO:0003336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the actomyosin contractile ring for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to cell division site","termid":"FYPO:0002527"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to actomyosin contractile ring","synonyms":[{"name":"increased duration of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased duration of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to contractile ring","type":"exact"},{"name":"increased duration of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased duration of protein localization to mitotic contractile ring","type":"exact"},{"name":"increased duration of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"prolonged protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0003336"}


id: GO:0021701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Golgi cell differentiation","termid":"GO:0021701"}


id: GO:0052589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-malate + a menaquinone = oxaloacetate + a menaquinol.","definition_xrefs":["MetaCyc:RXNI-3"],"gene_count":0,"genotype_count":0,"name":"obsolete malate dehydrogenase (menaquinone) activity (obsolete GO:0052589)","termid":"GO:0052589"}


id: GO:0099010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of postsynaptic structure","synonyms":[{"name":"synapse remodelling","type":"broad"}],"termid":"GO:0099010"}


id: GO:0008820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide phosphate + GTP + 2 H+ = adenosylcobinamide-GDP + diphosphate.","definition_xrefs":["RHEA:22712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"cobinamide phosphate guanylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05222","EC:2.7.7.62","GO:0043753","MetaCyc:COBINPGUANYLYLTRANS-RXN"],"synonyms":[{"name":"AdoCbi kinase/AdoCbi-phosphate guanylyltransferase","type":"broad"},{"name":"CobU","type":"related"},{"name":"GTP:adenosylcobinamide-phosphate guanylyltransferase activity","type":"exact"},{"name":"GTP:cobinamide phosphate guanylyltransferase activity","type":"exact"},{"name":"adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase","type":"broad"},{"name":"adenosylcobinamide-phosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0008820"}


id: PBO:0082284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Apyrase with wide substrate specificity; helps prevent inhibition of glycosylation by hydrolyzing nucleoside tri- and diphosphates that inhibit glycotransferases; partially redundant with Gda1p; mediates adenovirus E4orf4-induced toxicity","termid":"PBO:0082284"}


id: PBO:0031869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dopey family protein Dop1","termid":"PBO:0031869"}


id: PBO:0087816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa1p, for ribosomal protein gene transcription in vivo; homologous to smallest subunit of human and Drosophila TFIIA; protein abundance increases in response to DNA replication stress","termid":"PBO:0087816"}


id: MONDO:0020525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient neonatal diabetes mellitus (TNDM) is a genetically heterogeneous form of neonatal diabetes (NDM) characterized by hyperglycemia presenting in the neonatal period that remits during infancy but recurs in later life in most patients.","definition_xrefs":["Orphanet:99886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal diabetes mellitus","termid":"MONDO:0016391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"transient neonatal diabetes mellitus","secondary_identifiers":["HP:0008255","UMLS:C0342273","DOID:0060334","NCIT:C114899","SCTID:237603002","icd11.foundation:1596856936","MEDGEN:449530"],"synonyms":[{"name":"TNDM","type":"exact"},{"name":"chromosome 6-associated transient diabetes mellitus","type":"related"},{"name":"diabetes mellitus, 6q24-related transient neonatal","type":"related"},{"name":"diabetes mellitus, transient neonatal","type":"related"},{"name":"transient neonatal diabetes mellitus","type":"exact"},{"name":"transient neonatal diabetes mellitus (disease)","type":"exact"}],"termid":"MONDO:0020525","xrefs":{"Monarch":{"xref_id":"0020525"}}}


id: GO:0070248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["GOC:add","ISBN:0781765196","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"negatively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell apoptotic process","synonyms":[{"name":"down regulation of natural killer cell apoptosis","type":"exact"},{"name":"down-regulation of natural killer cell apoptosis","type":"exact"},{"name":"downregulation of natural killer cell apoptosis","type":"exact"},{"name":"inhibition of natural killer cell apoptosis","type":"narrow"},{"name":"negative regulation of NK cell apoptosis","type":"exact"},{"name":"negative regulation of natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070248"}


id: FYPO:0002350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal stress granule assembly during vegetative growth","synonyms":[{"name":"normal cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during mitotic cell cycle","type":"related"},{"name":"normal stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002350"}


id: GO:0097295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["GOC:yaf","PMID:19567876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"morphine metabolic process","termid":"GO:0071272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"morphine biosynthetic process","synonyms":[{"name":"morphine anabolism","type":"exact"},{"name":"morphine biosynthesis","type":"exact"},{"name":"morphine formation","type":"exact"},{"name":"morphine synthesis","type":"exact"}],"termid":"GO:0097295"}


id: PBO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3 (predicted)","termid":"PBO:0013745"}


id: MONDO:0018114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated brachycephaly is a relatively frequent nonsyndromic craniosynostosis consisting of premature fusion of both coronal sutures leading to skull deformity with a broad flat forehead and palpable coronal ridges.","definition_xrefs":["Orphanet:35099"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"}],"gene_count":0,"genotype_count":0,"name":"obsolete isolated brachycephaly (obsolete MONDO:0018114)","synonyms":[{"name":"non-syndromic bicoronal synostosis","type":"exact"}],"termid":"MONDO:0018114","xrefs":{"Monarch":{"xref_id":"0018114"}}}


id: GO:1900101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"regulation of ER unfolded protein response","type":"exact"},{"name":"regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"regulation of erUPR","type":"exact"}],"termid":"GO:1900101"}


id: FYPO:0003354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains a lower amount of galactose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PomBase:mah","PMID:8782411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0003290","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased galactose level in glycoprotein glycan","synonyms":[{"name":"decreased galactose level in glycoprotein oligosaccharide","type":"related"},{"name":"decreased level of alpha 1,2-linked galactose residues in glycoprotein glycan","type":"exact"},{"name":"decreased protein glycan galactosylation","type":"related"},{"name":"reduced galactose level in glycoprotein glycan","type":"exact"}],"termid":"FYPO:0003354"}


id: PR:Q09922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F7.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1F7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.11c","synonyms":[{"name":"Spom972h-SPAC1F7.11c","type":"exact"}],"termid":"PR:Q09922"}


id: MONDO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aortic stenosis (obsolete MONDO:0004978)","secondary_identifiers":["NANDO:2100098"],"termid":"MONDO:0004978","xrefs":{"Monarch":{"xref_id":"0004978"}}}


id: MOD:00733
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylglucosamine group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminoglucosylated","synonyms":[{"name":"GlcNAc","type":"exact"}],"termid":"MOD:00733"}


id: GO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of integrins, a large family of transmembrane proteins that act as receptors for cell-adhesion molecules.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"integrin biosynthetic process","synonyms":[{"name":"integrin anabolism","type":"exact"},{"name":"integrin biosynthesis","type":"exact"},{"name":"integrin formation","type":"exact"},{"name":"integrin synthesis","type":"exact"}],"termid":"GO:0045112"}


id: GO:0048033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme O, a derivative of heme containing a 17-carbon hydroxyethylfarnesyl side chain at position 8 of the tetrapyrrole macrocycle.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme O metabolic process","synonyms":[{"name":"haem O metabolic process","type":"exact"},{"name":"haem O metabolism","type":"exact"},{"name":"heme O metabolism","type":"exact"}],"termid":"GO:0048033"}


id: MONDO:0008794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anhidrosis","termid":"MONDO:0006527"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"anhidrosis, familial generalized, with abnormal or absent sweat glands","secondary_identifiers":["MEDGEN:895862","OMIM:206600","UMLS:C4225670"],"synonyms":[{"name":"anhidrosis, familial generalized, with abnormal or absent sweat glands","type":"exact"}],"termid":"MONDO:0008794","xrefs":{"Monarch":{"xref_id":"0008794"}}}


id: PBO:0027849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027849"}


id: FYPO:0000456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone acetylation during vegetative growth","synonyms":[{"name":"abnormal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000456"}


id: PBO:0046614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group MER61 member 1","termid":"PBO:0046614"}


id: MONDO:0859307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cleidocranial dysplasia 2","secondary_identifiers":["UMLS:C5774243","MEDGEN:1824016","OMIM:620099"],"termid":"MONDO:0859307","xrefs":{"Monarch":{"xref_id":"0859307"}}}


id: MONDO:0009257
data:
  {"annotated_genes":["SJAG_03818","SJAG_01784","SJAG_02951"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86387,86388,86389],"is_not":false,"summary":null,"term":"MONDO:0009257"}]},"cv_name":"mondo","definition":"Galactose epimerase deficiency is a very rare, moderate to severe form of galactosemia characterized by moderate to severe signs of impaired galactose metabolism.","definition_xrefs":["Orphanet:79238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"galactose epimerase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5392","MEDGEN:199598","OMIM:230350","UMLS:C0751161","SCTID:8849004","DOID:0111458","NANDO:2200534"],"synonyms":[{"name":"GALE deficiency","type":"exact"},{"name":"GALE-D","type":"exact"},{"name":"Gale deficiency","type":"related"},{"name":"UDP-galactose-4-epimerase deficiency","type":"exact"},{"name":"epimerase deficiency galactosemia","type":"exact"},{"name":"galactose epimerase deficiency","type":"exact"},{"name":"galactosemia 3","type":"related"},{"name":"galactosemia type 3","type":"exact"},{"name":"uridine diphosphate galactose-4-epimerase deficiency","type":"exact"}],"termid":"MONDO:0009257","terms_by_termid":{"MONDO:0009257":null},"xrefs":{"Monarch":{"xref_id":"0009257"}}}


id: GO:0004438
data:
  {"annotated_genes":["SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65686],"is_not":false,"summary":null,"term":"GO:0004438"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3-phosphate + H2O = 1-phosphatidyl-1D-myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-6809777","RHEA:12316","Reactome:R-HSA-1676141","GO:0016315","MetaCyc:PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN","Reactome:R-HSA-6809325","Reactome:R-HSA-1675994","Reactome:R-HSA-6809720","Reactome:R-HSA-6809975","Reactome:R-HSA-1675795","Reactome:R-HSA-1676114"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-3-phosphate 3-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol-1,3-bisphosphate 3-phosphohydrolase activity","type":"related"},{"name":"inositol 1,3-bisphosphate phosphatase activity","type":"related"},{"name":"inositol-1,3-bisphosphate 3-phosphatase activity","type":"related"},{"name":"inositol-polyphosphate 3-phosphatase activity","type":"related"},{"name":"phosphatidyl-3-phosphate 3-phosphohydrolase activity","type":"related"},{"name":"phosphatidylinositol-3-phosphatase activity","type":"exact"}],"termid":"GO:0004438","terms_by_termid":{"GO:0004438":null}}


id: MONDO:0016725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineal parenchymal tumor of intermediate differenciation (obsolete MONDO:0016725)","termid":"MONDO:0016725","xrefs":{"Monarch":{"xref_id":"0016725"}}}


id: PBO:0069061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 308, pseudogene","termid":"PBO:0069061"}


id: PBO:0111497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex associated protein Sap18","termid":"PBO:0111497"}


id: PBO:0070596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 63","termid":"PBO:0070596"}


id: GO:0070482
data:
  {"annotated_genes":["SJAG_00642","SJAG_01585","SJAG_01150","SJAG_00221","SJAG_04018","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101542,110159,117284,112020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[116692,89603],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070482","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: PBO:0043606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen like tail subunit of asymmetric acetylcholinesterase","termid":"PBO:0043606"}


id: PBO:0089652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic23/26/27","termid":"PBO:0089652"}


id: FYPO:0007569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling is abnormal SIN signaling is mediated by the small GTPase Ras, and results in the initiation of contraction of the contractile ring at the beginning of cytokinesis and cell division by septum formation.","definition_xrefs":["PomBase:mah","GO:0031028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal septation initiation network signaling","synonyms":[{"name":"abnormal SIN signaling","type":"exact"},{"name":"abnormal SIN signalling","type":"exact"},{"name":"abnormal septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"abnormal septation initiation network signaling during vegetative growth","type":"exact"},{"name":"abnormal septation initiation network signalling","type":"exact"},{"name":"abnormal septation initiation signaling","type":"exact"},{"name":"septation initiation defective","type":"exact"}],"termid":"FYPO:0007569"}


id: GO:0015004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete small blue copper electron carrier (obsolete GO:0015004)","synonyms":[{"name":"small blue copper electron carrier","type":"exact"}],"termid":"GO:0015004"}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: MONDO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute conjunctivitis that is characterized by bleeding into the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"},{"relation_name":"is_a","term_name":"viral conjunctivitis","termid":"MONDO:0043541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute hemorrhagic conjunctivitis","secondary_identifiers":["EFO:0007131","ICD9:077.4","MESH:D003232","MEDGEN:1094","NCIT:C34505","DOID:11227","SCTID:398264003","UMLS:C0009765"],"synonyms":[{"name":"Apollo disease","type":"exact"},{"name":"epidemic hemorrhagic conjunctivitis","type":"exact"},{"name":"viral conjunctivitis","type":"related"}],"termid":"MONDO:0005634","xrefs":{"Monarch":{"xref_id":"0005634"}}}


id: SO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a translocation, which is then a region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocaton_attribute","synonyms":[{"name":"translocation attribute","type":"exact"}],"termid":"SO:0001520"}


id: PBO:0031734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiosis","termid":"PBO:0031734"}


id: PBO:0086174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the maintenance of bud site selection; localizes; localization to the bud neck and previous sites of cell division (bud scars; cytokinesis remnants (CRMs)) is interdependent with Rax2p; required with Rax1p to anchor both Nba1p and Nis1p to CRMs where a Cdc42p inhibitory zone is established preventing repolarization of cells at previous division sites; RAX2 mRNA stability is regulated by Mpt5p; predicted type I membrane-spanning protein; N-glycosylated","termid":"PBO:0086174"}


id: PBO:0056030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte specific transcript 1","termid":"PBO:0056030"}


id: PBO:0049695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan and proteoglycan link protein 1","termid":"PBO:0049695"}


id: MONDO:1011755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sebaceous adenitis, non-human animal","secondary_identifiers":["OMIA:001563"],"termid":"MONDO:1011755","xrefs":{"Monarch":{"xref_id":"1011755"}}}


id: FYPO:0004313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to CENP-A containing chromatin","termid":"FYPO:0004311"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"decreased protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin","type":"exact"},{"name":"reduced protein localization to CENP-A containing chromatin","type":"exact"}],"termid":"FYPO:0004313"}


id: PBO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-phospholipase A2 activity regulator (predicted)","termid":"PBO:0001629"}


