# terms

id: PBO:0004169
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal region is sufficent for localization","termid":"PBO:0004169"}


id: GO:0050000
data:
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id: PBO:0091275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartyl/glutamyl-tRNA amidotransferase subunit B-related Aim41","termid":"PBO:0091275"}


id: PBO:0078211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-4","termid":"PBO:0078211"}


id: MONDO:1012796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polyneuropathy that occurs in dogs due to a mutation in the NDRG1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"polyneuropathy, dog","termid":"MONDO:1012354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, NDRG1-related, dog","secondary_identifiers":["OMIA:002120-9615"],"termid":"MONDO:1012796","xrefs":{"Monarch":{"xref_id":"1012796"}}}


id: GO:0035062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleoplasmic speckle distributed in the interchromatin space of cells in close proximity to chromatin. Omega speckles are distinct from interchromatin granules and contain heterogeneous nuclear RNA-binding proteins (hnRNPs).","definition_xrefs":["GOC:bf","PMID:10984439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear speck","termid":"GO:0016607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"omega speckle","termid":"GO:0035062"}


id: GO:0000978
data:
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id: GO:0000796
data:
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id: MONDO:0030052
data:
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id: PBO:0043625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP1 E3 ubiquitin ligase","termid":"PBO:0043625"}


id: GO:0006775
data:
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id: FYPO:0000408
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119857,119855,119856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle phase","termid":"FYPO:0002735"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle progression: decreased rate","type":"related"},{"name":"decreased rate of cell cycle progression","type":"related"},{"name":"prolonged cell cycle phase","type":"exact"},{"name":"reduced rate of cell cycle progression","type":"related"}],"termid":"FYPO:0000408","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: MONDO:1011055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in lion.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, lion","secondary_identifiers":["OMIA:000807-9689"],"termid":"MONDO:1011055","xrefs":{"Monarch":{"xref_id":"1011055"}}}


id: MONDO:0021400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"},{"relation_name":"is_a","term_name":"polyp of large intestine","termid":"MONDO:0021392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"polyp of colon","secondary_identifiers":["UMLS:C0009376","MESH:D003111","SCTID:68496003","MEDGEN:3166","ICD10CM:K63.5","NCIT:C2954"],"synonyms":[{"name":"colon polyp","type":"exact"},{"name":"colonic polyp","type":"exact"},{"name":"polyp of the colon","type":"exact"}],"termid":"MONDO:0021400","xrefs":{"Monarch":{"xref_id":"0021400"}}}


id: PBO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD4A antisense RNA 1","termid":"PBO:0048003"}


id: PBO:0056586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCUR1 pseudogene 2","termid":"PBO:0056586"}


id: GO:0044437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a vacuole, a closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar part (obsolete GO:0044437)","synonyms":[{"name":"vacuole component","type":"exact"}],"termid":"GO:0044437"}


id: MONDO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of necrotizing anterior scleritis without pain in which the sclera is notably white, avascular and thin. Both choroidal exposure and staphyloma formation may occur.","direct_ancestors":[{"relation_name":"is_a","term_name":"necrotizing scleritis","termid":"MONDO:0040699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleromalacia perforans","secondary_identifiers":["SCTID:26664005","ICD9:379.04","icd11.foundation:740830358","DOID:14230","UMLS:C0155354","MEDGEN:509929"],"termid":"MONDO:0001914","xrefs":{"Monarch":{"xref_id":"0001914"}}}


id: PBO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase Ura4","termid":"PBO:0005010"}


id: MONDO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple sclerosis that is characterized by steadily worsening symptoms and attacks during periods of remission with disease progression from the onset.","definition_xrefs":["DOID:0050785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic progressive multiple sclerosis","termid":"MONDO:0005284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"progressive relapsing multiple sclerosis","secondary_identifiers":["MEDGEN:95982","UMLS:C0393666","SCTID:230374002"],"synonyms":[{"name":"PRMS","type":"exact"},{"name":"progressive-relapsing MS","type":"exact"}],"termid":"MONDO:0000452","xrefs":{"Monarch":{"xref_id":"0000452"}}}


id: PBO:0056242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog 3, pseudogene","termid":"PBO:0056242"}


id: PBO:0077526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 240","termid":"PBO:0077526"}


id: PBO:0067979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 281","termid":"PBO:0067979"}


id: PBO:0077778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 70","termid":"PBO:0077778"}


id: PBO:0061195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide transhydrogenase","termid":"PBO:0061195"}


id: SO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The polypyrimidine tract is one of the cis-acting sequence elements directing intron removal in pre-mRNA splicing.","direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine_tract","secondary_identifiers":["http://en.wikipedia.org/wiki/Polypyrimidine_tract"],"synonyms":[{"name":"polypyrimidine tract","type":"exact"}],"termid":"SO:0000612"}


id: PBO:0002813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kexin","termid":"PBO:0002813"}


id: PBO:0029581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation_during_cellular_response_to_caffeine","termid":"PBO:0029581"}


id: SO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A segment of non-homology between a and alpha mating alleles, found at all three mating loci (HML, MAT, and HMR), has two forms (Ya and Yalpha).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_region","synonyms":[{"name":"Y-region","type":"exact"}],"termid":"SO:0002001"}


id: FYPO:0006866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is increased. Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:30928696","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0004803","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"increased rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0006866"}


id: PR:Q9P7H5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA-processing protein cox24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.04","synonyms":[{"name":"Spom972h-cox24","type":"exact"}],"termid":"PR:Q9P7H5"}


id: MONDO:0009946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency is a rare, hereditary, hemolytic anemia due to an erythrocyte nucleotide metabolism disorder characterized by mild to moderate hemolytic anemia associated with basophilic stippling and the accumulation of high concentrations of pyrimidine nucleotides within the erythrocyte. Patients present with variable features of jaundice, splenomegaly, hepatomegaly, gallstones, and sometimes require transfusions. Rare cases of mild development delay and learning difficulties are reported.","definition_xrefs":["Orphanet:35120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia due to pyrimidine 5' nucleotidase deficiency","secondary_identifiers":["MEDGEN:341470","MESH:C564859","UMLS:C1849507","GARD:16635","OMIM:266120"],"synonyms":[{"name":"P5N deficiency","type":"exact"},{"name":"UMPH1 deficiency","type":"exact"},{"name":"Umph1 deficiency","type":"related"},{"name":"anemia, hemolytic, due to UMPH1 deficiency","type":"exact"},{"name":"hemolytic Anaemia due to P5N deficiency","type":"related"},{"name":"hemolytic Anaemia due to Umph1 deficiency","type":"related"},{"name":"hemolytic Anemia due to P5N deficiency","type":"related"},{"name":"hemolytic Anemia due to Umph1 deficiency","type":"related"},{"name":"pyrimidine 5-prime Nucleotidase deficiency, hemolytic Anaemia due to","type":"related"},{"name":"pyrimidine 5-prime Nucleotidase deficiency, hemolytic Anemia due to","type":"related"},{"name":"uridine 5'-monophosphate hydrolase deficiency","type":"exact"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anaemia due to","type":"related"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anemia due to","type":"related"}],"termid":"MONDO:0009946","xrefs":{"Monarch":{"xref_id":"0009946"}}}


id: PBO:0066344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 6","termid":"PBO:0066344"}


id: GO:2000032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary shoot formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary shoot formation","synonyms":[{"name":"regulation of auxiliary shoot formation","type":"related"},{"name":"regulation of axillary shoot formation","type":"related"},{"name":"regulation of axillary shoot system formation","type":"exact"},{"name":"regulation of shoot branching","type":"related"}],"termid":"GO:2000032"}


id: PBO:0083534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TSR2/YLR435W","termid":"PBO:0083534"}


id: GO:2001020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of response to DNA damage stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of response to DNA damage stimulus (obsolete GO:2001020)","synonyms":[{"name":"regulation of DNA damage response","type":"exact"},{"name":"regulation of cellular DNA damage response","type":"exact"},{"name":"regulation of cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of response to genotoxic stress","type":"exact"}],"termid":"GO:2001020"}


id: SO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with polypeptide molecules.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_binding_site","synonyms":[{"name":"INSDC_feature:protein_bind","type":"exact"},{"name":"protein binding site","type":"exact"}],"termid":"SO:0000410"}


id: MONDO:0859325
data:
  {"annotated_genes":["SJAG_04853","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85937,85938],"is_not":false,"summary":null,"term":"MONDO:0859325"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 109","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824036","DOID:0070378","OMIM:620145","UMLS:C5774263"],"termid":"MONDO:0859325","terms_by_termid":{"MONDO:0859325":null},"xrefs":{"Monarch":{"xref_id":"0859325"}}}


id: GO:0090217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity (obsolete GO:0090217)","termid":"GO:0090217"}


id: PR:Q9UTP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.05 gene.","definition_xrefs":["UniProtKB:Q9UTP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.05","synonyms":[{"name":"Spom972h-SPAC1093.05","type":"exact"}],"termid":"PR:Q9UTP9"}


id: GO:0006034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving cuticle chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in cuticles.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cuticle chitin metabolic process (obsolete GO:0006034)","synonyms":[{"name":"cuticle chitin metabolism","type":"exact"}],"termid":"GO:0006034"}


id: MONDO:0060496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, neuropathy, and deafness","secondary_identifiers":["UMLS:C4479603","MEDGEN:1382171","OMIM:617519"],"synonyms":[{"name":"NEDHND","type":"related"},{"name":"myopathy, Congenital, with neuropathy and Deafness","type":"related"},{"name":"neurodevelopmental disorder with hypotonia, neuropathy, and deafness","type":"exact"}],"termid":"MONDO:0060496","xrefs":{"Monarch":{"xref_id":"0060496"}}}


id: PBO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of leptomycin B","termid":"PBO:0001741"}


id: MONDO:0004352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma of the brain occurring in adults.","definition_xrefs":["NCIT:C9372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult brain ependymoma","secondary_identifiers":["DOID:7750","UMLS:C1332186","MEDGEN:231033"],"synonyms":[{"name":"adult brain ependymoma","type":"exact"},{"name":"brain ependymoma","type":"broad"}],"termid":"MONDO:0004352","xrefs":{"Monarch":{"xref_id":"0004352"}}}


id: MONDO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long qt syndrome 8","secondary_identifiers":["DOID:0110649","OMIM:618447"],"synonyms":[{"name":"LONG QT SYNDROME 8","type":"related"},{"name":"LQT8","type":"related"}],"termid":"MONDO:0032756","xrefs":{"Monarch":{"xref_id":"0032756"}}}


id: GO:0070106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-27 binding to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:add","GOC:mah","GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-27-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9020956"],"synonyms":[{"name":"IL-27-mediated signaling pathway","type":"exact"},{"name":"IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070106"}


id: PBO:0030718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_polysaccharide_level","termid":"PBO:0030718"}


id: PBO:0061191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 1","termid":"PBO:0061191"}


id: FYPO:0005957
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119721],"is_not":false,"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0006470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation during vegetative growth","termid":"FYPO:0005956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"decreased protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005957","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: FYPO:0000529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which peroxisome degradation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal peroxisome degradation","synonyms":[{"name":"normal pexophagy","type":"exact"},{"name":"pexophagy: normal","type":"related"}],"termid":"FYPO:0000529"}


id: GO:0103016
data:
  {"annotated_genes":["SJAG_00358","SJAG_01302","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94606,106187,108732],"is_not":false,"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H+ + L-cysteinyl-[protein].","definition_xrefs":["RHEA:47032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0140101","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"tRNA-uridine 2-sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-2023","EC:2.8.1.13"],"synonyms":[{"name":"tRNA-specific 2-thiouridylase activity","type":"related"},{"name":"tRNA-uracil-34 sulfurtransferase activity","type":"related"}],"termid":"GO:0103016","terms_by_termid":{"GO:0103016":null}}


id: PR:O60179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp10 gene.","definition_xrefs":["UniProtKB:O60179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.04c","synonyms":[{"name":"Spom972h-utp10","type":"exact"},{"name":"U3 protein 10 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60179"}


id: PBO:0047665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fukutin related protein","termid":"PBO:0047665"}


id: PBO:0030250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trehalose_absent_from_cell_during_heat_shock","termid":"PBO:0030250"}


id: PATO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodorsal orientation","synonyms":[{"name":"anterodorsally directed","type":"exact"}],"termid":"PATO:0002491"}


id: PBO:0067046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 66, pseudogene","termid":"PBO:0067046"}


id: PBO:0035756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_salt_stress","termid":"PBO:0035756"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["EC:4.1.1.5","MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: PBO:0116909
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is usually silenced in S. pombe","termid":"PBO:0116909"}


id: FYPO:0004137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25245948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","termid":"FYPO:0003572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004137"}


id: MONDO:0007099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"familial visceral amyloidosis","secondary_identifiers":["NANDO:2200138","MESH:C538249","ICD9:277.39","GARD:8282","MEDGEN:82799","SCTID:66451004","Orphanet:85450","OMIM:105200","DOID:0050636","UMLS:C0268389"],"synonyms":[{"name":"German type amyloidosis","type":"exact"},{"name":"Ostertag type amyloidosis","type":"exact"},{"name":"amyloidosis 8","type":"related"},{"name":"amyloidosis VIII","type":"related"},{"name":"amyloidosis familial renal","type":"related"},{"name":"amyloidosis familial visceral","type":"related"},{"name":"amyloidosis systemic nonneuropathic","type":"related"},{"name":"amyloidosis, 3 or more types","type":"exact"},{"name":"amyloidosis, Ostertag type","type":"exact"},{"name":"amyloidosis, familial renal","type":"exact"},{"name":"amyloidosis, familial visceral","type":"related"},{"name":"amyloidosis, renal","type":"exact"},{"name":"amyloidosis, systemic Nonneuropathic","type":"related"},{"name":"familial amyloid nephropathy","type":"exact"},{"name":"familial renal amyloidosis","type":"exact"},{"name":"hereditary amyloid nephropathy","type":"exact"},{"name":"hereditary amyloidosis with primary renal involement","type":"related"},{"name":"hereditary renal amyloidosis","type":"exact"},{"name":"systemic nonneuropathic amyloidosis","type":"exact"}],"termid":"MONDO:0007099","xrefs":{"Monarch":{"xref_id":"0007099"}}}


id: PBO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0005808"}


id: PBO:0065829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6C antisense RNA 1","termid":"PBO:0065829"}


id: GO:0102131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxyglutaryl-[acp] methyl ester = NADPH + H+ + a 3-oxo-glutaryl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-glutaryl-[acp] methyl ester reductase activity (obsolete GO:0102131)","termid":"GO:0102131"}


id: GO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + O2 = cholest-5-en-3-one + H2O2.","definition_xrefs":["RHEA:32183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholesterol oxidase activity","secondary_identifiers":["EC:1.1.3.6","KEGG_REACTION:R01459","MetaCyc:CHOLESTEROL-OXIDASE-RXN"],"synonyms":[{"name":"3beta-hydroxy steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid:oxygen oxidoreductase activity","type":"related"},{"name":"cholesterol- O2 oxidoreductase activity","type":"related"},{"name":"cholesterol-O2 oxidoreductase activity","type":"related"},{"name":"cholesterol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016995"}


id: PBO:0058303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4677","termid":"PBO:0058303"}


id: PBO:0048138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 2","termid":"PBO:0048138"}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: PBO:0078084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC2L pseudogene 1","termid":"PBO:0078084"}


id: MONDO:0800080
data:
  {"annotated_genes":["SJAG_00339","SJAG_00373","SJAG_04528","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008701"},{"annotations":[86652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013223"},{"annotations":[87259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010013"},{"annotations":[85508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","definition":"An instance of spondylodysplastic dysplasia that has a high degree of severity.","definition_xrefs":["PMID:31633310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00373":null,"SJAG_01216":null,"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"severe spondylodysplastic dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800080","terms_by_termid":{"MONDO:0008701":null,"MONDO:0009593":null,"MONDO:0010013":null,"MONDO:0013223":null},"xrefs":{"Monarch":{"xref_id":"0800080"}}}


id: MONDO:0021196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease by molecular activity disrupted (obsolete MONDO:0021196)","termid":"MONDO:0021196","xrefs":{"Monarch":{"xref_id":"0021196"}}}


id: PBO:0011995
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Johanson-Blizzard syndrome","termid":"PBO:0011995"}


id: PBO:0002908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein","termid":"PBO:0002908"}


id: PBO:0091443
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Staurosporine-related Protein Kinase","termid":"PBO:0091443"}


id: MONDO:0700207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient state of hypogonadotropic hypogonadism associated with prolongation of childhood phase of growth, delayed skeletal maturation, delayed and attenuated pubertal growth spurt, and relatively low insulin-like growth factor-1 secretion.","definition_xrefs":["PMID:23087852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutional delay of growth and puberty","secondary_identifiers":["MEDGEN:575091","UMLS:C0342538","SCTID:237813007","icd11.foundation:1683573263"],"termid":"MONDO:0700207","xrefs":{"Monarch":{"xref_id":"0700207"}}}


id: PBO:0036099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_heat","termid":"PBO:0036099"}


id: PomGeneEx:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at the same level under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constant","termid":"PomGeneEx:0000007"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level constant","synonyms":[{"name":"constant RNA level","type":"exact"},{"name":"RNA expression constant","type":"exact"}],"termid":"PomGeneEx:0000016"}


id: PBO:0082135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-related protein of the dynactin complex; required for spindle orientation and nuclear migration; forms actin-like short filament composed of 9 or 10 Arp1p monomers; putative ortholog of mammalian centractin","termid":"PBO:0082135"}


