# terms

id: PBO:0085553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein constituent of 66S pre-ribosomal particles; contributes to processing of the 27S pre-rRNA; recruited by ribosomal proteins L17, L35, and L37 to assembling ribosomes after 27SB pre-rRNA is generated, immediately preceding removal of ITS2","termid":"PBO:0085553"}


id: PBO:0076305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 1","termid":"PBO:0076305"}


id: MONDO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hairy Cell Leukemia variant (HCL-V) is defined as a rare and indolent form of small, mature, B-cell leukemia characterized by splenomegaly, an elevated white blood cell (WBC) count and hyper-cellular bone marrow. HCL-V is more aggressive and resistant to therapy than classical HCL (HCL-C).","definition_xrefs":["Orphanet:300878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy cell leukemia","termid":"MONDO:0018935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hairy cell leukemia variant","secondary_identifiers":["NCIT:C7401","SCTID:277568007","ICDO:9591/3","UMLS:C0349633","DOID:713","GARD:21249","MedDRA:10019054","MEDGEN:91160"],"synonyms":[{"name":"HCL-V","type":"exact"},{"name":"HCL-v","type":"exact"},{"name":"hairy cell leukemia variant","type":"exact"},{"name":"leukemic reticuloendotheliosis variant","type":"exact"},{"name":"prolymphocytic variant of HCL","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukaemia","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukemia","type":"exact"}],"termid":"MONDO:0017600","xrefs":{"Monarch":{"xref_id":"0017600"}}}


id: MOD:02071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-methionine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-methionine residue","termid":"MOD:02071"}


id: MOD:01984
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-alanine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-alanine.","definition_xrefs":["RESID:AA0621","PubMed:21526839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-L-alanine","synonyms":[{"name":"(2R)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-5-methyl-4-thiahexanedioic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-L-alanine","type":"exact"}],"termid":"MOD:01984"}


id: PBO:0043880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB3 regulatory factor","termid":"PBO:0043880"}


id: PBO:0026848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_snoRNA_gene","termid":"PBO:0026848"}


id: PBO:0079653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 1","termid":"PBO:0079653"}


id: MONDO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hypertensive renal disease","termid":"MONDO:0000959"},{"relation_name":"is_a","term_name":"renal hypertension","termid":"MONDO:0001105"},{"relation_name":"is_a","term_name":"malignant secondary hypertension","termid":"MONDO:0001785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"malignant renovascular hypertension","secondary_identifiers":["DOID:13730","UMLS:C0264643","icd11.foundation:1402842599","MEDGEN:538723"],"synonyms":[{"name":"malignant renal artery stenosis","type":"exact"},{"name":"malignant renal hypertension","type":"exact"}],"termid":"MONDO:0001784","xrefs":{"Monarch":{"xref_id":"0001784"}}}


id: GO:0015016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-[heparan sulfate](n) = adenosine 3',5'-bisphosphate + 2 H+ + N-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n).","definition_xrefs":["EC:2.8.2.8","RHEA:21980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate N-sulfotransferase activity","secondary_identifiers":["GO:0004393","GO:0051910","GO:0015022","MetaCyc:HEPARITIN-SULFOTRANSFERASE-RXN","Reactome:R-HSA-2022860"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:N-desulfoheparin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:heparitin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-HSST activity","type":"related"},{"name":"N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-heparan sulfate sulfotransferase activity","type":"related"},{"name":"PAPS:DSH sulfotransferase activity","type":"related"},{"name":"PAPS:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"[heparan sulphate]-glucosamine N-sulphotransferase activity","type":"exact"},{"name":"desulfoheparin sulfotransferase activity","type":"exact"},{"name":"glucosaminyl N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate 2-N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulphotransferase activity","type":"related"},{"name":"heparin N-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulphotransferase activity","type":"exact"},{"name":"heparitin sulfotransferase activity","type":"exact"}],"termid":"GO:0015016"}


id: MONDO:1011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, cattle","secondary_identifiers":["OMIA:001056-9913"],"termid":"MONDO:1011611","xrefs":{"Monarch":{"xref_id":"1011611"}}}


id: PBO:0088890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine/serine/threonine phosphatase","termid":"PBO:0088890"}


id: PBO:0066206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 20","termid":"PBO:0066206"}


id: GO:0030232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex that binds to the insulin control element (ICE), a DNA sequence element found within the 5'-flanking region of the insulin gene, and activates ICE-mediated transcription.","definition_xrefs":["PMID:7935390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"insulin control element activator complex","synonyms":[{"name":"ICE activator complex","type":"exact"}],"termid":"GO:0030232"}


id: PBO:0057767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2113","termid":"PBO:0057767"}


id: GO:0075318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ascus development, a process that leads to the formation of basidium, a sac-like structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ascus development","termid":"GO:0075318"}


id: GO:0048822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an enucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte development","termid":"GO:0048821"},{"relation_name":"part_of","term_name":"enucleate erythrocyte differentiation","termid":"GO:0043353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte development","synonyms":[{"name":"enucleate RBC development","type":"exact"},{"name":"enucleate red blood cell development","type":"exact"}],"termid":"GO:0048822"}


id: PBO:0077044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor alpha","termid":"PBO:0077044"}


id: MONDO:0012218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dandy-walker malformation with occipital cephalocele, autosomal dominant","secondary_identifiers":["UMLS:C2674987","MESH:C567185","OMIM:609222","MEDGEN:393273"],"synonyms":[{"name":"ADDWOC","type":"exact"},{"name":"Dandy-Walker malformation with occipital cephalocele, autosomal dominant","type":"related"}],"termid":"MONDO:0012218","xrefs":{"Monarch":{"xref_id":"0012218"}}}


id: MONDO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete muscular dystrophy (obsolete MONDO:0004912)","termid":"MONDO:0004912","xrefs":{"Monarch":{"xref_id":"0004912"}}}


id: MONDO:0010492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pituitary gland adenoma in which the cause of the disease is a mutation in the GPR101 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acromegaly","termid":"MONDO:0019933"},{"relation_name":"is_a","term_name":"familial isolated pituitary adenoma","termid":"MONDO:0017824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary adenoma, growth hormone-secreting, 2","secondary_identifiers":["MEDGEN:860846","OMIM:300943","UMLS:C4012409","GARD:15274","DOID:0112007"],"synonyms":[{"name":"GPR101 pituitary gland adenoma","type":"exact"},{"name":"PAGH2","type":"related"},{"name":"PITA2","type":"related"},{"name":"acromegaly due to pituitary adenoma 2","type":"related"},{"name":"acromegaly, X-linked","type":"related"},{"name":"pituitary adenoma 2, GH-secreting","type":"exact"},{"name":"pituitary adenoma 2, Growth hormone-secreting","type":"related"},{"name":"pituitary adenoma 2, growth hormone-secreting","type":"related"},{"name":"pituitary adenoma, Growth hormone-secreting, type 2","type":"exact"},{"name":"pituitary adenoma, growth hormone-secreting, 2","type":"exact"},{"name":"pituitary gland adenoma caused by mutation in GPR101","type":"exact"}],"termid":"MONDO:0010492","xrefs":{"Monarch":{"xref_id":"0010492"}}}


id: MONDO:0022869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronary arteries congenital malformation (obsolete MONDO:0022869)","termid":"MONDO:0022869","xrefs":{"Monarch":{"xref_id":"0022869"}}}


id: GO:0060346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the bone. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"bone trabecula morphogenesis","termid":"GO:0061430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone trabecula formation","synonyms":[{"name":"bone trabecula biogenesis","type":"related"},{"name":"bone trabeculation","type":"exact"},{"name":"skeletal trabecula biogenesis","type":"related"},{"name":"skeletal trabecula formation","type":"exact"},{"name":"skeletal trabeculation","type":"exact"}],"termid":"GO:0060346"}


id: GO:0180011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which dormant, translationally inactive mRNAs become activated, or mRNAs become stabilized, via the elongation of their poly(A) tails in the cytosol.","definition_xrefs":["PMID:21536428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"cytosolic mRNA polyadenylation","termid":"GO:0180011"}


id: PBO:0053455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 407","termid":"PBO:0053455"}


id: PBO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Sod2","termid":"PBO:0000101"}


id: GO:0015262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete taurine channel activity (obsolete GO:0015262)","synonyms":[{"name":"taurine channel activity","type":"exact"}],"termid":"GO:0015262"}


id: FYPO:0003703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of histone deacetylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0005447","FYPO:0000654","FYPO:0000641","FYPO:0000661","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone deacetylase activity","termid":"FYPO:0003703"}


id: PBO:0018015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex subunit Clr1","termid":"PBO:0018015"}


id: PBO:0064375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase, mitochondrial processing subunit beta","termid":"PBO:0064375"}


id: GO:0031340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of vesicle fusion","synonyms":[{"name":"activation of vesicle fusion","type":"narrow"},{"name":"stimulation of vesicle fusion","type":"narrow"},{"name":"up regulation of vesicle fusion","type":"exact"},{"name":"up-regulation of vesicle fusion","type":"exact"},{"name":"upregulation of vesicle fusion","type":"exact"}],"termid":"GO:0031340"}


id: PBO:0078926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-2","termid":"PBO:0078926"}


id: PBO:0002965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set2","termid":"PBO:0002965"}


id: PBO:0063226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH10 divergent transcript","termid":"PBO:0063226"}


id: GO:0005030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neurotrophin, any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth, and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotrophin receptor activity","termid":"GO:0005030"}


id: GO:0034536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-8-methylchromene-2-carboxylate = 2-hydroxy-3-methylbenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0782"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-8-methylchromene-2-carboxylate isomerase activity (obsolete GO:0034536)","termid":"GO:0034536"}


id: PBO:0041540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 98","termid":"PBO:0041540"}


id: MONDO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A history of myocardial infarction in the absence of clinical symptoms and positive electrocardiographic findings.","definition_xrefs":["NCIT:C35400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"silent myocardial infarction","secondary_identifiers":["SCTID:233843008","DOID:5854","UMLS:C0340324","MEDGEN:83307"],"synonyms":[{"name":"silent myocardial infarction","type":"exact"}],"termid":"MONDO:0003678","xrefs":{"Monarch":{"xref_id":"0003678"}}}


id: SO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA less than 200 nucleotides in length.","definition_xrefs":["PMID:30069443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sncRNA","synonyms":[{"name":"Small noncoding RNA","type":"exact"}],"termid":"SO:0002247"}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: PBO:0049936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHIP like 2","termid":"PBO:0049936"}


id: GO:0042851
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-alanine metabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"L-alanine metabolism","type":"exact"}],"termid":"GO:0042851","terms_by_termid":{"GO:0042853":null}}


id: GO:0035445
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The process in which borate is transported across a membrane. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"borate transport","termid":"GO:0046713"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"borate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"borate membrane transport","type":"exact"},{"name":"boron transmembrane transport","type":"related"}],"termid":"GO:0035445","terms_by_termid":{"GO:0140159":null}}


id: PBO:0042980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 6","termid":"PBO:0042980"}


id: FYPO:0004661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0004661)","synonyms":[{"name":"normal protein tyrosine phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004661"}


id: SO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A supercontig that is not been assigned to any ultracontig during a genome assembly project.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supercontig","termid":"SO:0000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unassigned_supercontig","synonyms":[{"name":"unassigned scaffold","type":"related"},{"name":"unassigned supercontig","type":"exact"}],"termid":"SO:0001875"}


id: PBO:0111952
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0111952"}


id: PBO:0058930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7i","termid":"PBO:0058930"}


id: GO:0110098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium import into the mitochondrion.","definition_xrefs":["GOC:sl","PMID:24085037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium import into the mitochondrion","termid":"GO:0110097"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium import into the mitochondrion","termid":"GO:0110098"}


id: PBO:0077562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 269","termid":"PBO:0077562"}


id: MONDO:0800345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 17","secondary_identifiers":["MEDGEN:861997","UMLS:C4013560"],"synonyms":[{"name":"ATFB17","type":"exact"}],"termid":"MONDO:0800345","xrefs":{"Monarch":{"xref_id":"0800345"}}}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: MOD:01310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent light form group.","definition_xrefs":["PubMed:11857757","Unimod:60#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent light form N6-L-lysine","synonyms":[{"name":"GIST-Quat","type":"related"},{"name":"Quaternary amine labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01310"}


id: PBO:0070900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 8","termid":"PBO:0070900"}


id: MOD:01995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-formyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-tryptophan","termid":"MOD:01106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-formyl-L-tryptophan","synonyms":[{"name":"N2FoTrp","type":"exact"}],"termid":"MOD:01995"}


id: PBO:0055883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit A","termid":"PBO:0055883"}


id: MONDO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the extrahepatic bile duct","direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"bile duct adenocarcinoma","termid":"MONDO:0003193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"extrahepatic bile duct adenocarcinoma","secondary_identifiers":["UMLS:C0279659","DOID:3495","NCIT:C7975","MEDGEN:124642"],"synonyms":[{"name":"adenocarcinoma of extrahepatic bile duct","type":"exact"},{"name":"adenocarcinoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct adenocarcinoma","type":"exact"}],"termid":"MONDO:0002665","xrefs":{"Monarch":{"xref_id":"0002665"}}}


id: PBO:0049186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL2 divergent transcript","termid":"PBO:0049186"}


id: MONDO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the vagina. Representative examples include botryoid-type embryonal rhabdomyosarcoma, leiomyosarcoma, and endometrioid stromal sarcoma.","definition_xrefs":["NCIT:C7737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vagina sarcoma","secondary_identifiers":["UMLS:C0238519","MEDGEN:65971","DOID:1901"],"synonyms":[{"name":"sarcoma of the vagina","type":"exact"},{"name":"sarcoma of vagina","type":"exact"},{"name":"vagina sarcoma","type":"exact"},{"name":"vaginal sarcoma","type":"exact"}],"termid":"MONDO:0002140","xrefs":{"Monarch":{"xref_id":"0002140"}}}


id: PBO:0040985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 family apoptosis regulator BOK","termid":"PBO:0040985"}


id: GO:1904286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["PMID:25957689","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"},{"relation_name":"negatively_regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-pyridoxal-5-phosphate linkage","synonyms":[{"name":"down regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"down-regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"downregulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"inhibition of protein-pyridoxal-5-phosphate linkage","type":"narrow"}],"termid":"GO:1904286"}


id: PBO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U-box domain","termid":"PBO:0001356"}


id: GO:2001150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dipeptide transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of dipeptide transport","termid":"GO:2000880"},{"relation_name":"is_a","term_name":"regulation of dipeptide transmembrane transport","termid":"GO:2001148"},{"relation_name":"positively_regulates","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of dipeptide transmembrane transport","synonyms":[{"name":"positive regulation of dipeptide membrane transport","type":"exact"}],"termid":"GO:2001150"}


id: MONDO:0021275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin papilloma","termid":"MONDO:0002536"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"papilloma of eyelid","secondary_identifiers":["icd11.foundation:643260480","NCIT:C4061","MEDGEN:256159","SCTID:314515006","UMLS:C1142491"],"synonyms":[{"name":"eyelid papilloma","type":"exact"},{"name":"papilloma of the eyelid","type":"exact"}],"termid":"MONDO:0021275","xrefs":{"Monarch":{"xref_id":"0021275"}}}