id: PBO:0062497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 1","termid":"PBO:0062497"}


id: _global:has_end_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"_global:has_part_that_occurs_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_location","secondary_identifiers":["RO:0002232"],"termid":"_global:has_end_location"}


id: PBO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active site residues absent","termid":"PBO:0003245"}


id: PBO:0053431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 376","termid":"PBO:0053431"}


id: GO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-bisphospho-D-glycerate + H2O = 3-phospho-D-glycerate + phosphate.","definition_xrefs":["PMID:8567632","PMID:9452443"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate 2-phosphatase activity (obsolete GO:0004083)","termid":"GO:0004083"}


id: PBO:0086727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YNL034W has a paralog, YNL018C, that arose from a segmental duplication","termid":"PBO:0086727"}


id: GO:1902572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:krc","GOC:TermGenie","PMID:20179351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine-type peptidase activity","synonyms":[{"name":"down regulation of serine protease activity","type":"narrow"},{"name":"down regulation of serine-type peptidase activity","type":"exact"},{"name":"down-regulation of serine protease activity","type":"narrow"},{"name":"down-regulation of serine-type peptidase activity","type":"exact"},{"name":"downregulation of serine protease activity","type":"narrow"},{"name":"downregulation of serine-type peptidase activity","type":"exact"},{"name":"inhibition of serine protease activity","type":"narrow"},{"name":"inhibition of serine-type peptidase activity","type":"narrow"},{"name":"negative regulation of serine protease activity","type":"narrow"}],"termid":"GO:1902572"}


id: FYPO:0002280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single cell division","synonyms":[{"name":"inviable following spore germination, single cell division","type":"exact"},{"name":"inviable germinated spore, single cell division","type":"exact"},{"name":"lethal after spore germination, single cell division","type":"exact"}],"termid":"FYPO:0002280"}


id: FYPO:0001424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to nucleus during vegetative growth","synonyms":[{"name":"abolished protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"nuclear exclusion during vegetative growth","type":"related"},{"name":"nuclear protein exclusion during vegetative growth","type":"related"},{"name":"protein localization to nucleus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001424"}


id: PBO:0054490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1890","termid":"PBO:0054490"}


id: MONDO:0018679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous plasmacytosis","secondary_identifiers":["GARD:21888","MEDGEN:1672491","Orphanet:451602","UMLS:C4736227","icd11.foundation:1669369613"],"termid":"MONDO:0018679","xrefs":{"Monarch":{"xref_id":"0018679"}}}


id: GO:1902912
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of pyruvate kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000088","PMID:24606918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyruvate kinase complex","termid":"GO:1902912"}


id: PBO:0078201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-3","termid":"PBO:0078201"}


id: GO:0031332
data:
  {"annotated_genes":["SJAG_03042","SJAG_03916","SJAG_02594","SJAG_03706","SJAG_02621","SJAG_04061"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64912],"is_not":false,"summary":null,"term":"GO:0031332"},{"annotations":[63003,89116,118385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033167"},{"annotations":[118391,112515,91607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"Any protein complex that mediates the effects of small interfering RNAs on gene expression. Most known examples contain one or more members of the Argonaute family of proteins.","definition_xrefs":["GOC:mah","PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_03042":null,"SJAG_03706":null,"SJAG_03916":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNAi effector complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0031332","terms_by_termid":{"GO:0030958":null,"GO:0031332":null,"GO:0033167":null}}


id: GO:0102673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty aldehyde + H2O + NAD+ = a fatty acid + 2 H+ + NADH.","definition_xrefs":["RHEA:49832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fatty aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-4142"],"synonyms":[{"name":"fatty aldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0102673"}


id: PBO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INHBA antisense RNA 1","termid":"PBO:0051679"}


id: GO:0160239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription halt following transcription initiation but prior to elongation, during which RNA polymerase II pauses approximately 20-60 nucleotides downstream of the transcriptional start site before proceeding into productive elongation. Transcription pausing starts following phosphorylation of the C-terminal domain (CTD) of RNA polymerase II subunit POLR2A at Ser-5 and stops following phosphorylation of POLR2A by the P-TEFb complex.","definition_xrefs":["PMID:33271312","PMID:35816930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription pausing by RNA polymerase II","synonyms":[{"name":"promoter proximal pausing by RNA polymerase II","type":"exact"}],"termid":"GO:0160239"}


id: GO:0032306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of prostaglandin secretion","synonyms":[{"name":"regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032306"}


id: PBO:0054786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2199","termid":"PBO:0054786"}


id: MONDO:0010562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colonic atresia is a congenital intestinal malformation resulting in a non-latent segment of the colon and characterized by lower intestinal obstruction manifesting with abdominal distention and failure to pass meconium in newborns.","definition_xrefs":["Orphanet:1198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic atresia","secondary_identifiers":["OMIM:303650","SCTID:37054000","MEDGEN:75605","NCIT:C101024","UMLS:C0266190","HP:0010448","MESH:C562562","GARD:1446"],"synonyms":[{"name":"atresia of colon","type":"exact"},{"name":"colon atresia","type":"exact"},{"name":"colonic atresia","type":"exact"},{"name":"colonic atresia (disease)","type":"exact"},{"name":"congenital atresia of colon","type":"exact"}],"termid":"MONDO:0010562","xrefs":{"Monarch":{"xref_id":"0010562"}}}


id: MONDO:0032824
data:
  {"annotated_genes":["SJAG_02776"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87362],"is_not":false,"summary":null,"term":"MONDO:0032824"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02776":null},"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231419","MEDGEN:1684749","OMIM:618590"],"synonyms":[{"name":"GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 21","type":"related"},{"name":"GPIBD21","type":"related"},{"name":"Neurodevelopmental Disorder With Brain Anomalies, Seizures, and Scoliosis","type":"related"}],"termid":"MONDO:0032824","terms_by_termid":{"MONDO:0032824":null},"xrefs":{"Monarch":{"xref_id":"0032824"}}}


id: FYPO:0006031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins later than normal.","definition_xrefs":["PMID:28481910","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitotic DNA replication initiation","synonyms":[{"name":"delayed mitotic DNA replication initiation","type":"exact"},{"name":"delayed onset of DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"delayed onset of DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006031"}


id: _global:is_magnitude_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_magnitude_of","termid":"_global:is_magnitude_of"}


id: PBO:0086567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR015W is not an essential gene","termid":"PBO:0086567"}


id: GO:0018492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: CO + H2O + acceptor = CO2 + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon-monoxide dehydrogenase (acceptor) activity (obsolete GO:0018492)","synonyms":[{"name":"carbon monoxide dehydrogenase activity","type":"broad"}],"termid":"GO:0018492"}


id: PBO:0057222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378j","termid":"PBO:0057222"}


id: GO:0003896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.","definition_xrefs":["PMID:11395402","GOC:mcc","PMID:26184436","PMID:38203225","PMID:38492718","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA primase activity (obsolete GO:0003896)","termid":"GO:0003896"}


id: GO:0046854
data:
  {"annotated_genes":["SJAG_04930","SJAG_03170","SJAG_05330","SJAG_04537","SJAG_03131","SJAG_04545","SJAG_02613","SJAG_00114","SJAG_00296","SJAG_01863","SJAG_01571","SJAG_00053","SJAG_00063","SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91557,93566,97029,111444,111566,118765],"is_not":false,"summary":null,"term":"GO:0046854"},{"annotations":[92180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[90750,104695],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[61809,63337,71787,61659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[117834],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol phosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00114":null,"SJAG_00296":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_02289":null,"SJAG_02613":null,"SJAG_03131":null,"SJAG_03170":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04930":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0046837"],"synonyms":[{"name":"PIP biosynthesis","type":"exact"},{"name":"PtdInsP biosynthesis","type":"exact"},{"name":"phosphatidylinositol phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol phosphate phosphorylation","type":"narrow"},{"name":"phosphatidylinositol phosphorylation","type":"related"},{"name":"phosphoinositide phosphorylation","type":"narrow"}],"termid":"GO:0046854","terms_by_termid":{"GO:0036092":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PBO:0091905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-galactosyltransferase Gma12","termid":"PBO:0091905"}


id: GO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis usually resulting in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.","definition_xrefs":["PMID:12062082","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in gastrulation","termid":"GO:0060027"}


id: PBO:0054425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1821","termid":"PBO:0054425"}


id: PBO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 27","termid":"PBO:0072150"}


id: PBO:0045675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNC1LI2 divergent transcript","termid":"PBO:0045675"}


id: SO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA that is transcribed from a long terminal repeat.","definition_xrefs":["PomBase:mh","PMID:24256266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long_terminal_repeat_transcript","synonyms":[{"name":"LTR transcript","type":"exact"},{"name":"long terminal repeat transcript","type":"exact"}],"termid":"SO:0002208"}


id: GO:0006134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrobiopterin reduction (obsolete GO:0006134)","synonyms":[{"name":"dihydrobiopterin reduction","type":"exact"}],"termid":"GO:0006134"}


id: PBO:0068937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 180, pseudogene","termid":"PBO:0068937"}


id: GO:0030894
data:
  {"annotated_genes":["SJAG_05197","SJAG_04150","SJAG_02172","SJAG_04877","SJAG_05239","SJAG_02182","SJAG_00272","SJAG_02627","SJAG_03722","SJAG_03855","SJAG_00814","SJAG_01010","SJAG_01698","SJAG_00729","SJAG_00863","SJAG_03780","SJAG_04994","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75650,70766,73207,75357],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[71380,103140,77249,75382],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[80641,116549,77501],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[78037,72945,77510,113132,69178,76772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[112817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043601"}]},"cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the replication fork which mediates DNA replication. Includes DNA primase, one or more DNA polymerases, DNA helicases, and other proteins.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"replication fork","termid":"GO:0005657"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01698":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04877":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"replisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Replisome"],"synonyms":[{"name":"DNA synthesome complex","type":"related"},{"name":"RC complex","type":"related"},{"name":"replication-competent complex","type":"related"}],"termid":"GO:0030894","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: PBO:0018082
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutants lacking primase activity fail to complement S. cerevisiae MCM10 deletion","termid":"PBO:0018082"}


id: GO:0034743
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC) and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP complex","termid":"GO:0034743"}


id: SO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which decreases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_translational_product_level","synonyms":[{"name":"decrease translational product level","type":"exact"}],"termid":"SO:0001555"}


id: FYPO:0006892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which inositol hexakisphosphate kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished inositol hexakisphosphate kinase activity","synonyms":[{"name":"inositol hexakisphosphate kinase activity abolished","type":"exact"}],"termid":"FYPO:0006892"}


id: PBO:0072915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class A member 5","termid":"PBO:0072915"}


id: PBO:0053155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase C","termid":"PBO:0053155"}


id: MONDO:0006953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mother develops antibodies against red blood cell Rhesus antigens. This may lead to potential fetal adverse outcomes such as anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood group incompatibility","termid":"MONDO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Rh isoimmunization","secondary_identifiers":["DOID:4175","EFO:1001159","MEDGEN:11224","UMLS:C0035404","MedDRA:10039016","SCTID:44795003"],"synonyms":[{"name":"Rh incompatibility affecting management of mother","type":"exact"}],"termid":"MONDO:0006953","xrefs":{"Monarch":{"xref_id":"0006953"}}}


id: PBO:0034391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-relation_between_structure_and_stage","termid":"PBO:0034391"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: FYPO:0003001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more actin filaments than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"actin filaments present in increased numbers","synonyms":[{"name":"actin filaments present in greater numbers","type":"exact"},{"name":"extra actin filaments","type":"exact"},{"name":"increased level of actin filaments","type":"exact"},{"name":"increased number of actin filaments","type":"exact"}],"termid":"FYPO:0003001"}


id: MONDO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is characterized by elevated serum IgE, dermatitis, and respiratory infections.","definition_xrefs":["NCIT:C3144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperimmunoglobulin syndrome","termid":"MONDO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgE syndrome","secondary_identifiers":["Orphanet:331223","NANDO:2200713","MEDGEN:854488","OMIMPS:147060","UMLS:C3887645","GARD:10956","NANDO:1200340","DOID:0080545","icd11.foundation:223461798"],"synonyms":[{"name":"HIES","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome","type":"exact"},{"name":"hyperimmunoglobulin E syndrome","type":"exact"}],"termid":"MONDO:0018037","xrefs":{"Monarch":{"xref_id":"0018037"}}}


id: GO:0007099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which a daughter centriole is formed perpendicular to an existing centriole. An immature centriole contains a ninefold radially symmetric array of single microtubules; mature centrioles consist of a radial array of nine microtubule triplets, doublets, or singlets depending upon the species and cell type. Duplicated centrioles also become the ciliary basal body in cells that form cilia during G0.","definition_xrefs":["ISBN:0815316194","GOC:kmv","PMID:9889124","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"centriole assembly","termid":"GO:0098534"},{"relation_name":"part_of","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0044085","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"centriole replication","secondary_identifiers":["GO:0032054"],"synonyms":[{"name":"centriole duplication","type":"exact"},{"name":"ciliary basal body duplication","type":"related"},{"name":"microtubule basal body duplication","type":"broad"}],"termid":"GO:0007099"}


id: PBO:0034124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spatially_coextensive_with","termid":"PBO:0034124"}


id: PBO:0055228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2654","termid":"PBO:0055228"}


id: MONDO:0018972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of stomach (obsolete MONDO:0018972)","secondary_identifiers":["Orphanet:63443"],"synonyms":[{"name":"rare gastric epithelial tumor","type":"exact"}],"termid":"MONDO:0018972","xrefs":{"Monarch":{"xref_id":"0018972"}}}


id: GO:0004447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O.","definition_xrefs":["RHEA:23336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"iodide peroxidase activity","secondary_identifiers":["EC:1.11.1.8","MetaCyc:IODIDE-PEROXIDASE-RXN"],"synonyms":[{"name":"TPO activity","type":"related"},{"name":"iodinase activity","type":"related"},{"name":"thyroid peroxidase activity","type":"related"},{"name":"thyroperoxidase activity","type":"related"}],"termid":"GO:0004447"}


id: MONDO:0020477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progeria-associated arthropathy","secondary_identifiers":["Orphanet:99706"],"termid":"MONDO:0020477","xrefs":{"Monarch":{"xref_id":"0020477"}}}