id: PBO:0072266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 4","termid":"PBO:0072266"}


id: GO:0005227
data:
  {"annotated_genes":["SJAG_03895","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73396,80189],"is_not":false,"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic cation by a channel that opens when a calcium cation has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium-activated cation channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9717383"],"synonyms":[{"name":"calcium activated cation channel activity","type":"exact"},{"name":"intracellular calcium-activated potassium channel","type":"narrow"},{"name":"polycystin","type":"narrow"}],"termid":"GO:0005227","terms_by_termid":{"GO:0005227":null}}


id: GO:0070158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA in a mitochondrion, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seryl-tRNA aminoacylation","termid":"GO:0006434"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0140053","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"mitochondrial seryl-tRNA aminoacylation","termid":"GO:0070158"}


id: MONDO:0022580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by expressionless facies, thickened facial skin, telecanthus with blepharophimosis, lacrimal duct anomalies, unusual nasal shape, and mild excess interdigital webbing.","definition_xrefs":["PMID:12072799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharo naso facial syndrome van Maldergem type","termid":"MONDO:0022580","xrefs":{"Monarch":{"xref_id":"0022580"}}}


id: MONDO:0014985
data:
  {"annotated_genes":["SJAG_00611"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87352],"is_not":false,"summary":null,"term":"MONDO:0014985"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the MAD2L2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0021190","MONDO:0005570","MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group V","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617243","DOID:0111080","MEDGEN:934619","UMLS:C4310652","GARD:16213"],"synonyms":[{"name":"FANCV","type":"exact"},{"name":"Fanconi Anemia, complementation Group 5","type":"related"},{"name":"Fanconi Anemia, complementation group V","type":"exact"},{"name":"Fanconi Anemia, complementation group type V","type":"exact"},{"name":"Fanconi anaemia caused by mutation in MAD2L2","type":"exact"},{"name":"Fanconi anaemia complementation group type V","type":"exact"},{"name":"Fanconi anemia caused by mutation in MAD2L2","type":"exact"},{"name":"Fanconi anemia complementation group type V","type":"exact"},{"name":"Fanconi anemia, complementation GROUP V","type":"related"},{"name":"MAD2L2 Fanconi anaemia","type":"exact"},{"name":"MAD2L2 Fanconi anemia","type":"exact"}],"termid":"MONDO:0014985","terms_by_termid":{"MONDO:0014985":null},"xrefs":{"Monarch":{"xref_id":"0014985"}}}


id: GO:0005590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(VII) chains; type VII collagen triple helices form antiparallel dimer, which in turn associate laterally to form anchoring fibrils that connect type IV collagen in the basal lamina to plaques in the underlying connective tissue. It binds laminin.","definition_xrefs":["PMID:19693541","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen type VII anchoring fibril","termid":"GO:0098652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type VII trimer","termid":"GO:0005590"}


id: GO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydropterin + H2O = 7,8-dihydrolumazine + NH3.","definition_xrefs":["PMID:38786926","GOC:jl","PMID:19567870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dihydropterin deaminase activity","secondary_identifiers":["MetaCyc:RXN-15261"],"termid":"GO:0004153"}


id: GO:0010652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by chemical coupling","termid":"GO:0010645"},{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"positively_regulates","term_name":"cell communication by chemical coupling","termid":"GO:0010643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by chemical coupling","termid":"GO:0010652"}


id: FYPO:0000284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes unequal mitotic sister chromatid segregation, and as a result the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:vw","PomBase:jh","PomBase:mah","PMID:8769419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"},{"relation_name":"output_of","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation","synonyms":[{"name":"complete but unequal mitotic sister chromatid segregation forming large and small daughter nuclei","type":"exact"},{"name":"large and small daughter nuclei resulting from unequal mitotic sister chromatid segregation","type":"related"},{"name":"large and small daughter nuclei, with complete but unequal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic chromosome segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during vegetative growth","type":"exact"}],"termid":"FYPO:0000284"}


id: PBO:0005383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2-C, Ubc11","termid":"PBO:0005383"}


id: PBO:0088121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar glutathione S-conjugate transporter; ABC-C transporter of the ATP-binding cassette family; required for vacuole fusion; forms stable complexes with vacuole fusion machinery; regulates Vam7p recruitment to vacuoles; role in detoxifying metals (Cd, Hg, As); transports GSSG that is not immediately reduced in cytosol to vacuole; transports unconjugated bilirubin, selenodigluthatione, oxidized glutathione; similar to human cystic fibrosis protein CFTR","termid":"PBO:0088121"}


id: GO:0035837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an ergot alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"ergot alkaloid metabolic process","termid":"GO:0035836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ergot alkaloid biosynthetic process","synonyms":[{"name":"ergot alkaloid anabolism","type":"exact"},{"name":"ergot alkaloid biosynthesis","type":"exact"},{"name":"ergot alkaloid formation","type":"exact"},{"name":"ergot alkaloid synthesis","type":"exact"}],"termid":"GO:0035837"}


id: PBO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 3","termid":"PBO:0072187"}


id: GO:0047640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-aldose + NAD+ = D-aldonolactone + NADH.","definition_xrefs":["MetaCyc:ALDOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:15917"],"synonyms":[{"name":"D-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"aldose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, D-aldohexose","type":"related"}],"termid":"GO:0047640"}


id: GO:0010023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of proanthocyanidin.","definition_xrefs":["GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"proanthocyanidin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-641"],"synonyms":[{"name":"proanthocyanidin anabolism","type":"exact"},{"name":"proanthocyanidin biosynthesis","type":"exact"},{"name":"proanthocyanidin formation","type":"exact"},{"name":"proanthocyanidin synthesis","type":"exact"}],"termid":"GO:0010023"}


id: GO:0005789
data:
  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lipid bilayer surrounding the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"nuclear outer membrane-endoplasmic reticulum membrane network","termid":"GO:0042175"},{"relation_name":"part_of","term_name":"endoplasmic reticulum 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reticulum membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21802294":null},"synonyms":[{"name":"ER membrane","type":"exact"}],"termid":"GO:0005789","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0005789":null,"GO:0008250":null,"GO:0031207":null,"GO:0034098":null,"GO:0042765":null,"GO:0043541":null,"GO:0071261":null,"GO:0072546":null,"GO:0098553":null,"GO:0098554":null,"GO:0098826":null,"GO:0160005":null,"GO:0160219":null,"GO:1990578":null}}


id: MONDO:0005571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high mass or concentration of red blood cells in the blood, either due to an increase in erythropoiesis or a decrease in plasma volume.","definition_xrefs":["NCIT:C26863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"polycythemia","secondary_identifiers":["MESH:D011086","MEDGEN:18552","Orphanet:98427","UMLS:C0032461","DOID:8432","EFO:0005804","HP:0001901","MedDRA:10036051","GARD:19466"],"synonyms":[{"name":"erythrocythemia","type":"exact"},{"name":"polycythemia","type":"exact"},{"name":"polycythemia (disease)","type":"exact"}],"termid":"MONDO:0005571","xrefs":{"Monarch":{"xref_id":"0005571"}}}


id: PBO:0066360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCSD domain containing 1","termid":"PBO:0066360"}


id: MONDO:1011192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"equine neoplasm","termid":"MONDO:0700170"},{"relation_name":"is_a","term_name":"synovial chondromatosis, non-human animal","termid":"MONDO:1010304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis, horse","secondary_identifiers":["OMIA:001174-9796"],"termid":"MONDO:1011192","xrefs":{"Monarch":{"xref_id":"1011192"}}}


id: FYPO:0002516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G2/M transition of the mitotic cell cycle begins earlier than normal. The duration of G2 phase is thus shorter than normal. The mitotic G2/M transition is the point at which a cell commits to entering M phase, and begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed.","definition_xrefs":["GO:0000086","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 phase progression","termid":"FYPO:0000563"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"premature mitotic G2/M phase transition","synonyms":[{"name":"advanced mitotic G2 phase progression","type":"related"},{"name":"advanced mitotic G2/M transition","type":"exact"},{"name":"cell cycle, mitotic G2 advance","type":"related"},{"name":"decreased duration of mitotic G2 phase","type":"related"},{"name":"decreased duration of mitotic G2 phase during vegetative growth","type":"related"},{"name":"decreased mitotic G2 duration","type":"related"},{"name":"increased rate of mitotic G2 phase progression","type":"related"},{"name":"mitotic G2 advance","type":"related"},{"name":"mitotic G2/M transition advance","type":"exact"},{"name":"mitotic G2/M transition advance during vegetative growth","type":"exact"},{"name":"mitotic cell cycle advance at G2/M transition","type":"exact"},{"name":"premature G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"premature mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"premature mitotic G2/M transition","type":"exact"}],"termid":"FYPO:0002516"}


id: PBO:0070327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 16","termid":"PBO:0070327"}


id: PBO:0042241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 4","termid":"PBO:0042241"}


id: PBO:0045887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1 pseudogene 1","termid":"PBO:0045887"}


id: PBO:0045725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 2","termid":"PBO:0045725"}


id: PBO:0087089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L6B; binds 5.8S rRNA; homologous to mammalian ribosomal protein L6, no bacterial homolog; RPL6B has a paralog, RPL6A, that arose from the whole genome duplication","termid":"PBO:0087089"}


id: GO:0003871
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  {"annotated_genes":["SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64263],"is_not":false,"summary":null,"term":"GO:0003871"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate.","definition_xrefs":["RHEA:21196","EC:2.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity","termid":"GO:0042085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R04405","MetaCyc:HOMOCYSMET-RXN"],"synonyms":[{"name":"5-methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"MetE","type":"related"},{"name":"cobalamin-independent methionine synthase activity","type":"related"},{"name":"homocysteine methylase activity","type":"related"},{"name":"methionine synthase (cobalamin-independent) activity","type":"related"},{"name":"methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase activity","type":"related"},{"name":"methyltransferase, tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroyltriglutamate methyltransferase activity","type":"related"}],"termid":"GO:0003871","terms_by_termid":{"GO:0003871":null}}


id: MONDO:0006029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the caecum","direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"cecum cancer","termid":"MONDO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"cecum carcinoma","secondary_identifiers":["SCTID:255081007","DOID:1519","EFO:1000021","MEDGEN:101762","NCIT:C3491","UMLS:C0149640"],"synonyms":[{"name":"caecum carcinoma","type":"exact"},{"name":"carcinoma of caecum","type":"exact"},{"name":"carcinoma of cecum","type":"exact"},{"name":"carcinoma of the cecum","type":"exact"},{"name":"cecal cancer","type":"broad"},{"name":"cecum cancer","type":"broad"},{"name":"cecum carcinoma","type":"exact"}],"termid":"MONDO:0006029","xrefs":{"Monarch":{"xref_id":"0006029"}}}


id: GO:1900107
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nodal signaling pathway.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin receptor signaling pathway","termid":"GO:0032925"},{"relation_name":"regulates","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nodal signaling pathway","synonyms":[{"name":"regulation of nodal signaling","type":"exact"},{"name":"regulation of nodal signalling pathway","type":"exact"}],"termid":"GO:1900107"}


id: PBO:0070597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 64","termid":"PBO:0070597"}


id: FYPO:0006640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"abnormal protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"abnormal protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006640"}


id: GO:0072545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-tyrosine, 2-amino-3-(4-hydroxyphenyl)propanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-tyrosine binding","synonyms":[{"name":"L-Tyr binding","type":"exact"},{"name":"tyrosine binding","type":"broad"}],"termid":"GO:0072545"}


id: PBO:0041296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain containing 3 centriole elongation regulator","termid":"PBO:0041296"}


id: PBO:0054873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2287","termid":"PBO:0054873"}


id: FYPO:0001793
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell shows increased resistance to conditions that degrade the cell wall.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"resistant to cell wall digestion","synonyms":[{"name":"resistant to cell wall digestion during mitotic cell cycle","type":"related"},{"name":"resistant to cell wall digestion during vegetative growth","type":"exact"}],"termid":"FYPO:0001793"}


id: PBO:0062800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein","termid":"PBO:0062800"}


id: GO:0021878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an astrocyte that resides in the forebrain.","definition_xrefs":["GOC:dph","GOC:jid","PMID:16226447","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte fate commitment","termid":"GO:0060018"},{"relation_name":"part_of","term_name":"forebrain astrocyte differentiation","termid":"GO:0021896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte fate commitment","termid":"GO:0021878"}


id: PBO:0017708
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae BET2","termid":"PBO:0017708"}


id: PBO:0084138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity cyclic AMP phosphodiesterase; component of the cAMP-dependent protein kinase signaling system, protects the cell from extracellular cAMP, contains readthrough motif surrounding termination codon","termid":"PBO:0084138"}


id: PBO:0062169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 12 pseudogene","termid":"PBO:0062169"}


id: PBO:0088109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; upregulated under glucose starvation; delivered to the vacuole in a novel pathway separate from the secretory pathway","termid":"PBO:0088109"}


id: PBO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 4","termid":"PBO:0060684"}


id: PBO:0071811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 6","termid":"PBO:0071811"}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: GO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075079)","termid":"GO:0075079"}


id: GO:0033956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid + H2O = a 7-hydroxyisoflavonoid + beta-D-apiofuranosyl-(1->6)-D-glucose.","definition_xrefs":["EC:3.2.1.161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-apiosyl-beta-glucosidase activity","secondary_identifiers":["MetaCyc:RXN-9156","RHEA:21488"],"synonyms":[{"name":"7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid beta-D-apiofuranosyl-(1->6)-D-glucohydrolase activity","type":"related"},{"name":"furcatin hydrolase activity","type":"related"},{"name":"isoflavonoid 7-O-beta-apiosyl-glucoside beta-glucosidase activity","type":"related"},{"name":"isoflavonoid-7-O-beta[D-apiosyl-(1->6)-beta-D-glucoside] disaccharidase activity","type":"related"}],"termid":"GO:0033956"}


id: MONDO:0012319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 3","secondary_identifiers":["UMLS:C1864994","MEDGEN:351270","MESH:C566501","OMIM:609633"],"synonyms":[{"name":"MAFD3","type":"exact"},{"name":"MAJOR affective disorder 3","type":"related"},{"name":"bipolar affective disorder, early-onset","type":"related"},{"name":"major affective disorder 3","type":"exact"},{"name":"major affective disorder 3, early onset","type":"exact"}],"termid":"MONDO:0012319","xrefs":{"Monarch":{"xref_id":"0012319"}}}


id: MONDO:0019672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibular hemimelia is a congenital longitudinal limb deficiency characterized by complete or partial absence of the fibula bone.","definition_xrefs":["Orphanet:93323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular hemimelia","secondary_identifiers":["UMLS:C0265634","icd11.foundation:915482054","MEDGEN:539380","GARD:8659"],"synonyms":[{"name":"congenital longitudinal deficiency of the fibula","type":"exact"},{"name":"fibular longitudinal meromelia","type":"exact"}],"termid":"MONDO:0019672","xrefs":{"Monarch":{"xref_id":"0019672"}}}


id: PBO:0078207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-9","termid":"PBO:0078207"}


id: GO:0035203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lamellocyte differentiation","termid":"GO:0035203"}


id: PBO:0031634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gene_silencing","termid":"PBO:0031634"}


id: PBO:0028546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0028546"}


id: PATO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A optical quality inhering in a bearer by virtue of the bearer's not being clear; not transmitting or reflecting light or radiant energy.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opacity","termid":"PATO:0000957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opaque","synonyms":[{"name":"clouding","type":"related"},{"name":"cloudy","type":"related"},{"name":"non-transparent","type":"exact"}],"termid":"PATO:0000963"}


id: PBO:0028875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_poly(A)_RNA_binding","termid":"PBO:0028875"}


id: PBO:0046201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3, pseudogene","termid":"PBO:0046201"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: MONDO:0100542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by cellular proliferation of hematopoietic cells where a substantial proportion of the cells are derived from a single hematopoietic stem cell lineage.","definition_xrefs":["NCIT:C162188","PMID:34215849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premalignant hematological system disease","termid":"MONDO:0060782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"clonal hematopoiesis","secondary_identifiers":["MEDGEN:1694554","UMLS:C5206406"],"termid":"MONDO:0100542","xrefs":{"Monarch":{"xref_id":"0100542"}}}


id: SO:1001288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory signal that is a stop codon and has effect on efficiency of recoding.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon_signal","synonyms":[{"name":"stop codon signal","type":"exact"}],"termid":"SO:1001288"}


id: MONDO:0013380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a mutation in the BRAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"LEOPARD syndrome 3","secondary_identifiers":["MEDGEN:462321","OMIM:613707","DOID:0080550","UMLS:C3150971","GARD:15694"],"synonyms":[{"name":"BRAF Noonan syndrome with multiple lentigines","type":"exact"},{"name":"LEOPARD syndrome 3","type":"exact"},{"name":"LPRD3","type":"related"},{"name":"Leopard syndrome type 3","type":"exact"},{"name":"Noonan syndrome with multiple lentigines caused by mutation in BRAF","type":"exact"},{"name":"leopard syndrome 3","type":"exact"}],"termid":"MONDO:0013380","xrefs":{"Monarch":{"xref_id":"0013380"}}}