id: PBO:0013465
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similarity to YCL030C is at the C-term, S. pombe his7 is similar to YCl030C at the N-term","termid":"PBO:0013465"}


id: FYPO:0006253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and transfer RNA (tRNA) is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-RNA interaction","termid":"FYPO:0002357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002131","FYPO:0000652"],"is_obsolete":false,"name":"normal tRNA binding","synonyms":[{"name":"normal protein-tRNA interaction","type":"exact"},{"name":"normal protein-transfer RNA interaction","type":"exact"},{"name":"normal transfer RNA binding","type":"exact"}],"termid":"FYPO:0006253"}


id: PBO:0058818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7975","termid":"PBO:0058818"}


id: PBO:0004588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA","termid":"PBO:0004588"}


id: MONDO:0013755
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86980],"is_not":false,"summary":null,"term":"MONDO:0013755"}]},"cv_name":"mondo","definition":"Any de Barsy syndrome in which the cause of the disease is a mutation in the PYCR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"de Barsy syndrome","termid":"MONDO:0017569"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"PYCR1-related de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614438","UMLS:C3280799","GARD:17340","DOID:0070138","Orphanet:293633","MEDGEN:482429"],"synonyms":[{"name":"ARCL3B","type":"exact"},{"name":"De Barsy syndrome B","type":"exact"},{"name":"PYCR1 de Barsy syndrome","type":"exact"},{"name":"PYCR1 deficiency","type":"exact"},{"name":"autosomal recessive cutis laxa type IIIB","type":"related"},{"name":"cutis laxa, autosomal recessive, type 3B","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIIB","type":"related"},{"name":"de Barsy syndrome caused by mutation in PYCR1","type":"exact"},{"name":"pyrroline-5-carboxylate reductase 1 deficiency","type":"exact"}],"termid":"MONDO:0013755","terms_by_termid":{"MONDO:0013755":null},"xrefs":{"Monarch":{"xref_id":"0013755"}}}


id: GO:0015799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of propanediol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Propanediol is a sweet colorless, viscous, hygroscopic liquid used as an antifreeze and in brake fluid; it is also as a humectant in cosmetics and personal care items, although it can be absorbed through the skin with harmful effects.","definition_xrefs":["PMID:24002752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"propanediol transport","termid":"GO:0015799"}


id: GO:0005704
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stretch of densely packed chromatin along the polytene chromosome, visible as a morphologically distinct band.","definition_xrefs":["GOC:bf","PMID:11361342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome band","termid":"GO:0005704"}


id: PR:Q9HDU3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gal10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional protein gal10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.12c","synonyms":[{"name":"Spom972h-gal10","type":"exact"}],"termid":"PR:Q9HDU3"}


id: PBO:0057304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 515-1","termid":"PBO:0057304"}


id: MONDO:0012674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the TLR4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 10","secondary_identifiers":["UMLS:C1969108","MESH:C566935","OMIM:611488","MEDGEN:409758","DOID:0110022"],"synonyms":[{"name":"ARMD10","type":"exact"},{"name":"TLR4 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 10","type":"exact"},{"name":"age-related macular degeneration caused by mutation in TLR4","type":"exact"},{"name":"macular Degeneration, age-related, type 10","type":"exact"},{"name":"macular degeneration, age-related, 10","type":"related"}],"termid":"MONDO:0012674","xrefs":{"Monarch":{"xref_id":"0012674"}}}


id: PBO:0063386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5","termid":"PBO:0063386"}


id: MONDO:0035930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Neu-Laxova syndrome","termid":"MONDO:0000179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"neu-laxova syndrome due to 3-phosphoserine phosphatase deficiency","secondary_identifiers":["MEDGEN:1843313","UMLS:C5680338","Orphanet:583612","GARD:22337"],"synonyms":[{"name":"3-phosphoserine phosphatase deficiency, prenatal form","type":"exact"}],"termid":"MONDO:0035930","xrefs":{"Monarch":{"xref_id":"0035930"}}}


id: PR:Q92368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell differentiation protein RCD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12262:SF0","PRO:DNx","OMA:SCHPO02251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell differentiation protein rcd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.06c","secondary_identifiers":["UniProtKB:Q92368"],"synonyms":[{"name":"Spom972h-RQCD1","type":"exact"}],"termid":"PR:Q92368"}


id: GO:0014828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The distal stomach is composed of the lower body and antrum and develops strong peristaltic phasic contractions that increase in amplitude as they propagate toward the pylorus.","definition_xrefs":["GOC:mtg_muscle","PMID:30252381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"stomach smooth muscle contraction","termid":"GO:0120063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal stomach smooth muscle contraction","termid":"GO:0014828"}


id: FYPO:0003876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the cytokinesis after mitosis checkpoint of a mitotic cell cycle is normal (i.e. indistinguishable from wild type). The cytokinesis after mitosis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0000257","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"normal cytokinesis checkpoint","synonyms":[{"name":"normal cytokinesis after mitosis checkpoint","type":"exact"},{"name":"normal cytokinesis checkpoint activation","type":"related"},{"name":"normal mitotic cell cycle cytokinesis checkpoint","type":"exact"},{"name":"normally activated cytokinesis checkpoint","type":"related"}],"termid":"FYPO:0003876"}


id: GO:1901315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901315)","synonyms":[{"name":"down regulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"down-regulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"downregulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"inhibition of histone H2A K63-linked ubiquitination","type":"narrow"}],"termid":"GO:1901315"}


id: PBO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this is not NADH complex associated in yeast, which do not have the other 40 subunits that are present in that complex in mammals, see associated refs for more info on the human protein","termid":"PBO:0016980"}


id: MONDO:0010063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neurological disorder characterized by the association of slowly progressive spinocerebellar degeneration and corneal dystrophy, manifesting with bilateral corneal opacities (which lead to severe visual impairment), mild intellectual disability, ataxia, gait disturbances, and tremor. Additional manifestations include facial dysmorphism (i.e. triangular face, ptosis, low-set, posteriorly angulated ears, and micrognathia), as well as mild upper motor neuron involvement with hypertonia, lower limb hyperreflexia and extensor plantar responses. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:3177"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"corneal-cerebellar syndrome","secondary_identifiers":["UMLS:C1849087","MEDGEN:341379","OMIM:271310","GARD:1525","icd11.foundation:577494924","MESH:C535472","SCTID:720750004"],"synonyms":[{"name":"Der Kaloustian Jarudi Khoury syndrome","type":"related"},{"name":"Der Kaloustian-Jarudi-Khoury syndrome","type":"exact"},{"name":"corneal cerebellar syndrome","type":"related"},{"name":"corneal dystrophy with spinocerebellar Degeneration","type":"related"},{"name":"corneal-cerebellar syndrome","type":"exact"},{"name":"spinocerebellar degeneration and corneal dystrophy","type":"related"},{"name":"spinocerebellar degeneration corneal dystrophy","type":"related"},{"name":"spinocerebellar degeneration-corneal dystrophy syndrome","type":"exact"}],"termid":"MONDO:0010063","xrefs":{"Monarch":{"xref_id":"0010063"}}}


id: MONDO:0029140
data:
  {"annotated_genes":["SJAG_05278"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86721],"is_not":false,"summary":null,"term":"MONDO:0029140"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618143","DOID:0070382","MEDGEN:1648478","UMLS:C4748357"],"synonyms":[{"name":"GPIBD18","type":"related"},{"name":"developmental and epileptic encephalopathy 95","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 18","type":"exact"}],"termid":"MONDO:0029140","terms_by_termid":{"MONDO:0029140":null},"xrefs":{"Monarch":{"xref_id":"0029140"}}}


id: GO:0072527
data:
  {"annotated_genes":["SJAG_01742","SJAG_03362","SJAG_03213","SJAG_04067","SJAG_01673","SJAG_02047","SJAG_00779","SJAG_04282","SJAG_04264","SJAG_03676","SJAG_00392","SJAG_00694","SJAG_00957","SJAG_03164","SJAG_01970","SJAG_05024","SJAG_04709","SJAG_02593","SJAG_00533","SJAG_03771","SJAG_00197","SJAG_00381","SJAG_00964","SJAG_05029","SJAG_04712","SJAG_04487","SJAG_02420","SJAG_04665","SJAG_04627","SJAG_04866","SJAG_00827","SJAG_04354","SJAG_02406","SJAG_02421","SJAG_04657","SJAG_03538","SJAG_04713","SJAG_00444","SJAG_02887","SJAG_00885","SJAG_02874","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[88129,71971,57568,74337,73720,72277,70358,70085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[59503,61239,61995,57234,59169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[80764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[107573,92775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[68208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[64618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[68210,93310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[70276,70178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[95820,107574,92776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[71370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70279,79844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[68983,92777,71371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[71369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[70278,79817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[79815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[88796],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903931"},{"annotations":[113990,89378],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[74840,87807,89536,115218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006206"},{"annotations":[90992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[107578,105820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[114120,98065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[73717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[90993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008655"},{"annotations":[74294,70518,61723,74373,77507,78777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[67674,78584,113902,113896,66000,116323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[59043,66343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[110760,110759,99852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[80767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[76827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"},{"annotations":[93311,68209,88792,92309,87808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[92310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"},{"annotations":[64617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine-containing compound, i.e. any compound that contains pyrimidine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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compound metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"pyrimidine and derivative metabolic process","type":"exact"},{"name":"pyrimidine-containing compound metabolism","type":"exact"}],"termid":"GO:0072527","terms_by_termid":{"GO:0006206":null,"GO:0006207":null,"GO:0006213":null,"GO:0006223":null,"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006256":null,"GO:0006772":null,"GO:0008655":null,"GO:0009224":null,"GO:0009228":null,"GO:0009229":null,"GO:0009972":null,"GO:0036172":null,"GO:0043097":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046081":null,"GO:0046132":null,"GO:0046135":null,"GO:0046704":null,"GO:0046705":null,"GO:0090180":null,"GO:1903931":null}}


id: PBO:0066618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin Rho GTPase binding protein 2 pseudogene 1","termid":"PBO:0066618"}


id: MONDO:0011727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anorexia nervosa, susceptibility to, 1","secondary_identifiers":["MEDGEN:376139","UMLS:C1847492","OMIM:606788"],"synonyms":[{"name":"AN","type":"related"},{"name":"ANON1","type":"exact"},{"name":"anon","type":"related"},{"name":"anorexia nervosa, susceptibility to","type":"related"},{"name":"anorexia nervosa, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011727","xrefs":{"Monarch":{"xref_id":"0011727"}}}


id: PBO:0074939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 104","termid":"PBO:0074939"}


id: PBO:0091692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase, human COMT catechol homolog 1","termid":"PBO:0091692"}


id: GO:0160017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet rolling.","definition_xrefs":["GOC:sl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"},{"relation_name":"regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of platelet rolling","termid":"GO:0160017"}


id: PBO:0084934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor, component of U4/U6.U5 tri-snRNP; interacts genetically and physically with Prp38p; relocalizes to the cytosol in response to hypoxia; temperature-sensitive phenotype of prp38-1 mutant can be suppressed by human homolog of SPP381, MFAP1","termid":"PBO:0084934"}


id: PBO:0085183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta-subunits of the Snf1p kinase complex; may confer substrate specificity; vacuolar protein containing KIS (Kinase-Interacting Sequence) and ASC (Association with Snf1 kinase Complex) domains involved in protein interactions","termid":"PBO:0085183"}


id: PBO:0073117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 5","termid":"PBO:0073117"}


id: GO:1904480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intestinal absorption.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:12469120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"positively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal absorption","synonyms":[{"name":"activation of intestinal absorption","type":"narrow"},{"name":"up regulation of intestinal absorption","type":"exact"},{"name":"up-regulation of intestinal absorption","type":"exact"},{"name":"upregulation of intestinal absorption","type":"exact"}],"termid":"GO:1904480"}


id: GO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:8600538","ISBN:0781735149","PMID:14680625","PMID:14708592","PMID:7507411","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration","secondary_identifiers":["Reactome:R-HSA-202733"],"synonyms":[{"name":"immune cell migration","type":"exact"},{"name":"immune cell trafficking","type":"exact"},{"name":"leucocyte migration","type":"exact"},{"name":"leucocyte trafficking","type":"exact"},{"name":"leukocyte trafficking","type":"exact"}],"termid":"GO:0050900"}


id: PBO:0049887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 6","termid":"PBO:0049887"}


id: PBO:0058829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8059","termid":"PBO:0058829"}


id: MONDO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)","definition_xrefs":["NCIT:C4325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioblastoma","termid":"MONDO:0002501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"giant cell glioblastoma","secondary_identifiers":["DOID:3074","GARD:20705","icd11.foundation:565094124","MEDGEN:83169","Orphanet:251579","UMLS:C0334588","ICDO:9441/3"],"synonyms":[{"name":"Monstrocellular sarcoma","type":"exact"},{"name":"Monstrocellular sarcoma [obs]","type":"exact"}],"termid":"MONDO:0016682","xrefs":{"Monarch":{"xref_id":"0016682"}}}


id: PBO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad2-dependent checkpoint response","termid":"PBO:0000285"}


id: PBO:0028381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_DNA_N-glycosylase_activity","termid":"PBO:0028381"}


id: PBO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein (predicted)","termid":"PBO:0002444"}


id: PBO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1 like","termid":"PBO:0060384"}


id: PR:O43058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sep1 gene.","definition_xrefs":["UniProtKB:O43058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead protein sep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.12","synonyms":[{"name":"Spom972h-sep1","type":"exact"}],"termid":"PR:O43058"}


id: GO:1990478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultrasonic stimulus.","definition_xrefs":["PMID:20950932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ultrasound","termid":"GO:1990478"}


id: PBO:0068987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 231, pseudogene","termid":"PBO:0068987"}


id: PBO:0052787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 26","termid":"PBO:0052787"}


id: GO:0045694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryo sac egg cell differentiation","synonyms":[{"name":"regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045694"}


id: PBO:0077500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 218","termid":"PBO:0077500"}


id: GO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble fraction (obsolete GO:0005625)","synonyms":[{"name":"soluble","type":"broad"},{"name":"soluble fraction","type":"exact"}],"termid":"GO:0005625"}


id: FYPO:0007758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion lasts longer than normal, continuing into anaphase of mitosis.","definition_xrefs":["PomBase:mah","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic sister chromatid cohesion","synonyms":[{"name":"ectopic cohesion protection during mitosis","type":"related"},{"name":"increased duration of mitotic chromosome cohesion","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"increased duration of mitotic sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"increased duration of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"persistent mitotic sister chromatid cohesion during mitotic anaphase","type":"exact"},{"name":"prolonged mitotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0007758"}


id: GO:0141108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a transporter.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"transporter regulator activity","termid":"GO:0141108"}


id: MONDO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hemangiopericytoma","secondary_identifiers":["SCTID:254923001","NCIT:C4527","DOID:262","UMLS:C5848097","MEDGEN:1847044"],"synonyms":[{"name":"hemangiopericytoma of kidney","type":"exact"},{"name":"hemangiopericytoma of the kidney","type":"exact"},{"name":"kidney hemangiopericytoma","type":"exact"},{"name":"kidney spindle cell tumor","type":"exact"},{"name":"kidney spindle cell tumour","type":"exact"},{"name":"renal hemangiopericytoma","type":"exact"}],"termid":"MONDO:0002365","xrefs":{"Monarch":{"xref_id":"0002365"}}}