id: GO:0018913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete anaerobic ethylbenzene metabolic process (obsolete GO:0018913)","synonyms":[{"name":"anaerobic ethylbenzene metabolism","type":"exact"}],"termid":"GO:0018913"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: GO:0015064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An opsin with maximal absorption below 400 nm.","definition_xrefs":["PMID:10594055"],"gene_count":0,"genotype_count":0,"name":"obsolete UV-sensitive opsin (obsolete GO:0015064)","synonyms":[{"name":"UV-sensitive opsin","type":"exact"}],"termid":"GO:0015064"}


id: PR:O60132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea4 gene.","definition_xrefs":["UniProtKB:O60132","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein Tea4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1706.01","synonyms":[{"name":"Spom972h-tea4","type":"exact"},{"name":"cell polarity protein tea4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"win1-interacting SH3 domain protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60132"}


id: MONDO:0015614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis herpetiformis (DH) is a chronic autoimmune subepidermal bullous disease characterized by grouped pruritic lesions such as papules, urticarial plaques, erythema, and herpetiform vesiculae, with a predominantly symmetrical distribution on extensor surfaces of the elbows (90%), knees (30%), shoulders, buttocks, sacral region, and face of children and adults. Erosions, excoriations and hyperpigmentation usually follow. DH may also appear as a consequence of gluten intolerance.","definition_xrefs":["Orphanet:1656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"dermatitis herpetiformis","secondary_identifiers":["UMLS:C0011608","GARD:10075","EFO:1000684","Wikipedia:Dermatitis_herpetiformis","ICD10CM:L13.0","icd11.foundation:286313127","NCIT:C26742","MedDRA:10012468","MEDGEN:8327","ICD9:694.0","DOID:8505","MESH:D003874","SCTID:111196000"],"synonyms":[{"name":"Duhring's disease","type":"exact"},{"name":"Durhing-Brocq disease","type":"exact"},{"name":"dermatitis herpetiformis","type":"exact"},{"name":"dermatosis herpetiformis","type":"exact"}],"termid":"MONDO:0015614","xrefs":{"Monarch":{"xref_id":"0015614"}}}


id: GO:0072558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of two components, NLRP1 (NALP1) and caspase-1 or caspase-5. The exact mechanisms of NLRP1 activation remain obscure, but potassium ion efflux appears to be essential.","definition_xrefs":["GOC:vp","GOC:BHF","GOC:add","PMID:20303873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"NLRP1 inflammasome complex","synonyms":[{"name":"NALP1 inflammasome complex","type":"exact"}],"termid":"GO:0072558"}


id: FYPO:0007212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at heterochromatin islands is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at heterochromatin island","synonyms":[{"name":"decreased chromatin silencing at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at heterochromatin island during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at heterochromatin island","type":"exact"}],"termid":"FYPO:0007212"}


id: PBO:0005721
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.2","termid":"PBO:0005721"}


id: PBO:0069548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 819, pseudogene","termid":"PBO:0069548"}


id: PBO:0027361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_echinocandin","termid":"PBO:0027361"}


id: PATO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being arranged in two opposite rows (and hence in the same plane).","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichous","termid":"PATO:0001952"}


id: PBO:0044868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND2B antisense RNA 1","termid":"PBO:0044868"}


id: GO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation involved in immune response","synonyms":[{"name":"T cell development involved in immune response","type":"related"},{"name":"T cell differentiation during immune response","type":"related"},{"name":"T lymphocyte differentiation during immune response","type":"related"},{"name":"T-cell differentiation during immune response","type":"related"},{"name":"T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002292"}


id: PBO:0084181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone and assembly chaperone for Rps6a/b; involved in histone exchange, replacing histone H2A-H2B dimers or histone variant dimers from assembled nucleosomes; promotes solubility of Rps6a, and 40S ribosomal subunit biogenesis; role in transport of H2A and H2B histones to the nucleus; regulates microtubule dynamics during mitosis; interacts with mitotic cyclin Clb2p; controls bud morphogenesis; phosphorylated by CK2; protein abundance increases in response to DNA replication stress","termid":"PBO:0084181"}


id: MONDO:0018529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of Torsin-1A-interacting protein 1 (obsolete MONDO:0018529)","secondary_identifiers":["Orphanet:424925"],"synonyms":[{"name":"qualitative or quantitative defects of Torsin-1A-interacting protein type 1","type":"exact"}],"termid":"MONDO:0018529","xrefs":{"Monarch":{"xref_id":"0018529"}}}


id: GO:0021729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:cls","GOC:curators","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior reticular formation development","termid":"GO:0021729"}


id: PBO:0047377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 8","termid":"PBO:0047377"}


id: PBO:0028815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_amine_oxidase_activity","termid":"PBO:0028815"}


id: PBO:0079177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 6, pseudogene","termid":"PBO:0079177"}


id: PR:O74791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein-like 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase grn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.08c","secondary_identifiers":["UniProtKB:O74791"],"synonyms":[{"name":"GTPase in ribosomal export from the nucleolus protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GNL3","type":"exact"},{"name":"nuclear GTP-binding protein grn1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74791"}


id: PBO:0066922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 224","termid":"PBO:0066922"}


id: PBO:0112003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein Qcr6","termid":"PBO:0112003"}


id: PBO:0039496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A19, pseudogene","termid":"PBO:0039496"}


id: PBO:0064407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 2","termid":"PBO:0064407"}


id: PR:000037032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 3 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC10F6.09c","synonyms":[{"name":"Spom-psm3","type":"exact"},{"name":"cohesin complex Psm3 subunit (Schizosaccharomyces pombe)","type":"exact"},{"name":"structural maintenance of chromosomes protein 3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000037032"}


id: GO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"peribacteroid membrane","termid":"GO:0043661"}


id: MONDO:0008300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prader-Willi syndrome is a rare genetic disorder characterized by hypothalamic-pituitary abnormalities with severe hypotonia during the neonatal period and first two years of life and the onset of hyperphagia with a risk of morbid obesity during infancy and adulthood, learning difficulties and behavioral problems or severe psychiatric problems.","definition_xrefs":["Orphanet:739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome","secondary_identifiers":["MESH:D011218","MedDRA:10036476","GARD:5575","MEDGEN:46057","ICD9:759.81","icd11.foundation:393773440","NANDO:2200411","NCIT:C75463","OMIM:176270","SCTID:89392001","NANDO:1200678","UMLS:C0032897","DOID:11983","NORD:1602"],"synonyms":[{"name":"PWS","type":"related"},{"name":"Prader Willi syndrome","type":"exact"},{"name":"Prader-Labhart-Willi syndrome","type":"exact"},{"name":"Prader-Willi syndrome","type":"exact"},{"name":"Prader-Willi syndrome chromosome region","type":"related"},{"name":"Prader-Willi-Labhart syndrome","type":"exact"},{"name":"Prader-Willi-like syndrome associated with chromosome 6","type":"related"},{"name":"Willi-Prader syndrome","type":"exact"},{"name":"obesity, muscular hypotonia, intellectual disability, short stature, hypogonadotropic hypogonadism, and small hands and feet","type":"related"},{"name":"obesity, muscular hypotonia, mental retardation, short stature, hypogonadotropic hypogonadism, and small hands and feet","type":"related"}],"termid":"MONDO:0008300","xrefs":{"Monarch":{"xref_id":"0008300"}}}


id: GO:0018403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Dermatan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.","definition_xrefs":["PMID:7338506","RESID:AA0209"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-dermatan sulfate linkage via dermatan 4-sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine (obsolete GO:0018403)","synonyms":[{"name":"protein-dermatan sulphate linkage via dermatan 4-sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"}],"termid":"GO:0018403"}


id: GO:0044066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cell nucleus.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell nucleus","synonyms":[{"name":"disruption by symbiont of host cell nucleus","type":"exact"},{"name":"modification by symbiont of host cell nucleus","type":"related"},{"name":"modification by symbiont of host nucleus","type":"exact"},{"name":"modification of host cell nucleus by symbiont","type":"exact"},{"name":"modification of host nucleus by symbiont","type":"exact"}],"termid":"GO:0044066"}


id: FYECO:0000005
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- 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assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_04522","SJAG_01205","SJAG_02621","SJAG_03689","SJAG_02266","SJAG_04280","SJAG_04574","SJAG_03118","SJAG_00028","SJAG_02392","SJAG_01143","SJAG_01680","SJAG_02668","SJAG_03596"],"name":"standard 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degrees Celsius","type":"narrow"},{"name":"26 degrees Celsius","type":"narrow"},{"name":"27 degrees Celsius","type":"narrow"},{"name":"28 degrees Celsius","type":"narrow"},{"name":"29 degrees Celsius","type":"narrow"},{"name":"30 degrees Celsius","type":"narrow"},{"name":"31 degrees Celsius","type":"narrow"},{"name":"32 degrees Celsius","type":"narrow"},{"name":"normal temperature","type":"exact"}],"termid":"FYECO:0000005","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000015":null,"FYECO:0000081":null,"FYECO:0000102":null,"FYECO:0000103":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0120341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 2 (RS2) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["PMID:22754630","GOC:krc","PMID:25694453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"radial spoke base 2","termid":"GO:0120341"}


id: PBO:0047092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member D","termid":"PBO:0047092"}


id: PBO:0054990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2404","termid":"PBO:0054990"}


id: GO:1902485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-cysteine.","definition_xrefs":["PMID:12941942","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-cysteine binding","termid":"GO:1902485"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: PBO:0063887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P","termid":"PBO:0063887"}


id: PBO:0047417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 8","termid":"PBO:0047417"}


id: PATO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a cell or blood vessel or capillary by virtue of the bearer's being in a rigid state of fullness resulting from pressure of the contents against the wall or membrane.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"turgor","termid":"PATO:0001620"}


id: GO:0050866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell activation","synonyms":[{"name":"down regulation of cell activation","type":"exact"},{"name":"down-regulation of cell activation","type":"exact"},{"name":"downregulation of cell activation","type":"exact"},{"name":"inhibition of cell activation","type":"narrow"}],"termid":"GO:0050866"}


id: MONDO:0021203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-suppurative otitis media","termid":"MONDO:0001212"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous otitis media","secondary_identifiers":["MEDGEN:75752","SCTID:80327007","UMLS:C0271453"],"synonyms":[{"name":"SOM","type":"exact"},{"name":"otitis media with effusion","type":"related"},{"name":"secretory otitis media","type":"exact"}],"termid":"MONDO:0021203","xrefs":{"Monarch":{"xref_id":"0021203"}}}


id: GO:0019333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reduction of nitrate to dinitrogen by four reactions; each intermediate is transformed to the next lower oxidation state; also part of cellular bioenergetics; the nitrogen compounds can serve as terminal acceptors for electron transport phosphorylation in place of oxygen.","definition_xrefs":["MetaCyc:DENITRIFICATION-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0008150","GO:0071941"],"is_obsolete":false,"name":"denitrification pathway","termid":"GO:0019333"}


id: MOD:01241
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(2)H labeled L-aspartic acid 4-methyl ester.","definition_xrefs":["OMSSA:19","Unimod:298#D","PubMed:12185208"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-aspartic acid 4-methyl ester","termid":"MOD:01181"},{"relation_name":"is_a","term_name":"3x(2)H residue methyl ester","termid":"MOD:00617"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-aspartic acid 4-methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"deuterated methyl ester","type":"related"},{"name":"trideuteromethyld","type":"exact"}],"termid":"MOD:01241"}


id: MOD:01317
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:12216740","Unimod:178#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation to amine thiol","termid":"MOD:00535"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to amine thiol - site T","synonyms":[{"name":"DAET","type":"related"},{"name":"phosphorylation to amine thiol","type":"related"}],"termid":"MOD:01317"}


id: PBO:0076814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 2","termid":"PBO:0076814"}


id: PBO:0087255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in regulation of ion transport across plasma membrane; carboxyl terminus is essential for glucose-dependent Pma1p activation via phosphorylation of Pma1p-Ser899; enhances spermine uptake; PTK2 has a paralog, PTK1, that arose from the whole genome duplication","termid":"PBO:0087255"}


id: PBO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YKR079C","termid":"PBO:0000514"}


id: PBO:0072058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 28","termid":"PBO:0072058"}


id: PBO:0073969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 18","termid":"PBO:0073969"}


id: PBO:0084637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mevalonate kinase; acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate; human MVK functionally complements the lethality of the erg12 null mutation","termid":"PBO:0084637"}


id: SO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoregulated","termid":"SO:0000471"}


id: MONDO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the fallopian tube and originates from mesothelial cells. It is characterized by the presence of gland-like structures that are lined by flat or cuboidal cells. It is usually discovered as an incidental finding.","definition_xrefs":["NCIT:C40129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"adenomatoid tumor","termid":"MONDO:0004230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube adenomatoid tumor","secondary_identifiers":["UMLS:C1517110","DOID:5196","MEDGEN:273291"],"synonyms":[{"name":"fallopian tube adenomatoid tumor","type":"exact"}],"termid":"MONDO:0003328","xrefs":{"Monarch":{"xref_id":"0003328"}}}


id: FYPO:0007046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent during a cellular response to zinc ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished alkaline phosphatase activity","termid":"FYPO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity during cellular response to zinc ion starvation","synonyms":[{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion depletion","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion deprivation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion limitation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc starvation","type":"exact"},{"name":"alkaline phosphatase activity abolished during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007046"}


id: PBO:0062207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AC member 2","termid":"PBO:0062207"}


id: MONDO:0100178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, susceptibility to","secondary_identifiers":["OMIMPS:603165"],"termid":"MONDO:0100178","xrefs":{"Monarch":{"xref_id":"0100178"}}}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: MONDO:0010936
data:
  {"annotated_genes":["SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85680],"is_not":false,"summary":null,"term":"MONDO:0010936"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the CHMP2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15322","MESH:C563708","MESH:C579991","DOID:0111227","DOID:0060208","ICD9:331.19","MEDGEN:318833","SCTID:702393003","UMLS:C1833296","OMIM:600795","OMIM:614696"],"synonyms":[{"name":"CHMP2B amyotrophic lateral sclerosis","type":"exact"},{"name":"CHMP2B-related amyotrophic lateral sclerosis","type":"exact"},{"name":"Dmt1","type":"related"},{"name":"FTD3","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in CHMP2B","type":"exact"},{"name":"amyotrophic lateral sclerosis, Chmp2B-related","type":"exact"},{"name":"dementia, familial nonspecific","type":"related"},{"name":"frontotemporal dementia, chromosome 3-linked","type":"exact"}],"termid":"MONDO:0010936","terms_by_termid":{"MONDO:0010936":null},"xrefs":{"Monarch":{"xref_id":"0010936"}}}