id: MONDO:0014568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 73 (SPG73) is a pure form of hereditary spastic paraplegia characterized by adult onset of crural spastic paraparesis, hyperreflexia, extensor plantar responses, proximal muscle weakness, mild muscle atrophy, decreased vibration sensation at ankles, and mild urinary dysfunction. foot deformities have been reported to eventually occur in some patients. No abnormalities are noted on brain magnetic resonance imaging and peripheral nerve conduction velocity studies.","definition_xrefs":["Orphanet:444099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 73","secondary_identifiers":["MEDGEN:1800404","GARD:17763","DOID:0110818","OMIM:616282","UMLS:C5568981"],"synonyms":[{"name":"CPT1C autosomal dominant pure spastic paraplegia","type":"exact"},{"name":"SPG73","type":"exact"},{"name":"autosomal dominant pure spastic paraplegia caused by mutation in CPT1C","type":"exact"},{"name":"autosomal dominant spastic paraplegia 73","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 73","type":"exact"},{"name":"hereditary spastic paraplegia type 73","type":"exact"},{"name":"spastic paraplegia 73, autosomal dominant","type":"related"}],"termid":"MONDO:0014568","xrefs":{"Monarch":{"xref_id":"0014568"}}}


id: PBO:0017552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF hand family protein, centrin-like","termid":"PBO:0017552"}


id: PBO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0031242"}


id: GO:0042438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin metabolic process","termid":"GO:0006582"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"melanin biosynthetic process","secondary_identifiers":["Reactome:R-HSA-5662702"],"synonyms":[{"name":"melanin anabolism","type":"exact"},{"name":"melanin biosynthesis","type":"exact"},{"name":"melanin formation","type":"exact"},{"name":"melanin synthesis","type":"exact"}],"termid":"GO:0042438"}


id: PBO:0068610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 61, pseudogene","termid":"PBO:0068610"}


id: SO:0000839
data:
  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id: PBO:0064559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POMP pseudogene 1","termid":"PBO:0064559"}


id: GO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate + H+ = L-xylulose + CO2.","definition_xrefs":["EC:4.1.1.34","RHEA:11084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dehydro-L-gulonate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01905","Reactome:R-HSA-5662473","MetaCyc:DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"3-dehydro-L-gulonate carboxy-lyase (L-xylulose-forming)","type":"related"},{"name":"3-dehydro-L-gulonate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate decarboxylase activity","type":"related"},{"name":"keto-L-gulonate decarboxylase activity","type":"related"}],"termid":"GO:0047842"}


id: PBO:0068142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 449","termid":"PBO:0068142"}


id: MONDO:0010308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked condition caused by mutation(s) in the GATA1 gene, encoding erythroid transcription factor. It is characterized by thrombocytopenia, as well as abnormal platelet function and morphology. Dyserythropoietic anemia of variable severity may also be present.","definition_xrefs":["NCIT:C136653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia","secondary_identifiers":["MEDGEN:763703","OMIM:300367","UMLS:C3550789"],"synonyms":[{"name":"X-linked thrombocytopenia, with or without dyserythropoietic Anaemia","type":"exact"},{"name":"X-linked thrombocytopenia, with or without dyserythropoietic Anemia","type":"exact"},{"name":"XLTDA","type":"related"},{"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia","type":"exact"},{"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia, X-linked recessive","type":"exact"}],"termid":"MONDO:0010308","xrefs":{"Monarch":{"xref_id":"0010308"}}}


id: GO:0102782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + epidihydrocholesterin + O2 + NADPH = (22alpha)-hydroxy-cholestanol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cholestanol hydroxylase activity (obsolete GO:0102782)","termid":"GO:0102782"}


id: GO:0015327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cystine(out) + glutamate(in) = cystine(in) + glutamate(out).","definition_xrefs":["TC:2.A.3.8.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"cystine:glutamate antiporter activity","termid":"GO:0015327"}


id: PBO:0030840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_guanine_import","termid":"PBO:0030840"}


id: MONDO:0020627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epileptic encephalopathy, infantile or early childhood (obsolete MONDO:0020627)","secondary_identifiers":["OMIMPS:617711"],"termid":"MONDO:0020627","xrefs":{"Monarch":{"xref_id":"0020627"}}}


id: PBO:0088082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; involved in degradation of polyubiquitinated proteins via the ERAD (ER-associated degradation) pathway; modulates the role of the Cdc48p-Nplp-Ufd1p AAA ATPase complex in delivery of misfolded proteins to the proteasome; protein abundance increases in response to DNA replication stress; human ortholog ASPSCR1 partially complements the yeast null mutant","termid":"PBO:0088082"}


id: GO:0097216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to guanosine tetraphosphate (5'-ppGpp-3'), a guanosine bisphosphate having diphosphate groups at both the 3' and 5'-positions.","definition_xrefs":["PMID:18359660","GOC:imk","PMID:16968770","PMID:15109491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanosine tetraphosphate binding","synonyms":[{"name":"5'-ppGpp-3' binding","type":"exact"}],"termid":"GO:0097216"}


id: PBO:0027105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_rDNA","termid":"PBO:0027105"}


id: MONDO:0800435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cancer, familial, susceptibility to, 3","secondary_identifiers":["MEDGEN:462011","UMLS:C3150661"],"termid":"MONDO:0800435","xrefs":{"Monarch":{"xref_id":"0800435"}}}


id: GO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stretch of less tightly packed chromatin along the polytene chromosome, found between bands.","definition_xrefs":["PMID:11361342","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome interband","termid":"GO:0005705"}


id: GO:0046669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"regulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046669"}


id: SO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_thiouridine","secondary_identifiers":["RNAMOD:057"],"synonyms":[{"name":"2-thiouridine","type":"exact"},{"name":"s2U","type":"exact"},{"name":"two thiouridine","type":"exact"}],"termid":"SO:0001349"}


id: PBO:0074217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 3","termid":"PBO:0074217"}


id: GO:0000111
data:
  {"annotated_genes":["SJAG_01049","SJAG_01887"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72581,73058],"is_not":false,"summary":null,"term":"GO:0000111"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses damaged DNA binding activity. In S. cerevisiae, it is composed of Rad4p and Rad23p.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nucleotide-excision repair factor 2 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NEF2 complex","type":"exact"}],"termid":"GO:0000111","terms_by_termid":{"GO:0000111":null}}


id: PBO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12I","termid":"PBO:0048248"}


id: PATO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000868 vibrissae reflex value (obsolete PATO:0000868)","termid":"PATO:0000868"}


id: MONDO:0015361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015361)","secondary_identifiers":["Orphanet:140459"],"synonyms":[{"name":"AR demyelinating HMSN","type":"exact"}],"termid":"MONDO:0015361","xrefs":{"Monarch":{"xref_id":"0015361"}}}


id: PBO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 2","termid":"PBO:0061834"}


id: PBO:0055956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 70","termid":"PBO:0055956"}


id: PBO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 23","termid":"PBO:0070524"}


id: GO:0046868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular, often complex, membranous structure, sometimes with additional membranous lamellae inside, found in bacteria. They are associated with synthesis of DNA and secretion of proteins.","definition_xrefs":["PMID:33327493","PMID:31921091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"mesosome","secondary_identifiers":["Wikipedia:Mesosome"],"termid":"GO:0046868"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0003674","GO:0038023","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: PBO:0067810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 112","termid":"PBO:0067810"}


id: PBO:0056686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 6","termid":"PBO:0056686"}


id: PBO:0004239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit, predicted histone demethylase Lid2","termid":"PBO:0004239"}


id: PBO:0077870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 1","termid":"PBO:0077870"}


id: MONDO:0015971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic adrenal disease (obsolete MONDO:0015971)","secondary_identifiers":["Orphanet:183637"],"termid":"MONDO:0015971","xrefs":{"Monarch":{"xref_id":"0015971"}}}


id: MONDO:0012403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 7","secondary_identifiers":["UMLS:C1864732","MEDGEN:355279","OMIM:610065"],"synonyms":[{"name":"SLEB7","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0012403","xrefs":{"Monarch":{"xref_id":"0012403"}}}


id: GO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"positive regulation of interleukin-1 production","termid":"GO:0032732"},{"relation_name":"positively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050725","GO:0050718"],"synonyms":[{"name":"activation of interleukin-1 beta production","type":"narrow"},{"name":"positive regulation of IL-1 beta production","type":"exact"},{"name":"positive regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 beta secretion","type":"narrow"},{"name":"stimulation of interleukin-1 beta production","type":"narrow"},{"name":"up regulation of interleukin-1 beta production","type":"exact"},{"name":"up-regulation of interleukin-1 beta production","type":"exact"},{"name":"upregulation of interleukin-1 beta production","type":"exact"}],"termid":"GO:0032731"}


id: MONDO:0100302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any LADD syndrome in which the cause of the disease is a variation in the FGFR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LADD syndrome","termid":"MONDO:0007872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"LADD syndrome 1","secondary_identifiers":["UMLS:C5774323","OMIM:149730","MEDGEN:1824096"],"synonyms":[{"name":"LADD1","type":"exact"},{"name":"lacrimoauriculodentodigital syndrome 1","type":"exact"}],"termid":"MONDO:0100302","xrefs":{"Monarch":{"xref_id":"0100302"}}}


id: GO:0050579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deoxysarpagine + NADP+ = H+ + NADPH + vellosimine.","definition_xrefs":["RHEA:20029","EC:1.1.1.273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"vellosimine dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.273-RXN","KEGG_REACTION:R05827"],"synonyms":[{"name":"10-deoxysarpagine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050579"}


id: PBO:0036293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in Mitotic Arrest","termid":"PBO:0036293"}


id: MONDO:0009435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospasdias B intellectual deficit, Goldblatt type is a very rare multiple congenital anomalies syndrome described in three brothers of one South-African family, and characterized by hypospadias and intellectual deficit, in association with mirocephaly, craniofacial dysmorphism, joint laxity and beaked nails.","definition_xrefs":["Orphanet:2261"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias-intellectual disability, Goldblatt type syndrome","secondary_identifiers":["UMLS:C0795989","OMIM:241760","GARD:2928","SCTID:716096005","MEDGEN:162896","MESH:C563067"],"synonyms":[{"name":"Goldblatt Wallis syndrome","type":"related"},{"name":"Goldblatt-Wallis syndrome","type":"exact"},{"name":"hypospadias intellectual deficit Goldblatt type","type":"related"},{"name":"hypospadias intellectual disability Goldblatt type","type":"related"},{"name":"hypospadias intellectual disability syndrome","type":"related"},{"name":"hypospadias mental retardation Goldblatt type","type":"related"},{"name":"hypospadias mental retardation syndrome","type":"related"},{"name":"hypospadias-intellectual disability syndrome","type":"related"},{"name":"hypospadias-mental retardation syndrome","type":"related"}],"termid":"MONDO:0009435","xrefs":{"Monarch":{"xref_id":"0009435"}}}


id: MONDO:0021146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Various conditions with the symptom of headache. Headache disorders are classified into major groups, such as primary headache disorders (based on characteristics of their headache symptoms) and secondary headache disorders (based on their etiologies). (International Classification of Headache Disorders, 2nd ed. Cephalalgia 2004: suppl 1)","definition_xrefs":["MESH:D020773"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"headache disorder","secondary_identifiers":["MEDGEN:140743","SCTID:230461009","UMLS:C0393735","EFO:0009550"],"synonyms":[{"name":"cephalgia syndrome","type":"related"},{"name":"cephalgia syndromes","type":"related"},{"name":"chronic daily headache","type":"related"},{"name":"chronic daily headaches","type":"related"},{"name":"chronic headache","type":"related"},{"name":"chronic headaches","type":"related"},{"name":"daily headache, chronic","type":"related"},{"name":"daily headaches, chronic","type":"related"},{"name":"headache disorder","type":"exact"},{"name":"headache syndrome","type":"related"},{"name":"headache syndromes","type":"related"},{"name":"headache, chronic","type":"related"},{"name":"headache, chronic daily","type":"related"},{"name":"headache, intractable","type":"related"},{"name":"headaches, chronic","type":"related"},{"name":"headaches, chronic daily","type":"related"},{"name":"headaches, intractable","type":"related"},{"name":"intractable headache","type":"related"},{"name":"intractable headaches","type":"related"},{"name":"syndrome, headache","type":"related"}],"termid":"MONDO:0021146","xrefs":{"Monarch":{"xref_id":"0021146"}}}


id: PBO:0041666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK2 associated cullin domain 1","termid":"PBO:0041666"}


id: FYPO:0005618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of repair of double-strand breaks formed as part of meiotic recombination is longer than normal.","definition_xrefs":["PMID:18378696","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000298","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiotic recombination double-strand break repair","synonyms":[{"name":"increased duration of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair during meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"prolonged meiotic recombination double-strand break repair","type":"exact"}],"termid":"FYPO:0005618"}


id: PBO:0081236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 2","termid":"PBO:0081236"}


id: PBO:0015220
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homooligomeric","termid":"PBO:0015220"}


id: PBO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase (predicted)","termid":"PBO:0000224"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: PBO:0017929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transmembrane transporter (predicted)","termid":"PBO:0017929"}


id: GO:0006952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response","secondary_identifiers":["GO:0042829","GO:0002217"],"synonyms":[{"name":"antimicrobial peptide activity","type":"related"},{"name":"defence response","type":"exact"},{"name":"defense/immunity protein activity","type":"related"},{"name":"physiological defense response","type":"exact"}],"termid":"GO:0006952"}


id: FYPO:0002753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing sulfate ions as the sole sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"abolished cell population growth on sulfate sulfur source","synonyms":[{"name":"abolished cell population growth on sulphate sulphur source","type":"exact"},{"name":"abolished growth on sulfate sulfur source","type":"broad"},{"name":"abolished sulfate utilization","type":"related"},{"name":"abolished vegetative cell population growth on sulfate ion sulfur source","type":"exact"},{"name":"cell population growth on sulfate sulfur source abolished","type":"exact"},{"name":"inability to utilize sulphate as sole sulphur source","type":"related"}],"termid":"FYPO:0002753"}


id: PBO:0081175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 21","termid":"PBO:0081175"}


id: PBO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1 like","termid":"PBO:0060149"}


id: CHEBI:32130
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver(1+) nitrate","termid":"CHEBI:32130"}


id: PBO:0046617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group S71 member 2","termid":"PBO:0046617"}


id: MONDO:0012061
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","definition":"Sick sinus syndrome is a rare cardiac rhythm disease, usually of the elderly, characterized by electrocardiographic findings of sinus bradycardia, atrial fibrillation, atrial tachycardia sinus arrest, or sino-atrial block, and that manifest with symptoms like syncope, dizziness, palpitations, fatigue, or even heart failure. It results from malfunction of the cardiac conduction system, probably secondary to degenerative fibrosis of nodal tissue in the elderly or secondary to cardiac disorders in younger patients.","definition_xrefs":["Orphanet:166282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sick sinus syndrome","termid":"MONDO:0001823"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial sick sinus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10040639","UMLS:C0340491","icd11.foundation:1495462959","GARD:13663","SCTID:233913007","MEDGEN:573766","OMIMPS:608567","MESH:C563907"],"synonyms":[{"name":"SSS1","type":"related"},{"name":"familial sinus node dysfunction","type":"exact"},{"name":"hereditary sick sinus syndrome","type":"exact"},{"name":"sick sinus syndrome 1, autosomal recessive","type":"related"}],"termid":"MONDO:0012061","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0012061"}}}


id: PBO:0065611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 5","termid":"PBO:0065611"}


id: PR:Q9Y7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC2H8.02 gene.","definition_xrefs":["UniProtKB:Q9Y7Q9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolite transporter C2H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.02","synonyms":[{"name":"Spom972h-SPCC2H8.02","type":"exact"}],"termid":"PR:Q9Y7Q9"}


id: MONDO:1011625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xanthinuria that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, goat","secondary_identifiers":["OMIA:001283-9925"],"termid":"MONDO:1011625","xrefs":{"Monarch":{"xref_id":"1011625"}}}


id: MONDO:0004988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the breast","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast adenocarcinoma","secondary_identifiers":["MEDGEN:167809","UMLS:C0858252","NCIT:C5214","DOID:3458","EFO:0000304"],"synonyms":[{"name":"adenocarcinoma of breast","type":"exact"},{"name":"adenocarcinoma of the breast","type":"exact"},{"name":"breast adenocarcinoma","type":"exact"},{"name":"mammary adenocarcinoma","type":"exact"}],"termid":"MONDO:0004988","xrefs":{"Monarch":{"xref_id":"0004988"}}}


id: GO:0003300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle hypertrophy","termid":"GO:0014897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle hypertrophy","termid":"GO:0003300"}


id: POMBASE_GENE_EX_REL_INTERNAL:modified_residue
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"For internal PomBase use: modified residue position","definition_xrefs":["PomBase:kmr"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_residue","termid":"POMBASE_GENE_EX_REL_INTERNAL:modified_residue"}


id: PBO:0012048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific PIL domain protein Meu14","termid":"PBO:0012048"}


id: PBO:0067436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 557, pseudogene","termid":"PBO:0067436"}


id: PBO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 36","termid":"PBO:0071738"}


id: GO:0018285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 2Fe-2S iron-sulfur cluster via tetrakis-L-cysteinyl diiron disulfide.","definition_xrefs":["RESID:AA0137"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl diiron disulfide (obsolete GO:0018285)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tetrakis-L-cysteinyl diiron disulphide","type":"exact"}],"termid":"GO:0018285"}


id: SO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome variation derived from an event during meiosis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_variation","termid":"SO:0000240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_variation","synonyms":[{"name":"assortment derived variation","type":"related"}],"termid":"SO:0001504"}


id: PBO:0055165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2585","termid":"PBO:0055165"}


id: PBO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 1","termid":"PBO:0061149"}


id: PBO:0073823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A2 intronic transcript 1","termid":"PBO:0073823"}