id: MONDO:1010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, non-human animal","secondary_identifiers":["OMIA:000337"],"termid":"MONDO:1010323","xrefs":{"Monarch":{"xref_id":"1010323"}}}


id: GO:0032939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to oxidative stress","synonyms":[{"name":"activation of translation in response to oxidative stress","type":"narrow"},{"name":"stimulation of translation in response to oxidative stress","type":"narrow"},{"name":"up regulation of translation in response to oxidative stress","type":"exact"},{"name":"up-regulation of translation in response to oxidative stress","type":"exact"},{"name":"upregulation of translation in response to oxidative stress","type":"exact"}],"termid":"GO:0032939"}


id: PBO:0058024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3974","termid":"PBO:0058024"}


id: PBO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_SAGA_complex_assembly","termid":"PBO:0030401"}


id: PBO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 34","termid":"PBO:0071428"}


id: PBO:0039592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 9","termid":"PBO:0039592"}


id: PBO:0071900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 38","termid":"PBO:0071900"}


id: MONDO:0023699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Apert syndrome","termid":"MONDO:0007041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Maroteaux Fonfria syndrome","secondary_identifiers":["MESH:C536023","MEDGEN:418985","GARD:3397","UMLS:C2931088"],"synonyms":[{"name":"apert syndrome with polydactyly of hands and feet","type":"related"},{"name":"apparent apert syndrome with polydactyly","type":"related"}],"termid":"MONDO:0023699","xrefs":{"Monarch":{"xref_id":"0023699"}}}


id: GO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or both of the regulatory subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein kinase A regulatory subunit binding","synonyms":[{"name":"PKA regulatory subunit binding","type":"exact"},{"name":"protein kinase A anchoring activity","type":"related"}],"termid":"GO:0034237"}


id: PBO:0039838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 8","termid":"PBO:0039838"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: GO:0071519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of actin filament bundle formation that occurs in the context of assembling an actomyosin contractile ring during cytokinesis.","definition_xrefs":["GOC:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actomyosin contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in actomyosin contractile ring formation","type":"related"},{"name":"actin filament bundle assembly involved in cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:0071519"}


id: PBO:0038342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lays_eggs_on","termid":"PBO:0038342"}


id: MONDO:0008265
data:
  {"annotated_genes":["SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86481],"is_not":false,"summary":null,"term":"MONDO:0008265"}]},"cv_name":"mondo","definition":"A polycystic liver disease in which the cause of the disease is a mutation in the PRKCSH gene, and is characterized by the appearance of numerous cysts spread throughout the liver.","definition_xrefs":["Orphanet:2924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic liver disease","termid":"MONDO:0000447"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0000426"],"is_obsolete":false,"name":"polycystic liver disease 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:716196007","MedDRA:10010427","MedDRA:10048834","OMIM:174050","MEDGEN:165781","UMLS:C0887850","DOID:0060980"],"synonyms":[{"name":"ADPCLD","type":"related"},{"name":"PCLD","type":"related"},{"name":"PCLD1","type":"exact"},{"name":"autosomal dominant polycystic liver disease","type":"related"},{"name":"isolated autosomal dominant polycystic liver disease","type":"related"},{"name":"isolated congenital polycystic liver disease","type":"broad"},{"name":"isolated polycystic liver disease","type":"broad"},{"name":"nonsyndromic congenital polycystic liver disease","type":"exact"},{"name":"nonsyndromic polycystic liver disease (disease)","type":"exact"},{"name":"polycystic liver disease","type":"related"},{"name":"polycystic liver disease 1","type":"exact"},{"name":"polycystic liver disease 1 with or without kidney cysts","type":"exact"}],"termid":"MONDO:0008265","terms_by_termid":{"MONDO:0008265":null},"xrefs":{"Monarch":{"xref_id":"0008265"}}}


id: PBO:0051776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCA1 antisense RNA 1","termid":"PBO:0051776"}


id: PBO:0004544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein Thp1-Sac3 complex subunit (predicted)","termid":"PBO:0004544"}


id: GO:0014732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in skeletal muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"},{"relation_name":"is_a","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle atrophy","termid":"GO:0014732"}


id: MONDO:0017665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic disease with myoclonus as a major feature (obsolete MONDO:0017665)","secondary_identifiers":["Orphanet:307067"],"termid":"MONDO:0017665","xrefs":{"Monarch":{"xref_id":"0017665"}}}


id: MONDO:0002704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete appendix adenocarcinoma (obsolete MONDO:0002704)","termid":"MONDO:0002704","xrefs":{"Monarch":{"xref_id":"0002704"}}}


id: PR:Q9USK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.14","synonyms":[{"name":"Spom972h-cwf20","type":"exact"},{"name":"complexed with cdc5 protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK4"}


id: MONDO:0004835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrotizing fasciitis is a serious infection of the skin, the tissue just beneath the skin (subcutaneous tissue), and the tissue that covers internal organs (fascia). Necrotizing fasciitis can be caused by several different types of bacteria, and the infection can arise suddenly and spread quickly. Early signs include flu-like symptoms and redness and pain around the infection site. A prompt diagnosis and treatment are essential.If the infection is not treated promptly, it can lead to multiple organ failure and death. Treatment typically includes intravenous (IV) antibiotics and surgery to remove infected and dead tissue.","direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing fasciitis","secondary_identifiers":["UMLS:C0238124","ICD10CM:M72.6","MEDGEN:66763","ICD9:728.86","NCIT:C84916","DOID:9602","MESH:D019115","SCTID:52486002"],"termid":"MONDO:0004835","xrefs":{"Monarch":{"xref_id":"0004835"}}}


id: PBO:0029734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_aculeacin_A","termid":"PBO:0029734"}


id: MONDO:1011130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis, non-human animal","termid":"MONDO:1010284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allergic rhinitis, cattle","secondary_identifiers":["OMIA:000027-9913"],"termid":"MONDO:1011130","xrefs":{"Monarch":{"xref_id":"1011130"}}}


id: GO:0102841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:11607123"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity (obsolete GO:0102841)","termid":"GO:0102841"}


id: GO:0102009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a dipeptide with proline at the C-terminal = L-proline + a standard alpha amino acid.","definition_xrefs":["EC:3.4.13.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptidase activity","termid":"GO:0016805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"proline dipeptidase activity","secondary_identifiers":["RHEA:76407","MetaCyc:3.4.13.9-RXN"],"termid":"GO:0102009"}


id: GO:0021788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dgh","PMID:14699587","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in neural tube","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in neural tube","type":"exact"}],"termid":"GO:0021788"}


id: GO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete minor histocompatibility antigen (obsolete GO:0005558)","synonyms":[{"name":"minor histocompatibility antigen","type":"exact"}],"termid":"GO:0005558"}


id: PBO:0090248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GAP, GTPase-activating protein Spa2","termid":"PBO:0090248"}


id: PATO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased temperature","secondary_identifiers":["PATO:0000677"],"synonyms":[{"name":"cold","type":"exact"},{"name":"low temperature","type":"exact"}],"termid":"PATO:0001306"}


id: PBO:0017671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR79 (predicted)","termid":"PBO:0017671"}


id: PBO:0076274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 2","termid":"PBO:0076274"}


id: PBO:0091035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem8","termid":"PBO:0091035"}


id: GO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from a muscle cell. A muscle cell is a mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns.","definition_xrefs":["PMID:15930100","PMID:22464329","GOC:kmv","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"muscle cell projection","synonyms":[{"name":"muscle arm","type":"narrow"},{"name":"myocyte projection","type":"exact"},{"name":"myopodia","type":"narrow"}],"termid":"GO:0036194"}


id: PBO:0060941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2 like 3 pseudogene 1","termid":"PBO:0060941"}


id: GO:1905529
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uracil import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:26536126","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"uracil import across plasma membrane","termid":"GO:0098721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905529","terms_by_termid":{"GO:1905530":null}}


id: FYPO:0002020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation","type":"related"},{"name":"increased RNA level during nitrogen depletion","type":"exact"},{"name":"increased RNA level during nitrogen deprivation","type":"exact"},{"name":"increased transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002020"}


id: PBO:0004646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase (predicted)","termid":"PBO:0004646"}


id: MONDO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy that is characterized by frequent seizures of multiple types, including nocturnal focal motor and fronto-parietal opercular seizures, and daytime focal motor seizures with negative myoclonus and atypical absence seizures. Centrotemporal sharp waves are seen on EEG. During the phase of the epilepsy when seizures are frequent, neuropsychological deficits and motor impairment may be present. These deficits improve when seizures remit.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"atypical childhood epilepsy with centrotemporal spikes","synonyms":[{"name":"atonic-benign childhood epilepsy with centrotemporal spikes","type":"exact"},{"name":"atypical benign partial epilepsy of childhood","type":"exact"},{"name":"pseudo-Lennox syndrome","type":"exact"}],"termid":"MONDO:0100020","xrefs":{"Monarch":{"xref_id":"0100020"}}}


id: GO:0008270
data:
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id: MONDO:0859267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive cancer predisposition syndrome characterized by the onset of various types of tumors or malignancies in young adulthood. The most common clinical manifestations include acute myeloid leukemia (AML), myelodysplastic syndrome, colorectal adenomatous polyposis and carcinoma, and uveal melanoma.","definition_xrefs":["OMIM:619975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor predisposition syndrome 2","secondary_identifiers":["Orphanet:661526","MEDGEN:1823959","UMLS:C5774186"],"synonyms":[{"name":"MANS","type":"exact"},{"name":"MBD4-associated neoplasia syndrome","type":"exact"},{"name":"MBD4-related recessive tumor predisposition syndrome","type":"exact"},{"name":"TPDS2","type":"exact"}],"termid":"MONDO:0859267","xrefs":{"Monarch":{"xref_id":"0859267"}}}


id: FYPO:0001451
data:
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id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: GO:0019469
data:
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id: PBO:0075198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 10","termid":"PBO:0075198"}


id: GO:0003798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, bacterial cells, but which is only expressed in males.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete male-specific antibacterial peptide activity (obsolete GO:0003798)","synonyms":[{"name":"male-specific antibacterial peptide activity","type":"exact"}],"termid":"GO:0003798"}


id: PBO:0054639
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2044","termid":"PBO:0054639"}


id: PBO:0039917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 17","termid":"PBO:0039917"}


id: PBO:0086696
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id: PBO:0062272
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id: PomGeneEx:0000024
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id: GO:0090449
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id: MONDO:1011761
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id: PBO:0044318
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id: PBO:0040532
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id: GO:1903866
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id: GO:0060893
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id: GO:0052624
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id: GO:0102102
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id: GO:0062028
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id: PBO:0085238
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id: GO:0160089
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id: PR:Q09911
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id: PBO:0049428
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id: MONDO:0015159
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disability","type":"exact"}],"termid":"MONDO:0015159","terms_by_termid":{"MONDO:0007387":null,"MONDO:0007617":null,"MONDO:0007621":null,"MONDO:0007843":null,"MONDO:0008684":null,"MONDO:0008879":null,"MONDO:0009026":null,"MONDO:0009479":null,"MONDO:0009485":null,"MONDO:0009514":null,"MONDO:0009622":null,"MONDO:0009736":null,"MONDO:0009910":null,"MONDO:0010035":null,"MONDO:0010221":null,"MONDO:0010286":null,"MONDO:0010306":null,"MONDO:0010355":null,"MONDO:0010370":null,"MONDO:0010465":null,"MONDO:0010466":null,"MONDO:0010477":null,"MONDO:0010485":null,"MONDO:0010496":null,"MONDO:0010574":null,"MONDO:0010655":null,"MONDO:0011053":null,"MONDO:0011213":null,"MONDO:0011365":null,"MONDO:0011402":null,"MONDO:0011640":null,"MONDO:0012099":null,"MONDO:0012399":null,"MONDO:0012516":null,"MONDO:0012555":null,"MONDO:0013256":null,"MONDO:0013563":null,"MONDO:0013578":null,"MONDO:0013812":null,"MONDO:0013819":null,"MONDO:0013820":null,"MONDO:0013821":null,"MONDO:0013864":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014165":null,"MONDO:0014238":null,"MONDO:0014273":null,"MONDO:0014296":null,"MONDO:0014336":null,"MONDO:0014466":null,"MONDO:0014529":null,"MONDO:0014558":null,"MONDO:0014601":null,"MONDO:0014602":null,"MONDO:0014605":null,"MONDO:0014609":null,"MONDO:0014700":null,"MONDO:0014716":null,"MONDO:0014751":null,"MONDO:0014757":null,"MONDO:0014838":null,"MONDO:0014848":null,"MONDO:0014881":null,"MONDO:0014886":null,"MONDO:0014936":null,"MONDO:0015012":null,"MONDO:0024567":null,"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0030912":null,"MONDO:0032702":null,"MONDO:0032787":null,"MONDO:0032808":null,"MONDO:0032912":null,"MONDO:0034106":null,"MONDO:0044319":null,"MONDO:0044646":null,"MONDO:0044701":null,"MONDO:0054636":null,"MONDO:0060502":null,"MONDO:0060568":null,"MONDO:0060627":null,"MONDO:0957921":null},"xrefs":{"Monarch":{"xref_id":"0015159"}}}


id: PBO:0054938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2352","termid":"PBO:0054938"}


id: FYPO:0003747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during meiosis, and that contain determinant of selective removal (DSR) sequences, measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:24713849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal level of DSR-containing meiotic gene mRNA during vegetative growth","synonyms":[{"name":"normal DSR-containing meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"normal level of DSR-containing meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"normal level of DSR-containing meiotic gene RNA during vegetative growth","type":"exact"},{"name":"normal level of DSR-containing meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of DSR-containing meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"normal level of DSR-containing meiotic nuclear division gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0003747"}


id: PBO:0068945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 189, pseudogene","termid":"PBO:0068945"}


id: PBO:0091450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly named as mtx1 with MTX1 human ortholog","termid":"PBO:0091450"}


id: PBO:0069529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 798, pseudogene","termid":"PBO:0069529"}


id: MONDO:0013632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 13q34.","definition_xrefs":["DOID:0110562","PMID:19183916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 33","secondary_identifiers":["MEDGEN:854638","UMLS:C3887930","GARD:18135","OMIM:614211"],"synonyms":[{"name":"DFNA33","type":"narrow"},{"name":"autosomal dominant deafness 33","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 33","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 33","type":"narrow"},{"name":"deafness, autosomal dominant 33","type":"narrow"}],"termid":"MONDO:0013632","xrefs":{"Monarch":{"xref_id":"0013632"}}}


id: PBO:0068643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 24, pseudogene","termid":"PBO:0068643"}


id: MONDO:0007984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome is characterized by metaphyseal dysplasia associated with short stature and facial dysmorphism (a beaked nose, short philtrum, thin lips, maxillary hypoplasia, dystrophic yellowish teeth) and acral anomalies (short fifth metacarpals and/or short middle phalanges of fingers two and five). It has been described in several members spanning four generations of a French-Canadian family. The syndrome is likely to be transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome","secondary_identifiers":["UMLS:C3549874","MEDGEN:762788","DOID:0111513","OMIM:156510","GARD:3568"],"synonyms":[{"name":"MDMHB","type":"related"},{"name":"metaphyseal dysplasia maxillary hypoplasia brachydactyly","type":"related"},{"name":"metaphyseal dysplasia with maxillary hypoplasia with or without brachydactyly","type":"related"}],"termid":"MONDO:0007984","xrefs":{"Monarch":{"xref_id":"0007984"}}}