id: MONDO:0008106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 2, congenital, autosomal dominant","secondary_identifiers":["MESH:C537854","MEDGEN:331657","DOID:0111792","UMLS:C1834079","OMIM:164100"],"synonyms":[{"name":"NYS2","type":"exact"},{"name":"NYSTAGMUS 2, congenital, autosomal dominant","type":"related"},{"name":"Nystagmus congenital, motor 2","type":"related"},{"name":"Nystagmus, congenital motor, 2","type":"related"}],"termid":"MONDO:0008106","xrefs":{"Monarch":{"xref_id":"0008106"}}}


id: PR:Q9Y719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok13 gene.","definition_xrefs":["UniProtKB:Q9Y719","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.05","synonyms":[{"name":"Spom972h-mok13","type":"exact"}],"termid":"PR:Q9Y719"}


id: GO:0102887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-sesquiphellandrene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.123","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"beta-sesquiphellandrene synthase activity","secondary_identifiers":["RHEA:32699","MetaCyc:RXN-8430"],"termid":"GO:0102887"}


id: PATO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"soluble in","termid":"PATO:0001537"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased solubility","synonyms":[{"name":"high solubility","type":"exact"}],"termid":"PATO:0001663"}


id: MONDO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Form of leukemia characterized by an uncontrolled proliferation of the myeloid lineage and their precursors (myeloid progenitor cells) in the bone marrow and other sites.","definition_xrefs":["MESH:D007951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"monocytic leukemia","termid":"MONDO:0004600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"chronic monocytic leukemia","secondary_identifiers":["ICD9:206.11","NCIT:C34774","SCTID:188745007","DOID:8593","MEDGEN:9729","ICD9:206.10","ICD9:206.1","UMLS:C0023466"],"synonyms":[{"name":"monocytic leukemia, chronic","type":"exact"}],"termid":"MONDO:0004614","xrefs":{"Monarch":{"xref_id":"0004614"}}}


id: PBO:0055656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3096","termid":"PBO:0055656"}


id: GO:0010022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a meristem becomes determinate (i.e. ceases to produce lateral organs and may or may not terminally differentiate).","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem determinacy","termid":"GO:0010022"}


id: GO:0044200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the host nucleus and form the nuclear envelope; excludes the intermembrane space.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell nuclear envelope","termid":"GO:0044199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear membrane","termid":"GO:0044200"}


id: SO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary between an intron and an exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_junction","synonyms":[{"name":"splice boundary","type":"exact"},{"name":"splice junction","type":"exact"}],"termid":"SO:0001421"}


id: PBO:0085388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085388"}


id: GO:0046487
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105412,101350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyoxylate, the anion of glyoxylic acid, HOC-COOH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glyoxylate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glyoxylate metabolism","type":"exact"}],"termid":"GO:0046487","terms_by_termid":{"GO:0009436":null}}


id: MOD:01486
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532#N-term","OMSSA:167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ114nterm","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01486"}


id: GO:1904759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an equatorial microtubule organizing center.","definition_xrefs":["GO_REF:0000087","PMID:16611237","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to equatorial microtubule organizing center","synonyms":[{"name":"protein localisation in equatorial microtubule organizing center","type":"exact"},{"name":"protein localisation to equatorial microtubule organizing center","type":"exact"},{"name":"protein localization in equatorial microtubule organizing center","type":"exact"},{"name":"protein localization to eMTOC","type":"exact"}],"termid":"GO:1904759"}


id: PBO:0029242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_repression_of_transcription_during_cellular_response_to_zinc","termid":"PBO:0029242"}


id: PBO:0029438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029438"}


id: PBO:0085880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; interacts weakly with Knr4p; YMR262W is not an essential gene","termid":"PBO:0085880"}


id: GO:0012509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances within the Golgi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"},{"relation_name":"part_of","term_name":"COPI-coated inter-Golgi transport vesicle","termid":"GO:0030143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"inter-Golgi transport vesicle membrane","synonyms":[{"name":"inter-Golgi transport constitutive secretory pathway transport vesicle membrane","type":"exact"}],"termid":"GO:0012509"}


id: GO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin and contributing to cardiac muscle cell fate commitment. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_heart","PMID:17576928"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:0061317)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:0061317"}


id: MONDO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by craniofacial dysmorphism (midface hypoplasia, depressed nasal bridge, small nose with upturned tip, cleft palate, Pierre Robin sequence), bilateral, pronounced sensorineural hearing loss, and skeletal/joint anomalies (including spondyloepiphyseal dysplasia, arthralgia/arthropathy), in the absence of ocular abnormalities.","definition_xrefs":["Orphanet:166100"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Stickler syndrome","termid":"MONDO:0019354"},{"relation_name":"is_a","term_name":"otospondylomegaepiphyseal dysplasia","termid":"MONDO:0008975"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"otospondylomegaepiphyseal dysplasia, autosomal dominant","secondary_identifiers":["GARD:5021","MESH:C537494","NORD:1533","SCTID:4602007","OMIM:277610","Orphanet:3450","OMIM:184840","DOID:0080677","MEDGEN:341234","UMLS:C1848488","SCTID:699313003","MESH:C535776","DOID:4258"],"synonyms":[{"name":"COL11A2 Stickler syndrome","type":"exact"},{"name":"OSMED, Heterozygous","type":"exact"},{"name":"OSMED, heterozygous","type":"exact"},{"name":"OSMEDA","type":"exact"},{"name":"Piere-Robin syndrome","type":"exact"},{"name":"Pierre Robin malformation","type":"exact"},{"name":"Pierre Robin sequence-fetal chondrodysplasia syndrome","type":"exact"},{"name":"Pierre Robin syndrome with fetal chondrodysplasia","type":"exact"},{"name":"Pierre Robin syndrome with fetal chondrodysplasia Stickler syndrome, Nonocular type","type":"exact"},{"name":"Pierre Robin syndrome with fetal chondrodysplasia Stickler syndrome, Nonocular type, formerly","type":"exact"},{"name":"Pierre Robin syndrome with foetal chondrodysplasia","type":"exact"},{"name":"Pierre Robin syndrome with foetal chondrodysplasia Stickler syndrome, Nonocular type","type":"exact"},{"name":"Pierre Robin syndrome with foetal chondrodysplasia Stickler syndrome, Nonocular type, formerly","type":"exact"},{"name":"Pierre Robin syndrome-fetal chondrodysplasia syndrome","type":"exact"},{"name":"STICKLER syndrome, type III","type":"exact"},{"name":"STL3","type":"exact"},{"name":"Stickler syndrome caused by mutation in COL11A2","type":"exact"},{"name":"Stickler syndrome nonocular type","type":"related"},{"name":"Stickler syndrome, Nonocular type","type":"related"},{"name":"Stickler syndrome, non-ocular type","type":"exact"},{"name":"Stickler syndrome, type 3","type":"exact"},{"name":"Stickler syndrome, type III, formerly","type":"exact"},{"name":"WZS","type":"exact"},{"name":"Weissenbacher- Zweymuller syndrome","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome","type":"exact"},{"name":"Weissenbacher-Zweymüller syndrome","type":"related"},{"name":"heterozygous OSMED","type":"exact"},{"name":"heterozygous otospondylomegaepiphyseal dysplasia","type":"exact"},{"name":"otospondylomegaepiphyseal dysplasia, autosomal dominant","type":"exact"}],"termid":"MONDO:0008490","xrefs":{"Monarch":{"xref_id":"0008490"}}}


id: GO:0098541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the trans-Golgi network transport vesicle membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of transport vesicle membrane","termid":"GO:0098539"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle membrane","termid":"GO:0012510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of trans-Golgi network transport vesicle membrane","synonyms":[{"name":"external side of trans-Golgi network transport vesicle membrane","type":"exact"}],"termid":"GO:0098541"}


id: PBO:0070833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 12","termid":"PBO:0070833"}


id: PBO:0004076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga5","termid":"PBO:0004076"}


id: PBO:0079805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B26, pseudogene","termid":"PBO:0079805"}


id: GO:0019484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"beta-alanine metabolic process","termid":"GO:0019482"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"beta-alanine catabolic process","synonyms":[{"name":"beta-alanine breakdown","type":"exact"},{"name":"beta-alanine catabolism","type":"exact"},{"name":"beta-alanine degradation","type":"exact"}],"termid":"GO:0019484"}


id: PBO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_at_hotspot","termid":"PBO:0034571"}


id: PBO:0043515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 4","termid":"PBO:0043515"}


id: GO:0009530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell wall that is still able to expand, permitting cell growth. Primary cell walls contain more pectin than secondary walls and no lignin is present.","definition_xrefs":["GOC:jid","PMID:9442872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"primary cell wall","termid":"GO:0009530"}


id: PBO:0077639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 3","termid":"PBO:0077639"}


id: GO:2000516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}


id: PBO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family","termid":"PBO:0001292"}


id: PBO:0090912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex Rab GEF subunit Bet5","termid":"PBO:0090912"}


id: GO:1902816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to microtubule","synonyms":[{"name":"regulation of protein localisation to microtubule","type":"exact"}],"termid":"GO:1902816"}


id: GO:1905636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["PMID:23675531","GOC:PARL","GO_REF:0000059","GOC:bc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"},{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA polymerase II regulatory region sequence-specific DNA binding","synonyms":[{"name":"activation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"up regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"up-regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"upregulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"}],"termid":"GO:1905636"}


id: PBO:0031874
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion Bleomycin Sensitive","termid":"PBO:0031874"}


id: PBO:0061493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nik related kinase","termid":"PBO:0061493"}


id: GO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"specification of animal organ identity","termid":"GO:0010092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ induction","synonyms":[{"name":"induction of an organ","type":"exact"}],"termid":"GO:0001759"}


id: GO:0006104
data:
  {"annotated_genes":["SJAG_03813","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72109,90256],"is_not":false,"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving succinyl-CoA, a compound composed of the monovalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"succinyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"succinyl-CoA metabolism","type":"exact"}],"termid":"GO:0006104","terms_by_termid":{"GO:0006104":null}}


id: PBO:0074188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 9","termid":"PBO:0074188"}


id: PBO:0043207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B","termid":"PBO:0043207"}


id: PBO:0063424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4C","termid":"PBO:0063424"}


id: GO:0014802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"terminal cisterna","secondary_identifiers":["Wikipedia:Terminal_cisterna"],"termid":"GO:0014802"}


id: PBO:0046294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 3","termid":"PBO:0046294"}


id: PR:Q9USZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USZ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein end3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.02c","synonyms":[{"name":"Spom972h-end3","type":"exact"},{"name":"endocytosis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ7"}


id: PBO:0004616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4 (predicted)","termid":"PBO:0004616"}


id: GO:0052046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by one of the organisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via secreted substance (obsolete GO:0052046)","synonyms":[{"name":"modification of host morphology or physiology via effector molecule","type":"narrow"},{"name":"modification of host morphology or physiology via ellicitor","type":"narrow"}],"termid":"GO:0052046"}


id: FYPO:0007619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin during cellular response to oxidative stress","synonyms":[{"name":"normal protein localisation to chromatin during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during oxidative stress response","type":"exact"}],"termid":"FYPO:0007619"}


id: PBO:0066448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 1 homolog","termid":"PBO:0066448"}


id: MONDO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Catecholamine-producing tumors may arise in the adrenal medulla (pheochromocytomas) or in extraadrenal chromaffin cells (secreting paragangliomas).","definition_xrefs":["Orphanet:717"],"gene_count":0,"genotype_count":0,"name":"obsolete catecholamine-producing tumor (obsolete MONDO:0019116)","termid":"MONDO:0019116","xrefs":{"Monarch":{"xref_id":"0019116"}}}


id: PBO:0065288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 3","termid":"PBO:0065288"}


id: MONDO:0859749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphomatoid granulomatosis that is characterized by the presence of aggregates of neoplastic large B-lymphocytes, usually admixed with pleomorphic and Hodgkin-like cells, in a background of chronic inflammation. Necrotic changes are present and are usually extensive.","definition_xrefs":["DOID:0081310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphomatoid granulomatosis","termid":"MONDO:0019466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"grade III lymphomatoid granulomatosis","secondary_identifiers":["MEDGEN:78928","NCIT:C7933","UMLS:C0279067"],"termid":"MONDO:0859749","xrefs":{"Monarch":{"xref_id":"0859749"}}}


id: GO:0071500
data:
  {"annotated_genes":["SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102539],"is_not":false,"summary":null,"term":"GO:0071500"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrosative stress","termid":"GO:0051409"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrosative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071500","terms_by_termid":{"GO:0071500":null}}


id: GO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate commitment","termid":"GO:0046552"}


id: PBO:0062866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 4","termid":"PBO:0062866"}


id: PR:O59834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05024","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.14c","secondary_identifiers":["UniProtKB:O59834"],"synonyms":[{"name":"Spom972h-tadA","type":"exact"},{"name":"cytosine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59834"}


id: PBO:0070971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 9","termid":"PBO:0070971"}


id: MONDO:0010057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, Ryukyuan type","secondary_identifiers":["MESH:C536881","OMIM:271200","UMLS:C1849102","MEDGEN:376517","GARD:9646"],"synonyms":[{"name":"Ryukyuan muscular atrophy","type":"related"},{"name":"spinal muscular atrophy Ryukyuan type","type":"related"},{"name":"spinal muscular atrophy, Ryukyuan type","type":"exact"}],"termid":"MONDO:0010057","xrefs":{"Monarch":{"xref_id":"0010057"}}}


id: PR:O13652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfi1 gene.","definition_xrefs":["UniProtKB:O13652","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.05c","synonyms":[{"name":"Spom972h-sfi1","type":"exact"},{"name":"suppressor of fermentation induced loss of stress resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13652"}


id: GO:1903008
data:
  {"annotated_genes":["SJAG_00188","SJAG_02746","SJAG_03345","SJAG_01074","SJAG_01497","SJAG_00898","SJAG_04862","SJAG_03428","SJAG_02096","SJAG_03106","SJAG_05000","SJAG_03232","SJAG_04283","SJAG_03189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114714],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[75855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[103448,75725,105961,64521,76966,116390,78569,70208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"},{"annotations":[71029,103928,74892,105026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032790"}]},"cv_name":"biological_process","definition":"The disaggregation of an organelle into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_03345":null,"SJAG_03428":null,"SJAG_04283":null,"SJAG_04862":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"organelle degradation","type":"exact"}],"termid":"GO:1903008","terms_by_termid":{"GO:0032790":null,"GO:0051228":null,"GO:0072344":null,"GO:0140708":null}}