id: GO:1900771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumitremorgin B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumitremorgin B catabolic process (obsolete GO:1900771)","synonyms":[{"name":"Lanosulin breakdown","type":"related"},{"name":"Lanosulin catabolic process","type":"related"},{"name":"Lanosulin catabolism","type":"related"},{"name":"Lanosulin degradation","type":"related"},{"name":"fumitremorgin B breakdown","type":"exact"},{"name":"fumitremorgin B catabolism","type":"exact"},{"name":"fumitremorgin B degradation","type":"exact"}],"termid":"GO:1900771"}


id: MONDO:0008834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, nasal polyps, and aspirin intolerance","secondary_identifiers":["OMIM:208550","UMLS:C1859648","DOID:0111579","MEDGEN:347198"],"synonyms":[{"name":"Asa triad","type":"related"},{"name":"asthma and nasal polyps","type":"related"},{"name":"asthma, aspirin-induced, susceptibility to","type":"related"},{"name":"asthma, nasal polyps, and aspirin intolerance","type":"exact"}],"termid":"MONDO:0008834","xrefs":{"Monarch":{"xref_id":"0008834"}}}


id: PBO:0073113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1","termid":"PBO:0073113"}


id: PR:O74949
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC553.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.12c","synonyms":[{"name":"Spom972h-SPCC553.12c","type":"exact"}],"termid":"PR:O74949"}


id: PBO:0051757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate multikinase pseudogene 1","termid":"PBO:0051757"}


id: GO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction (obsolete GO:0052208)","synonyms":[{"name":"modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052208"}


id: PBO:0004922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN component scaffold protein Sid4","termid":"PBO:0004922"}


id: PATO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000227 motor performance (obsolete PATO:0000227)","termid":"PATO:0000227"}


id: PBO:0028113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_G418","termid":"PBO:0028113"}


id: GO:0038114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-21 binding to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-21","termid":"GO:0098757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-21-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9020958"],"synonyms":[{"name":"IL-21-mediated signaling pathway","type":"exact"},{"name":"interleukin-21-mediated signalling pathway","type":"exact"}],"termid":"GO:0038114"}


id: PATO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary","termid":"PATO:0002108"}


id: PBO:0082194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alkaline ceramidase; also has reverse (CoA-independent) ceramide synthase activity; catalyzes both breakdown and synthesis of phytoceramide; overexpression confers fumonisin B1 resistance; YPC1 has a paralog, YDC1, that arose from the whole genome duplication","termid":"PBO:0082194"}


id: PBO:0074358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4 pseudogene 1","termid":"PBO:0074358"}


id: PBO:0049761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2 pseudogene 1","termid":"PBO:0049761"}


id: PBO:0024853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog Lam2","termid":"PBO:0024853"}


id: PBO:0027206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell","termid":"PBO:0027206"}


id: GO:0044735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant negative regulation in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.","definition_xrefs":["GOC:fj","PMID:23034652","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of acid-sensing ion channel activity in another organism","termid":"GO:0044733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of ASIC channel activity in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in other organism","type":"exact"}],"termid":"GO:0044735"}


id: GO:0061150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides an the renal system into a series of segments along its proximal/distal axis.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"is_a","term_name":"renal system pattern specification","termid":"GO:0072048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system segmentation","synonyms":[{"name":"urinary tract segmentation","type":"exact"}],"termid":"GO:0061150"}


id: GO:0003690
data:
  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to double-stranded DNA.","definition_xrefs":["GOC:vw","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA 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id: MONDO:0006403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the salivary glands. It usually originates in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C40410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"carcinoma ex pleomorphic adenoma","termid":"MONDO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"salivary gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["DOID:297","EFO:1000516","MEDGEN:274190","UMLS:C1519172"],"synonyms":[{"name":"pleomorphic adenoma carcinoma","type":"related"},{"name":"saliva-secreting gland carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"salivary gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006403","xrefs":{"Monarch":{"xref_id":"0006403"}}}


id: PR:O60145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.15","secondary_identifiers":["UniProtKB:O60145"],"synonyms":[{"name":"Spom972h-CDK10","type":"exact"}],"termid":"PR:O60145"}


id: PBO:0029987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation","termid":"PBO:0029987"}


id: GO:0060887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epidermis of the limb over time, from its formation to the mature structure. The limb epidermis is the outer epithelial layer of the limb, it is a complex stratified squamous epithelium.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis development","termid":"GO:0060887"}


id: MONDO:0020378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract 16 multiple types","termid":"MONDO:0013411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset posterior polar cataract","secondary_identifiers":["GARD:16889","UMLS:C0858617","MEDGEN:163646","Orphanet:98993"],"termid":"MONDO:0020378","xrefs":{"Monarch":{"xref_id":"0020378"}}}


id: GO:0042469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of versicolorin A to sterigmatocystin.","definition_xrefs":["PMID:1339261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"versicolorin reductase activity","termid":"GO:0042469"}


id: MONDO:1010616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hypothyroidism in dogs in which the cause of the disease is a mutation in the SCL5AG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, dog","termid":"MONDO:1010602"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyshormonogenic hypothyroidism with goiter, SLC5A5-related, dog","secondary_identifiers":["OMIA:002174-9615"],"termid":"MONDO:1010616","xrefs":{"Monarch":{"xref_id":"1010616"}}}


id: MONDO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm arising from any of the organs of the thoracic cavity. Representative examples include pleural adenomatoid tumor, chest wall lipoma, mediastinal schwannoma, and lung hamartoma.","definition_xrefs":["NCIT:C4565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracic benign neoplasm","secondary_identifiers":["DOID:0060097","ICD9:229.8","SCTID:255059002","MEDGEN:138065","UMLS:C0346440","MONDO:0021448"],"synonyms":[{"name":"benign neoplasm of the thorax","type":"exact"},{"name":"benign neoplasm of thorax","type":"exact"},{"name":"benign thoracic neoplasm","type":"exact"},{"name":"benign thoracic tumor","type":"exact"},{"name":"benign thoracic tumour","type":"exact"},{"name":"benign tumor of the thorax","type":"exact"},{"name":"benign tumor of thorax","type":"exact"},{"name":"benign tumour of the thorax","type":"exact"},{"name":"benign tumour of thorax","type":"exact"},{"name":"thoracic segment of trunk benign neoplasm","type":"exact"}],"termid":"MONDO:0000634","xrefs":{"Monarch":{"xref_id":"0000634"}}}


id: GO:0051287
data:
  {"annotated_genes":["SJAG_02176","SJAG_02135","SJAG_00502","SJAG_06622","SJAG_00281","SJAG_00234","SJAG_03152","SJAG_04362","SJAG_02313","SJAG_01012","SJAG_06621","SJAG_00409","SJAG_01137","SJAG_00235","SJAG_01075","SJAG_04652","SJAG_01432","SJAG_04186","SJAG_00027","SJAG_00636","SJAG_03562","SJAG_03828","SJAG_02945","SJAG_04039","SJAG_03903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57930,58973,60210,61038,61859,62908,62942,63084,63538,63650,64638,64858,69556,69987,70108,109715,109716,109720,109721,119081],"is_not":false,"summary":null,"term":"GO:0051287"},{"annotations":[72558,112282,71177,77696,79132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070403"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00235":null,"SJAG_00281":null,"SJAG_00409":null,"SJAG_00502":null,"SJAG_00636":null,"SJAG_01012":null,"SJAG_01075":null,"SJAG_01137":null,"SJAG_01432":null,"SJAG_02135":null,"SJAG_02176":null,"SJAG_02313":null,"SJAG_02945":null,"SJAG_03152":null,"SJAG_03562":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04362":null,"SJAG_04652":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NAD binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051288"],"synonyms":[{"name":"NAD or NADH binding","type":"related"},{"name":"NAD+ or NADH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0051287","terms_by_termid":{"GO:0051287":null,"GO:0070403":null}}


id: FYPO:0003183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing phleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on phleomycin","synonyms":[{"name":"normal cell population growth in presence of phleomycin","type":"exact"},{"name":"normal cell population growth on phleomycin","type":"exact"},{"name":"normal cellular response to phleomycin","type":"related"},{"name":"normal vegetative cell population growth on phleomycin","type":"exact"}],"termid":"FYPO:0003183"}


id: PBO:0057324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519d","termid":"PBO:0057324"}


id: PBO:0039349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and beclin 1 regulator 1","termid":"PBO:0039349"}


id: FYPO:0004034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased glutathione transferase activity","synonyms":[{"name":"reduced glutathione transferase activity","type":"exact"}],"termid":"FYPO:0004034"}


id: GO:0043785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-phenyllactate + [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methyl {[(3R)-3-hydroxy-2,2-dimethyl-3-({2-[(2-{[(2E)-3-phenylprop-2-enoyl]sulfanyl}ethyl)carbamoyl]ethyl}carbamoyl)propyl phosphonato]oxy}phosphonate = (R)-3-phenyllactoyl-CoA + trans-cinnamate.","definition_xrefs":["RHEA:15601","EC:2.8.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cinnamoyl-CoA:phenyllactate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.17-RXN","KEGG_REACTION:R07796"],"synonyms":[{"name":"(E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase activity","type":"exact"},{"name":"FldA","type":"related"}],"termid":"GO:0043785"}


id: PBO:0055733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7 downstream neighbor","termid":"PBO:0055733"}


id: PBO:0070824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 2","termid":"PBO:0070824"}


id: GO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous ossification","secondary_identifiers":["Wikipedia:Intramembranous_ossification"],"synonyms":[{"name":"dermal ossification","type":"narrow"},{"name":"intramembranous bone ossification","type":"related"}],"termid":"GO:0001957"}


id: MONDO:0005140
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm originating from the surface ovarian epithelium. It accounts for the greatest number of deaths from malignancies of the female genital tract and is the fifth leading cause of cancer fatalities in women. It is predominantly a disease of older white women of northern European extraction, but it is seen in all ages and ethnic groups. Adenocarcinomas constitute the vast majority of ovarian carcinomas. The pattern of metastatic spread in ovarian carcinoma is similar regardless of the microscopic type. The most common sites of involvement are the contralateral ovary, peritoneal cavity, para-aortic and pelvic lymph nodes, and liver. Lung and pleura are the most common sites of extra-abdominal spread. The primary form of therapy is surgical. The overall prognosis of ovarian carcinoma remains poor, a direct result of its rapid growth rate and the lack of early symptoms. --2002","definition_xrefs":["NCIT:C4908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinoma","secondary_identifiers":["UMLS:C4721610","EFO:0001075","DOID:4001","MEDGEN:1648335"],"synonyms":[{"name":"carcinoma of ovary","type":"exact"},{"name":"carcinoma of the ovary","type":"exact"},{"name":"epithelial ovarian cancer","type":"exact"},{"name":"ovarian cancer","type":"broad"},{"name":"ovarian carcinoma","type":"exact"},{"name":"ovarian epithelial cancer","type":"broad"},{"name":"ovary carcinoma","type":"exact"}],"termid":"MONDO:0005140","xrefs":{"Monarch":{"xref_id":"0005140"}}}


id: MONDO:0013296
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id: MONDO:0007795
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id: PBO:0075346
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id: GO:0021762
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id: FYPO:0000573
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id: PBO:0059512
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id: PBO:0076288
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id: MONDO:0045024
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id: GO:0060058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process of mammary epithelial cells during mammary gland involution.","definition_xrefs":["PMID:15282149","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in morphogenesis","termid":"GO:1902339"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in mammary gland involution","termid":"GO:0060057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in mammary gland involution","synonyms":[{"name":"positive regulation of apoptosis involved in mammary gland involution","type":"narrow"}],"termid":"GO:0060058"}


id: GO:0035278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs.","definition_xrefs":["PMID:15196554","PMID:14744438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"miRNA mediated inhibition of translation","type":"exact"},{"name":"miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035278"}


id: PBO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase (predicted)","termid":"PBO:0001126"}


id: PBO:0074389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle induced lncRNA, enhancer of proliferation","termid":"PBO:0074389"}


id: PBO:0056667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 5","termid":"PBO:0056667"}


id: PBO:0048633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 1 pseudogene 1","termid":"PBO:0048633"}


id: GO:0004993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting the signal across the membrane by activating an associated G-protein. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor activity","secondary_identifiers":["GO:0001585","GO:0016609","Wikipedia:5-HT_receptor"],"synonyms":[{"name":"5-HT receptor","type":"exact"},{"name":"5-hydroxytryptamine receptor","type":"exact"},{"name":"G protein coupled serotonin receptor activity","type":"exact"},{"name":"G-protein coupled serotonin receptor activity","type":"exact"}],"termid":"GO:0004993"}


id: GO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0043280)","synonyms":[{"name":"activation of caspase activity","type":"narrow"},{"name":"positive regulation of caspase activity","type":"broad"},{"name":"stimulation of caspase activity","type":"narrow"},{"name":"up regulation of caspase activity","type":"exact"},{"name":"up-regulation of caspase activity","type":"exact"},{"name":"upregulation of caspase activity","type":"exact"}],"termid":"GO:0043280"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_03118","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72881,78429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: FYPO:0001801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype in which a cell is unable to survive at a high temperature at which wild-type cells survive.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable cell at high temperature (obsolete FYPO:0001801)","synonyms":[{"name":"lethal in cell at high temperature","type":"exact"}],"termid":"FYPO:0001801"}


id: GO:0008678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-gluconate + NAD+ = 3-dehydro-2-deoxy-D-gluconate + NADH + H+.","definition_xrefs":["EC:1.1.1.125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-deoxy-D-gluconate 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:KDUD-RXN","RHEA:12160"],"synonyms":[{"name":"2-deoxy-D-gluconate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"2-deoxygluconate dehydrogenase activity","type":"related"},{"name":"2-keto-3-deoxygluconate oxidoreductase activity","type":"related"}],"termid":"GO:0008678"}


id: PBO:0040301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase plasma membrane Ca2+ transporting 3","termid":"PBO:0040301"}


id: MOD:00860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that produces an amino acid residue containing an exogenous sulfur atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur containing modified residue","termid":"MOD:00860"}


id: MONDO:0019499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Turner syndrome is a chromosomal disorder associated with the complete or partial absence of an X chromosome.","definition_xrefs":["Orphanet:881"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"Turner syndrome","secondary_identifiers":["NORD:1806","icd11.foundation:1987089698","DOID:3491","GARD:7831","NCIT:C26900","SCTID:38804009","UMLS:C0041408","MESH:D014424","MEDGEN:21734","ICD9:758.7","MedDRA:10045181","NANDO:2200410"],"synonyms":[{"name":"45, X syndrome","type":"related"},{"name":"45,X gonadal dysgenesis","type":"exact"},{"name":"45,X syndrome","type":"exact"},{"name":"45,X/46,XX syndrome","type":"exact"},{"name":"45,X0 syndrome","type":"exact"},{"name":"45X syndrome","type":"exact"},{"name":"Bonnevie-Ullrich syndrome","type":"related"},{"name":"Schereshevkii Turner syndrome","type":"related"},{"name":"Turner Varny syndrome","type":"related"},{"name":"Ullrich-Turner syndrome","type":"related"},{"name":"XO syndrome","type":"exact"},{"name":"chromosome X monosomy X","type":"related"},{"name":"genital dwarfism","type":"related"},{"name":"genital dwarfism, Turner type","type":"related"},{"name":"gonadal dysgenesis","type":"broad"},{"name":"gonadal dysgenesis (45,X)","type":"related"},{"name":"gonadal dysgenesis - Turner","type":"exact"},{"name":"gonadal dysgenesis Turner type","type":"related"},{"name":"karyotype 45, X","type":"exact"},{"name":"monosomy X","type":"narrow"},{"name":"monosomy X syndrome","type":"exact"}],"termid":"MONDO:0019499","xrefs":{"Monarch":{"xref_id":"0019499"}}}


id: PBO:0117151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS1 antisense RNA 1","termid":"PBO:0117151"}


id: MONDO:0004761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urethral diverticulum (obsolete MONDO:0004761)","secondary_identifiers":["DOID:9341","ICD9:599.2"],"synonyms":[{"name":"obsolete urethral diverticulum (disease)","type":"exact"}],"termid":"MONDO:0004761","xrefs":{"Monarch":{"xref_id":"0004761"}}}


id: PBO:0091358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, quiescence specific","termid":"PBO:0091358"}


id: GO:0061338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A heart process that modulates the propagation of the signal that causes the heart muscle to contract.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete atrioventricular node impulse conduction delay (obsolete GO:0061338)","synonyms":[{"name":"atrioventricular node impulse conduction delay","type":"exact"}],"termid":"GO:0061338"}


id: PR:O14296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01849","PRO:DNx","PANTHER:PTHR10476:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.14","secondary_identifiers":["UniProtKB:O14296"],"synonyms":[{"name":"Spom972h-CHMP3","type":"exact"}],"termid":"PR:O14296"}


id: GO:1903503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of ATPase inhibitor activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:16170325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATPase inhibitor complex","termid":"GO:1903503"}


id: MONDO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL7-related cold-induced sweating-like syndrome","secondary_identifiers":["Orphanet:603694","UMLS:C5680211","GARD:22437","MEDGEN:1842368"],"synonyms":[{"name":"KLHL7-related Crisponi-like syndrome","type":"exact"}],"termid":"MONDO:0035824","xrefs":{"Monarch":{"xref_id":"0035824"}}}


id: PBO:0041845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent serine protein kinase","termid":"PBO:0041845"}