id: MONDO:0017263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A inherited ichthyosis that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited ichthyosis syndromic form (obsolete MONDO:0017263)","secondary_identifiers":["icd11.foundation:488102959","Orphanet:281085"],"synonyms":[{"name":"syndrome associated with inherited ichthyosis","type":"exact"},{"name":"syndromic inherited ichthyosis","type":"exact"}],"termid":"MONDO:0017263","xrefs":{"Monarch":{"xref_id":"0017263"}}}


id: GO:0106048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of acetylspermadine by the removal of acetyl groups.","definition_xrefs":["PMID:28516954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine deacetylation","termid":"GO:0106047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine deacetylation","synonyms":[{"name":"N8-acetylspermidine deacetylation","type":"exact"}],"termid":"GO:0106048"}


id: PATO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's cartilage quantities.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cartilaginous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilaginous","termid":"PATO:0001449"}


id: GO:0030856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell differentiation","termid":"GO:0030856"}


id: GO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a component of the complement pathway binding to a complement receptor. Such components include both whole complement proteins and fragments of complement proteins generated through the activity of the complement pathway.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"complement receptor mediated signaling pathway","synonyms":[{"name":"complement receptor mediated signalling pathway","type":"exact"},{"name":"immune response-regulating cell surface receptor signalling pathway","type":"broad"}],"termid":"GO:0002430"}


id: GO:0140205
data:
  {"annotated_genes":["SJAG_01660","SJAG_01983","SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[95856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[108299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[103329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of an oligopeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"oligopeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140205","terms_by_termid":{"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:1901583":null}}


id: PBO:0016519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog Gga21","termid":"PBO:0016519"}


id: PBO:0055201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2626","termid":"PBO:0055201"}


id: PBO:0070606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 74","termid":"PBO:0070606"}


id: FYPO:0005698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from the equatorial microtubule organizing center does not occur.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","termid":"FYPO:0004619"},{"relation_name":"is_a","term_name":"abolished cytoplasmic microtubule nucleation","termid":"FYPO:0005693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abolished microtubule nucleation from eMTOC","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation from eMTOC","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing centre","type":"exact"},{"name":"microtubule nucleation from eMTOC abolished","type":"exact"}],"termid":"FYPO:0005698"}


id: MONDO:0012022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 4","secondary_identifiers":["MEDGEN:331228","DOID:0080398","UMLS:C1842143","MESH:C564251","OMIM:608371"],"synonyms":[{"name":"OFC4","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 4","type":"related"},{"name":"orofacial cleft 4","type":"exact"}],"termid":"MONDO:0012022","xrefs":{"Monarch":{"xref_id":"0012022"}}}


id: PR:Q9UTM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox1101 gene.","definition_xrefs":["UniProtKB:Q9UTM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rsm22-cox11 tandem protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.04c","synonyms":[{"name":"Spom972h-cox1101","type":"exact"}],"termid":"PR:Q9UTM2"}


id: PR:O14108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein eta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.10","synonyms":[{"name":"Spom972h-eta2","type":"exact"}],"termid":"PR:O14108"}


id: PBO:0084545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the protein disulfide isomerase (PDI) family; interacts with and inhibits the chaperone activity of Cne1p; MPD1 overexpression in a pdi1 null mutant suppresses defects in Pdi1p functions such as carboxypeptidase Y maturation","termid":"PBO:0084545"}


id: GO:0044230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An envelope that surrounds a bacterial host cell and includes the host cytoplasmic membrane and everything external, encompassing the host periplasmic space, host cell wall, and host outer membrane if present.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell envelope","termid":"GO:0044230"}


id: PBO:0045002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death inducer-obliterator 1","termid":"PBO:0045002"}


id: PBO:0038824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 30","termid":"PBO:0038824"}


id: MONDO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm with neuroendocrine differentiation that arises from the uterine corpus. It includes carcinoid tumor, small cell carcinoma pulmonary type, and large cell neuroendocrine carcinoma.","definition_xrefs":["NCIT:C126771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:925580","UMLS:C4288048"],"synonyms":[{"name":"body of uterus NET","type":"exact"},{"name":"body of uterus neuroendocrine neoplasm","type":"exact"},{"name":"body of uterus neuroendocrine tumor","type":"exact"},{"name":"body of uterus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"body of uterus neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of body of uterus","type":"exact"},{"name":"uterine corpus neuroendocrine neoplasm","type":"exact"},{"name":"uterine corpus neuroendocrine tumor","type":"exact"},{"name":"uterine corpus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0021650","xrefs":{"Monarch":{"xref_id":"0021650"}}}


id: MONDO:0006395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by tubular and villous architectural patterns. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C5620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"},{"relation_name":"is_a","term_name":"colorectal tubulovillous adenoma","termid":"MONDO:0024662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal tubulovillous adenoma","secondary_identifiers":["UMLS:C1335691","SCTID:448428002","MEDGEN:277578","EFO:1000505"],"synonyms":[{"name":"Villotubular adenoma of rectum","type":"exact"},{"name":"Villotubular adenoma of the rectum","type":"exact"},{"name":"rectal Villotubular adenoma","type":"exact"},{"name":"rectal tubulovillous adenoma","type":"exact"},{"name":"tubulovillous adenoma of rectum","type":"exact"},{"name":"tubulovillous adenoma of the rectum","type":"exact"}],"termid":"MONDO:0006395","xrefs":{"Monarch":{"xref_id":"0006395"}}}


id: MOD:00678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an hydroxylated L-proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated proline","synonyms":[{"name":"HyPro","type":"exact"}],"termid":"MOD:00678"}


id: PATO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity which relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"viscous","termid":"PATO:0000998"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased viscosity","synonyms":[{"name":"high viscosity","type":"exact"}],"termid":"PATO:0001693"}


id: PBO:0057896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-1","termid":"PBO:0057896"}


id: GO:1905799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["GOC:TermGenie","PMID:27930654","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intraciliary retrograde transport","synonyms":[{"name":"regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905799"}


id: GO:0032626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-22 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-22 production","secondary_identifiers":["GO:0042239","GO:0072620"],"synonyms":[{"name":"IL-22 production","type":"exact"},{"name":"IL22 production","type":"exact"},{"name":"ILTIF production","type":"exact"},{"name":"ZCYTO18 production","type":"narrow"},{"name":"interleukin-22 biosynthetic process","type":"narrow"},{"name":"interleukin-22 secretion","type":"narrow"}],"termid":"GO:0032626"}


id: GO:0072013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomus over time from its initial formation until its mature state. The glomus forms from the splanchnic intermediate mesoderm and is the vascularized filtration unit, filtering the blood before it enters the tubules. The glomus is external to the nephron and extends over more than one body segment.","definition_xrefs":["PMID:10572058","XAO:0000318","PMID:9268568","GOC:mtg_kidney_jan10","PMID:15647339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomus development","synonyms":[{"name":"pronephric glomus development","type":"exact"}],"termid":"GO:0072013"}


id: GO:1990616
data:
  {"annotated_genes":["SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75840],"is_not":false,"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium ions out of mitochondrial matrix into the cytosol by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:25585246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial magnesium ion transmembrane transport","termid":"GO:0045016"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"magnesium ion export from mitochondrion","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"magnesium ion efflux from mitochondrion","type":"exact"}],"termid":"GO:1990616","terms_by_termid":{"GO:1990616":null}}


id: MONDO:0020252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"essential strabismus","secondary_identifiers":["Orphanet:98682"],"termid":"MONDO:0020252","xrefs":{"Monarch":{"xref_id":"0020252"}}}


id: GO:0021950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that repel a precerebellar neuron as a component of the process of tangential migration.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in precerebellar neuron migration","synonyms":[{"name":"negative chemotaxis involved in precerebellar neuron migration","type":"exact"}],"termid":"GO:0021950"}


id: PBO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB antisense RNA 1","termid":"PBO:0060234"}


id: MONDO:0008835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, short stature, and elevated IgA","secondary_identifiers":["UMLS:C1859647","MESH:C565934","OMIM:208600","MEDGEN:395313"],"synonyms":[{"name":"asthma, short stature, and elevated IgA","type":"exact"}],"termid":"MONDO:0008835","xrefs":{"Monarch":{"xref_id":"0008835"}}}


id: GO:0043879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycolate from one side of a membrane to the other. Glycolate is the smallest alpha-hydroxy acid (AHA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycolate transmembrane transporter activity","synonyms":[{"name":"glcA","type":"related"},{"name":"glycolate permease","type":"related"},{"name":"glycolic acid transmembrane transporter activity","type":"exact"},{"name":"hydroxyacetic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0043879"}


id: MONDO:0006856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from mesothelial cells. Mesothelial cells are the lining cells of the pleura and peritoneum. -- 2003","definition_xrefs":["NCIT:C3786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelial neoplasm","secondary_identifiers":["UMLS:C3714739","EFO:1001044","MESH:D018301","ICD10CM:C45-C49","MEDGEN:811450"],"synonyms":[{"name":"mesothelial neoplasm","type":"exact"},{"name":"mesothelial tumor","type":"exact"},{"name":"mesothelial tumour","type":"exact"}],"termid":"MONDO:0006856","xrefs":{"Monarch":{"xref_id":"0006856"}}}


id: PBO:0075062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-25","termid":"PBO:0075062"}


id: GO:1905018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["PMID:1665486","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of methionine-tRNA ligase activity (obsolete GO:1905018)","synonyms":[{"name":"regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"regulation of MetRS activity","type":"exact"},{"name":"regulation of methionine translase activity","type":"exact"},{"name":"regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905018"}


id: PBO:0051391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant/OR22-1 (pseudogene)","termid":"PBO:0051391"}


id: GO:0038149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 2 (CCL2) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 2 receptor activity","synonyms":[{"name":"CCL2 receptor activity","type":"exact"}],"termid":"GO:0038149"}


id: PBO:0029602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transporter_activity","termid":"PBO:0029602"}


id: PBO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion calcium channel Trp1322","termid":"PBO:0034811"}


id: PBO:0114948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent alpha-hydroxy acid dehydrogenase, probable lactate dehydrogenase","termid":"PBO:0114948"}


id: PBO:0038402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_subfunction","termid":"PBO:0038402"}


id: PBO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.41","termid":"PBO:0000723"}


id: GO:0052143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis on or near host involved in symbiotic interaction (obsolete GO:0052143)","synonyms":[{"name":"chemotaxis on or near host during symbiotic interaction","type":"related"}],"termid":"GO:0052143"}


id: PBO:0041866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 12 (gene/pseudogene)","termid":"PBO:0041866"}


id: FYPO:0005872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the septum is in two asymmetrically located parts and does not completely bisect the cell. Arises when septum assembly begins at two sites which are not on opposite sides of the medial cortex and terminates prematurely on both sides.","definition_xrefs":["PomBase:mah","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"incomplete septum formed from asymmetrically located sites","synonyms":[{"name":"abnormal septum site selection from asymmetrically located sites, forming incomplete septum","type":"related"},{"name":"incomplete division septum formed from asymmetrically located sites","type":"exact"},{"name":"incomplete septum formed from asymmetrically located sites during mitotic cell cycle","type":"related"},{"name":"incomplete septum formed from asymmetrically located sites during vegetative growth","type":"exact"}],"termid":"FYPO:0005872"}


id: MONDO:0043287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstruction of the blood flow in the superior vena cava caused by a malignant neoplasm, thrombosis, or aneurysm. It is a medical emergency requiring immediate treatment. Signs and symptoms include swelling and cyanosis of the face, neck, and upper arms, cough, orthopnea, and headache.","definition_xrefs":["NCIT:C3396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superior vena cava syndrome","secondary_identifiers":["UMLS:C0038833","MESH:D013479","SCTID:63363004","MEDGEN:52576"],"synonyms":[{"name":"SVC obstruction","type":"related"},{"name":"SVC syndrome","type":"related"},{"name":"SVCS","type":"related"},{"name":"superior vena cava obstruction","type":"related"},{"name":"superior vena cava syndrome","type":"exact"},{"name":"superior vena cava thrombosis","type":"related"}],"termid":"MONDO:0043287","xrefs":{"Monarch":{"xref_id":"0043287"}}}


id: PBO:0091554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase","termid":"PBO:0091554"}


id: MONDO:0700103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional disorder, non-human animal","termid":"MONDO:1011338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nutritional deficiency disease, non-human animal","termid":"MONDO:0700103","xrefs":{"Monarch":{"xref_id":"0700103"}}}


id: GO:0160225
data:
  {"annotated_genes":["SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112839],"is_not":false,"summary":null,"term":"GO:0160225"}]},"cv_name":"molecular_function","definition":"Unwinding G-quadruplex structures in nucleic acids. A G-quadruplex is a specialized structure formed in DNA/RNA when sequences rich in guanine (G) assemble into a unique four-stranded arrangement.","definition_xrefs":["PMID:1324186","PMID:26883636","PMID:34113828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a nucleic acid","termid":"GO:0140640"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"G-quadruplex unwinding activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-quadruplex resolving activity","type":"exact"},{"name":"G4 unwinding activity","type":"exact"}],"termid":"GO:0160225","terms_by_termid":{"GO:0160225":null}}


id: PBO:0081161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein 2","termid":"PBO:0081161"}


id: GO:0052933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome cL] + a primary alcohol = 2 [Fe(II)cytochrome cL] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c(L)) activity","secondary_identifiers":["GO:0052931","EC:1.1.2.7","GO:0052932","KEGG_REACTION:R10713","MetaCyc:RXN-11332","GO:0052930"],"synonyms":[{"name":"2-chloroethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"alcohol:cytochrome c(L) oxidoreductase activity","type":"exact"},{"name":"ethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"methanol dehydrogenase activity","type":"narrow"},{"name":"methanol ferricytochrome-c oxidoreductase activity","type":"narrow"}],"termid":"GO:0052933"}


id: MONDO:1012379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"guttural pouch tympany, non-human animal","termid":"MONDO:1011929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guttural pouch tympany, horse","secondary_identifiers":["OMIA:001408-9796"],"termid":"MONDO:1012379","xrefs":{"Monarch":{"xref_id":"1012379"}}}


id: GO:0034995
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consist of complement components C5b6 and C7 stably inserted in a cell membrane. Formation of the SC5b-7 complex is the first phase of membrane attack complex assembly.","definition_xrefs":["PMID:10090939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"SC5b-7 complex","termid":"GO:0034995"}


id: PBO:0016113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin involved in G1","termid":"PBO:0016113"}


id: PBO:0073371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTAD3 antisense RNA 1","termid":"PBO:0073371"}


id: PR:Q9US49
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ecdysoneless that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13060:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ecdysoneless homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.10c","secondary_identifiers":["UniProtKB:Q9US49"],"synonyms":[{"name":"SPAC1002.10c","type":"related"},{"name":"Spom972h-ECD","type":"exact"}],"termid":"PR:Q9US49"}


id: PBO:0058727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6855","termid":"PBO:0058727"}


id: MONDO:0012566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 11","secondary_identifiers":["UMLS:C1970512","MEDGEN:370932","OMIM:610836"],"synonyms":[{"name":"AUTS11","type":"exact"},{"name":"autism susceptibility 11","type":"exact"},{"name":"autism, susceptibility to, 11","type":"exact"}],"termid":"MONDO:0012566","xrefs":{"Monarch":{"xref_id":"0012566"}}}