id: GO:0102907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + sesquisabinene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sesquisabinene synthase activity (obsolete GO:0102907)","termid":"GO:0102907"}


id: PATO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's rate of doing work.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Power"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"power","termid":"PATO:0001024"}


id: MONDO:0005041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma","secondary_identifiers":["icd11.foundation:499924848","MEDGEN:42224","SCTID:23986001","HP:0000501","MESH:D005901","ICD9:365.9","UMLS:C0017601","ICD10CM:H40-H42","ICD9:365","DOID:1686","ICD9:365.89","NCIT:C26782"],"synonyms":[{"name":"glaucoma","type":"exact"},{"name":"glaucoma (disease)","type":"exact"}],"termid":"MONDO:0005041","xrefs":{"Monarch":{"xref_id":"0005041"}}}


id: PBO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity protein kinase Lkh1","termid":"PBO:0000516"}


id: MONDO:0021208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine alopecia","secondary_identifiers":["UMLS:C0002176","ICD9:704.09","MEDGEN:507423","SCTID:54539003"],"termid":"MONDO:0021208","xrefs":{"Monarch":{"xref_id":"0021208"}}}


id: MOD:00090
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to L-alanine amide.","definition_xrefs":["PubMed:2069951","RESID:AA0081","PubMed:8472537","PubMed:952951","PubMed:1377792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine amide","synonyms":[{"name":"(2S)-2-aminopropanamide","type":"exact"},{"name":"AlaN","type":"exact"},{"name":"L-alanine amide","type":"exact"},{"name":"MOD_RES Alanine amide","type":"exact"},{"name":"alaninamide","type":"exact"},{"name":"amidated L-alanine","type":"exact"}],"termid":"MOD:00090"}


id: GO:0050140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferrocytochrome + nitrate = ferricytochrome + nitrite.","definition_xrefs":["RHEA:12909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor","termid":"GO:0016677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitrate reductase (cytochrome) activity","secondary_identifiers":["EC:1.9.6.1","MetaCyc:NITRATE-REDUCTASE-CYTOCHROME-RXN"],"synonyms":[{"name":"benzyl viologen-nitrate reductase activity","type":"related"},{"name":"ferrocytochrome:nitrate oxidoreductase activity","type":"related"}],"termid":"GO:0050140"}


id: PBO:0063489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1","termid":"PBO:0063489"}


id: GO:0010568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth at the tip of a bud, in a cell that reproduces by budding.","definition_xrefs":["PMID:17417630","GOC:tb","GOC:dph","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"regulates","term_name":"budding cell apical bud growth","termid":"GO:0007118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of budding cell apical bud growth","termid":"GO:0010568"}


id: GO:1900995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone binding","termid":"GO:0048039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquinone-6 binding","termid":"GO:1900995"}


id: GO:0048329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate specification","termid":"GO:0048328"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate specification","termid":"GO:0048327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate specification","synonyms":[{"name":"down regulation of axial mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate specification","type":"exact"},{"name":"downregulation of axial mesodermal cell fate specification","type":"exact"},{"name":"inhibition of axial mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048329"}


id: GO:0043372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell differentiation.","definition_xrefs":["GOC:pr","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043370"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell differentiation","termid":"GO:0046638"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"activation of CD4-positive, alpha beta T cell differentiation","type":"narrow"},{"name":"positive regulation of CD4-positive T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive T-cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive T-lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T cell development","type":"related"},{"name":"positive regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of CD4-positive, alpha beta T cell differentiation","type":"narrow"},{"name":"up regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"up-regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"upregulation of CD4-positive, alpha beta T cell differentiation","type":"exact"}],"termid":"GO:0043372"}


id: MONDO:1011830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"audiogenic seizure, non-human animal","secondary_identifiers":["OMIA:000093"],"termid":"MONDO:1011830","xrefs":{"Monarch":{"xref_id":"1011830"}}}


id: PBO:0072559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAGC divergent transcript","termid":"PBO:0072559"}


id: PBO:0077644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 1","termid":"PBO:0077644"}


id: MONDO:0012260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 19q13.","definition_xrefs":["DOID:0110261","PMID:15671291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset nuclear cataract","termid":"MONDO:0020376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 35","secondary_identifiers":["UMLS:C1836272","MEDGEN:373050","MESH:C563728","OMIM:609376","GARD:9492"],"synonyms":[{"name":"CATCN1","type":"exact"},{"name":"CTRCT35","type":"exact"},{"name":"autosomal recessive congenital nuclear cataract 1","type":"exact"},{"name":"cataract 35","type":"exact"},{"name":"cataract 35, congenital nuclear","type":"exact"},{"name":"cataract type 35","type":"exact"},{"name":"cataract, congenital nuclear, autosomal recessive 1","type":"related"}],"termid":"MONDO:0012260","xrefs":{"Monarch":{"xref_id":"0012260"}}}


id: PBO:0027197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_nuclear_envelope_breakthrough","termid":"PBO:0027197"}


id: PBO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 1","termid":"PBO:0052111"}


id: MONDO:0019658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sporadic idiopathic steroid-resistant nephrotic syndrome with diffuse mesangial proliferation (obsolete MONDO:0019658)","secondary_identifiers":["Orphanet:93222"],"termid":"MONDO:0019658","xrefs":{"Monarch":{"xref_id":"0019658"}}}


id: PBO:0059542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ile (AUU/C)","termid":"PBO:0059542"}


id: GO:1901634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle membrane organization","synonyms":[{"name":"activation of SLMV biogenesis","type":"narrow"},{"name":"activation of synaptic vesicle membrane organisation","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"positive regulation of SLMV biogenesis","type":"narrow"},{"name":"positive regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"positive regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up regulation of SLMV biogenesis","type":"narrow"},{"name":"up regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up-regulation of SLMV biogenesis","type":"narrow"},{"name":"up-regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"upregulation of SLMV biogenesis","type":"narrow"},{"name":"upregulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901634"}


id: PBO:0082866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm F; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm F","termid":"PBO:0082866"}


id: MONDO:0009568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 21 is a complex type of hereditary spastic paraplegia characterized by an onset in adolescence or adulthood of slowly progressive spastic paraparesis associated with the additional manifestations of apraxia, cognitive and speech decline (leading to dementia and akinetic mutism in some cases), personality disturbances and extrapyramidal (e.g. oromandibular dyskinesia, rigidity) and cerebellar (i.e. dysdiadochokinesia and incoordination) signs. Subtle abnormalities (e.g. developmental delays) may be noted earlier in childhood. A thin corpus callosum and white matter abnormalities are equally reported on magnetic resonance imaging.","definition_xrefs":["Orphanet:101001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"mast syndrome","secondary_identifiers":["MESH:C565409","OMIM:248900","MEDGEN:343325","UMLS:C1855346","SCTID:764734003","DOID:0060245","GARD:16939"],"synonyms":[{"name":"Mast syndrome","type":"exact"},{"name":"SPG21","type":"exact"},{"name":"autosomal recessive spastic paraplegia 21","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 21","type":"exact"},{"name":"hereditary spastic paraplegia 21","type":"exact"},{"name":"mast syndrome","type":"exact"},{"name":"spastic paraplegia 21, autosomal recessive","type":"related"}],"termid":"MONDO:0009568","xrefs":{"Monarch":{"xref_id":"0009568"}}}


id: GO:0018608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-indanone + NADPH + 1/2 O2 = NADP+ + 3-hydroxy-1-indanone.","definition_xrefs":["UM-BBD_reactionID:r0416"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-indanone dioxygenase activity (obsolete GO:0018608)","termid":"GO:0018608"}


id: PBO:0068800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 37, pseudogene","termid":"PBO:0068800"}


id: PBO:0044767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 1","termid":"PBO:0044767"}


id: GO:0001165
data:
  {"annotated_genes":["SJAG_02747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79529],"is_not":false,"summary":null,"term":"GO:0001165"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase I. RNA polymerase I elements are referred to either enhancers or upstream control element (UCE, or alternately referred to as the upstream element).","definition_xrefs":["PMID:8057832","PMID:14969726","PMID:12865296","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase I cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001166"],"synonyms":[{"name":"RNA polymerase I enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream control element sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream element sequence-specific DNA binding","type":"related"}],"termid":"GO:0001165","terms_by_termid":{"GO:0001165":null}}


id: GO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase II","secondary_identifiers":["Reactome:R-HSA-6807505"],"synonyms":[{"name":"snRNA transcription from Pol II promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0042795"}


id: GO:2001317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kojic acid.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"kojic acid metabolic process","termid":"GO:2001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"kojic acid biosynthetic process","synonyms":[{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"C6H6O4 anabolism","type":"related"},{"name":"C6H6O4 biosynthesis","type":"related"},{"name":"C6H6O4 biosynthetic process","type":"related"},{"name":"C6H6O4 formation","type":"related"},{"name":"C6H6O4 synthesis","type":"related"},{"name":"kojic acid anabolism","type":"exact"},{"name":"kojic acid biosynthesis","type":"exact"},{"name":"kojic acid formation","type":"exact"},{"name":"kojic acid synthesis","type":"exact"}],"termid":"GO:2001317"}


id: PBO:0079063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 3-1","termid":"PBO:0079063"}


id: GO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + NADPH + H+ + O2 = 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1150"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-HSA hydroxylase activity (obsolete GO:0034819)","termid":"GO:0034819"}


id: FYPO:0003053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is increased (i.e. occurs to a greater extent) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:23117617","PMID:22582262","PMID:24173580","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"increased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"increased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"increased synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003053"}


id: FYPO:0004643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of Rab geranylgeranyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal Rab geranylgeranyltransferase activity","termid":"FYPO:0004643"}


id: MONDO:0850282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is characterized by the development of persistent airway inflammation and recurrent attacks of breathlessness and wheezing, which vary in severity and frequency.","definition_xrefs":["DOID:0080809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic asthma","secondary_identifiers":["MEDGEN:1843404","UMLS:C0877430"],"synonyms":[{"name":"adult-onset severe asthma","type":"narrow"},{"name":"persistent mild asthma","type":"narrow"},{"name":"persistent moderate asthma","type":"narrow"},{"name":"persistent severe asthma","type":"narrow"}],"termid":"MONDO:0850282","xrefs":{"Monarch":{"xref_id":"0850282"}}}


id: GO:0003060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine released from vagus nerve endings binds to muscarinic receptors and decreases the force of heart muscle contraction.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of the force of heart contraction by chemical signal","termid":"GO:0003108"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by acetylcholine","synonyms":[{"name":"decreased force of heart contraction by acetylcholine","type":"exact"}],"termid":"GO:0003060"}


id: GO:0072001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal system over time, from its formation to the mature structure. The renal system maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:6996269","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system development","synonyms":[{"name":"urinary system development","type":"broad"},{"name":"urinary tract development","type":"broad"}],"termid":"GO:0072001"}


id: PBO:0076170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 2","termid":"PBO:0076170"}


id: PBO:0028394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_osmotic_stress","termid":"PBO:0028394"}


id: GO:0015516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: tartrate(out) + succinate(in) = tartrate(in) + succinate(out).","definition_xrefs":["TC:2.A.47.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"tartrate transmembrane transporter activity","termid":"GO:0015554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"tartrate:succinate antiporter activity","termid":"GO:0015516"}


id: PBO:0055652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3092","termid":"PBO:0055652"}


id: FYPO:0000320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, normal cell morphology","synonyms":[{"name":"inviable following spore germination, single cell division, normal cell morphology","type":"exact"},{"name":"inviable germinated spore, single cell division, normal cell morphology","type":"exact"},{"name":"lethal after spore germination, single cell division, normal cell morphology","type":"exact"}],"termid":"FYPO:0000320"}


id: FYPO:0003328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule organization phenotype observed in the vegetative growth phase of the life cycle in which the orientation of cytoplasmic microtubules within a cell is abnormal during interphase of the mitotic cell cycle. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"misoriented interphase microtubules","synonyms":[{"name":"misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003328"}


id: PBO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily D member 1 pseudogene","termid":"PBO:0062069"}


id: GO:0004142
data:
  {"annotated_genes":["SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93402],"is_not":false,"summary":null,"term":"GO:0004142"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine.","definition_xrefs":["RHEA:32939","EC:2.7.8.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482973","MetaCyc:RXN-5781","Reactome:R-HSA-1482961"],"synonyms":[{"name":"1-alkyl-2-acetyl-m-glycerol:CDPcholine choline phosphotransferase activity","type":"related"},{"name":"1-alkyl-2-acetyl-sn-glycerol cholinephosphotransferase activity","type":"related"},{"name":"1-alkyl-2-acetylglycerol cholinephosphotransferase activity","type":"related"},{"name":"CDP-choline diglyceride phosphotransferase activity","type":"related"},{"name":"CDP-choline:1,2-diacylglycerol cholinephosphotransferase activity","type":"related"},{"name":"CPT","type":"related"},{"name":"alkylacylglycerol choline phosphotransferase activity","type":"related"},{"name":"alkylacylglycerol cholinephosphotransferase activity","type":"related"},{"name":"cholinephosphotransferase activity","type":"related"},{"name":"cytidine diphosphocholine glyceride transferase activity","type":"related"},{"name":"cytidine diphosphorylcholine diglyceride transferase activity","type":"related"},{"name":"diacylglycerol choline phosphotransferase activity","type":"related"},{"name":"phosphocholine diacylglyceroltransferase activity","type":"related"},{"name":"phosphorylcholine--glyceride transferase activity","type":"related"},{"name":"sn-1,2-diacylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0004142","terms_by_termid":{"GO:0004142":null}}


id: PBO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana XCT","termid":"PBO:0016577"}


id: PBO:0064567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP4 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064567"}


id: PBO:0059703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 11","termid":"PBO:0059703"}


id: PATO:0002397
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A circular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, circular.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subcircular","synonyms":[{"name":"round","type":"related"},{"name":"rounded","type":"related"}],"termid":"PATO:0002397"}


id: PBO:0068287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit C pseudogene 1","termid":"PBO:0068287"}


id: MONDO:0018688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"anti-p200 pemphigoid","secondary_identifiers":["UMLS:C5681099","GARD:21892","Orphanet:454710","MEDGEN:1802806"],"termid":"MONDO:0018688","xrefs":{"Monarch":{"xref_id":"0018688"}}}