id: GO:0031726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR1 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR1 chemokine receptor binding","synonyms":[{"name":"CCR1 chemokine receptor ligand","type":"narrow"},{"name":"macrophage inflammatory protein-1 alpha receptor binding","type":"exact"}],"termid":"GO:0031726"}


id: PBO:0072494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 23","termid":"PBO:0072494"}


id: MONDO:0010081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic stenosis, membranous","secondary_identifiers":["UMLS:C1848979","GARD:18242","OMIM:271950","MESH:C564793","MEDGEN:336468"],"synonyms":[{"name":"subaortic stenosis, membranous","type":"exact"}],"termid":"MONDO:0010081","xrefs":{"Monarch":{"xref_id":"0010081"}}}


id: PBO:0031628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_sporulation","termid":"PBO:0031628"}


id: PBO:0038434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase","termid":"PBO:0038434"}


id: MONDO:0007367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 1","secondary_identifiers":["MEDGEN:338959","UMLS:C1852577","SCTID:230432008","MESH:C565162","DOID:0111307","ICD9:780.39","OMIM:121210"],"synonyms":[{"name":"FEB1","type":"exact"},{"name":"convulsions, familial febrile","type":"related"},{"name":"convulsions, familial febrile, 1","type":"related"},{"name":"febrile seizures, familial, 1","type":"exact"}],"termid":"MONDO:0007367","xrefs":{"Monarch":{"xref_id":"0007367"}}}


id: GO:0015577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a galactitol from one side of a membrane to the other. Galactitol is the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"galactitol transmembrane transporter activity","secondary_identifiers":["GO:0015588"],"synonyms":[{"name":"galactitol permease activity","type":"exact"}],"termid":"GO:0015577"}


id: PBO:0071419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 25","termid":"PBO:0071419"}


id: MONDO:0003901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histologically benign tumor, usually cystic with a vascular mural nodule, that is most often found in the cerebellum though it has been reported at other sites within the neuraxis. It is associated with von Hippel-Lindau disease (VHL gene located on chr 3p25-26).","definition_xrefs":["NCIT:C5146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial hemangioma","termid":"MONDO:0002328"},{"relation_name":"is_a","term_name":"hemangioblastoma","termid":"MONDO:0016748"},{"relation_name":"is_a","term_name":"benign neoplasm of cerebellum","termid":"MONDO:0021499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar hemangioblastoma","secondary_identifiers":["DOID:6500","UMLS:C1332900","MEDGEN:234108"],"synonyms":[{"name":"angioblastoma of cerebellum","type":"exact"},{"name":"angioblastoma of the cerebellum","type":"exact"},{"name":"cerebellar angioblastoma","type":"exact"},{"name":"cerebellar capillary hemangioblastoma","type":"exact"},{"name":"cerebellar hemangioblastoma","type":"exact"},{"name":"cerebellum hemangioblastoma","type":"exact"},{"name":"hemangioblastoma of cerebellum","type":"exact"},{"name":"hemangioblastoma of the cerebellum","type":"exact"}],"termid":"MONDO:0003901","xrefs":{"Monarch":{"xref_id":"0003901"}}}


id: GO:1990503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in neurons and associated with the formation of dendrodendritic gap junctions.","definition_xrefs":["PMID:7869120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dendritic lamellar body","synonyms":[{"name":"DLB","type":"exact"}],"termid":"GO:1990503"}


id: PBO:0067205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 270, pseudogene","termid":"PBO:0067205"}


id: GO:0052195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near other organism involved in symbiotic interaction (obsolete GO:0052195)","synonyms":[{"name":"movement on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052195"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: PBO:0042939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac hypertrophy associated epigenetic regulator 1","termid":"PBO:0042939"}


id: GO:0101030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a tRNA anticodon loop by replacing guanine with queuonine. Reaction is tRNA guanine + queuine = tRNA queuine + guanine.","definition_xrefs":["GOC:vw","PMID:24911101","GOC:PomBase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA-guanine transglycosylation","termid":"GO:0101030"}


id: GO:0060474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the controlled movement of a flagellated sperm cell is initiated as part of the process required for flagellated sperm to reach fertilization competence.","definition_xrefs":["GOC:cilia","GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"positive regulation of flagellated sperm motility","termid":"GO:1902093"},{"relation_name":"part_of","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flagellated sperm motility involved in capacitation","synonyms":[{"name":"positive regulation of sperm motility involved in capacitation","type":"related"}],"termid":"GO:0060474"}


id: GO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["GOC:add","PMID:15531770","PMID:16181338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class II","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002491"}


id: PBO:0004505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg5","termid":"PBO:0004505"}


id: GO:0031533
data:
  {"annotated_genes":["SJAG_01724","SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63976,68998],"is_not":false,"summary":null,"term":"GO:0031533"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of an RNA 5' triphosphatase and a guanyl transferase (Cet1p and Ceg1p in S. cerevisiae; Pct1 and Ceg1 in S. pombe) and is involved in mRNA capping.","definition_xrefs":["GOC:vw","PMID:10347220","PMID:12455993","PMID:9345280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mRNA capping enzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null},"termid":"GO:0031533","terms_by_termid":{"GO:0031533":null}}


id: PBO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mercaptoethanol","termid":"PBO:0031001"}


id: PBO:0052662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 30","termid":"PBO:0052662"}


id: SO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non-coding stem-loop RNA present in nematodes and insects, functionally and structurally related to vertebrate Y RNA.","definition_xrefs":["PMID:30666901","PMID:25908866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sbRNA","synonyms":[{"name":"Stem-bulge RNA","type":"exact"},{"name":"stem_bulge_RNA","type":"exact"}],"termid":"SO:0002354"}


id: GO:0045169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large intracellular spectrin-rich structure that has been found in insect germline cells and mammalian hematopoietic cells. The fusome is an elongated, branched structure, formed from the spherical spectrosome organelle.","definition_xrefs":["PMID:12655376","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"fusome","termid":"GO:0045169"}


id: GO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + NAD+ + H2O = hydroxylamine + NADH + H+.","definition_xrefs":["EC:1.7.1.10","MetaCyc:HYDROXYLAMINE-REDUCTASE-NADH-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxylamine reductase (NADH) activity","secondary_identifiers":["RHEA:20581"],"synonyms":[{"name":"N-hydroxy amine reductase activity","type":"related"},{"name":"NADH-hydroxylamine reductase activity","type":"related"},{"name":"NADH2:hydroxylamine oxidoreductase activity","type":"related"},{"name":"NADH:hydroxylamine oxidoreductase activity","type":"related"},{"name":"ammonium dehydrogenase activity","type":"related"},{"name":"ammonium:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxylamine reductase (NADH2)","type":"related"}],"termid":"GO:0050460"}


id: GO:0022600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:isa_complete","GOC:mtg_cardio","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive system process","termid":"GO:0022600"}


id: GO:0033353
data:
  {"annotated_genes":["SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77851],"is_not":false,"summary":null,"term":"GO:0033353"}]},"cv_name":"biological_process","definition":"A cyclic series of interconversions involving S-adenosylmethionine, S-adenosyl-L-homocysteine, L-cysteine, and L-methionine. Couples utilization of the methyl group of SAM with recycling of the homocysteinyl group and regeneration of methionine.","definition_xrefs":["MetaCyc:PWY-5041","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-adenosylmethionine cycle","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"SAM cycle","type":"exact"},{"name":"activated methyl cycle","type":"exact"}],"termid":"GO:0033353","terms_by_termid":{"GO:0033353":null}}


id: PBO:0031453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_nuclear_inner_membrane","termid":"PBO:0031453"}


id: PBO:0013460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo70","termid":"PBO:0013460"}


id: PBO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific GPI anchored protein family","termid":"PBO:0000069"}


id: GO:2000211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of glutamate metabolic process","synonyms":[{"name":"regulation of glutamate metabolism","type":"exact"},{"name":"regulation of glutamic acid metabolic process","type":"exact"},{"name":"regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000211"}


id: GO:0000836
data:
  {"annotated_genes":["SJAG_04384","SJAG_01134","SJAG_01051","SJAG_03345","SJAG_03841","SJAG_05274","SJAG_01709"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89595,104285,105135,105620,107987,109875,117454],"is_not":false,"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal and membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p. In mammals, this complex contains the ubiquitin ligase HRD1 (Synoviolin) or AMFR (gp78).","definition_xrefs":["PMID:16873066","GOC:bf","PMID:16619026","GOC:elh","PMID:21454652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005789","GO:0005575","GO:0032991","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HRD1 ubiquitin ligase complex","type":"related"}],"termid":"GO:0000836","terms_by_termid":{"GO:0000836":null}}


id: PBO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 3","termid":"PBO:0072126"}


id: PBO:0069168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 420, pseudogene","termid":"PBO:0069168"}


id: FYPO:0002896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to calcium ions. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during cellular response to calcium ion","synonyms":[{"name":"normal transcription during cellular response to calcium","type":"exact"},{"name":"normal transcription during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"normal transcription in response to calcium","type":"exact"}],"termid":"FYPO:0002896"}


id: GO:0072025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the distal convoluted tubule over time, from its formation to the mature structure. The distal convoluted tubule is the first segment of the nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal convoluted tubule development","termid":"GO:0072025"}


id: PBO:0079387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 2B class IIb pseudogene 1","termid":"PBO:0079387"}


id: PBO:0028024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle","termid":"PBO:0028024"}


id: FYPO:0007531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is decreased at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PMID:22144463","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","termid":"FYPO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007531"}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: FYPO:0005776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing v.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on acetaldehyde","synonyms":[{"name":"normal cell population growth in presence of acetaldehyde","type":"exact"},{"name":"normal cell population growth on acetaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on acetaldehyde","type":"exact"}],"termid":"FYPO:0005776"}


id: GO:0098638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any laminin protein binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin binding","termid":"GO:0043236"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0098631","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"laminin binding involved in cell-matrix adhesion","termid":"GO:0098638"}


id: GO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a neuronal projection over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrograde extension","termid":"GO:0003389"}


id: MONDO:0958267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic bridging bronchus","secondary_identifiers":["MEDGEN:1853159","Orphanet:648992","UMLS:C5816737"],"termid":"MONDO:0958267","xrefs":{"Monarch":{"xref_id":"0958267"}}}


id: GO:0008297
data:
  {"annotated_genes":["SJAG_05280","SJAG_05373","SJAG_00377","SJAG_01648","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74535,88895,101467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[73233,97459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_01648":null,"SJAG_02908":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004527","GO:0003674","GO:0003824","GO:0016787","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"single-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008297","terms_by_termid":{"GO:0008310":null,"GO:0045145":null}}


id: FYPO:0004974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere localization, a process in which a telomere is transported to, and/or maintained in, a specific location, is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere localization during mitotic interphase","synonyms":[{"name":"normal telomere localisation during mitotic interphase","type":"exact"},{"name":"normal telomere localization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal telomere localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal telomere tethering to nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0004974"}


id: FYPO:0005715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which activation of an inactive protein kinase activity begins later than normal during mitosis.","definition_xrefs":["PomBase:mah","PMID:8978687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed activation of protein kinase activity during mitosis","synonyms":[{"name":"delayed activation of protein kinase activity during M phase of mitotic cell cycle","type":"related"},{"name":"delayed activation of protein kinase activity during mitosis during vegetative growth","type":"exact"},{"name":"delayed activation of protein kinase activity during mitotic M phase","type":"related"},{"name":"delayed activation of protein kinase activity during mitotic M-phase","type":"related"},{"name":"delayed onset of activation of protein kinase activity during mitosis","type":"exact"}],"termid":"FYPO:0005715"}


id: MONDO:0005160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ruptured aneurysm located in the wall of the proximal portion of the descending aorta proceeding from the arch of the aorta.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm","secondary_identifiers":["DOID:3627","HP:0004942","ICD9:441.6","MEDGEN:362","UMLS:C0003486","NANDO:2100101","MESH:D001014","ICD9:441.5","SCTID:73067008","ICD9:441.3","NANDO:2200294","EFO:0001666","ICD9:441.1"],"synonyms":[{"name":"abdominal aortic aneurysm, ruptured","type":"exact"},{"name":"aortic aneurysm","type":"exact"},{"name":"aortic aneurysm (disease)","type":"exact"},{"name":"aortic aneurysm of unspecified site, ruptured","type":"exact"},{"name":"ruptured abdominal aortic aneurysm","type":"exact"},{"name":"ruptured aortic aneurysm","type":"exact"},{"name":"ruptured thoracic aneurysm","type":"exact"},{"name":"ruptured thoracic aortic aneurysm","type":"exact"},{"name":"ruptured thoracoabdominal aortic aneurysm","type":"exact"},{"name":"thoracic aortic aneurysm which HAS ruptured","type":"exact"},{"name":"thoracic aortic aneurysm, ruptured","type":"exact"},{"name":"thoracoabdominal aortic aneurysm, ruptured","type":"exact"}],"termid":"MONDO:0005160","xrefs":{"Monarch":{"xref_id":"0005160"}}}


id: PBO:0052295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 4, pre-mRNA splicing factor","termid":"PBO:0052295"}


id: MOD:00824
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to dehydroalanine.","definition_xrefs":["PubMed:6838602","PubMed:1547888","PubMed:8239649","PubMed:2914619","Unimod:400","PubMed:10220322","PubMed:7947813","PubMed:1815586","RESID:AA0181#TYR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Tyr)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla(Tyr)","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:00824"}


id: SO:0000438
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000438 gene_not_polyadenylated (obsolete SO:0000438)","termid":"SO:0000438"}


id: MONDO:0021918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arena syndrome","secondary_identifiers":["UMLS:C2931491","MESH:C537428","MEDGEN:444068"],"synonyms":[{"name":"spastic paraplegia with iron deposits in basal ganglia","type":"related"}],"termid":"MONDO:0021918","xrefs":{"Monarch":{"xref_id":"0021918"}}}


id: MONDO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lactic acidosis","termid":"MONDO:0006040"},{"relation_name":"is_a","term_name":"acidosis disorder","termid":"MONDO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"metabolic acidosis","secondary_identifiers":["UMLS:C0220981","MEDGEN:65117","DOID:0050758","SCTID:59455009"],"termid":"MONDO:0000440","xrefs":{"Monarch":{"xref_id":"0000440"}}}


id: MONDO:1011104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal agenesis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal agenesis, non-human animal","termid":"MONDO:1010272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal agenesis, rabbit","secondary_identifiers":["OMIA:002007-9986"],"termid":"MONDO:1011104","xrefs":{"Monarch":{"xref_id":"1011104"}}}


id: MONDO:0011517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertension due to gain-of-function mutations in the mineralocorticoid receptor is a rare genetic hypertension characterized by a familial severe hypertension with an onset before age 20 years, associated with suppressed plasma renin and low aldosterone levels in the presence of low or normal levels of the mineralocorticoid aldosterone, that is highly resistant to antihypertensive medication. During pregnancy, there is a marked exacerbation of hypertension, accompanied by low serum potassium levels and undetectable aldosterone levels, but without signs of preeclampsia, requiring early delivery.","definition_xrefs":["Orphanet:88660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudohyperaldosteronism type 2","secondary_identifiers":["icd11.foundation:538048714","GARD:19093","MEDGEN:343170","SCTID:766937004","UMLS:C1854631","MESH:C565359","OMIM:605115"],"synonyms":[{"name":"early-onset hypertension with exacerbation in pregnancy","type":"exact"},{"name":"hypertension due to gain-of-function mutations in the mineralocorticoid receptor","type":"exact"},{"name":"hypertension, early-onset, autosomal dominant, with Severe exacerbation in pregnancy","type":"related"},{"name":"hypertension, early-onset, autosomal dominant, with exacerbation in pregnancy","type":"exact"},{"name":"hypertension, early-onset, autosomal dominant, with severe exacerbation in pregnancy","type":"related"}],"termid":"MONDO:0011517","xrefs":{"Monarch":{"xref_id":"0011517"}}}


id: PBO:0069509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 777, pseudogene","termid":"PBO:0069509"}


id: GO:0120330
data:
  {"annotated_genes":["SJAG_04062","SJAG_04252","SJAG_01056","SJAG_03789","SJAG_03496","SJAG_01581"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72038,78986,104431,117482,118496,118858],"is_not":false,"summary":null,"term":"GO:0120330"}]},"cv_name":"cellular_component","definition":"A conserved RNA endonuclease complex required for spreading and epigenetic inheritance of heterochromatin. The rixosome contains six unique subunits: three structural subunits (Crb3, Rix1, and Ipi1) which form the core of the complex, and three catalytic subunits (the endonuclease Las1, the polynucleotide kinase Grc3, and the AAA-type ATPase Mdn1), which are involved in the processing of ribosomal RNA precursors. All subunits are essential for viability and are conserved from yeast to mammals, including humans.","definition_xrefs":["PMID:35355014","PMID:32491985","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01056":null,"SJAG_01581":null,"SJAG_03496":null,"SJAG_03789":null,"SJAG_04062":null,"SJAG_04252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"rixosome complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rix1 complex","type":"narrow"}],"termid":"GO:0120330","terms_by_termid":{"GO:0120330":null}}


id: MONDO:0013570
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86323],"is_not":false,"summary":null,"term":"MONDO:0013570"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 8 is a mitochondrial disease due to a defect in mitochondrial protein synthesis resulting in deficiency of respiratory chain complexes I, III and IV in the cardiac and skeletal muscle and brain characterized by severe hypertrophic cardiomyopathy, pulmonary hypoplasia, generalized muscle weakness and neurological involvement.","definition_xrefs":["Orphanet:319504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111479","GARD:17452","UMLS:C4518839","MEDGEN:1377817","OMIM:614096","SCTID:733600007"],"synonyms":[{"name":"AARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"COXPD8","type":"exact"},{"name":"cardiomyopathy, hypertrophic mitochondrial, fatal infantile","type":"related"},{"name":"combined oxidative phosphorylation deficiency 8","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in AARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 8","type":"exact"}],"termid":"MONDO:0013570","terms_by_termid":{"MONDO:0013570":null},"xrefs":{"Monarch":{"xref_id":"0013570"}}}