id: PBO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aph-1 homolog B, gamma-secretase subunit","termid":"PBO:0039698"}


id: PBO:0058288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4663","termid":"PBO:0058288"}


id: MONDO:0011278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bile duct cysts (obsolete MONDO:0011278)","termid":"MONDO:0011278","xrefs":{"Monarch":{"xref_id":"0011278"}}}


id: MONDO:0016931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 10 disorder","termid":"MONDO:0700017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 10","secondary_identifiers":["Orphanet:262648","GARD:20851","SCTID:726349006","UMLS:C4518498","MEDGEN:1384114"],"synonyms":[{"name":"partial trisomy of chromosome 10","type":"exact"}],"termid":"MONDO:0016931","xrefs":{"Monarch":{"xref_id":"0016931"}}}


id: MONDO:0700071
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87020,87019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[87014,87013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[87016,87017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the POMT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002320","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"myopathy caused by variation in POMT2","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"POMT2 myopathy","type":"exact"},{"name":"POMT2-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in POMT2","type":"exact"}],"termid":"MONDO:0700071","terms_by_termid":{"MONDO:0013154":null,"MONDO:0013160":null,"MONDO:0013162":null},"xrefs":{"Monarch":{"xref_id":"0700071"}}}


id: PBO:0005273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein Negative Regulator","termid":"PBO:0005273"}


id: GO:0098663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transmembrane transporter activity that is involved in importing some substance into a cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane transporter activity involved in import into cell (obsolete GO:0098663)","termid":"GO:0098663"}


id: PBO:0049617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 20","termid":"PBO:0049617"}


id: PBO:0114867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly chaperone Ssc1","termid":"PBO:0114867"}


id: PR:O60178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nta1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.03c","synonyms":[{"name":"NT-amidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nta1","type":"exact"}],"termid":"PR:O60178"}


id: PR:Q9UTK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTK7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC E3 ubiquitin ligase complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.02c","synonyms":[{"name":"Spom972h-dsc2","type":"exact"},{"name":"UBA domain-containing protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"defective for SREBP cleavage protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK7"}


id: PBO:0067970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 272","termid":"PBO:0067970"}


id: MONDO:0012929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Compton-North congenital myopathy","secondary_identifiers":["DOID:0080101","UMLS:C2675527","GARD:17111","MESH:C567261","Orphanet:210163","MEDGEN:393406","OMIM:612540"],"synonyms":[{"name":"Compton-North congenital myopathy","type":"exact"},{"name":"MYPCN","type":"related"},{"name":"congenital lethal myopathy, Compton-North type","type":"related"},{"name":"myopathy, congenital, Compton-NORTH","type":"related"}],"termid":"MONDO:0012929","xrefs":{"Monarch":{"xref_id":"0012929"}}}


id: SO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pi helix has 4.1 residues per turn and a translation of 1.15 (=0.115 nm) along the helical axis. The N-H group of an amino acid forms a hydrogen bond with the C=O group of the amino acid five residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"pi_helix","secondary_identifiers":["http://en.wikipedia.org/wiki/Pi_helix","BS:00153"],"synonyms":[{"name":"pi helix","type":"exact"}],"termid":"SO:0001118"}


id: GO:0000109
data:
  {"annotated_genes":["SJAG_03618","SJAG_03454","SJAG_03206","SJAG_03612","SJAG_02828","SJAG_01049","SJAG_00512","SJAG_00901","SJAG_02334","SJAG_04540","SJAG_00500","SJAG_01480","SJAG_03613","SJAG_04147","SJAG_01887","SJAG_00995","SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91201,111462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070912"},{"annotations":[88700,91202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070913"},{"annotations":[76010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070522"},{"annotations":[70438,75314,76009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000110"},{"annotations":[73058,72581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000111"},{"annotations":[103467,92508,70671,112389,90226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000112"},{"annotations":[117008,116987,111551,116986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000113"},{"annotations":[73059,72582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"Any complex formed of proteins that act in nucleotide-excision repair.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01480":null,"SJAG_01887":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_03612":null,"SJAG_03613":null,"SJAG_03618":null,"SJAG_04147":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleotide-excision repair complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UvrB-UvrC complex","type":"narrow"},{"name":"UvrBC complex","type":"narrow"}],"termid":"GO:0000109","terms_by_termid":{"GO:0000110":null,"GO:0000111":null,"GO:0000112":null,"GO:0000113":null,"GO:0070522":null,"GO:0070912":null,"GO:0070913":null,"GO:0071942":null}}


id: GO:0010153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell expansion that results in an increase in cell size along the axis of an organ in a polarized fashion.","definition_xrefs":["PMID:11978864"],"gene_count":0,"genotype_count":0,"name":"obsolete polar cell elongation (obsolete GO:0010153)","synonyms":[{"name":"polar cell elongation","type":"exact"},{"name":"polarity-dependent cell elongation","type":"narrow"}],"termid":"GO:0010153"}


id: PBO:0027844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027844"}


id: PBO:0057931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3658","termid":"PBO:0057931"}


id: PBO:0088163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE (vesicle specific SNAP receptor); localized to the endoplasmic reticulum membrane and necessary for vesicular transport from the ER to the Golgi; required for efficient nuclear fusion during mating","termid":"PBO:0088163"}


id: PBO:0004778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit F (predicted)","termid":"PBO:0004778"}


id: PATO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000272 relative neurobehavioral function (obsolete PATO:0000272)","termid":"PATO:0000272"}


id: GO:1903277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion export across the plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17095720","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion export across plasma membrane","termid":"GO:1903276"},{"relation_name":"negatively_regulates","term_name":"sodium ion export across plasma membrane","termid":"GO:0036376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of sodium ion export across plasma membrane","secondary_identifiers":["GO:1903274"],"synonyms":[{"name":"down regulation of sodium export","type":"related"},{"name":"down regulation of sodium ion export","type":"related"},{"name":"down regulation of sodium ion export from cell","type":"exact"},{"name":"down-regulation of sodium export","type":"related"},{"name":"down-regulation of sodium ion export","type":"related"},{"name":"down-regulation of sodium ion export from cell","type":"exact"},{"name":"downregulation of sodium export","type":"related"},{"name":"downregulation of sodium ion export","type":"related"},{"name":"downregulation of sodium ion export from cell","type":"exact"},{"name":"inhibition of sodium export","type":"narrow"},{"name":"inhibition of sodium ion export","type":"narrow"},{"name":"inhibition of sodium ion export from cell","type":"narrow"},{"name":"negative regulation of sodium export","type":"related"},{"name":"negative regulation of sodium ion export","type":"related"},{"name":"negative regulation of sodium ion export from cell","type":"exact"}],"termid":"GO:1903277"}


id: PBO:0045332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK8 antisense RNA 1","termid":"PBO:0045332"}


id: PBO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1 (predicted)","termid":"PBO:0018083"}


id: PBO:0046362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain containing 1","termid":"PBO:0046362"}


id: PR:O75004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc24 gene.","definition_xrefs":["UniProtKB:O75004","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.07c","synonyms":[{"name":"Spom972h-cdc24","type":"exact"}],"termid":"PR:O75004"}


id: GO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell chemotaxis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell migration","termid":"GO:0014912"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell chemotaxis","termid":"GO:0071671"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell chemotaxis","synonyms":[{"name":"down regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"down-regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"downregulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"inhibition of smooth muscle cell chemotaxis","type":"narrow"}],"termid":"GO:0071672"}


id: GO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels","termid":"GO:0010691"}


id: PATO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance quality inhering in a bearer by virtue of the bearer's resistance to a stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to","termid":"PATO:0001046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistant to","synonyms":[{"name":"resistant","type":"exact"}],"termid":"PATO:0001178"}


id: GO:0140020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses DNA methyltransferase activity.","definition_xrefs":["PMID:20939822","PMID:24947342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA methyltransferase complex","termid":"GO:0140020"}


id: SO:1001280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located upstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_recoding_site","synonyms":[{"name":"five prime recoding site","type":"exact"}],"termid":"SO:1001280"}


id: GO:1902012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(ribitol phosphate) teichoic acid.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00790","PMID:11882717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"poly(ribitol phosphate) teichoic acid metabolic process","termid":"GO:1902011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"poly(ribitol phosphate) teichoic acid biosynthetic process","synonyms":[{"name":"poly(ribitol phosphate) teichoic acid anabolism","type":"exact"},{"name":"poly(ribitol phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(ribitol phosphate) teichoic acid formation","type":"exact"},{"name":"poly(ribitol phosphate) teichoic acid synthesis","type":"exact"}],"termid":"GO:1902012"}


id: RO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of","termid":"RO:0002215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables","termid":"RO:0002327"}


id: GO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of events leading from the formation of activated factor X to the formation of active thrombin, the cleavage of fibrinogen by thrombin, and the formation of cleaved fibrin into a stable multimeric, cross-linked complex.","definition_xrefs":["GOC:add","PMID:1931959","GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"blood coagulation, common pathway","termid":"GO:0072377"}


id: MONDO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to shellfish or shellfish products.","definition_xrefs":["MESH:D000067208"],"gene_count":0,"genotype_count":0,"name":"obsolete shellfish allergy (obsolete MONDO:0000770)","secondary_identifiers":["DOID:0060495","NCIT:C172320","SCTID:300913006"],"termid":"MONDO:0000770","xrefs":{"Monarch":{"xref_id":"0000770"}}}


id: GO:0052934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome c] + a primary alcohol = 2 [Fe(II)cytochrome c] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c) activity","secondary_identifiers":["GO:0052935","KEGG_REACTION:R05285","MetaCyc:RXN-11333","GO:0018468","GO:0052936","KEGG_REACTION:R05198","EC:1.1.2.8"],"synonyms":[{"name":"2-chloroethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"PQQ-dependent alcohol dehydrogenase activity","type":"exact"},{"name":"alcohol dehydrogenase (acceptor) activity","type":"broad"},{"name":"alcohol:(acceptor) oxidoreductase activity","type":"related"},{"name":"alcohol:acceptor oxidoreductase activity","type":"related"},{"name":"alcohol:cytochrome c oxidoreductase activity","type":"exact"},{"name":"ethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"quinoprotein alcohol dehydrogenase activity","type":"related"}],"termid":"GO:0052934"}


id: MONDO:0017403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic ventricular dysplasia, right dominant form","secondary_identifiers":["UMLS:C5925015","GARD:17347","MEDGEN:1864032","Orphanet:293910"],"synonyms":[{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy, classic form","type":"exact"},{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy, right dominant form","type":"exact"},{"name":"familial isolated arrhythmogenic ventricular dysplasia, classic form","type":"exact"}],"termid":"MONDO:0017403","xrefs":{"Monarch":{"xref_id":"0017403"}}}


id: GO:0045734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of acetate catabolic process","synonyms":[{"name":"regulation of acetate breakdown","type":"exact"},{"name":"regulation of acetate catabolism","type":"exact"},{"name":"regulation of acetate degradation","type":"exact"}],"termid":"GO:0045734"}


id: GO:1903912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endoplasmic reticulum stress-induced eiF2alpha phosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf","PMID:16835242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"negatively_regulates","term_name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","termid":"GO:0036492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation","synonyms":[{"name":"down regulation of eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"down regulation of eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"down regulation of regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"down-regulation of eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"downregulation of eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of eiF2alpha phosphorylation in response to ER stress","type":"narrow"},{"name":"inhibition of eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"inhibition of regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress-induced eIF2 alpha phosphorylation","type":"exact"},{"name":"negative regulation of eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"negative regulation of eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903912"}


id: PBO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 4","termid":"PBO:0051819"}


id: PBO:0075654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 3","termid":"PBO:0075654"}


id: PBO:0012542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_agent","termid":"PBO:0012542"}


id: FYPO:0006846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased total protein level during vegetative growth","synonyms":[{"name":"decreased total protein accumulation during vegetative growth","type":"related"},{"name":"decreased total protein content during vegetative growth","type":"exact"},{"name":"decreased total protein level during mitotic cell cycle","type":"related"},{"name":"reduced total protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0006846"}


id: GO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}


id: GO:0090153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"}


id: FYPO:0005558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"abnormal microtubule bundle","secondary_identifiers":["FYPO:0005795"],"synonyms":[{"name":"abnormal MT bundle","type":"exact"},{"name":"abnormal microtubule array","type":"related"},{"name":"abnormal microtubule bundle physical object quality","type":"exact"},{"name":"abnormal microtubule bundle structure","type":"narrow"}],"termid":"FYPO:0005558"}


id: MONDO:0958162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B lymphoblastic leukemia/lymphoma that is associated with DUX4 gene rearrangement.","definition_xrefs":["DOID:0081412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with DUX4 rearrangement","secondary_identifiers":["UMLS:C5855478","NCIT:C199232","MEDGEN:1848969"],"termid":"MONDO:0958162","xrefs":{"Monarch":{"xref_id":"0958162"}}}


id: PBO:0076073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 related adaptor beta","termid":"PBO:0076073"}


id: PBO:0056893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic deacetylase associated SANT domain protein","termid":"PBO:0056893"}


id: FYPO:0000002
data:
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id: PBO:0061233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP10 ribonucleoprotein","termid":"PBO:0061233"}


id: MONDO:0957308
data:
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id: GO:0034572
data:
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id: PBO:0088929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc5","termid":"PBO:0088929"}


id: GO:0090583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-sorbitol(out) = protein cysteine + D-sorbitol-1-phosphate(in).","definition_xrefs":["PMID:8875915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0003674","GO:0022857","GO:0016740"],"is_obsolete":false,"name":"protein-phosphocysteine-D-sorbitol-phosphotransferase system transporter activity","termid":"GO:0090583"}


id: GO:0045173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of O-sialoglycoproteins, glycoproteins which contain sialic acid as one of their carbohydrates. They are often found on or in the cell or tissue membranes and participate in a variety of biological activities.","definition_xrefs":["GOC:go_curators","PMID:8824323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"O-sialoglycoprotein catabolic process","synonyms":[{"name":"O-sialoglycoprotein breakdown","type":"exact"},{"name":"O-sialoglycoprotein catabolism","type":"exact"},{"name":"O-sialoglycoprotein degradation","type":"exact"}],"termid":"GO:0045173"}


id: GO:0021526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medial motor column neuron differentiation","termid":"GO:0021526"}


id: GO:1902732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:TermGenie","PMID:23212449","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"positively_regulates","term_name":"chondrocyte proliferation","termid":"GO:0035988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte proliferation","synonyms":[{"name":"activation of cartilage cell proliferation","type":"narrow"},{"name":"activation of chondrocyte cell proliferation","type":"narrow"},{"name":"activation of chondrocyte proliferation","type":"narrow"},{"name":"positive regulation of cartilage cell proliferation","type":"exact"},{"name":"positive regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up regulation of cartilage cell proliferation","type":"exact"},{"name":"up regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up regulation of chondrocyte proliferation","type":"exact"},{"name":"up-regulation of cartilage cell proliferation","type":"exact"},{"name":"up-regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up-regulation of chondrocyte proliferation","type":"exact"},{"name":"upregulation of cartilage cell proliferation","type":"exact"},{"name":"upregulation of chondrocyte cell proliferation","type":"exact"},{"name":"upregulation of chondrocyte proliferation","type":"exact"}],"termid":"GO:1902732"}