id: MONDO:0958117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autosomal dominant combined immunodeficiency due to partial IL6ST deficiency","secondary_identifiers":["Orphanet:656313","UMLS:C5925105","MEDGEN:1863566"],"termid":"MONDO:0958117","xrefs":{"Monarch":{"xref_id":"0958117"}}}


id: PBO:0060081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 28","termid":"PBO:0060081"}


id: MONDO:0018470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal agenesis (RA) is a form of renal tract malformation characterized by the complete absence of development of one or both kidneys (unilateral RA or bilateral RA respectively), accompanied by absent ureter(s).","definition_xrefs":["Orphanet:411709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal agenesis","secondary_identifiers":["HP:0008678","GARD:9228","OMIMPS:191830","HP:0000104","UMLS:C0542519","icd11.foundation:683319223","MEDGEN:154237","NANDO:2200156","DOID:14766","NCIT:C99041","SCTID:204942005"],"synonyms":[{"name":"absent/small kidney","type":"exact"},{"name":"absent/underdeveloped kidney","type":"exact"},{"name":"hereditary renal aplasia","type":"exact"},{"name":"hereditary urogenital adysplasia","type":"exact"},{"name":"renal adysplasia","type":"exact"},{"name":"renal agenesis","type":"exact"},{"name":"renal agenesis (disease)","type":"exact"},{"name":"renal agenesis/hypoplasia","type":"exact"},{"name":"renal aplasia","type":"exact"},{"name":"renal hypodysplasia/aplasia","type":"related"}],"termid":"MONDO:0018470","xrefs":{"Monarch":{"xref_id":"0018470"}}}


id: PBO:0061634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 15 pseudogene 2","termid":"PBO:0061634"}


id: PBO:0029573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_abnormal_morphology","termid":"PBO:0029573"}


id: PATO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000934 u v light sensitivity (obsolete PATO:0000934)","termid":"PATO:0000934"}


id: MONDO:0011197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary thermosensitive neuropathy is a rare, demyelinating, hereditary motor and sensory neuropathy characterized by reversible episodes of ascending muscle weakness, paresthesias and areflexia triggered by a febrile episode, with or without pressure palsy.","definition_xrefs":["Orphanet:84093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary thermosensitive neuropathy","secondary_identifiers":["OMIM:602107","MESH:C566575","SCTID:715645004","GARD:16731","MEDGEN:355568","UMLS:C1865856","icd11.foundation:1124144144"],"synonyms":[{"name":"neuropathy, hereditary thermosensitive","type":"related"}],"termid":"MONDO:0011197","xrefs":{"Monarch":{"xref_id":"0011197"}}}


id: PBO:0042269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 4","termid":"PBO:0042269"}


id: PBO:0058261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4639","termid":"PBO:0058261"}


id: GO:0140361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic-GMP-AMP from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transport","termid":"GO:1903790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane import across plasma membrane","termid":"GO:0140361"}


id: GO:1900905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hexadecanal metabolic process","synonyms":[{"name":"regulation of hexadecanal metabolism","type":"exact"}],"termid":"GO:1900905"}


id: PBO:0083429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YCL045C","termid":"PBO:0083429"}


id: PBO:0060232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker like 2","termid":"PBO:0060232"}


id: PBO:0073686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling threshold regulating transmembrane adaptor 1","termid":"PBO:0073686"}


id: PBO:0065874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 2","termid":"PBO:0065874"}


id: PBO:0055958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 72","termid":"PBO:0055958"}


id: GO:0047527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2,3-dihydroxybenzoate + L-serine = products of ATP breakdown + N-(2,3-dihydroxybenzoyl)-L-serine.","definition_xrefs":["EC:6.3.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate-serine ligase activity","secondary_identifiers":["RHEA:30571","MetaCyc:ENTMULTI-RXN"],"synonyms":[{"name":"2,3-dihydroxybenzoate:L-serine ligase activity","type":"related"},{"name":"2,3-dihydroxybenzoylserine synthetase activity","type":"related"},{"name":"N-(2,3-dihydroxybenzoyl)-serine synthetase activity","type":"related"}],"termid":"GO:0047527"}


id: PBO:0049038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 27","termid":"PBO:0049038"}


id: GO:0018226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-farnesyl-L-cysteine; formation of S-farnesycysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CXXX motif and methyl esterification of the farnesylated cysteine; the residue may be found at the first position in the sequence motif C-X-X-(SAQCMT)* where the second and third positions are usually aliphatic.","definition_xrefs":["RESID:AA0102"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-farnesyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018226)","synonyms":[{"name":"peptidyl-S-farnesyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018226"}


id: GO:1900842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"positively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of helvolic acid biosynthetic process","synonyms":[{"name":"up regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"up-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"upregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900842"}


id: MONDO:0019325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"phakomatosis cesioflammea","secondary_identifiers":["ICD9:759.6","Orphanet:79483","GARD:19023","MEDGEN:824729","SCTID:703284009","UMLS:C3838883"],"synonyms":[{"name":"phakomatosis pigmentovascularis type 2","type":"exact"}],"termid":"MONDO:0019325","xrefs":{"Monarch":{"xref_id":"0019325"}}}


id: PBO:0062581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 5 pseudogene","termid":"PBO:0062581"}


id: PBO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rapamycin","termid":"PBO:0031353"}


id: PBO:0089567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF Sec2","termid":"PBO:0089567"}


id: PBO:0073136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC16 homolog B, endoplasmic reticulum export factor","termid":"PBO:0073136"}


id: FYPO:0009026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on methionine nitrogen source","synonyms":[{"name":"increased growth on methionine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on methionine nitrogen source","type":"exact"}],"termid":"FYPO:0009026"}


id: PBO:0054856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2270","termid":"PBO:0054856"}


id: PBO:0040406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 7","termid":"PBO:0040406"}


id: MONDO:0009166
data:
  {"annotated_genes":["SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85906],"is_not":false,"summary":null,"term":"MONDO:0009166"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 4 (PCH4) is a very rare form of PCH, characterized by prenatal onset of polyhydramnios and contractures followed by hypertonia, severe clonus, primary hypoventilation leading to an early postnatal death.","definition_xrefs":["Orphanet:166063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:343","MESH:C536716","UMLS:C1856974","icd11.foundation:447667859","SCTID:718608006","DOID:0060273","OMIM:225753","MEDGEN:384027"],"synonyms":[{"name":"PCH4","type":"exact"},{"name":"encephalopathy fatal infantile with olivopontocerebellar hypoplasia","type":"related"},{"name":"encephalopathy, fatal infantile, with olivopontocerebellar Hypoplasia","type":"related"},{"name":"fatal infantile encephalopathy with olivopontocerebellar hypoplasia","type":"exact"},{"name":"olivopontocerebellar hypoplasia","type":"exact"},{"name":"pontocerebellar hypoplasia, type 4","type":"related"}],"termid":"MONDO:0009166","terms_by_termid":{"MONDO:0009166":null},"xrefs":{"Monarch":{"xref_id":"0009166"}}}


id: MONDO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypochondrogenesis (obsolete MONDO:0000852)","termid":"MONDO:0000852","xrefs":{"Monarch":{"xref_id":"0000852"}}}


id: GO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the peritrophic membrane, a tubular sheath of cuticle that shields the epithelial cells of the midgut from the gut contents. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of peritrophic membrane","synonyms":[{"name":"structural constituent of peritrophic matrix","type":"related"}],"termid":"GO:0016490"}


id: GO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of temperature.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermosensory behavior","synonyms":[{"name":"behavioral response to temperature stimulus","type":"exact"},{"name":"behavioural response to temperature stimulus","type":"exact"},{"name":"thermosensory behaviour","type":"exact"}],"termid":"GO:0040040"}


id: GO:0034003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + vetispiradiene.","definition_xrefs":["EC:4.2.3.21","RHEA:10340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"vetispiradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-4823","KEGG_REACTION:R06523"],"synonyms":[{"name":"HVS","type":"related"},{"name":"pemnaspirodiene synthase activity","type":"related"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, vetispiradiene-forming) activity","type":"related"},{"name":"vetispiradiene cyclase activity","type":"related"},{"name":"vetispiradiene-forming farnesyl pyrophosphate cyclase activity","type":"related"}],"termid":"GO:0034003"}


id: PBO:0117409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC4 pseudogene 1","termid":"PBO:0117409"}


id: PBO:0052571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KMT2E antisense RNA 1","termid":"PBO:0052571"}


id: MONDO:0012465
data:
  {"annotated_genes":["SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85566],"is_not":false,"summary":null,"term":"MONDO:0012465"}]},"cv_name":"mondo","definition":"The combination of a propensity for venous thrombosis and seizures has been reported in two unrelated kindreds. Transmission is autosomal recessive. It results from a point mutation of PIGM, which reduces transcription of PIGM and blocks mannosylation of glycosylphosphatidylinositol (GPI), leading to partial but severe deficiency of GPI.","definition_xrefs":["Orphanet:83639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005570","MONDO:0002525"],"is_obsolete":false,"name":"hypercoagulability syndrome due to glycosylphosphatidylinositol deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200983","UMLS:C5201145","OMIM:610293","GARD:9965","MEDGEN:1684821","icd11.foundation:1811042875","SCTID:724344004"],"synonyms":[{"name":"GPI deficiency","type":"related"},{"name":"GPID","type":"related"},{"name":"PIGM-CDG","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGM deficiency","type":"related"},{"name":"glycosylphosphatidylinositol biosynthesis defect 1","type":"related"},{"name":"glycosylphosphatidylinositol deficiency","type":"related"}],"termid":"MONDO:0012465","terms_by_termid":{"MONDO:0012465":null},"xrefs":{"Monarch":{"xref_id":"0012465"}}}


id: PBO:0089455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit Toa2","termid":"PBO:0089455"}


id: GO:0042418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:jl","ISBN:0192801023","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine metabolic process","termid":"GO:0042414"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine biosynthetic process","synonyms":[{"name":"adrenaline biosynthesis","type":"exact"},{"name":"adrenaline biosynthetic process","type":"exact"},{"name":"epinephrine anabolism","type":"exact"},{"name":"epinephrine biosynthesis","type":"exact"},{"name":"epinephrine formation","type":"exact"},{"name":"epinephrine synthesis","type":"exact"}],"termid":"GO:0042418"}


id: PBO:0058059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4280","termid":"PBO:0058059"}


id: MONDO:0032897
data:
  {"annotated_genes":["SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87035],"is_not":false,"summary":null,"term":"MONDO:0032897"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00342":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with hypotonia and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618748","MEDGEN:1684709","UMLS:C5231489"],"synonyms":[{"name":"IDDHBA","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH HYPOTONIA AND BEHAVIORAL ABNORMALITIES","type":"related"}],"termid":"MONDO:0032897","terms_by_termid":{"MONDO:0032897":null},"xrefs":{"Monarch":{"xref_id":"0032897"}}}


id: PBO:0054427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1823","termid":"PBO:0054427"}


id: PR:O59703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl pyrophosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.06c","synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dimethylallyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Farnesyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGPPSase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Geranyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo9","type":"exact"},{"name":"farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"geranylgeranyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation-specific protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59703"}


id: SO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon flanked by long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_retrotransposon","synonyms":[{"name":"LTR retrotransposon","type":"exact"},{"name":"long terminal repeat retrotransposon","type":"exact"}],"termid":"SO:0000186"}


id: GO:0034018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose = 1,5-anhydro-4-deoxy-D-glycero-hex-1-en-3-ulose.","definition_xrefs":["EC:5.3.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"ascopyrone tautomerase activity","secondary_identifiers":["RHEA:22568","MetaCyc:5.3.3.15-RXN"],"synonyms":[{"name":"1,5-anhydro-D-glycero-hex-3-en-2-ulose delta3-delta1-isomerase activity","type":"related"},{"name":"1,5-anhydro-D-glycero-hex-3-en-2-ulose tautomerase activity","type":"related"},{"name":"APM tautomerase activity","type":"related"},{"name":"APTM","type":"related"},{"name":"ascopyrone P tautomerase activity","type":"related"},{"name":"ascopyrone intramolecular oxidoreductase activity","type":"related"},{"name":"ascopyrone isomerase activity","type":"related"}],"termid":"GO:0034018"}


id: PBO:0044140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 6","termid":"PBO:0044140"}


id: PBO:0077301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 41A","termid":"PBO:0077301"}


id: MONDO:0031632
data:
  {"annotated_genes":["SJAG_04085","SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800438"},{"annotations":[86118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100217"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934768","DOID:0070476","UMLS:C4310801","OMIMPS:616901"],"termid":"MONDO:0031632","terms_by_termid":{"MONDO:0100217":null,"MONDO:0800438":null},"xrefs":{"Monarch":{"xref_id":"0031632"}}}


id: GO:1900939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"negatively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900939"}


id: PBO:0085585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Arf3p regulation and in transcription regulation; localizes to the nucleus and to endocytic patches; contains an N-terminal Zn-finger and ArfGAP homology domain, a C-terminal glutamine-rich region, and a UBA (ubiquitin associated) domain; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms, endocytosis; expression oscillates in a pattern similar to metabolic oscillations","termid":"PBO:0085585"}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-oxocholesterol + H+ + NADPH = 7alpha-hydroxycholesterol + NADP+.","definition_xrefs":["RHEA:68740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192178","Reactome:R-HSA-191972","Reactome:R-HSA-192065","Reactome:R-HSA-5602885"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: MONDO:0017648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder characterized by rapid, jerky, irregular, and involuntary movements (chorea), especially of the face and limbs. Additional symptoms may include muscle weakness, slurred speech, headaches, and seizures.","definition_xrefs":["GARD:0007716"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete postinfectious autoimmune disease with chorea (obsolete MONDO:0017647)","termid":"MONDO:0017647"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sydenham chorea","secondary_identifiers":["UMLS:C0152113","GARD:7716","Orphanet:306731","NCIT:C168445","MedDRA:10042732","MEDGEN:57506","icd11.foundation:1295812812"],"termid":"MONDO:0017648","xrefs":{"Monarch":{"xref_id":"0017648"}}}


id: PBO:0086851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of protein phosphatase Glc7p; involved in glycogen metabolism; contains a conserved motif (GVNK motif) that is also found in Gac1p, Pig1p, and Pig2p; GIP2 has a paralog, PIG2, that arose from the whole genome duplication","termid":"PBO:0086851"}