id: PBO:0029390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029390"}


id: PBO:0113030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis; H3-H4 histone chaperone, downstream of Pol32p, involved in the transfer of parental histones to the lagging strand during DNA replication","termid":"PBO:0113030"}


id: PBO:0069955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1248, pseudogene","termid":"PBO:0069955"}


id: PBO:0061644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 2","termid":"PBO:0061644"}


id: FYPO:0001590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during vegetative growth","termid":"FYPO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased lysine import during vegetative growth","synonyms":[{"name":"decreased L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-lysine import during vegetative growth","type":"exact"},{"name":"decreased lysine import during mitotic cell cycle","type":"related"},{"name":"decreased lysine import into cell during vegetative growth","type":"exact"},{"name":"decreased lysine uptake during vegetative growth","type":"exact"},{"name":"reduced lysine import during vegetative growth","type":"exact"}],"termid":"FYPO:0001590"}


id: PBO:0056568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 3","termid":"PBO:0056568"}


id: GO:0019624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into isopropylamine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrazine catabolic process","termid":"GO:0019381"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process to isopropylamine","synonyms":[{"name":"atrazine breakdown to isopropylamine","type":"exact"},{"name":"atrazine degradation to isopropylamine","type":"exact"}],"termid":"GO:0019624"}


id: MONDO:0012870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2q31.2 deletion syndrome","secondary_identifiers":["OMIM:612345","UMLS:C2676724","MEDGEN:394109","DOID:0060416","MESH:C567344"],"synonyms":[{"name":"chromosome 2q31.2 deletion syndrome","type":"exact"}],"termid":"MONDO:0012870","xrefs":{"Monarch":{"xref_id":"0012870"}}}


id: FYPO:0004017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"},{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0000654","FYPO:0002114","FYPO:0000257"],"is_obsolete":false,"name":"normal cytochrome-c oxidase activity","termid":"FYPO:0004017"}


id: PBO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 43","termid":"PBO:0042760"}


id: _global:participates_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a continuant and a process, in which the continuant is somehow involved in the process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in","secondary_identifiers":["RO:0000056"],"termid":"_global:participates_in"}


id: PBO:0048539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEN1 Holliday junction 5' flap endonuclease","termid":"PBO:0048539"}


id: MONDO:0006325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from the structures of the eye or ocular adnexa.","definition_xrefs":["NCIT:C8562"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"ocular melanoma","secondary_identifiers":["EFO:1000403","DOID:1752","MEDGEN:107846","UMLS:C0558356","ONCOTREE:OM"],"synonyms":[{"name":"OM","type":"related"},{"name":"eye melanoma","type":"exact"},{"name":"eye melanoma (disease)","type":"exact"},{"name":"eyeball of camera-type eye melanoma","type":"exact"},{"name":"eyeball of camera-type eye melanoma (disease)","type":"exact"},{"name":"melanoma (disease) of eyeball of camera-type eye","type":"exact"},{"name":"melanoma of eye","type":"exact"},{"name":"melanoma of the eye","type":"exact"},{"name":"ocular melanoma","type":"exact"}],"termid":"MONDO:0006325","xrefs":{"Monarch":{"xref_id":"0006325"}}}


id: MONDO:0009511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen-like syndrome, B3GAT3 type is a rare, genetic, primary bone dysplasia characterized by laxity, dislocations and contractures of the joints, short stature, foot deformities (e.g. clubfeet), broad tips of fingers and toes, short neck, dysmorphic facial features (hypertelorism, downslanting palpebral fissures, upturned nose with anteverted nares, high arched palate) and various cardiac malformations. Severe disease is associated with multiple fractures, osteopenia, arachnodactyly and blue sclerae. A broad spectrum of additional features, including scoliosis, radio-ulnar synostosis, mild developmental delay, and various eye disorders (glaucoma, amblyopia, hyperopia, astigmatism, ptosis), are also reported.","definition_xrefs":["Orphanet:284139"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005267"],"is_obsolete":false,"name":"Larsen-like syndrome, B3GAT3 type","secondary_identifiers":["MEDGEN:480034","OMIM:245600","MESH:C537874","UMLS:C3278404","DOID:0080575","GARD:17308"],"synonyms":[{"name":"JDSCD","type":"related"},{"name":"Larsen syndrome, autosomal recessive","type":"related"},{"name":"Larsen syndrome, autosomal recessive, formerly","type":"related"},{"name":"multiple JOINT dislocations, short stature, and craniofacial dysmorphism with or without congenital heart defects","type":"related"},{"name":"multiple JOINT dislocations, short stature, craniofacial dysmorphism, and congenital heart defects","type":"related"},{"name":"multiple Joint dislocations, short stature, and craniofacial Dysmorphism with or without congenital heart defects","type":"related"},{"name":"multiple joint dislocations, short stature, craniofacial dysmorphism, with or without congenital heart defects","type":"exact"},{"name":"multiple joint dislocations-short stature-craniofacial dysmorphism-congenital heart defects syndrome","type":"exact"}],"termid":"MONDO:0009511","xrefs":{"Monarch":{"xref_id":"0009511"}}}


id: FYPO:0001856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during iron starvation","synonyms":[{"name":"normal transcription during iron depletion","type":"exact"},{"name":"normal transcription during iron deprivation","type":"exact"},{"name":"normal transcription during iron ion starvation","type":"exact"},{"name":"normal transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal transcription during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001856"}


id: PBO:0110485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 21","termid":"PBO:0110485"}


id: PBO:0077274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM14B divergent transcript","termid":"PBO:0077274"}


id: MONDO:0859205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed puberty, self-limited","secondary_identifiers":["UMLS:C2874202","MEDGEN:1789612","OMIM:619613"],"termid":"MONDO:0859205","xrefs":{"Monarch":{"xref_id":"0859205"}}}


id: PBO:0072520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 49","termid":"PBO:0072520"}


id: GO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + O2 = acetate + CO2 + H2O.","definition_xrefs":["EC:1.13.12.4","RHEA:16513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00319","MetaCyc:RXN-19631"],"synonyms":[{"name":"(S)-lactate:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"L-lactate monooxygenase activity","type":"related"},{"name":"L-lactate-2-monooxygenase activity","type":"related"},{"name":"lactate monooxygenase activity","type":"related"},{"name":"lactate oxidase activity","type":"related"},{"name":"lactate oxidative decarboxylase activity","type":"related"},{"name":"lactate oxygenase activity","type":"related"},{"name":"lactic oxidase activity","type":"related"},{"name":"lactic oxygenase activity","type":"related"}],"termid":"GO:0050040"}


id: PBO:0036336
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by mouse DLP1","termid":"PBO:0036336"}


id: GO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylceramide metabolic process","termid":"GO:0006678"},{"relation_name":"is_a","term_name":"glycosylceramide biosynthetic process","termid":"GO:0046476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucosylceramide biosynthetic process","synonyms":[{"name":"glucosylceramide anabolism","type":"exact"},{"name":"glucosylceramide biosynthesis","type":"exact"},{"name":"glucosylceramide formation","type":"exact"},{"name":"glucosylceramide synthesis","type":"exact"}],"termid":"GO:0006679"}


id: PBO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Duo1","termid":"PBO:0004210"}


id: GO:1902616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which O-acyl-L-carnitine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"O-acyl-L-carnitine transmembrane transport","synonyms":[{"name":"O-acylcarnitine transmembrane transport","type":"exact"}],"termid":"GO:1902616"}


id: MONDO:0002830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovary transitional cell carcinoma (obsolete MONDO:0002830)","termid":"MONDO:0002830","xrefs":{"Monarch":{"xref_id":"0002830"}}}


id: GO:0042695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The beginning of development of the breasts in the female.","definition_xrefs":["GOC:curators","PMID:19117864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of secondary female sexual characteristics","termid":"GO:0046543"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thelarche","secondary_identifiers":["Wikipedia:Thelarche"],"termid":"GO:0042695"}


id: PR:O94335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02425","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.02","secondary_identifiers":["UniProtKB:O94335"],"synonyms":[{"name":"Spom972h-STT3B","type":"exact"},{"name":"oligosaccharyl transferase subunit stt3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94335"}


id: GO:0061975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20679519","PMID:20097540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"articular cartilage development","synonyms":[{"name":"articular cartilage of joint development","type":"exact"}],"termid":"GO:0061975"}


id: PBO:0071917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 2","termid":"PBO:0071917"}


id: GO:1903039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GOC:rl","GOC:BHF","GO_REF:0000058","GOC:TermGenie","PMID:21106532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"positively_regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"activation of leukocyte adhesion","type":"narrow"},{"name":"activation of leukocyte cell adhesion","type":"narrow"},{"name":"activation of leukocyte cell-cell adhesion","type":"narrow"},{"name":"positive regulation of leukocyte adhesion","type":"exact"},{"name":"positive regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte adhesion","type":"exact"},{"name":"up regulation of leukocyte cell adhesion","type":"exact"},{"name":"up regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell adhesion","type":"exact"},{"name":"up-regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"upregulation of leukocyte adhesion","type":"exact"},{"name":"upregulation of leukocyte cell adhesion","type":"exact"},{"name":"upregulation of leukocyte cell-cell adhesion","type":"exact"}],"termid":"GO:1903039"}


id: PBO:0029713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phenotype","termid":"PBO:0029713"}


id: GO:0001820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesized in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells.","definition_xrefs":["ISBN:0198506732","ISBN:0781735149","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"serotonin secretion","synonyms":[{"name":"5-HT secretion","type":"exact"},{"name":"5-hydroxytryptamine secretion","type":"exact"},{"name":"serotonin release","type":"related"}],"termid":"GO:0001820"}


id: FYPO:0007372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of chlorpromazine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to chlorpromazine","synonyms":[{"name":"resistance to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"resistance to chlorpromazine during vegetative growth","type":"exact"},{"name":"resistant to chlorpromazine","type":"exact"}],"termid":"FYPO:0007372"}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: PBO:0089983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Sep1","termid":"PBO:0089983"}


id: GO:0033395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 3-hydroxypropionate.","definition_xrefs":["MetaCyc:PWY-3941","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine biosynthetic process","termid":"GO:0019483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"beta-alanine biosynthetic process via 3-hydroxypropionate","synonyms":[{"name":"beta-alanine anabolism via 3-hydroxypropionate","type":"exact"},{"name":"beta-alanine biosynthesis via 3-hydroxypropionate","type":"exact"},{"name":"beta-alanine formation via 3-hydroxypropionate","type":"exact"},{"name":"beta-alanine synthesis via 3-hydroxypropionate","type":"exact"}],"termid":"GO:0033395"}


id: GO:0097375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal sensory neuron is a sensory neuron that project to the spinal cord.","definition_xrefs":["GOC:pr","CL:0009000","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal sensory neuron axon guidance","termid":"GO:0097375"}


id: PBO:0053047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4 pseudogene","termid":"PBO:0053047"}


id: GO:0040007
data:
  {"annotated_genes":["SJAG_04509","SJAG_00216","SJAG_03486","SJAG_03602","SJAG_04322","SJAG_04312","SJAG_00993","SJAG_01181","SJAG_02723","SJAG_00244","SJAG_01456","SJAG_04724","SJAG_02838","SJAG_00124","SJAG_00514","SJAG_02392","SJAG_01017","SJAG_03705","SJAG_03581","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96180,94913,90204],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[94357,88234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[88397,100065,103806,116780,118204,107172,111072],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[74744,76491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030447"},{"annotations":[119696,119697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030448"},{"annotations":[91064],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[106972],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0030307"},{"annotations":[115351],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[98758],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"The increase in size or mass of an entire organism, a part of an organism or a cell.","definition_xrefs":["GOC:bf","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01181":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04312":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:34427722":null},"secondary_identifiers":["GO:0048590"],"synonyms":[{"name":"growth pattern","type":"related"},{"name":"non-developmental growth","type":"related"}],"termid":"GO:0040007","terms_by_termid":{"GO:0030307":null,"GO:0030447":null,"GO:0030448":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: MONDO:0033948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired angioedema","termid":"MONDO:0019624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired angioedema with C1Inh deficiency","secondary_identifiers":["GARD:22196","Orphanet:528663","MEDGEN:1846342","UMLS:C5848086"],"termid":"MONDO:0033948","xrefs":{"Monarch":{"xref_id":"0033948"}}}


id: GO:0016106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpenoid biosynthetic process","synonyms":[{"name":"sesquiterpenoid anabolism","type":"exact"},{"name":"sesquiterpenoid biosynthesis","type":"exact"},{"name":"sesquiterpenoid formation","type":"exact"},{"name":"sesquiterpenoid synthesis","type":"exact"}],"termid":"GO:0016106"}


id: PBO:0089982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, meiosis specific","termid":"PBO:0089982"}


id: PATO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000075 threshability (obsolete PATO:0000075)","termid":"PATO:0000075"}


id: GO:0050450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA, where the acetyl group is added to the re-face of oxaloacetate; acetyl-CoA provides the two carbon atoms of the pro-R carboxymethyl group.","definition_xrefs":["PMID:17400742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate synthase activity","termid":"GO:0036440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"citrate (Re)-synthase activity","secondary_identifiers":["EC:2.3.3.3"],"synonyms":[{"name":"(R)-citrate synthase activity","type":"related"},{"name":"Re-citrate-synthase activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [thioester-hydrolysing, (pro-R)-carboxymethyl-forming]","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3R)-CH(2)COO(-)->acetyl-CoA) activity","type":"related"},{"name":"citrate oxaloacetate-lyase [(pro-3R)-CH2COO-rightacetyl-CoA]","type":"related"}],"termid":"GO:0050450"}


id: MONDO:0020274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete onycho-patellar syndrome with eye involvement (obsolete MONDO:0020274)","secondary_identifiers":["Orphanet:98704"],"termid":"MONDO:0020274","xrefs":{"Monarch":{"xref_id":"0020274"}}}


id: GO:0016872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The catalysis of certain rearrangements of a molecule to break or form a ring.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular lyase activity","secondary_identifiers":["EC:5.5.1.-"],"termid":"GO:0016872"}


id: PBO:0053409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 345","termid":"PBO:0053409"}


id: PBO:0077438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 171","termid":"PBO:0077438"}


id: PBO:0054063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1410","termid":"PBO:0054063"}


id: PBO:0080583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 6","termid":"PBO:0080583"}


id: MONDO:0013067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the FOXE3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 34 multiple types","secondary_identifiers":["OMIM:612968","MEDGEN:442822","MESH:C567835","UMLS:C2751822","DOID:0110230","GARD:15599"],"synonyms":[{"name":"CATC3","type":"exact"},{"name":"CTRCT34","type":"exact"},{"name":"FOXE3 cataract (disease)","type":"exact"},{"name":"autosomal recessive congenital cataract 3","type":"exact"},{"name":"cataract (disease) caused by mutation in FOXE3","type":"exact"},{"name":"cataract 34 multiple types with or without microcornea","type":"exact"},{"name":"cataract 34, multiple types","type":"related"},{"name":"cataract 34, multiple types, with or without microcornea","type":"related"},{"name":"cataract, autosomal recessive congenital 3","type":"related"}],"termid":"MONDO:0013067","xrefs":{"Monarch":{"xref_id":"0013067"}}}


id: PBO:0074985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-27","termid":"PBO:0074985"}


id: PBO:0028420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ubiquinone_binding","termid":"PBO:0028420"}


id: PBO:0016988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase involved in vesicle-mediated transport See1 (predicted)","termid":"PBO:0016988"}


id: PBO:0053332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 165","termid":"PBO:0053332"}


id: PBO:0083493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YIP3/YNL044W","termid":"PBO:0083493"}


id: GO:0044432
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete endoplasmic reticulum part (obsolete GO:0044432)","synonyms":[{"name":"ER component","type":"exact"}],"termid":"GO:0044432"}


id: MONDO:0007885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hip region disease that is characterized by uni- or bilateral avascular necrosis (AVN) of the femoral head in children. In a small percentage of cases, mutations in the COL2A1 gene were found to be responsible.","definition_xrefs":["GARD:0006874","Orphanet:2380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 2 collagen-related bone disorder (obsolete MONDO:0019686)","termid":"MONDO:0019686"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calve-Perthes disease","secondary_identifiers":["NORD:1353","MEDGEN:730669","GARD:6874","DOID:14415","UMLS:C1442965","MedDRA:10034735","MESH:D007873","SCTID:15739006","NCIT:C34766","OMIM:150600"],"synonyms":[{"name":"Calve - Perthes' disease","type":"exact"},{"name":"LCPD","type":"related"},{"name":"Lcp","type":"related"},{"name":"Legg Calvé Perthes Disease","type":"exact"},{"name":"Legg-CALVE-Perthes disease","type":"exact"},{"name":"Legg-Calve-Perthes disease","type":"exact"},{"name":"Legg-Calve-Perthes symptom","type":"exact"},{"name":"Legg-Calve-Perthes syndrome","type":"exact"},{"name":"Legg-Calvé-Perthes disease","type":"exact"},{"name":"Legg-Perthes disease","type":"exact"},{"name":"Osteochondrosis of the capital femoral epiphysis","type":"exact"},{"name":"Perthe's disease","type":"exact"},{"name":"Perthes disease","type":"exact"},{"name":"Pseudocoxalgia","type":"exact"},{"name":"aseptic necrosis of the capital femoral epiphysis","type":"exact"},{"name":"coxa plana","type":"exact"},{"name":"juvenile osteochond-hip/pelvis","type":"exact"},{"name":"juvenile osteochondrosis of hip and pelvis","type":"exact"},{"name":"juvenile osteochondrosis of hip and/or pelvis","type":"exact"},{"name":"osteochondritis deformans","type":"related"},{"name":"osteochondritis of the capital femoral epiphysis","type":"exact"},{"name":"osteochondrosis of Legg-Calve-Perthes","type":"exact"},{"name":"pseudocoxalgia","type":"exact"}],"termid":"MONDO:0007885","xrefs":{"Monarch":{"xref_id":"0007885"}}}