id: PBO:0063227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 X-linked","termid":"PBO:0063227"}


id: PATO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal orientation","synonyms":[{"name":"dorsally directed","type":"exact"}],"termid":"PATO:0002495"}


id: MONDO:1011746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial eczema, non-human animal","secondary_identifiers":["OMIA:001276"],"termid":"MONDO:1011746","xrefs":{"Monarch":{"xref_id":"1011746"}}}


id: FYPO:0002200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one or more septa, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable stubby vegetative cell","termid":"FYPO:0002107"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable stubby septated vegetative cell","synonyms":[{"name":"inviable stubby septated cell during vegetative growth","type":"exact"},{"name":"inviable stubby septated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped septated vegetative cell","type":"exact"},{"name":"lethal; stubby septated vegetative cell","type":"exact"},{"name":"stubby septated inviable vegetative cell","type":"exact"}],"termid":"FYPO:0002200"}


id: GO:0047560
data:
  {"annotated_genes":["SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73359],"is_not":false,"summary":null,"term":"GO:0047560"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + sphinganine = 3-dehydrosphinganine + H+ + NADPH.","definition_xrefs":["EC:1.1.1.102","RHEA:22640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-dehydrosphinganine reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-428123","KEGG_REACTION:R02978","MetaCyc:3-DEHYDROSPHINGANINE-REDUCTASE-RXN"],"synonyms":[{"name":"3-ketosphinganine reductase activity","type":"related"},{"name":"3-oxosphinganine reductase activity","type":"related"},{"name":"3-oxosphinganine:NADPH oxidoreductase activity","type":"related"},{"name":"D-3-dehydrosphinganine reductase activity","type":"related"},{"name":"D-3-oxosphinganine reductase activity","type":"related"},{"name":"D-3-oxosphinganine:B-NADPH oxidoreductase activity","type":"related"},{"name":"D-erythro-dihydrosphingosine:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"DSR activity","type":"related"},{"name":"KTS reductase activity","type":"related"}],"termid":"GO:0047560","terms_by_termid":{"GO:0047560":null}}


id: PBO:0046276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMG1 N1-specific pseudouridine methyltransferase","termid":"PBO:0046276"}


id: MONDO:0019505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome is characterized by the association of demyelinating leukodystrophy with progressive cerebellar ataxia, hypogonadotropic hypogonadism and hypodontia.","definition_xrefs":["Orphanet:88637"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leukoencephalopathy-ataxia-hypodontia-hypomyelination syndrome","termid":"MONDO:0011897"}],"gene_count":0,"genotype_count":0,"name":"obsolete hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome (obsolete MONDO:0019505)","synonyms":[{"name":"4H syndrome","type":"exact"}],"termid":"MONDO:0019505","xrefs":{"Monarch":{"xref_id":"0019505"}}}


id: GO:0033266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of choline across a membrane.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline transmembrane transporter activity","termid":"GO:0015220"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type choline transporter activity","synonyms":[{"name":"ABC-type choline transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent choline transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled choline transmembrane transporter activity","type":"related"},{"name":"choline-transporting ATPase activity","type":"related"}],"termid":"GO:0033266"}


id: MONDO:0700160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma arising from the mammary gland of a dog.","definition_xrefs":["NCIT:C147073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary neoplasms, animal","termid":"MONDO:0025483"},{"relation_name":"is_a","term_name":"adenoma, non-human","termid":"MONDO:0700133"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine mammary adenoma","termid":"MONDO:0700160","xrefs":{"Monarch":{"xref_id":"0700160"}}}


id: PBO:0065401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 4","termid":"PBO:0065401"}


id: PBO:0079367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 1","termid":"PBO:0079367"}


id: PBO:0041676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM2 antisense RNA 2","termid":"PBO:0041676"}


id: MONDO:0016969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 19","termid":"MONDO:0016937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 19","secondary_identifiers":["GARD:20889","MEDGEN:162782","Orphanet:262986","icd11.foundation:1595108486","UMLS:C0795871","MESH:C538311"],"synonyms":[{"name":"19q duplication","type":"related"},{"name":"19q trisomy","type":"related"},{"name":"Duplication 19q","type":"related"},{"name":"chromosome 19q duplication","type":"related"},{"name":"partial duplication of chromosome 19q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 19","type":"exact"},{"name":"partial trisomy 19q","type":"related"},{"name":"partial trisomy of chromosome 19q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 19","type":"exact"},{"name":"trisomy 19q","type":"related"}],"termid":"MONDO:0016969","xrefs":{"Monarch":{"xref_id":"0016969"}}}


id: GO:0007201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete G-protein dissociation (obsolete GO:0007201)","synonyms":[{"name":"G-protein dissociation","type":"exact"}],"termid":"GO:0007201"}


id: GO:0075525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF.","definition_xrefs":["PMID:18631147","GOC:jl","GOC:bf","PMID:18824510","VZ:858","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational termination-reinitiation","synonyms":[{"name":"termination reinitiation involved in viral translation","type":"exact"},{"name":"viral translation involving termination re-initiation","type":"exact"},{"name":"viral translation involving termination-reinitiation","type":"exact"},{"name":"viral translation involving translational stop-start","type":"exact"}],"termid":"GO:0075525"}


id: PBO:0041701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CALHM6 antisense RNA 1","termid":"PBO:0041701"}


id: FYPO:0004066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is increased.","definition_xrefs":["PomBase:mah","PMID:19328067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at protein coding gene","synonyms":[{"name":"increased protein localisation to chromatin at protein coding gene","type":"exact"},{"name":"increased protein localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at protein-coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004066"}


id: PBO:0056453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl-tRNA synthetase 1","termid":"PBO:0056453"}


id: GO:1904518
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97310],"is_not":false,"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a cytoplasmic microtubule plus-end.","definition_xrefs":["PMID:15772152","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule plus-end","termid":"GO:1904825"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cytoplasmic microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in cytoplasmic microtubule plus-end","type":"exact"},{"name":"protein localisation to cytoplasmic microtubule plus-end","type":"exact"},{"name":"protein localization in cytoplasmic microtubule plus-end","type":"exact"}],"termid":"GO:1904518","terms_by_termid":{"GO:1904518":null}}


id: PBO:0045677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 1","termid":"PBO:0045677"}


id: GO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: starch + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"gene_count":0,"genotype_count":0,"name":"obsolete starch alpha-glucosidase activity (obsolete GO:0044654)","termid":"GO:0044654"}


id: MONDO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary fructose intolerance syndrome (obsolete MONDO:0004906)","termid":"MONDO:0004906","xrefs":{"Monarch":{"xref_id":"0004906"}}}


id: PBO:0049818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC9 antisense RNA 1","termid":"PBO:0049818"}


id: MOD:00718
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to a methylated tyrosine, such as N-methyl-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated tyrosine","synonyms":[{"name":"MeTyr","type":"exact"}],"termid":"MOD:00718"}


id: GO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dehydrogenation","termid":"GO:0018251"}


id: GO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["ISBN:0879694238","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral pattern formation, imaginal disc","synonyms":[{"name":"dorsal-ventral pattern formation, imaginal disc","type":"exact"},{"name":"dorsoventral pattern formation, imaginal disc","type":"exact"}],"termid":"GO:0007450"}


id: GO:0034526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methylnaphthalene + NADH + O2 + H+ = 2-hydroxymethylnaphthalene + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0788"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylnaphthalene hydroxylase activity (obsolete GO:0034526)","termid":"GO:0034526"}


id: MONDO:0015845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervical aplasia and agenesis","secondary_identifiers":["MEDGEN:1673872","UMLS:C5190813","GARD:20186","Orphanet:180145","icd11.foundation:1670353767"],"termid":"MONDO:0015845","xrefs":{"Monarch":{"xref_id":"0015845"}}}


id: FYPO:0006909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle occurs at a smaller cell size than normal after the cell has been arrested in G1 phase due to nitrogen starvation. The cell remains arrested in G1.","definition_xrefs":["PomBase:mah","PMID:872890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mitotic G1/S phase transition at small cell size","synonyms":[{"name":"G1/S phase transition at small cell size during mitotic cell cycle","type":"exact"},{"name":"mitotic G1/S phase transition at abnormally small cell size","type":"exact"},{"name":"mitotic G1/S phase transition at small cell size during vegetative growth","type":"exact"},{"name":"small cell size at G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006909"}


id: GO:0035243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.","definition_xrefs":["EC:2.1.1.320","PMID:14705965","RESID:AA0067","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0140096","GO:0003674","GO:0016740","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"protein-arginine omega-N symmetric methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6804383","RHEA:48108"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega'-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N symmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N symmetric methyltransferase activity","type":"exact"},{"name":"type II PRMT activity","type":"related"},{"name":"type II protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035243"}


id: PBO:0077972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 24-1","termid":"PBO:0077972"}


id: GO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the overall reaction: methyl-Co(III) methylated-thiol-specific corrinoid protein + coenzyme M = Co(I) methylated--thiol-specific corrinoid protein + methyl-CoM.","definition_xrefs":["MetaCyc:RXN-8125","PMID:9371433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"methylthiol:coenzyme M methyltransferase activity","secondary_identifiers":["EC:2.1.1.251","RHEA:32667"],"synonyms":[{"name":"methylthiol:coenzyme M methyl transferase activity","type":"exact"}],"termid":"GO:0044683"}


id: GO:0060629
data:
  {"annotated_genes":["SJAG_04457","SJAG_02104","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110496,94225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090006"},{"annotations":[102709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of homologous chromosome segregation, the cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_03048":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060629","terms_by_termid":{"GO:0062123":null,"GO:0090006":null}}


id: MONDO:0033558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation, immune dysregulation, and eosinophilia","secondary_identifiers":["MEDGEN:1750270","UMLS:C5436572","OMIM:618999"],"synonyms":[{"name":"AIIDE","type":"related"},{"name":"AUTOINFLAMMATION, IMMUNE DYSREGULATION, AND EOSINOPHILIA","type":"related"},{"name":"Atopic Dermatitis, Enteritis, Colitis, and Eosinophilia","type":"related"}],"termid":"MONDO:0033558","xrefs":{"Monarch":{"xref_id":"0033558"}}}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: MONDO:0011056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"Wilms tumor 4","secondary_identifiers":["GARD:15328","OMIM:601363","UMLS:C1832426","MESH:C563336","MEDGEN:318623"],"synonyms":[{"name":"WT4","type":"related"},{"name":"Wilms tumor 4","type":"exact"},{"name":"Wilms tumor type 4","type":"exact"},{"name":"Wilms tumor, type 4","type":"exact"},{"name":"Wilms tumour type 4","type":"exact"},{"name":"familial Wilms tumor 1","type":"related"},{"name":"familial Wilms tumour 1","type":"related"}],"termid":"MONDO:0011056","xrefs":{"Monarch":{"xref_id":"0011056"}}}


id: GO:0033177
data:
  {"annotated_genes":["SJAG_03962","SJAG_MIT09","SJAG_00516","SJAG_03406","SJAG_02782","SJAG_02023","SJAG_01913","SJAG_05294"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119372],"is_not":false,"summary":null,"term":"GO:0033177"},{"annotations":[104226,96164,62012,92389,90498,95982,100267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins.","definition_xrefs":["PMID:10838056","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_05294":null,"SJAG_MIT09":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, proton-transporting domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0033177","terms_by_termid":{"GO:0000220":null,"GO:0033177":null}}


id: GO:0021673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 7. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 7 morphogenesis","termid":"GO:0021671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 formation","termid":"GO:0021673"}


id: PR:O94345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.13","synonyms":[{"name":"Spom972h-mrpl8","type":"exact"}],"termid":"PR:O94345"}


id: PBO:0028511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028511"}


id: PBO:0054732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2141","termid":"PBO:0054732"}


id: PBO:0031737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mating_type_switching","termid":"PBO:0031737"}


id: PBO:0049201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 2","termid":"PBO:0049201"}


id: PBO:0031063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube","termid":"PBO:0031063"}


id: PATO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000449 increased percentage (obsolete PATO:0000449)","termid":"PATO:0000449"}


id: SO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a AA dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000928 insert_AA (obsolete SO:0000928)","synonyms":[{"name":"insert AA","type":"exact"}],"termid":"SO:0000928"}


id: MONDO:0007097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"},{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005244","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"Finnish type amyloidosis","secondary_identifiers":["GARD:2339","Orphanet:85448","DOID:0050637","NANDO:1201063","UMLS:C1622345","ICD9:277.39","MEDGEN:301243","OMIM:105120","SCTID:419398009","MESH:C537459"],"synonyms":[{"name":"AGel amyloidosis","type":"related"},{"name":"amyloid cranial neuropathy with lattice corneal dystrophy","type":"related"},{"name":"amyloidosis 5","type":"related"},{"name":"amyloidosis V","type":"related"},{"name":"amyloidosis due to mutant gelsolin","type":"related"},{"name":"amyloidosis, Finnish type","type":"related"},{"name":"amyloidosis, MERETOJA type","type":"exact"},{"name":"amyloidosis, Meretoja type","type":"related"},{"name":"cerebral amyloid angiopathy, Gsn-related","type":"related"},{"name":"corneal dystrophy, lattice type 2","type":"related"},{"name":"familial amyloid polyneuropathy type IV","type":"exact"},{"name":"familial amyloidosis, Finnish type","type":"exact"},{"name":"gelsolin amyloidosis","type":"exact"},{"name":"hereditary amyloidosis, Finnish type","type":"exact"},{"name":"hereditary gelsolin amyloidosis","type":"related"},{"name":"lattice corneal dystrophy type II Finnish","type":"related"},{"name":"lattice corneal dystrophy, type 2","type":"related"},{"name":"meretoja syndrome","type":"exact"},{"name":"meretoja type amyloidosis","type":"related"}],"termid":"MONDO:0007097","xrefs":{"Monarch":{"xref_id":"0007097"}}}


id: GO:0008575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP for channel gating and polypeptide unfolding before proteolysis in the proteasome. Six ATPase subunits are present in the regulatory particle (RP) of 26S proteasome.","definition_xrefs":["EC:3.6.4.8"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome ATPase activity (obsolete GO:0008575)","synonyms":[{"name":"proteasome ATPase activity","type":"exact"}],"termid":"GO:0008575"}


id: PBO:0040932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 3","termid":"PBO:0040932"}


id: GO:0031913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stable structure that regulates the flow of liquid between the contractile vacuole and the surrounding medium.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"contractile vacuolar membrane","termid":"GO:0031164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0005773","GO:0032991","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"contractile vacuole pore","termid":"GO:0031913"}


id: MONDO:0020745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"ventricular arrhythmias due to cardiac ryanodine receptor calcium release deficiency syndrome","secondary_identifiers":["OMIM:115000","UMLS:C5542154","MEDGEN:1781114"],"synonyms":[{"name":"VACRDS","type":"exact"},{"name":"autosomal dominant cardiac arrhythmia (Kuhn)","type":"exact"},{"name":"cardiac arrhythmia","type":"related"},{"name":"extrasystoles","type":"related"},{"name":"ventricular arrhythmias due to cardiac ryanodine receptor calcium release deficiency syndrome","type":"exact"}],"termid":"MONDO:0020745","xrefs":{"Monarch":{"xref_id":"0020745"}}}