id: MONDO:0010787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kearns-Sayre syndrome (KSS) is a mitochondrial disease characterized by progressive external ophthalmoplegia (PEO), pigmentary retinitis and an onset before the age of 20 years. Common additional features include deafness, cerebellar ataxia and heart block.","definition_xrefs":["Orphanet:480"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005267","MONDO:0005066","MONDO:0005244","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Kearns-Sayre syndrome","secondary_identifiers":["MESH:D007625","GARD:6817","NCIT:C84798","OMIM:530000","MedDRA:10048804","NANDO:1201064","SCTID:25792000","NANDO:2200529","UMLS:C0022541","NORD:1323","DOID:12934","icd11.foundation:399100745","MEDGEN:9618"],"synonyms":[{"name":"CPEO with myopathy","type":"related"},{"name":"CPEO with ragged red fibers","type":"related"},{"name":"CPEO with ragged red fibres","type":"related"},{"name":"CPEO with ragged-Red fibers","type":"related"},{"name":"CPEO with ragged-Red fibres","type":"related"},{"name":"KSS","type":"related"},{"name":"Kearns Sayre Syndrome","type":"exact"},{"name":"Kearns-Sayre syndrome","type":"exact"},{"name":"chronic progressive external ophthalmoplegia with myopathy","type":"related"},{"name":"mitochondrial Cytopathy","type":"related"},{"name":"oculocraniosomatic syndrome","type":"related"},{"name":"ophthalmoplegia plus syndrome","type":"related"},{"name":"ophthalmoplegia, pigmentary Degeneration of retina, and cardiomyopathy","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged red fibers","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged red fibres","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged-Red fibers","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged-Red fibres","type":"related"},{"name":"ophthalmoplegia-plus syndrome","type":"related"}],"termid":"MONDO:0010787","xrefs":{"Monarch":{"xref_id":"0010787"}}}


id: FYPO:0006616
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119648,119649],"is_not":false,"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and has a diameter greater than normal. Cell volume may or may not be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased cell diameter","termid":"FYPO:0006615"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell diameter","termid":"FYPO:0006615"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"viable vegetative cell with increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00028","SJAG_04522"],"single_locus_genotype_uniquenames":["rga6delta","rga4delta"],"synonyms":[{"name":"viable cell with increased cell diameter during vegetative growth","type":"exact"},{"name":"viable vegetative cell with increased cell diameter during mitotic cell cycle","type":"related"},{"name":"viable vegetative cell with increased cell thickness","type":"exact"},{"name":"viable vegetative cell with increased cell width","type":"exact"}],"termid":"FYPO:0006616","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0053954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1259","termid":"PBO:0053954"}


id: PR:P36620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv1 gene.","definition_xrefs":["UniProtKB:P36620","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.07","synonyms":[{"name":"AHAS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ALS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilv1","type":"exact"},{"name":"acetohydroxy-acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36620"}


id: GO:0015858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nucleoside transport","termid":"GO:0015858"}


id: PBO:0085330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein; has a potential role in regulating lipid and fatty acid metabolism under heme-depleted conditions; interacts specifically with thioredoxin peroxidase; may have a role in oxidative stress resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0085330"}


id: PBO:0057524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 642a","termid":"PBO:0057524"}


id: GO:1990254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a keratin filament, an intermediate filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells.","definition_xrefs":["PMID:6170061","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament binding","termid":"GO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"keratin filament binding","termid":"GO:1990254"}


id: FYPO:0006223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of ferrous iron ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ferrous iron import","synonyms":[{"name":"abnormal cellular ferrous iron import","type":"exact"},{"name":"abnormal ferrous ion import","type":"exact"},{"name":"abnormal ferrous ion import across plasma membrane","type":"exact"},{"name":"abnormal ferrous iron import during mitotic cell cycle","type":"related"},{"name":"abnormal ferrous iron import during vegetative growth","type":"exact"},{"name":"abnormal ferrous iron import into cell","type":"exact"},{"name":"abnormal ferrous iron ion import","type":"exact"}],"termid":"FYPO:0006223"}


id: MONDO:0007116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary neurocutaneous angioma is characterized by the association of cerebral and cutaneous angiomatous lesions. It has been described in less than 10 families. Clinical manifestations of the cerebral lesions include epilepsy, cerebral hemorrhage, and focal neurological deficit. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:1062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary neurocutaneous angioma","secondary_identifiers":["GARD:676","icd11.foundation:182579434","OMIM:106070","MEDGEN:226898","UMLS:C1275084"],"synonyms":[{"name":"angioma hereditary neurocutaneous","type":"related"},{"name":"angioma, hereditary neurocutaneous","type":"related"},{"name":"hemangiomatosis, disseminated","type":"related"},{"name":"hereditary neurocutaneous angioma","type":"exact"},{"name":"hereditary neurocutaneous malformation","type":"related"},{"name":"spinal arterial Venous malformations with cutaneous hemangiomas","type":"related"}],"termid":"MONDO:0007116","xrefs":{"Monarch":{"xref_id":"0007116"}}}


id: GO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["LIGAND:C03367","PubChem_Compound:439991","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose metabolic process","synonyms":[{"name":"6-alpha-maltosylglucose metabolism","type":"exact"},{"name":"isopanose metabolic process","type":"exact"},{"name":"isopanose metabolism","type":"exact"}],"termid":"GO:0051679"}


id: MOD:00844
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled residue","termid":"MOD:00844"}


id: FYPO:0004215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 20 of histone H4 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H4-K20 methylation during vegetative growth","synonyms":[{"name":"abnormal histone H4 K20 methylation during vegetative growth","type":"exact"},{"name":"abnormal histone H4-K20 methylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H4K20me during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H4 K20 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004215"}


id: PBO:0077326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63B","termid":"PBO:0077326"}


id: PBO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.3.1","termid":"PBO:0003054"}


id: MONDO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of nodules in the isthmus of the fallopian tube due to fallopian tube diverticulosis. It may cause infertility or ectopic pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic salpingitis","termid":"MONDO:0003617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salpingitis isthmica nodosa","secondary_identifiers":["MEDGEN:82840","icd11.foundation:1586025352","NCIT:C40119","DOID:5730","UMLS:C0269043","SCTID:36742000"],"termid":"MONDO:0003616","xrefs":{"Monarch":{"xref_id":"0003616"}}}


id: MONDO:0019835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune-mediated inflammation of the pituitary gland often associated with other autoimmune diseases (e.g., hashimoto disease; graves disease; and addison disease).","definition_xrefs":["MESH:D000069281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"},{"relation_name":"is_a","term_name":"hypophysitis","termid":"MONDO:0021156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary hypophysitis","secondary_identifiers":["Orphanet:95506","UMLS:C0342410","GARD:19281","ICD9:253.8","SCTID:237706000","ICD9:279.49","NCIT:C132055","MEDGEN:575013"],"synonyms":[{"name":"autoimmune hypophysitis","type":"exact"},{"name":"lymphocytic hypophysitis","type":"exact"}],"termid":"MONDO:0019835","xrefs":{"Monarch":{"xref_id":"0019835"}}}


id: MONDO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cicatricial entropion","secondary_identifiers":["UMLS:C0155191","ICD9:374.04","SCTID:67383002","DOID:13113","MEDGEN:509840"],"termid":"MONDO:0001637","xrefs":{"Monarch":{"xref_id":"0001637"}}}


id: MONDO:0800428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dengue shock syndrome, susceptibility to","secondary_identifiers":["MEDGEN:482215","UMLS:C3280585"],"termid":"MONDO:0800428","xrefs":{"Monarch":{"xref_id":"0800428"}}}


id: MONDO:0018829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of schizencephaly that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizencephaly","termid":"MONDO:0010011"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"familial schizencephaly","secondary_identifiers":["Orphanet:481986","UMLS:C2931870","GARD:17876","MEDGEN:419186","MESH:C538514"],"synonyms":[{"name":"familial schizencephaly","type":"exact"},{"name":"hereditary schizencephaly","type":"exact"}],"termid":"MONDO:0018829","xrefs":{"Monarch":{"xref_id":"0018829"}}}


id: GO:0030653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"beta-lactam antibiotic metabolic process","synonyms":[{"name":"beta-lactam antibiotic metabolism","type":"exact"}],"termid":"GO:0030653"}


id: PBO:0057235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 422a","termid":"PBO:0057235"}


id: MOD:00559
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +76","synonyms":[{"name":"Acrolein addition +76","type":"related"},{"name":"Delta:H(4)C(6)","type":"related"}],"termid":"MOD:00559"}


id: PBO:0086411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; located in the cytoplasm and endoplasmic reticulum","termid":"PBO:0086411"}


id: GO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete general transcriptional repressor activity (obsolete GO:0016565)","synonyms":[{"name":"general transcriptional repressor activity","type":"exact"}],"termid":"GO:0016565"}


id: PBO:0041890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit gamma","termid":"PBO:0041890"}


id: MONDO:0016153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of TRIM32","secondary_identifiers":["UMLS:C5680829","MEDGEN:1843261","Orphanet:207107","GARD:20400"],"termid":"MONDO:0016153","xrefs":{"Monarch":{"xref_id":"0016153"}}}


id: PBO:0044589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBT pseudogene 1","termid":"PBO:0044589"}


id: MONDO:0015162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare syndromic intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare syndromic intellectual disability (obsolete MONDO:0015162)","secondary_identifiers":["Orphanet:102369"],"synonyms":[{"name":"rare syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0015162","xrefs":{"Monarch":{"xref_id":"0015162"}}}


id: MONDO:0010016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sclerosteosis in which the cause of the disease is a mutation in the SOST gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosteosis","termid":"MONDO:0017838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosteosis 1","secondary_identifiers":["GARD:15233","OMIM:269500","UMLS:C4551483","DOID:0060756","MEDGEN:1642815"],"synonyms":[{"name":"SOST","type":"related"},{"name":"SOST sclerosteosis","type":"exact"},{"name":"SOST1","type":"exact"},{"name":"cortical hyperostosis with syndactyly","type":"related"},{"name":"sclerosteosis 1","type":"exact"},{"name":"sclerosteosis caused by mutation in SOST","type":"exact"},{"name":"sclerosteosis type 1","type":"exact"}],"termid":"MONDO:0010016","xrefs":{"Monarch":{"xref_id":"0010016"}}}


id: MONDO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm that projects above the surrounding epithelial surface and consists of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C7440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papilloma","secondary_identifiers":["ICDO:8050/0","DOID:2615","NCIT:C3713","MESH:D010212","MEDGEN:10566","UMLS:C0030354","SCTID:711329002"],"synonyms":[{"name":"papilloma","type":"exact"},{"name":"papilloma (except papilloma of bladder M-81201) (morphologic abnormality)","type":"exact"},{"name":"papilloma, benign","type":"exact"},{"name":"papillomatosis NOS (morphologic abnormality)","type":"related"}],"termid":"MONDO:0002363","xrefs":{"Monarch":{"xref_id":"0002363"}}}


id: GO:1903123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of thioredoxin peroxidase activity.","definition_xrefs":["GO_REF:0000059","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thioredoxin peroxidase activity (obsolete GO:1903123)","synonyms":[{"name":"regulation of TPx activity","type":"exact"},{"name":"regulation of TrxPx activity","type":"exact"},{"name":"regulation of thiol peroxidase activity","type":"exact"}],"termid":"GO:1903123"}


id: PBO:0072840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30L antisense RNA 1 (head to head)","termid":"PBO:0072840"}


id: GO:0102182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol + NAD = avenastenone + NADH + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102182)","termid":"GO:0102182"}


id: PBO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III Maf1","termid":"PBO:0001836"}


id: PBO:0067311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 397, pseudogene","termid":"PBO:0067311"}


id: PBO:0084188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H1, linker histone with roles in meiosis and sporulation; decreasing levels early in sporulation may promote meiosis, and increasing levels during sporulation facilitate compaction of spore chromatin; binds to promoters and within genes in mature spores; may be recruited by Ume6p to promoter regions, contributing to transcriptional repression outside of meiosis; suppresses DNA repair involving homologous recombination","termid":"PBO:0084188"}


id: GO:0033532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of stachyose, the tetrasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"stachyose metabolic process","termid":"GO:0033531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"stachyose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5337"],"synonyms":[{"name":"stachyose anabolism","type":"exact"},{"name":"stachyose biosynthesis","type":"exact"},{"name":"stachyose formation","type":"exact"},{"name":"stachyose synthesis","type":"exact"}],"termid":"GO:0033532"}


id: MONDO:0020038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gonadal dysgenesis of gynecological interest (obsolete MONDO:0020038)","secondary_identifiers":["Orphanet:98074"],"termid":"MONDO:0020038","xrefs":{"Monarch":{"xref_id":"0020038"}}}


id: PBO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein blinkin, Spc7","termid":"PBO:0015706"}


id: MONDO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"HIV-associated cancer","secondary_identifiers":["Orphanet:443291","GARD:21857","MEDGEN:1843219","UMLS:C5680059","NCIT:C4046"],"synonyms":[{"name":"HIV-related cancer","type":"exact"}],"termid":"MONDO:0018628","xrefs":{"Monarch":{"xref_id":"0018628"}}}


id: GO:0038162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by erythropoietin (EPO) binding to the erythropoietin receptor (EPO-R) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12489509","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to erythropoietin","termid":"GO:0036018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"erythropoietin-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9006335"],"synonyms":[{"name":"EPO-R signaling pathway","type":"exact"},{"name":"erythropoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038162"}


id: GO:1904716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:20176123","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated autophagy","termid":"GO:1904714"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated autophagy","synonyms":[{"name":"activation of CMA","type":"related"},{"name":"activation of chaperone-mediated autophagy","type":"narrow"},{"name":"positive regulation of CMA","type":"related"},{"name":"up regulation of CMA","type":"related"},{"name":"up regulation of chaperone-mediated autophagy","type":"exact"},{"name":"up-regulation of CMA","type":"related"},{"name":"up-regulation of chaperone-mediated autophagy","type":"exact"},{"name":"upregulation of CMA","type":"related"},{"name":"upregulation of chaperone-mediated autophagy","type":"exact"}],"termid":"GO:1904716"}


id: PBO:0080493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor C domain containing 2 like","termid":"PBO:0080493"}


id: GO:1904284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antigen processing and presentation of endogenous peptide antigen via MHC class I.","definition_xrefs":["GOC:TermGenie","GOC:rl","PMID:24643698","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002591"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:1904282"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","synonyms":[{"name":"activation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"narrow"},{"name":"activation of endogenous peptide antigen processing and presentation via MHC class I","type":"narrow"},{"name":"positive regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"up regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"up regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"up-regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"up-regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"upregulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"upregulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:1904284"}