id: PBO:0065639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 14","termid":"PBO:0065639"}


id: MONDO:0009332
data:
  {"annotated_genes":["SJAG_03889","SJAG_02297","SJAG_02556","SJAG_04509","SJAG_02208","SJAG_01732","SJAG_01798","SJAG_00930","SJAG_02539","SJAG_01960","SJAG_05180","SJAG_01852","SJAG_03153","SJAG_02339","SJAG_02453","SJAG_02330","SJAG_00319","SJAG_00088","SJAG_02708","SJAG_01410","SJAG_01759","SJAG_03684","SJAG_03089","SJAG_03115","SJAG_00839","SJAG_02796","SJAG_04473","SJAG_00611"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85811,85812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[85855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[85391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[86672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[87096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[85379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[87355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[87352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[85566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[86258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[87245,87244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[87596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[86590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[86449,86450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[87043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[87137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[86061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[87438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"},{"annotations":[86982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A disorder of the blood that is present at birth.","definition_xrefs":["NCIT:C104003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_00611":null,"SJAG_00839":null,"SJAG_00930":null,"SJAG_01410":null,"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_01852":null,"SJAG_01960":null,"SJAG_02208":null,"SJAG_02297":null,"SJAG_02330":null,"SJAG_02339":null,"SJAG_02453":null,"SJAG_02539":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02796":null,"SJAG_03089":null,"SJAG_03115":null,"SJAG_03153":null,"SJAG_03684":null,"SJAG_03889":null,"SJAG_04473":null,"SJAG_04509":null,"SJAG_05180":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital hematological disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3267032","MEDGEN:760584"],"synonyms":[{"name":"congenital haematological system disease","type":"exact"},{"name":"congenital hematological disorder","type":"exact"},{"name":"congenital hematological system disease","type":"exact"}],"termid":"MONDO:0009332","terms_by_termid":{"MONDO:0007109":null,"MONDO:0009134":null,"MONDO:0009950":null,"MONDO:0009953":null,"MONDO:0010121":null,"MONDO:0010294":null,"MONDO:0010480":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012465":null,"MONDO:0012559":null,"MONDO:0013248":null,"MONDO:0013275":null,"MONDO:0013307":null,"MONDO:0013499":null,"MONDO:0014108":null,"MONDO:0014118":null,"MONDO:0014757":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0024553":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0009332"}}}


id: GO:0019654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of acetate, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl","MetaCyc:P142-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"acetate fermentation","termid":"GO:0019654"}


id: SO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding arginyl tRNA (SO:0000255).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine_tRNA_primary_transcript","synonyms":[{"name":"arginine tRNA primary transcript","type":"exact"}],"termid":"SO:0000212"}


id: MONDO:0010293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"ectodermal dysplasia and immune deficiency","secondary_identifiers":["GARD:9936","NANDO:1200360","DOID:0081077","UMLS:C1846006","NCIT:C118844","SCTID:703525006","MESH:C536181","NANDO:2200761","MEDGEN:375786","Orphanet:98813","OMIMPS:300291"],"synonyms":[{"name":"EDA-ID","type":"exact"},{"name":"HED-ID","type":"exact"},{"name":"Xhm-Ed","type":"related"},{"name":"anhidrotic ectodermal dysplasia with immune deficiency","type":"exact"},{"name":"anhidrotic ectodermal dysplasia with immunodeficiency","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic, with immune deficiency","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, with immune deficiency","type":"related"},{"name":"hyper-IgM immunodeficiency, X-linked, with hypohidrotic ectodermal dysplasia","type":"related"},{"name":"hypohidrotic ectodermal dysplasia with immune deficiency","type":"exact"},{"name":"hypohidrotic ectodermal dysplasia with immunodeficiency","type":"exact"}],"termid":"MONDO:0010293","xrefs":{"Monarch":{"xref_id":"0010293"}}}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["PMID:18390555","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: GO:0036130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H2 + NADPH + H+ -> prostaglandin F2alpha + NADP+. This reaction is the reduction of prostaglandin H2 ((5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoate) to prostaglandin F2alpha ((5Z,13E)-(15S)-9alpha,11alpha,15-Trihydroxyprosta-5,13-dienoate).","definition_xrefs":["PMID:10622721","GOC:mw","PMID:16475787","PMID:14979715","KEGG_REACTION:R02264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"prostaglandin H2 endoperoxidase reductase activity","secondary_identifiers":["RHEA:45312","Reactome:R-HSA-2161549"],"synonyms":[{"name":"PGH2 9,11-endoperoxidase","type":"exact"},{"name":"PGH2 9-,11-endoperoxide reductase","type":"exact"}],"termid":"GO:0036130"}


id: PATO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; egg-shaped.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"oblong","termid":"PATO:0000946"},{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovate","synonyms":[{"name":"eccentric","type":"related"},{"name":"egg-shaped","type":"exact"},{"name":"oval","type":"exact"},{"name":"ovoid","type":"exact"}],"termid":"PATO:0001891"}


id: MONDO:0012821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 5","secondary_identifiers":["OMIM:612230","UMLS:C2677122","MEDGEN:393664"],"synonyms":[{"name":"CRCS5","type":"exact"},{"name":"colorectal cancer, susceptibility to, 5","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 10","type":"related"}],"termid":"MONDO:0012821","xrefs":{"Monarch":{"xref_id":"0012821"}}}


id: MONDO:0014423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) due to DNA-PKcs deficiency is an extremely rare type of SCID characterized by the classical signs of SCID (severe and recurrent infections, diarrhea, failure to thrive), absence of T and B lymphocytes, and cell sensitivity to ionizing radiation.","definition_xrefs":["Orphanet:317425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to DNA-PKcs deficiency","secondary_identifiers":["UMLS:C4014833","GARD:17441","SCTID:716871006","DOID:0111961","MEDGEN:863270","OMIM:615966"],"synonyms":[{"name":"IMD26","type":"related"},{"name":"SCID due to DNA-PKcs deficiency","type":"exact"},{"name":"immunodeficiency 26 with or without neurologic abnormalities","type":"related"},{"name":"immunodeficiency 26, with or without neurologic abnormalities","type":"exact"}],"termid":"MONDO:0014423","xrefs":{"Monarch":{"xref_id":"0014423"}}}


id: FYPO:0007035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing 5-fluorouracil.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on 5-fluorouracil","synonyms":[{"name":"normal cell population growth in presence of 5-fluorouracil","type":"exact"},{"name":"normal cell population growth on 5-FU","type":"exact"},{"name":"normal cell population growth on 5-fluorouracil","type":"exact"},{"name":"normal vegetative cell population growth on 5-fluorouracil","type":"exact"}],"termid":"FYPO:0007035"}


id: GO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting.","definition_xrefs":["GOC:lm","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"negative regulation of axonogenesis","termid":"GO:0050771"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting","synonyms":[{"name":"down regulation of collateral sprouting","type":"exact"},{"name":"down-regulation of collateral sprouting","type":"exact"},{"name":"downregulation of collateral sprouting","type":"exact"},{"name":"inhibition of collateral sprouting","type":"narrow"}],"termid":"GO:0048671"}


id: GO:0106138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Sec61 translocon complex.","definition_xrefs":["GOC:pga","PMID:9792704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Sec61 translocon complex binding","termid":"GO:0106138"}


id: GO:0045568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045568)","synonyms":[{"name":"activation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 2 biosynthetic process","type":"exact"}],"termid":"GO:0045568"}


id: GO:0120042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage proliferation.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of macrophage proliferation","termid":"GO:0120040"},{"relation_name":"negatively_regulates","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage proliferation","termid":"GO:0120042"}


id: FYPO:0004566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to caffeine during the second meiotic nuclear division. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to caffeine during meiosis II","synonyms":[{"name":"hypersensitive to caffeine during meiosis II","type":"exact"},{"name":"sensitive to caffeine during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004566"}


id: PBO:0035993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0035993"}


id: MONDO:0021209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the heart.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart neoplasm","secondary_identifiers":["NCIT:C3081","MEDGEN:9172","NANDO:2200236","EFO:1001339","NANDO:2100061","UMLS:C0018809"],"synonyms":[{"name":"Cardiac neoplasm","type":"exact"},{"name":"Cardiac neoplasms","type":"exact"},{"name":"Cardiac tumor","type":"exact"},{"name":"Cardiac tumour","type":"exact"},{"name":"Intracavitary tumors","type":"related"},{"name":"Intracavitary tumours","type":"related"},{"name":"heart neoplasm (disease)","type":"exact"},{"name":"heart tumor","type":"exact"},{"name":"heart tumour","type":"exact"},{"name":"myocardial tumors (rhabdomyomas and fibromas)","type":"related"},{"name":"myocardial tumours (rhabdomyomas and fibromas)","type":"related"},{"name":"neoplasm of heart","type":"exact"},{"name":"neoplasm of the heart","type":"exact"},{"name":"primary cardiac tumors, childhood","type":"related"},{"name":"tumor of heart","type":"exact"},{"name":"tumor of the heart","type":"exact"},{"name":"tumour of heart","type":"exact"},{"name":"tumour of the heart","type":"exact"}],"termid":"MONDO:0021209","xrefs":{"Monarch":{"xref_id":"0021209"}}}


id: GO:1902753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["GOC:hjd","GO_REF:0000058","GOC:TermGenie","PMID:1526373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal amino acid absorption","termid":"GO:1902752"},{"relation_name":"negatively_regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal amino acid absorption","synonyms":[{"name":"down regulation of renal amino acid absorption","type":"exact"},{"name":"down-regulation of renal amino acid absorption","type":"exact"},{"name":"downregulation of renal amino acid absorption","type":"exact"},{"name":"inhibition of renal amino acid absorption","type":"narrow"}],"termid":"GO:1902753"}


id: MONDO:1012429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dysplasia and internal hydrocephalus, non-human animal","termid":"MONDO:1011887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and internal hydrocephalus, cattle","secondary_identifiers":["OMIA:001663-9913"],"termid":"MONDO:1012429","xrefs":{"Monarch":{"xref_id":"1012429"}}}


id: GO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcolemma","termid":"GO:0042383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"T-tubule","secondary_identifiers":["Wikipedia:T-tubule"],"synonyms":[{"name":"transverse tubule","type":"exact"},{"name":"triad","type":"related"}],"termid":"GO:0030315"}


id: PBO:0091459
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3197528_3197529insG","termid":"PBO:0091459"}


id: GO:1901149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to salicylic acid.","definition_xrefs":["GOC:TermGenie","PMID:22699612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"salicylic acid binding","synonyms":[{"name":"salicylic acid receptor","type":"narrow"}],"termid":"GO:1901149"}


id: PBO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 6","termid":"PBO:0060484"}


id: MONDO:0013070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 7","secondary_identifiers":["OMIM:612997","MESH:C567832","UMLS:C2751811","MEDGEN:414478","DOID:0070173","GARD:18400"],"synonyms":[{"name":"Male infertility, nonsyndromic, autosomal recessive","type":"related"},{"name":"SPGF7","type":"related"},{"name":"spermatogenic failure 7","type":"exact"},{"name":"spermatogenic failure type 7","type":"exact"}],"termid":"MONDO:0013070","xrefs":{"Monarch":{"xref_id":"0013070"}}}


id: CHEBI:45979
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiabendazole","termid":"CHEBI:45979"}


id: PR:Q92365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3601 gene.","definition_xrefs":["UniProtKB:Q92365","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.05","synonyms":[{"name":"Spom972h-rpl3601","type":"exact"}],"termid":"PR:Q92365"}


id: PBO:0002596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rhp41","termid":"PBO:0002596"}


id: SO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase III binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter","synonyms":[{"name":"RNA polymerase C promoter","type":"exact"},{"name":"RNApol III promoter","type":"exact"},{"name":"pol III promoter","type":"exact"},{"name":"polymerase III promoter","type":"exact"}],"termid":"SO:0000171"}


id: PBO:0069085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 332, pseudogene","termid":"PBO:0069085"}


id: PBO:0047179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 199, Y-linked, pseudogene","termid":"PBO:0047179"}


id: PBO:0014592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor Sre2","termid":"PBO:0014592"}


id: MONDO:0012491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waldenstrom macroglobulinemia","termid":"MONDO:0100280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"macroglobulinemia, Waldenstrom, 2","secondary_identifiers":["OMIM:610430","UMLS:C1864876","MEDGEN:355856","GARD:15486"],"synonyms":[{"name":"WM2","type":"exact"},{"name":"macroglobulinemia, WALDENSTROM, susceptibility to, 2","type":"related"}],"termid":"MONDO:0012491","xrefs":{"Monarch":{"xref_id":"0012491"}}}


id: PBO:0063451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 9A","termid":"PBO:0063451"}


id: PBO:0027262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_single_large_spore","termid":"PBO:0027262"}


id: GO:0051006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of triglyceride lipase activity","termid":"GO:0061365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein lipase activity","synonyms":[{"name":"activation of lipoprotein lipase activity","type":"narrow"},{"name":"stimulation of lipoprotein lipase activity","type":"narrow"},{"name":"up regulation of lipoprotein lipase activity","type":"exact"},{"name":"up-regulation of lipoprotein lipase activity","type":"exact"},{"name":"upregulation of lipoprotein lipase activity","type":"exact"}],"termid":"GO:0051006"}


id: MONDO:0700192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatoma that occurs in a chicken.","definition_xrefs":["NCIT:C134558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken hepatoma","termid":"MONDO:0700192","xrefs":{"Monarch":{"xref_id":"0700192"}}}


id: PBO:0005368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Psy1","termid":"PBO:0005368"}


id: PBO:0050864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ID2 antisense RNA 1","termid":"PBO:0050864"}


id: GO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TMP metabolic process","termid":"GO:0046044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"TMP catabolic process","synonyms":[{"name":"TMP breakdown","type":"exact"},{"name":"TMP catabolism","type":"exact"},{"name":"TMP degradation","type":"exact"}],"termid":"GO:0046045"}


id: RO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"is_symbiosis","termid":"RO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_commensalism","termid":"RO:0002466"}


id: PBO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 7","termid":"PBO:0070508"}


id: PBO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter Cat1","termid":"PBO:0002989"}


id: MONDO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute bacterial disease caused by Neisseria meningitides that presents usually, but not always, with a rash (non blanching petechial or purpuric rash), progressively developing signs of meningitis (fever, vomiting, headache, photophobia, and neck stiffness) and later leading to confusion, delirium and drowsiness. Neck stiffness and photophobia are often absent in infants and young children who may manifest nonspecific signs such as irritability, inconsolable crying, poor feeding, and a bulging fontanel. Meningococcal meningitis may also present as part of early or late onset sepsis in neonates. The disease is potentially fatal. Surviving patients may develop neurological sequelae that include sensorineural hearing loss, seizures, spasticity, attention deficits and intellectual disability.","definition_xrefs":["Orphanet:33475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningococcal infection","termid":"MONDO:0005373"},{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningococcal meningitis","secondary_identifiers":["UMLS:C0025294","ICD10CM:A39.0","DOID:0080176","ICD9:036.0","MedDRA:10027249","SCTID:192644005","GARD:18809","MEDGEN:6299","NORD:1438","ICD10EXP:G01*","ICD10EXP:A39.0+","EFO:1001040","icd11.foundation:516585689","MedDRA:10027276","MESH:D008585"],"termid":"MONDO:0018059","xrefs":{"Monarch":{"xref_id":"0018059"}}}


id: MONDO:0016515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kallmann syndrome with cardiopathy is characterized by hypogonadotropic hypogonadism associated with gonadotropin-releasing hormone (GnRH) deficiency, anosmia or hyposmia (with hypoplasia or aplasia of the olfactory bulbs) and complex congenital cardiac malformations (double-outlet right ventricle, dilated cardiomyopathy, right aortic arch). It represents a distinct clinical entity from Kallmann syndrome.","definition_xrefs":["Orphanet:2326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kallmann syndrome-heart disease syndrome","secondary_identifiers":["MEDGEN:928566","UMLS:C4302897","GARD:18767"],"termid":"MONDO:0016515","xrefs":{"Monarch":{"xref_id":"0016515"}}}


id: PBO:0081332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF132 divergent transcript","termid":"PBO:0081332"}


id: SO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer bound by a factor.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_factor","termid":"SO:0000277"},{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_bound_by_factor","synonyms":[{"name":"enhancer bound by factor","type":"exact"}],"termid":"SO:0000166"}


id: GO:0052641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoic acid + UDP-glucose = benzoic acid glucose ester + UDP.","definition_xrefs":["MetaCyc:RXN-11660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"benzoic acid glucosyltransferase activity","synonyms":[{"name":"UDP:glucose:BA glucosyltransferase activity","type":"exact"},{"name":"UDP:glucose:benzoate glucosyltransferase activity","type":"exact"},{"name":"UDP:glucose:benzoic acid glucosyltransferase activity","type":"exact"},{"name":"benzoate glucosyltransferase activity","type":"exact"}],"termid":"GO:0052641"}