id: GO:0071168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chromatin","synonyms":[{"name":"protein localisation to chromatin","type":"exact"}],"termid":"GO:0071168"}


id: PBO:0113315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of diacylglycerol lipids levels; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0113315"}


id: PBO:0113016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bacterially-derived sulfatase; required for use of alkyl sulfates as sulfur source","termid":"PBO:0113016"}


id: PBO:0091129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Sap18","termid":"PBO:0091129"}


id: FYPO:0006442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the proteolytic processing of sterol regulatory element binding protein (SREBP) into its transcriptionally active form is activated continuously. Normally, SREBP is cleaved only in response to altered levels of one or more lipids.","definition_xrefs":["GO:0035103","PMID:18503029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"constitutively activated sterol regulatory element binding protein cleavage","synonyms":[{"name":"constitutively activated SREBP cleavage","type":"exact"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during mitotic cell cycle","type":"related"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during vegetative growth","type":"exact"}],"termid":"FYPO:0006442"}


id: GO:0055091
data:
  {"annotated_genes":["SJAG_04317","SJAG_02064"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93384,103833],"is_not":false,"summary":null,"term":"GO:0055091"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of phospholipid within an organism or cell.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02064":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phospholipid homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055091","terms_by_termid":{"GO:0055091":null}}


id: PATO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratification","termid":"PATO:0002067"}


id: SO:1001264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoded_mRNA where translation was suspended at a particular codon and resumed at a particular non-overlapping downstream codon.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded_by_translational_bypass","termid":"SO:0000886"},{"relation_name":"is_a","term_name":"recoded_mRNA","termid":"SO:1001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_recoded_by_translational_bypass","synonyms":[{"name":"mRNA recoded by translational bypass","type":"exact"}],"termid":"SO:1001264"}


id: GO:2000532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal albumin absorption","termid":"GO:2000532"}


id: PBO:0058263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4641","termid":"PBO:0058263"}


id: PBO:0068226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 533","termid":"PBO:0068226"}


id: GO:0015421
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75986],"is_not":false,"summary":null,"term":"GO:0015421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + oligopeptide(out) = ADP + phosphate + oligopeptide(in).","definition_xrefs":["RHEA:14429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type oligopeptide transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.6.3.23-RXN","Reactome:R-HSA-5223317","EC:7.4.2.6"],"synonyms":[{"name":"ABC-type oligopeptide transporter","type":"exact"},{"name":"ATP-dependent oligopeptide transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled oligopeptide transmembrane transporter activity","type":"related"},{"name":"oligopeptide ABC transporter","type":"narrow"},{"name":"oligopeptide permease activity","type":"related"},{"name":"oligopeptide-transporting ATPase activity","type":"related"}],"termid":"GO:0015421","terms_by_termid":{"GO:0015421":null}}


id: MONDO:0008615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tune deafness","secondary_identifiers":["MEDGEN:349862","SCTID:55647004","MESH:C566019","UMLS:C1860646","ICD9:389.8","OMIM:191200"],"synonyms":[{"name":"Dysmelodia","type":"related"},{"name":"amusia, congenital","type":"related"},{"name":"tone deafness","type":"related"},{"name":"tune deafness","type":"exact"}],"termid":"MONDO:0008615","xrefs":{"Monarch":{"xref_id":"0008615"}}}


id: PBO:0068501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 88, pseudogene","termid":"PBO:0068501"}


id: GO:0015796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of galactitol across a membrane. Galactitol is the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"galactitol transmembrane transport","synonyms":[{"name":"galactitol transport","type":"broad"}],"termid":"GO:0015796"}


id: MONDO:0800153
data:
  {"annotated_genes":["SJAG_00392","SJAG_01461","SJAG_00636","SJAG_03398","SJAG_03266","SJAG_00635","SJAG_04577","SJAG_00695","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008815"},{"annotations":[85413,85414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009376"},{"annotations":[87413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008988"},{"annotations":[85409,85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009377"},{"annotations":[86063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008814"},{"annotations":[87175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[87384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010703"}]},"cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the urea cycle or an inherited hyperammonemia (any specific disease which causes an inherited increased concentration of ammonia in the blood).","direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder","termid":"MONDO:0004739"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01461":null,"SJAG_03266":null,"SJAG_03398":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"urea cycle disorder or inherited hyperammonemia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800153","terms_by_termid":{"MONDO:0008814":null,"MONDO:0008815":null,"MONDO:0008988":null,"MONDO:0009376":null,"MONDO:0009377":null,"MONDO:0010703":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0800153"}}}


id: PBO:0083515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF KIP3/YGL216W","termid":"PBO:0083515"}


id: PBO:0045844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 34","termid":"PBO:0045844"}


id: PBO:0031380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell","termid":"PBO:0031380"}


id: PBO:0054657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2063","termid":"PBO:0054657"}


id: PBO:0056651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 18","termid":"PBO:0056651"}


id: PR:Q9HE16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe1 gene.","definition_xrefs":["UniProtKB:Q9HE16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1399.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.05c","synonyms":[{"name":"Spom972h-toe1","type":"exact"}],"termid":"PR:Q9HE16"}


id: MONDO:1012352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria pigmentosa, non-human animal","termid":"MONDO:1011748"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urticaria pigmentosa, domestic cat","secondary_identifiers":["OMIA:001289-9685"],"termid":"MONDO:1012352","xrefs":{"Monarch":{"xref_id":"1012352"}}}


id: GO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment that is found at the base of the rhabdomere and contains stored calcium, InsP3 receptors and smooth endoplasmic reticulum Ca2+-ATPase.","definition_xrefs":["PMID:8646774","PMID:11707492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"is_a","term_name":"smooth endoplasmic reticulum cisterna","termid":"GO:0120082"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"subrhabdomeral cisterna","synonyms":[{"name":"SMC","type":"related"},{"name":"submicrovillar cisterna","type":"exact"}],"termid":"GO:0016029"}


id: MONDO:0004701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign protruding lesion arising either from the endometrial cavity (endometrial polyp) or the endocervix (endocervical polyp). It may occasionally recur following complete resection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine polyp","secondary_identifiers":["ICD10CM:N84.0","ICD9:621.0","MEDGEN:57628","SCTID:11314008","UMLS:C0156369","EFO:0009484","NCIT:C3662","DOID:9042"],"synonyms":[{"name":"endometrial/uterine polyp","type":"exact"},{"name":"polyp of corpus uteri","type":"exact"},{"name":"polyp of endometrium","type":"narrow"},{"name":"polyp of the uterus","type":"exact"},{"name":"polyp of uterus","type":"exact"},{"name":"polyp, uterus","type":"exact"},{"name":"uterine polyp","type":"exact"},{"name":"uterus polyp","type":"exact"}],"termid":"MONDO:0004701","xrefs":{"Monarch":{"xref_id":"0004701"}}}


id: PBO:0064854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 5","termid":"PBO:0064854"}


id: GO:0032497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a lipopolysaccharide stimulus is received by a cell and converted into a molecular signal. Lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["PMID:15998797","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of lipopolysaccharide","synonyms":[{"name":"detection of LPS","type":"exact"}],"termid":"GO:0032497"}


id: MONDO:0014964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum (obsolete MONDO:0014964)","termid":"MONDO:0014964","xrefs":{"Monarch":{"xref_id":"0014964"}}}


id: MONDO:0023670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 20","secondary_identifiers":["OMIM:619471","MEDGEN:934674","UMLS:C4310707","DOID:0081009"],"synonyms":[{"name":"BBS20","type":"exact"}],"termid":"MONDO:0023670","xrefs":{"Monarch":{"xref_id":"0023670"}}}


id: PBO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripeptidyl-peptidase II Tpp2","termid":"PBO:0002929"}


id: PBO:0088332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin family protein, implicated in sulfur cluster assembly","termid":"PBO:0088332"}


id: PBO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit A/ SAGA complex subunit","termid":"PBO:0002172"}


id: GO:0022880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylglucosamine(out) = protein histidine + N-acetylglucosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylglucosamine transmembrane transporter activity","termid":"GO:0015572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylglucosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylglucosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022880"}


id: FYPO:0001565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular threonine level","synonyms":[{"name":"increased cellular L-threonine level","type":"exact"},{"name":"increased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"increased cellular threonine level during vegetative growth","type":"exact"},{"name":"increased threonine accumulation","type":"related"}],"termid":"FYPO:0001565"}


id: PBO:0084390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity zinc transporter of the plasma membrane; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084390"}


id: GO:0052592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.17.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0052592"}


id: GO:0072540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 17 cell, a CD4-positive, alpha-beta T cell with the phenotype RORgamma-t-positive that produces IL-17.","definition_xrefs":["GOC:BHF","GOC:ebc","CL:0000899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell lineage commitment","synonyms":[{"name":"T-helper 17 cell fate commitment","type":"exact"},{"name":"Th17 cell lineage commitment","type":"exact"},{"name":"Th17 fate commitment","type":"exact"}],"termid":"GO:0072540"}


id: GO:0141060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of an anatomical structure of another organism, leading to damage or temporary subversion of that structure.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interspecies interaction between organisms","termid":"GO:0044419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}


id: MONDO:0030702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of atherosclerosis.","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune atherosclerosis","secondary_identifiers":["DOID:0040096"],"termid":"MONDO:0030702","xrefs":{"Monarch":{"xref_id":"0030702"}}}


id: GO:0051152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle cell differentiation.","definition_xrefs":["GOC:ai","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell differentiation","termid":"GO:0051149"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell differentiation","synonyms":[{"name":"activation of smooth muscle cell differentiation","type":"narrow"},{"name":"stimulation of smooth muscle cell differentiation","type":"narrow"},{"name":"up regulation of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0051152"}


id: GO:0006798
data:
  {"annotated_genes":["SJAG_03964","SJAG_00132","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70854,96122,116154],"is_not":false,"summary":null,"term":"GO:0006798"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polyphosphate, the anion or salt of polyphosphoric acid.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphosphate metabolic process","termid":"GO:0006797"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00132":null,"SJAG_00570":null,"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"polyphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyphosphate breakdown","type":"exact"},{"name":"polyphosphate catabolism","type":"exact"},{"name":"polyphosphate degradation","type":"exact"}],"termid":"GO:0006798","terms_by_termid":{"GO:0006798":null}}


id: PBO:0017550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1","termid":"PBO:0017550"}


id: GO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate.","definition_xrefs":["EC:3.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arylesterase activity","secondary_identifiers":["UM-BBD_reactionID:r0757","MetaCyc:ARYLESTERASE-RXN","RHEA:17309"],"synonyms":[{"name":"A-esterase activity","type":"broad"},{"name":"aromatic esterase","type":"narrow"},{"name":"aryl-ester hydrolase","type":"narrow"},{"name":"paraoxonase activity","type":"broad"}],"termid":"GO:0004064"}


id: PBO:0078126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 9-1","termid":"PBO:0078126"}


id: PBO:0081987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 16","termid":"PBO:0081987"}


id: PBO:0042184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B2","termid":"PBO:0042184"}


id: GO:0035168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the larval lymph gland acquires the specialized features of a mature hemocyte. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf","PMID:14602069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"},{"relation_name":"part_of","term_name":"larval lymph gland hemopoiesis","termid":"GO:0035167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval lymph gland hemocyte differentiation","synonyms":[{"name":"larval lymph gland arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0035168"}


id: GO:0047212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-2-coumarate + UDP-D-glucose = trans-beta-D-glucosyl-2-hydroxycinnamate + H+ + UDP.","definition_xrefs":["RHEA:10236","EC:2.4.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2-coumarate O-beta-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03710","MetaCyc:2.4.1.114-RXN"],"synonyms":[{"name":"UDP-glucose:trans-2-hydroxycinnamate O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:o-coumaric acid O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-2-hydroxycinnamate O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-o-coumarate glucosyltransferase activity","type":"related"}],"termid":"GO:0047212"}


id: SO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_intron_variant","synonyms":[{"name":"3 prime UTR intron variant","type":"exact"}],"termid":"SO:0002090"}


id: PBO:0049337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2H2 family member C, copy 2","termid":"PBO:0049337"}


id: GO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrol + X-SO3(-) = HX + phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrol sulfotransferase activity (obsolete GO:0019111)","synonyms":[{"name":"phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0019111"}


id: MONDO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous mutation in the CEP120 gene on chromosome 5q23.","definition_xrefs":["DOID:0110093","PMID:25361962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 13 with or without polydactyly","secondary_identifiers":["GARD:16079","OMIM:616300","UMLS:C4225378","MEDGEN:898712"],"synonyms":[{"name":"SRTD13","type":"exact"},{"name":"short-rib thoracic dysplasia 13 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014577","xrefs":{"Monarch":{"xref_id":"0014577"}}}


id: PR:O14111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.15","synonyms":[{"name":"Spom972h-psd3","type":"exact"}],"termid":"PR:O14111"}


id: PBO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 2","termid":"PBO:0042964"}


id: MONDO:0016239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystinosis is a metabolic disease characterized by an accumulation of cystine inside the lysosomes, causing damage in different organs and tissues, particularly in the kidneys and eyes. Three clinical forms have been described: nephropathic infantile, nephropathic juvenile and ocular.","definition_xrefs":["Orphanet:213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysosomal amino acid transport","termid":"MONDO:0019246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"cystinosis","secondary_identifiers":["MESH:D003554","MEDGEN:1384792","ICD10CM:E72.04","DOID:1064","NCIT:C2976","NORD:1028","icd11.foundation:733715856","UMLS:C4316899","NANDO:1200161","GARD:6236","MedDRA:10011777","NANDO:2200571","SCTID:190681003"],"synonyms":[{"name":"Cystinoses","type":"related"},{"name":"Protein defect of cystin transport","type":"exact"},{"name":"cystine diathesis","type":"related"},{"name":"cystine disease","type":"related"},{"name":"cystine storage disease","type":"exact"},{"name":"cystinosis","type":"exact"}],"termid":"MONDO:0016239","xrefs":{"Monarch":{"xref_id":"0016239"}}}


id: PBO:0034246
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-quality_of","termid":"PBO:0034246"}


id: PBO:0084270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; may interact with ribosomes, based on co-purification experiments; may have a role in intracellular sterol transport","termid":"PBO:0084270"}