id: MONDO:1012005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alloimmune hemolytic anemia of the newborn, non-human animal","termid":"MONDO:1011684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloimmune hemolytic anemia of the newborn, dog","secondary_identifiers":["OMIA:000028-9615"],"termid":"MONDO:1012005","xrefs":{"Monarch":{"xref_id":"1012005"}}}


id: MONDO:0100586
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012282"},{"annotations":[86385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014139"},{"annotations":[87092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010075"}]},"cv_name":"mondo","definition":"Any congenital disorder of glycosylation in which the cause of the disease is a mutation in B3GALT6.","definition_xrefs":["PMID:30740740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"B3GALT6-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"B3GALT6-CDG","type":"exact"},{"name":"B3GALT6-congenital disorder of glycosylation","type":"exact"},{"name":"B3GALT6-related congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100586","terms_by_termid":{"MONDO:0010075":null,"MONDO:0012282":null,"MONDO:0014139":null},"xrefs":{"Monarch":{"xref_id":"0100586"}}}


id: MONDO:0016372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glossopharyngeal neuralgia is a condition characterized by repeated episodes of severe pain in the tongue, throat, ear, and tonsils (areas connected to the ninth cranial nerve, or glossopharyngeal nerve). It typically occurs in individuals over age 40. Episodes of pain may last from a few seconds to a few minutes, and usually occur on one side. The pain may be triggered by swallowing, speaking, laughing, chewing or coughing. The condition is thought to be due to irritation of the nerve, although the source of irritation is unclear. The goal of treatment is to control pain, but over-the-counter pain medications are not very effective; the most effective drugs are anti-seizure medications. Some antidepressants help certain people. Surgery to cut or take pressure off of the glossopharyngeal nerve may be needed in severe cases.","direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"glossopharyngeal neuralgia","secondary_identifiers":["Orphanet:221098","DOID:14423","MEDGEN:57595","MedDRA:10018391","GARD:6519","SCTID:43763009","ICD9:352.1","UMLS:C0154731"],"synonyms":[{"name":"Glossovasopharyngeal neuralgia","type":"exact"},{"name":"glossopharyngeal nerve neuralgia","type":"exact"},{"name":"glossopharyngeal neuralgia","type":"exact"},{"name":"neuralgia of glossopharyngeal nerve","type":"exact"}],"termid":"MONDO:0016372","xrefs":{"Monarch":{"xref_id":"0016372"}}}


id: MONDO:0002681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the choroid plexus","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choroid plexus cancer","secondary_identifiers":["UMLS:C0346289","DOID:3540","NCIT:C4533","EFO:0007206","MEDGEN:138053"],"synonyms":[{"name":"cancer of choroid plexus","type":"exact"},{"name":"choroid plexus cancer","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"malignant choroid plexus neoplasm","type":"exact"},{"name":"malignant choroid plexus neoplasms","type":"exact"},{"name":"malignant choroid plexus tumor","type":"exact"},{"name":"malignant choroid plexus tumors","type":"exact"},{"name":"malignant choroid plexus tumour","type":"exact"},{"name":"malignant choroid plexus tumours","type":"exact"},{"name":"malignant neoplasm of choroid plexus","type":"exact"},{"name":"malignant neoplasm of the choroid plexus","type":"exact"},{"name":"malignant tumor of choroid plexus","type":"exact"},{"name":"malignant tumor of the choroid plexus","type":"exact"},{"name":"malignant tumour of choroid plexus","type":"exact"},{"name":"malignant tumour of the choroid plexus","type":"exact"},{"name":"tumor of choroid plexus","type":"broad"},{"name":"tumour of choroid plexus","type":"broad"},{"name":"tumour of the choroid plexus","type":"broad"}],"termid":"MONDO:0002681","xrefs":{"Monarch":{"xref_id":"0002681"}}}


id: GO:0097235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:1899286"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097235)","termid":"GO:0097235"}


id: PBO:0063004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 1","termid":"PBO:0063004"}


id: MOD:01415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a monohydroxylated isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated isoleucine","termid":"MOD:01414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated isoleucine","synonyms":[{"name":"Hy1Ile","type":"exact"}],"termid":"MOD:01415"}


id: PBO:0031045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_diamide","termid":"PBO:0031045"}


id: PBO:0049456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 1","termid":"PBO:0049456"}


id: PBO:0113101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate denatured, protein aggregates; responds to stresses (heat, ethanol, and sodium arsenite); required for the protein aggregate solid-to-liquid phase transition and dispersal of liquid condensates; involved in [PSI+] propagation; potentiated variants eliminate TDP-43 cytoplasmic aggregates to reduce proteotoxicity; becomes more abundant and forms cytoplasmic foci during replication stress","termid":"PBO:0113101"}


id: MONDO:0018851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple familial keratoacanthoma (KA) of Witten and Zak is a rare a rare inherited skin cancer syndrome and is characterized by the coexistence of features characteristic of both multiple KA, Ferguson Smith type and generalized eruptive keratoacanthoma, such as multiple small miliary-type lesions, larger self-healing lesions, and nodulo-ulcerative lesions. Lesions do not have a predilection for the mucosal surfaces. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"keratoacanthoma","termid":"MONDO:0002527"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial keratoacanthoma","secondary_identifiers":["GARD:18693","MEDGEN:1843863","UMLS:C5848325","SCTID:716774008"],"synonyms":[{"name":"hereditary keratoacanthoma","type":"exact"},{"name":"multiple keratoacanthoma","type":"exact"}],"termid":"MONDO:0018851","xrefs":{"Monarch":{"xref_id":"0018851"}}}


id: PBO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 81 member A","termid":"PBO:0046959"}


id: PBO:0062361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily U member 2 pseudogene","termid":"PBO:0062361"}


id: PBO:0005829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf13 (predicted)","termid":"PBO:0005829"}


id: PBO:0087309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small heat shock protein (sHSP) with chaperone activity; forms hollow, sphere-shaped oligomers that suppress unfolded proteins aggregation; long-lived protein that is preferentially retained in mother cells and forms cytoplasmic foci; oligomer activation requires heat-induced conformational change; also has mRNA binding activity","termid":"PBO:0087309"}


id: PBO:0053397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 327","termid":"PBO:0053397"}


id: GO:0031604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits forming the outer ring of the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome core complex","termid":"GO:0031601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome core complex, alpha-subunit complex","termid":"GO:0031604"}


id: MONDO:1012121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypothyroidism, non-human animal","termid":"MONDO:1011678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypothyroidism, dog","secondary_identifiers":["OMIA:000538-9615"],"termid":"MONDO:1012121","xrefs":{"Monarch":{"xref_id":"1012121"}}}


id: MONDO:0009396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, neonatal self-limited primary, with hypercalciuria","secondary_identifiers":["MEDGEN:344611","UMLS:C1855924","MESH:C565496","OMIM:239199"],"synonyms":[{"name":"hyperparathyroidism, neonatal self-limited primary, with hypercalciuria","type":"exact"}],"termid":"MONDO:0009396","xrefs":{"Monarch":{"xref_id":"0009396"}}}


id: MONDO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eating disorder characterized by the persistent eating of nonnutritive substances such as clay or soil; this behavior must be inappropriate to the level of the individual's development.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pica disease","secondary_identifiers":["MESH:D010842","UMLS:C0031873","DOID:12128","NCIT:C92566","SCTID:14077003","ICD9:307.52","MEDGEN:45917"],"synonyms":[{"name":"Pica","type":"exact"},{"name":"Pica eating disorder","type":"exact"}],"termid":"MONDO:0001441","xrefs":{"Monarch":{"xref_id":"0001441"}}}


id: PBO:0074316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD5 antisense RNA 1","termid":"PBO:0074316"}


id: GO:0038119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL19 to a C-C chemokine type 7 receptor (CCR7) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:15059845","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 19 signaling pathway","termid":"GO:0038115"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL19-activated CCR7 signaling pathway","synonyms":[{"name":"CCL19-activated CCR7 signalling pathway","type":"exact"}],"termid":"GO:0038119"}


id: PBO:0087078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L39; required for ribosome biogenesis; loss of both Rpl31p and Rpl39p confers lethality; also exhibits genetic interactions with SIS1 and PAB1; homologous to mammalian ribosomal protein L39, no bacterial homolog","termid":"PBO:0087078"}


id: PBO:0029725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis,_with_abnormal_nuclear_division","termid":"PBO:0029725"}


id: PBO:0053066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LATS2 antisense RNA 1","termid":"PBO:0053066"}


id: MOD:01966
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00720. Remap to MOD:00720.","definition_xrefs":["ChEBI:45764","PubMed:22116028","PubMed:21406390","PubMed:23911929","RESID:AA0581"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01966 L-methionine (R)-sulfoxide (obsolete MOD:01966)","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"}],"termid":"MOD:01966"}


id: GO:1901518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aspyridone A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"aspyridone A metabolic process","termid":"GO:1901516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"aspyridone A biosynthetic process","synonyms":[{"name":"aspyridone A anabolism","type":"exact"},{"name":"aspyridone A biosynthesis","type":"exact"},{"name":"aspyridone A formation","type":"exact"},{"name":"aspyridone A synthesis","type":"exact"}],"termid":"GO:1901518"}


id: MONDO:0024772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","secondary_identifiers":["DOID:0070422","MEDGEN:1803486","OMIM:301076","UMLS:C5676881"],"synonyms":[{"name":"MRXSP","type":"exact"},{"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","type":"exact"}],"termid":"MONDO:0024772","xrefs":{"Monarch":{"xref_id":"0024772"}}}


id: GO:1905836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:28078994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triterpenoid","termid":"GO:1905836"}


id: PBO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNO divergent transcript","termid":"PBO:0042217"}


id: PBO:0059281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L39","termid":"PBO:0059281"}


id: GO:0044877
data:
  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to a macromolecular 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id: PBO:0072180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 7","termid":"PBO:0072180"}


id: GO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between a bundle of His cardiac muscle cell and a Purkinje myocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"bundle of His cell to Purkinje myocyte communication","termid":"GO:0086069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte communication by electrical coupling","synonyms":[{"name":"bundle of His cardiac muscle cell to Purkinje myocyte communication by electrical coupling","type":"exact"}],"termid":"GO:0086054"}


id: MONDO:0014918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tall stature-intellectual disability-renal anomalies syndrome","secondary_identifiers":["OMIM:617107","UMLS:C4310715","Orphanet:500095","MEDGEN:934682","GARD:17921"],"synonyms":[{"name":"THAUVIN-robinet-Faivre syndrome","type":"related"},{"name":"TROFAS","type":"exact"},{"name":"Thauvin-robinet-Faivre syndrome","type":"exact"}],"termid":"MONDO:0014918","xrefs":{"Monarch":{"xref_id":"0014918"}}}


id: GO:1905358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GOC:TermGenie","PMID:27268497","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"},{"relation_name":"positively_regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"positive regulation of snRNA pseudouridine synthesis","synonyms":[{"name":"activation of snRNA pseudouridine synthesis","type":"narrow"},{"name":"up regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"up-regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"upregulation of snRNA pseudouridine synthesis","type":"exact"}],"termid":"GO:1905358"}


id: PBO:0081176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 26","termid":"PBO:0081176"}


id: GO:0016759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside-disphosphate-glucose + ((1,4)-beta-D-glucosyl)(n) = nucleoside-disphosphate + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cellulose synthase activity","synonyms":[{"name":"cellulose synthetase activity","type":"related"}],"termid":"GO:0016759"}


id: GO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0166"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process via N-seryl-glycosylsphingolipidinositolethanolamine (obsolete GO:0018281)","synonyms":[{"name":"GSI anchor anabolism via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor formation via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor synthesis via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"GO:0018281"}


id: MONDO:0013101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 2","secondary_identifiers":["OMIM:613058","MEDGEN:442769","UMLS:C2751606"],"synonyms":[{"name":"BCC2","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0013101","xrefs":{"Monarch":{"xref_id":"0013101"}}}


id: PBO:0013442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosomal protein Rsm22 fusion protein","termid":"PBO:0013442"}


id: GO:0044435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a plastid, a member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid part (obsolete GO:0044435)","termid":"GO:0044435"}


id: GO:0044839
data:
  {"annotated_genes":["SJAG_04486","SJAG_01805","SJAG_02723","SJAG_02392","SJAG_02771","SJAG_01084","SJAG_01605","SJAG_01429","SJAG_03160","SJAG_01311","SJAG_03048","SJAG_03073","SJAG_02563","SJAG_00082","SJAG_01855","SJAG_06592","SJAG_03067","SJAG_02266","SJAG_03695","SJAG_04332","SJAG_02576","SJAG_05373","SJAG_00214","SJAG_00883","SJAG_01076","SJAG_01205","SJAG_03126","SJAG_04140","SJAG_00117","SJAG_02342","SJAG_00256","SJAG_04655","SJAG_01044","SJAG_01146","SJAG_04597","SJAG_03927","SJAG_00216","SJAG_04280","SJAG_03309","SJAG_03026","SJAG_01010","SJAG_00318","SJAG_04469","SJAG_00364","SJAG_04671","SJAG_04287","SJAG_03942","SJAG_01873","SJAG_02592","SJAG_04394","SJAG_00526","SJAG_03592","SJAG_02332","SJAG_00600","SJAG_03486","SJAG_03529","SJAG_01000","SJAG_03854","SJAG_01118","SJAG_01837","SJAG_02074","SJAG_00640","SJAG_03602","SJAG_01901","SJAG_01680","SJAG_02858","SJAG_02098","SJAG_01456"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118314,77593,106710,104623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000086"},{"annotations":[91768,106933,116360],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[94744,100860,101758,90336,116306],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[94301,79827,99516,117102,71473,72795,109628,112344,106936,75106,117403,91769,79168,100861,116362,117575,99683],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[116308,94875,96183,98754],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[117317,118012,90550,112038,72793,89461,92132,75600,109629,100862,106937,91770,101372,79769,99685],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[111743,114772,112129,94704,104816,106968,93908,93559,93266,108887,112787,101317,78834,107332],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[78838,70955],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[98755,99325,88390,107551,102077,88399,108889,94707,92072,111510,116785,94746,92476,94141,116973,73887,71141,103808,110656],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[101708,88193],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[73892],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[112275,71958],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G2 phase commits to M phase.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase 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