id: PBO:0044015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 delta","termid":"PBO:0044015"}


id: PBO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 5","termid":"PBO:0061044"}


id: GO:0033087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"negatively_regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of immature T cell proliferation","termid":"GO:0033087"}


id: GO:2000159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in heart morphogenesis (obsolete GO:2000159)","termid":"GO:2000159"}


id: GO:0010788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of cis-Golgi to rough ER transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","termid":"GO:0048206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, cis-Golgi to rough ER","termid":"GO:0010788"}


id: GO:0046906
data:
  {"annotated_genes":["SJAG_03929","SJAG_02398","SJAG_02744","SJAG_02794","SJAG_02982","SJAG_05027","SJAG_04823","SJAG_04217","SJAG_03750","SJAG_03249","SJAG_MIT04","SJAG_02646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59068,94972,71320,70762,68055,119333,61676,57491,64909,77174,78669,78405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a tetrapyrrole, a compound containing four pyrrole nuclei variously substituted and linked to each other through carbons at the alpha position.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":12,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tetrapyrrole binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin binding","type":"narrow"}],"termid":"GO:0046906","terms_by_termid":{"GO:0020037":null}}


id: MONDO:0011604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylo-ocular syndrome is a very rare association of spinal and ocular manifestations that is characterized by dense cataracts, and retinal detachment along with generalized osteoporosis and platyspondyly. Mild craniofacial dysphormism has been reported including short neck, large head and prominent eyebrows.","definition_xrefs":["Orphanet:85194"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"},{"relation_name":"is_a","term_name":"linkeropathy","termid":"MONDO:1040022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"spondylo-ocular syndrome","secondary_identifiers":["OMIM:605822","SCTID:715653007","MEDGEN:900371","GARD:16740","icd11.foundation:1611450426","UMLS:C4225412"],"synonyms":[{"name":"SOS","type":"related"},{"name":"spondyloocular syndrome","type":"related"}],"termid":"MONDO:0011604","xrefs":{"Monarch":{"xref_id":"0011604"}}}


id: GO:0034821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citronellol + NAD+ = citronellal + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citronellol dehydrogenase activity (obsolete GO:0034821)","termid":"GO:0034821"}


id: GO:0050686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA processing","synonyms":[{"name":"down regulation of mRNA processing","type":"exact"},{"name":"down-regulation of mRNA processing","type":"exact"},{"name":"downregulation of mRNA processing","type":"exact"},{"name":"inhibition of mRNA processing","type":"narrow"}],"termid":"GO:0050686"}


id: PBO:0076543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taspase 1","termid":"PBO:0076543"}


id: PBO:0070820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 50","termid":"PBO:0070820"}


id: PBO:0084908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitofusin, protein involved in mitochondrial outer membrane fusion; role in mitochondrial genome maintenance; efficient tethering and degradation of Fzo1p requires an intact N-terminal GTPase domain; targeted for destruction by the ubiquitin ligase SCF-Mdm30p and the cytosolic ubiquitin-proteasome system; activity regulated by ubiquitylation at conserved lysine residues and by  deubiquitylases Ubp2p and Ubp12p","termid":"PBO:0084908"}


id: GO:0045617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of keratinocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epidermal cell differentiation","termid":"GO:0045605"},{"relation_name":"is_a","term_name":"regulation of keratinocyte differentiation","termid":"GO:0045616"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of keratinocyte differentiation","synonyms":[{"name":"down regulation of keratinocyte differentiation","type":"exact"},{"name":"down-regulation of keratinocyte differentiation","type":"exact"},{"name":"downregulation of keratinocyte differentiation","type":"exact"},{"name":"inhibition of keratinocyte differentiation","type":"narrow"}],"termid":"GO:0045617"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["Unimod:43#N","OMSSA:182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: MONDO:0015283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternally inherited cardiomyopathy and hearing loss is a mitochondrial disease described in two unrelated families to date that has a heterogeneous clinical presentation characterized by the association of progressive sensorineural hearing loss with hypertrophic cardiomyopathy and, in the majority of cases, encephalomyopathy symptoms such as ataxia, slurred speech, progressive external opthalmoparesis (PEO), muscle weakness, myalgia, and exercise intolerance.","definition_xrefs":["Orphanet:1349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally-inherited cardiomyopathy and hearing loss","secondary_identifiers":["MEDGEN:1376897","GARD:18719","UMLS:C4510409"],"synonyms":[{"name":"maternally-inherited cardiomyopathy and deafness","type":"exact"},{"name":"tRNA-LYS-related cardiomyopathy-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0015283","xrefs":{"Monarch":{"xref_id":"0015283"}}}


id: PBO:0082365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Auxilin-like protein involved in vesicular transport; clathrin-binding protein required for uncoating of clathrin-coated vesicles; required for propagation of [URE3] prion variant","termid":"PBO:0082365"}


id: MONDO:0011215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteocraniostenosis is a lethal skeletal dysplasia characterized by a cloverleaf skull anomaly, facial dysmorphism, limb shortness, splenic hypo/aplasia and radiological anomalies including thin tubular bones with flared metaphyses and deficient calvarial mineralization.","definition_xrefs":["Orphanet:2763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocraniostenosis","secondary_identifiers":["MEDGEN:356331","UMLS:C1865639","ICD10CM:Q78.0","MESH:C537291","SCTID:722109008","icd11.foundation:539409723","OMIM:602361","GARD:3396"],"synonyms":[{"name":"GCLEB","type":"related"},{"name":"Habrodysplasia","type":"related"},{"name":"Osteocraniosplenic syndrome","type":"exact"},{"name":"gracile bone dysplasia","type":"exact"},{"name":"osteocraniostenosis","type":"exact"},{"name":"skeletal dysplasia lethal with gracile bones","type":"related"},{"name":"skeletal dysplasia, lethal, with gracile bones","type":"related"}],"termid":"MONDO:0011215","xrefs":{"Monarch":{"xref_id":"0011215"}}}


id: PBO:0083941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl cyclotransferase; cleaves the gamma-glutamyl bond of glutathione to yield 5-oxoproline and a Cys-Gly dipeptide; similar to mammalian pro-apoptotic protein ChaC1; expression of mouse ChaC1 in yeast increases apoptosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; periodically expressed during the metabolic cycle","termid":"PBO:0083941"}


id: GO:2000358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"},{"relation_name":"positively_regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kidney smooth muscle cell differentiation","termid":"GO:2000358"}


id: MONDO:0008517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly-polydactyly-ear lobe syndrome","secondary_identifiers":["MEDGEN:348333","MESH:C566091","GARD:5090","Orphanet:3259","OMIM:186350","UMLS:C1861347"],"synonyms":[{"name":"Spel syndrome","type":"related"},{"name":"hallux syndactyly ulnar polydactyly abnormal ear lobes","type":"related"},{"name":"syndactyly-polydactyly-earlobe syndrome","type":"related"}],"termid":"MONDO:0008517","xrefs":{"Monarch":{"xref_id":"0008517"}}}


id: PBO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3i","termid":"PBO:0002937"}


id: PBO:0027914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0027914"}


id: PBO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Swc4","termid":"PBO:0001277"}


id: MONDO:1012076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial digital syndrome, non-human animal","termid":"MONDO:1011654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial digital syndrome, cattle","secondary_identifiers":["OMIA:000360-9913"],"termid":"MONDO:1012076","xrefs":{"Monarch":{"xref_id":"1012076"}}}


id: PBO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 2","termid":"PBO:0071704"}


id: MONDO:0018513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"colorectal squamous cell carcinoma","termid":"MONDO:0006165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of colon","secondary_identifiers":["NCIT:C5490","SCTID:766981007","GARD:21768","MEDGEN:272494","DOID:5519","UMLS:C1333100","Orphanet:423994"],"synonyms":[{"name":"colon epidermoid carcinoma","type":"exact"},{"name":"colon squamous cell cancer","type":"exact"},{"name":"colon squamous cell carcinoma","type":"exact"},{"name":"colonic epidermoid carcinoma","type":"exact"},{"name":"colonic squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of colon","type":"exact"},{"name":"epidermoid carcinoma of the colon","type":"exact"},{"name":"squamous cell carcinoma of colon","type":"exact"},{"name":"squamous cell carcinoma of the colon","type":"exact"},{"name":"squamous cell colon carcinoma","type":"exact"}],"termid":"MONDO:0018513","xrefs":{"Monarch":{"xref_id":"0018513"}}}


id: GO:0070717
data:
  {"annotated_genes":["SJAG_02808","SJAG_01222","SJAG_04271","SJAG_03747","SJAG_00425","SJAG_04601","SJAG_01650","SJAG_03448","SJAG_03283","SJAG_04427","SJAG_03214","SJAG_01910"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89789,97875,73342,70899,75009,89829,79280,97443,77939,70707,76570,89424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008143"}]},"cv_name":"molecular_function","definition":"Binding to a stretch of purines (adenine or guanine) in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded RNA binding","termid":"GO:0003727"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01910":null,"SJAG_02808":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03747":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"poly-purine tract binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070717","terms_by_termid":{"GO:0008143":null}}


id: PBO:0004447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain protein","termid":"PBO:0004447"}


id: GO:0140353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid from a cell, into the extracellular region.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipid export from cell","synonyms":[{"name":"lipid efflux","type":"broad"}],"termid":"GO:0140353"}


id: PBO:0064383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 5","termid":"PBO:0064383"}


id: PBO:0005358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad3","termid":"PBO:0005358"}


id: PBO:0049466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin E (MNS blood group)","termid":"PBO:0049466"}


id: PBO:0005056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght1","termid":"PBO:0005056"}


id: RO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between a cell c and a protein complex or protein p if and only if that cell has as part a plasma_membrane[GO:0005886], and that plasma membrane has p as part.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_plasma_membrane_part","termid":"RO:0002104"}


id: PBO:0002766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 12 (predicted)","termid":"PBO:0002766"}


id: FYPO:0004691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a sphere, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spherical vegetative cell","termid":"FYPO:0000947"},{"relation_name":"is_a","term_name":"inviable swollen spheroid vegetative cell","termid":"FYPO:0002190"},{"relation_name":"is_a","term_name":"inviable spherical vegetative cell","termid":"FYPO:0004104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen spherical vegetative cell","synonyms":[{"name":"inviable enlarged spherical vegetative cell","type":"related"},{"name":"inviable enlarged volume spherical vegetative cell","type":"exact"},{"name":"inviable large spherical vegetative cell","type":"related"},{"name":"inviable swollen spherical cell during vegetative growth","type":"exact"},{"name":"inviable swollen spherical vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased spherical vegetative cell size","type":"related"},{"name":"inviable, increased spherical vegetative cell volume","type":"exact"},{"name":"lethal; swollen spherical vegetative cell","type":"exact"}],"termid":"FYPO:0004691"}


id: MONDO:0018925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemiplegic migraine (HM) is a rare variety of migraine with aura characterized by the presence of a motor weakness during the aura. Hemiplegic migraine has two main forms depending on the familial history: patients with at least one first- or second-degree relative who has aura including motor weakness have familial hemiplegic migraine (FHM); patients without such familial history have sporadic hemiplegic migraine (SHM).","definition_xrefs":["Orphanet:569"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign partial infantile seizures","termid":"MONDO:0015642"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic central nervous system and retinal vascular disease (obsolete MONDO:0015953)","termid":"MONDO:0015953"},{"relation_name":"is_a","term_name":"migraine with aura","termid":"MONDO:0005475"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial or sporadic hemiplegic migraine","secondary_identifiers":["GARD:10768","ICD9:346.30","NORD:1979","SCTID:59292006","icd11.foundation:1957063016"],"synonyms":[{"name":"Hemiplegic Migraine","type":"exact"},{"name":"familial or sporadic hemiplegic migraine","type":"exact"},{"name":"hemiplegic migraine","type":"exact"}],"termid":"MONDO:0018925","xrefs":{"Monarch":{"xref_id":"0018925"}}}


id: PBO:0079576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin D pseudogene 1","termid":"PBO:0079576"}


id: MONDO:0000562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypomyelinating leukoencephalopathy (obsolete MONDO:0000562)","termid":"MONDO:0000562","xrefs":{"Monarch":{"xref_id":"0000562"}}}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_02346","SJAG_05266","SJAG_03437","SJAG_03989","SJAG_00418","SJAG_02814","SJAG_01837","SJAG_03217","SJAG_01211","SJAG_01371","SJAG_00918","SJAG_03683","SJAG_00678","SJAG_03220","SJAG_04508","SJAG_01805","SJAG_00794","SJAG_03926","SJAG_02731","SJAG_03327","SJAG_04076","SJAG_05319","SJAG_05220","SJAG_01224","SJAG_01278","SJAG_01775"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88211,94169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[116981],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[110629,109457,94150,102755,100846,110203,114404,109201,108139,107821,95646,117217,95892,89484,113538,91321,116228,90088,101660,98233,110672,98954,105802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: PBO:0049852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 1","termid":"PBO:0049852"}


id: GO:0018518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydroxy-3-methyl-5,6-dihydroquinolin-2(1H)-one + NAD+ = 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + H+ + NADH.","definition_xrefs":["EC:1.3.1.65","RHEA:24556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05312","MetaCyc:RXN-643","UM-BBD_reactionID:r0053"],"synonyms":[{"name":"5,6-dihydrodiol-3-methyl-2-oxo-1,2-dihydroquinoline dehydrogenase","type":"related"},{"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018518"}


id: MONDO:0020118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dense granule disease (obsolete MONDO:0020118)","secondary_identifiers":["icd11.foundation:1930060978","Orphanet:98456"],"synonyms":[{"name":"Delta granule disease","type":"exact"}],"termid":"MONDO:0020118","xrefs":{"Monarch":{"xref_id":"0020118"}}}


id: PBO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf2","termid":"PBO:0002303"}


id: MOD:00599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom with one methyl group.","definition_xrefs":["Unimod:34","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated residue","synonyms":[{"name":"Me1Res","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"}],"termid":"MOD:00599"}


id: PBO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G2","termid":"PBO:0061587"}


id: PBO:0063764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain containing endocytic trafficking adaptor 1","termid":"PBO:0063764"}


id: PBO:0017528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5(predicted)","termid":"PBO:0017528"}


id: GO:0033332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ent-kaurene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5032","PMID:17064690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ent-kaurene metabolic process","termid":"GO:0033331"},{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-kaurene biosynthetic process","synonyms":[{"name":"ent-kaurene anabolism","type":"exact"},{"name":"ent-kaurene biosynthesis","type":"exact"},{"name":"ent-kaurene formation","type":"exact"},{"name":"ent-kaurene synthesis","type":"exact"}],"termid":"GO:0033332"}


id: MONDO:0009135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia type 1","termid":"MONDO:0020337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia, congenital dyserythropoietic, type 1a","secondary_identifiers":["OMIM:224120","DOID:0111398","UMLS:C5574667","MEDGEN:1807106"],"synonyms":[{"name":"CDA Ia","type":"related"},{"name":"CDAN1A","type":"related"},{"name":"anemia, congenital dyserythropoietic, type 1","type":"related"},{"name":"anemia, congenital dyserythropoietic, type 1a","type":"exact"},{"name":"anemia, congenital dyserythropoietic, type Ia","type":"exact"},{"name":"dyserythropoietic Anemia, congenital, type Ia","type":"related"}],"termid":"MONDO:0009135","xrefs":{"Monarch":{"xref_id":"0009135"}}}


id: PBO:0071536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene","termid":"PBO:0071536"}


id: FYECO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manganese ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Mn ions","synonyms":[{"name":"Mn2+ added","type":"related"},{"name":"manganese ions added","type":"exact"}],"termid":"FYECO:0000151"}


id: PBO:0018230
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae BTS1","termid":"PBO:0018230"}


id: PBO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIIb","termid":"PBO:0047449"}


id: FYPO:0006035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:14767070","GO:0051881","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial membrane potential","synonyms":[{"name":"normal mitochondrial membrane polarization","type":"exact"},{"name":"normal mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006035"}


id: PBO:0053638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 685","termid":"PBO:0053638"}


id: PBO:0110495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 55","termid":"PBO:0110495"}


id: MONDO:0015062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the stomach.","definition_xrefs":["NCIT:C95871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","secondary_identifiers":["MEDGEN:474032","ONCOTREE:SWDNET","UMLS:C3272399"],"synonyms":[{"name":"GNET","type":"exact"},{"name":"gastric NET","type":"exact"},{"name":"gastric NET G1/2","type":"exact"},{"name":"gastric neuroendocrine tumor","type":"exact"},{"name":"gastric neuroendocrine tumour","type":"exact"},{"name":"gastric well differentiated endocrine tumor","type":"exact"},{"name":"gastric well differentiated endocrine tumor/carcinoma","type":"exact"},{"name":"gastric well differentiated endocrine tumour","type":"exact"},{"name":"well-differentiated neuroendocrine tumors of the stomach","type":"related"},{"name":"well-differentiated neuroendocrine tumours of the stomach","type":"related"}],"termid":"MONDO:0015062","xrefs":{"Monarch":{"xref_id":"0015062"}}}


id: PBO:0075664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 5","termid":"PBO:0075664"}


id: GO:0033060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition or aggregation of coloring matter in an ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigmentation","termid":"GO:0033060"}


id: GO:0060314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"}