id: MONDO:0002879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary malignant neoplasm of the uterine corpus characterized by the presence of an epithelial and a mesenchymal component. This category includes carcinosarcoma, carcinofibroma, and adenosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"uterine corpus mixed epithelial and mesenchymal neoplasm","termid":"MONDO:0016255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine body mixed cancer","secondary_identifiers":["DOID:4114","NCIT:C6311","UMLS:C1334628","MEDGEN:233163"],"synonyms":[{"name":"malignant body of uterus mixed neoplasm","type":"exact"},{"name":"malignant body of uterus mixed tumor","type":"exact"},{"name":"malignant body of uterus mixed tumour","type":"exact"},{"name":"malignant corpus uteri mixed neoplasm","type":"exact"},{"name":"malignant corpus uteri mixed tumor","type":"exact"},{"name":"malignant corpus uteri mixed tumour","type":"exact"},{"name":"malignant mixed neoplasm of body of uterus","type":"exact"},{"name":"malignant mixed neoplasm of corpus uteri","type":"exact"},{"name":"malignant mixed neoplasm of the body of uterus","type":"exact"},{"name":"malignant mixed neoplasm of the corpus uteri","type":"exact"},{"name":"malignant mixed neoplasm of the uterine body","type":"exact"},{"name":"malignant mixed neoplasm of the uterine corpus","type":"exact"},{"name":"malignant mixed neoplasm of uterine body","type":"exact"},{"name":"malignant mixed neoplasm of uterine corpus","type":"exact"},{"name":"malignant mixed tumor of body of uterus","type":"exact"},{"name":"malignant mixed tumor of corpus uteri","type":"exact"},{"name":"malignant mixed tumor of the body of uterus","type":"exact"},{"name":"malignant mixed tumor of the corpus uteri","type":"exact"},{"name":"malignant mixed tumor of the uterine body","type":"exact"},{"name":"malignant mixed tumor of the uterine corpus","type":"exact"},{"name":"malignant mixed tumor of uterine body","type":"exact"},{"name":"malignant mixed tumor of uterine corpus","type":"exact"},{"name":"malignant mixed tumour of body of uterus","type":"exact"},{"name":"malignant mixed tumour of corpus uteri","type":"exact"},{"name":"malignant mixed tumour of the body of uterus","type":"exact"},{"name":"malignant mixed tumour of the corpus uteri","type":"exact"},{"name":"malignant mixed tumour of the uterine body","type":"exact"},{"name":"malignant mixed tumour of the uterine corpus","type":"exact"},{"name":"malignant mixed tumour of uterine body","type":"exact"},{"name":"malignant mixed tumour of uterine corpus","type":"exact"},{"name":"malignant uterine body mixed neoplasm","type":"exact"},{"name":"malignant uterine body mixed tumor","type":"exact"},{"name":"malignant uterine body mixed tumour","type":"exact"},{"name":"malignant uterine corpus mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"malignant uterine corpus mixed tumor","type":"exact"},{"name":"malignant uterine corpus mixed tumour","type":"exact"}],"termid":"MONDO:0002879","xrefs":{"Monarch":{"xref_id":"0002879"}}}


id: SO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of known length which may be used to manufacture a longer region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly_component","synonyms":[{"name":"assembly component","type":"exact"}],"termid":"SO:0000143"}


id: MONDO:0022736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"occupational disorder","termid":"MONDO:0100366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupational lung disease","secondary_identifiers":["SCTID:86157004","ICD9:508.9","MEDGEN:538557","UMLS:C0264421"],"synonyms":[{"name":"Occupational inhalation disease","type":"related"},{"name":"Occupational lung disease","type":"related"},{"name":"Occupational lung disorder","type":"related"},{"name":"Occupational pulmonary disease","type":"related"},{"name":"Occupational respiratory disease","type":"related"}],"termid":"MONDO:0022736","xrefs":{"Monarch":{"xref_id":"0022736"}}}


id: PBO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 4","termid":"PBO:0046346"}


id: PBO:0090313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA biosynthesis protein Cmr2","termid":"PBO:0090313"}


id: SO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_2prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:092"],"synonyms":[{"name":"3,2'-O-dimethyluridine","type":"exact"},{"name":"m3Um","type":"exact"},{"name":"three two prime O dimethyluridine","type":"exact"}],"termid":"SO:0001375"}


id: GO:0097467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a non-glutamatergic neuron, containing the specialized apparatus necessary to release neurotransmitters at a regulatory synapse. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it. Type III terminal boutons are larger than type II ones.","definition_xrefs":["PMID:10218156","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type III terminal bouton","synonyms":[{"name":"type III terminal button","type":"exact"}],"termid":"GO:0097467"}


id: FYPO:0001168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ATPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal ATPase activity","termid":"FYPO:0001167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased ATPase activity","synonyms":[{"name":"reduced ATPase activity","type":"exact"}],"termid":"FYPO:0001168"}


id: GO:0044667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (R)-carnitine(out) + 4-(trimethylammonio)butanoate(in) = (R)-carnitine(in) + 4-(trimethylammonio)butanoate(out).","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"(R)-carnitine transmembrane transporter activity","termid":"GO:1901235"},{"relation_name":"is_a","term_name":"4-(trimethylammonio)butanoate transmembrane transporter activity","termid":"GO:1901236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"(R)-carnitine:4-(trimethylammonio)butanoate antiporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-100","RHEA:29427"],"synonyms":[{"name":"(R)-carnitine:gamma-butyrobetaine antiporter activity","type":"exact"},{"name":"L-carnitine:4-(trimethylammonio)butanoate antiporter activity","type":"exact"},{"name":"L-carnitine:gamma-butyrobetaine antiporter activity","type":"exact"}],"termid":"GO:0044667"}


id: PBO:0068144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 451","termid":"PBO:0068144"}


id: FYPO:0002330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K4me during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002330"}


id: PR:P78875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.15c","synonyms":[{"name":"SPAC19G12.15c","type":"related"},{"name":"Spom972h-tpp1","type":"exact"},{"name":"TPP tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78875"}


id: PBO:0034472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_spindle_elongation","termid":"PBO:0034472"}


id: GO:0071261
data:
  {"annotated_genes":["SJAG_00959","SJAG_00064"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98375,108624],"is_not":false,"summary":null,"term":"GO:0071261"}]},"cv_name":"cellular_component","definition":"A translocon complex that contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins (translocon-associated proteins or TRAPs); in budding yeast the core proteins are Ssh1p, Sbh2p, and Sss1p. The Ssh1 translocon complex is involved in the cotranslational pathway of protein transport across the ER membrane, and recognizes proteins bearing strongly hydrophobic signal sequences.","definition_xrefs":["PMID:12134063","PMID:8612571","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocon complex","termid":"GO:0071256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005789","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"Ssh1 translocon complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ssh1p-Sss1p-Sbh2p complex","type":"narrow"}],"termid":"GO:0071261","terms_by_termid":{"GO:0071261":null}}


id: MONDO:0007080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism type I (FH-I) is a rare heritable, glucocorticoid remediable form of primary aldosteronism (PA) characterized by early-onset hypertension, hyperaldosteronism, variable hypokalemia, low plasma renin activity (PRA), and abnormal production of 18-oxocortisol and 18-hydroxycortisol.","definition_xrefs":["Orphanet:403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid-remediable aldosteronism","secondary_identifiers":["OMIM:103900","ICD10CM:E26.02","MESH:C563177","DOID:14080","MEDGEN:824577","ICD9:255.11","GARD:2790","UMLS:C3838731"],"synonyms":[{"name":"ACTH-dependent hyperaldosteronism syndrome","type":"related"},{"name":"FH 1","type":"related"},{"name":"FH-I","type":"exact"},{"name":"FH1","type":"exact"},{"name":"GRA","type":"exact"},{"name":"HALD1","type":"related"},{"name":"aldosteronism, glucocorticoid-remediable","type":"exact"},{"name":"aldosteronism, sensitive to dexamethasone","type":"related"},{"name":"dexamethasone sensitive hypertension","type":"related"},{"name":"dexamethasone-sensitive hypertension","type":"exact"},{"name":"familial hyperaldosteronism type 1","type":"exact"},{"name":"familial hyperaldosteronism type I","type":"related"},{"name":"glucocorticoid sensitive hypertension","type":"related"},{"name":"glucocorticoid-remediable aldosteronism","type":"exact"},{"name":"glucocorticoid-sensitive hypertension","type":"exact"},{"name":"glucocorticoid-suppressible hyperaldosteronism","type":"related"},{"name":"hyperaldosteronism, familial type 1","type":"related"},{"name":"hyperaldosteronism, familial, type 1","type":"related"},{"name":"hyperaldosteronism, familial, type I","type":"related"}],"termid":"MONDO:0007080","xrefs":{"Monarch":{"xref_id":"0007080"}}}


id: BFO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a core relation that holds between a whole and its part","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part","termid":"BFO:0000051"}


id: GO:0043403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of skeletal muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.","definition_xrefs":["PMID:16607119","PMID:12021255","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue regeneration","synonyms":[{"name":"myofiber turnover","type":"related"}],"termid":"GO:0043403"}


id: PBO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein (predicted)","termid":"PBO:0005643"}


id: GO:0150056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 1. Amylin receptor complex 1 (AMY1) also serves as a receptor for the calcitonin related peptide (CGRP) and adrenomedullin (AM/ADM).","definition_xrefs":["GOC:aruk","PMID:22500019","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"amylin receptor complex 1","synonyms":[{"name":"AMY1 complex","type":"exact"}],"termid":"GO:0150056"}


id: GO:0016095
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61700],"is_not":false,"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["GOC:go_curators","Wikipedia:Polyprenol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyprenol catabolic process","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"polyprenol breakdown","type":"exact"},{"name":"polyprenol catabolism","type":"exact"},{"name":"polyprenol degradation","type":"exact"}],"termid":"GO:0016095","terms_by_termid":{"GO:0016095":null}}


id: PBO:0063913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3CA divergent transcript","termid":"PBO:0063913"}


id: GO:0097323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a B cell to another cell via adhesion molecules.","definition_xrefs":["GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"B cell adhesion","termid":"GO:0097323"}


id: MONDO:0020484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare familial disorder with hypertrophic cardiomyopathy (obsolete MONDO:0020484)","secondary_identifiers":["Orphanet:99739"],"synonyms":[{"name":"rare familial disorder with hypertrophic obstructive cardiomyopathy","type":"exact"},{"name":"rare familial disorder with hypertrophic subaortic stenosis","type":"exact"}],"termid":"MONDO:0020484","xrefs":{"Monarch":{"xref_id":"0020484"}}}


id: GO:0052146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis on or near host (obsolete GO:0052146)","termid":"GO:0052146"}


id: PBO:0042126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 200","termid":"PBO:0042126"}


id: GO:1904399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparan sulfate.","definition_xrefs":["GOC:TermGenie","PMID:8567685","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heparan sulfate binding","termid":"GO:1904399"}


id: MONDO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The formation of a blood clot (thrombus) in the portal vein.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"portal vein thrombosis","secondary_identifiers":["icd11.foundation:866276949","DOID:11695","MEDGEN:56372","SCTID:17920008","ICD9:452","UMLS:C0155773","ICD10CM:I81","NCIT:C78565"],"synonyms":[{"name":"portal vein thrombotic disease","type":"exact"},{"name":"thrombotic disease of portal vein","type":"exact"}],"termid":"MONDO:0001339","xrefs":{"Monarch":{"xref_id":"0001339"}}}


id: GO:0031904
data:
  {"annotated_genes":["SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031906"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"endosome lumen","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1547508851"],"termid":"GO:0031904","terms_by_termid":{"GO:0031906":null}}


id: GO:0009135
data:
  {"annotated_genes":["SJAG_04849","SJAG_03373","SJAG_00027","SJAG_02135","SJAG_05314","SJAG_02785","SJAG_02009","SJAG_04048","SJAG_03660","SJAG_00685","SJAG_04192","SJAG_03903","SJAG_06621","SJAG_02945","SJAG_04495","SJAG_04334","SJAG_02038","SJAG_01310","SJAG_00839","SJAG_02796","SJAG_00605","SJAG_03828","SJAG_00461","SJAG_02107","SJAG_06622","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[105779,95349,98592,103957,109704,109702,109701,105780,109707,78212,98321,103701,106149,106150,105781,109703,109705,116652,109706,94860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[64497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[76379,73410],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70422],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleoside diphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009135","terms_by_termid":{"GO:0006110":null,"GO:0006172":null,"GO:0045820":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null}}


id: GO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte activation involved in immune response","synonyms":[{"name":"lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002285"}


id: GO:0016170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-15 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-15 receptor binding","synonyms":[{"name":"IL-15","type":"narrow"},{"name":"interleukin-15 receptor ligand","type":"narrow"}],"termid":"GO:0016170"}


id: MONDO:0013341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methylmalonic aciduria due to transcobalamin receptor defect is a rare metabolite absorption and transport disorder characterized by a moderate increase of methylmalonic acid (MMA) in the blood and urine due to decreased cellular uptake of cobalamin resulting from decreased transcobalamin receptor function. Patients are usually asymptomatic however, screening reveals increased C3-acylcarnitine and MMA in plasma. Serum homocysteine levels may vary from normal to moderately elevated and retinal vascular occlusive disease, resulting in severe visual loss, has been reported.","definition_xrefs":["Orphanet:280183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"methylmalonic acidemia due to transcobalamin receptor defect","secondary_identifiers":["DOID:0060741","GARD:16481","UMLS:C4749905","OMIM:613646","MEDGEN:1670056"],"synonyms":[{"name":"CD320 methylmalonic acidemia","type":"exact"},{"name":"methylmalonic acidemia caused by mutation in CD320","type":"exact"},{"name":"methylmalonic acidemia, TCb1R type","type":"exact"},{"name":"methylmalonic acidemia, TCbIR type","type":"exact"},{"name":"methylmalonic acidemia, Tcblr type","type":"related"},{"name":"methylmalonic aciduria due to transcobalamin receptor defect","type":"exact"},{"name":"methylmalonic aciduria, transient, due to transcobalamin receptor defect","type":"related"}],"termid":"MONDO:0013341","xrefs":{"Monarch":{"xref_id":"0013341"}}}


id: GO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + urea = ADP + 2 H+ + phosphate + urea-1-carboxylate.","definition_xrefs":["RHEA:20896","EC:6.3.4.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"urea carboxylase activity","secondary_identifiers":["KEGG_REACTION:R00774","MetaCyc:UREA-CARBOXYLASE-RXN"],"synonyms":[{"name":"ATP--urea amidolyase activity","type":"related"},{"name":"UALase activity","type":"related"},{"name":"UCA activity","type":"related"},{"name":"urea amidolyase activity","type":"related"},{"name":"urea carboxylase (hydrolysing)","type":"related"},{"name":"urea carboxylase (hydrolyzing) activity","type":"related"},{"name":"urea:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"urease (ATP-hydrolysing)","type":"related"},{"name":"urease (ATP-hydrolyzing) activity","type":"related"}],"termid":"GO:0004847"}


id: GO:0061376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammillotegmental tract progresses over time, from its formation to the mature structure. The mammillotegmental tract is the collection of axons that connects the ventral diencephalon to the tegmentum and pons.","definition_xrefs":["PMID:10662642","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary axonal complex development","termid":"GO:0061373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillotegmental axonal tract development","termid":"GO:0061376"}


id: GO:0019401
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94316,106820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alditol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alditol anabolism","type":"exact"},{"name":"alditol biosynthesis","type":"exact"},{"name":"alditol formation","type":"exact"},{"name":"alditol synthesis","type":"exact"}],"termid":"GO:0019401","terms_by_termid":{"GO:0006114":null}}


id: MONDO:1012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in rabbits due to a mutation in the ANO5 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, ANO5-related, rabbit","secondary_identifiers":["OMIA:002242-9986"],"termid":"MONDO:1012828","xrefs":{"Monarch":{"xref_id":"1012828"}}}


id: GO:0015971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"guanosine tetraphosphate metabolic process","termid":"GO:0015969"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate catabolic process","termid":"GO:0034037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine tetraphosphate catabolic process","synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') catabolic process","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') catabolism","type":"exact"},{"name":"guanosine tetraphosphate breakdown","type":"exact"},{"name":"guanosine tetraphosphate catabolism","type":"exact"},{"name":"guanosine tetraphosphate degradation","type":"exact"}],"termid":"GO:0015971"}


