# terms

id: GO:1903564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GO_REF:0000058","GOC:cilia","GOC:krc","GOC:TermGenie","PMID:22072986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cilium","termid":"GO:1903564"}


id: MONDO:0016680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic astrocytoma (grade III astrocytic tumor) or glioblastoma (grade IV astrocytic tumor).","definition_xrefs":["NCIT:C102897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"high grade astrocytic tumor","secondary_identifiers":["Orphanet:251561","MEDGEN:769639","GARD:20704","UMLS:C3640999"],"synonyms":[{"name":"high grade astrocytic neoplasm","type":"exact"},{"name":"high grade astrocytic tumor","type":"exact"},{"name":"high-grade astrocytic neoplasm","type":"exact"},{"name":"high-grade astrocytic tumor","type":"exact"},{"name":"high-grade astrocytic tumour","type":"exact"},{"name":"high-grade astrocytoma","type":"related"}],"termid":"MONDO:0016680","xrefs":{"Monarch":{"xref_id":"0016680"}}}


id: PBO:0082483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cargo-binding mu subunit of AP-2; AP-2 is a heterotetrameric endocytic cargo-binding adaptor that facilitates uptake of membrane proteins during clathrin-mediated endocytosis; Apm4p is required for AP-2 function and localization, and binds cell wall stress receptor Mid2p; AP-2 is required for cell polarity responses to pheromone, nutritional status and cell wall damage in S. cerevisiae, and for hyphal growth in C. albicans; AP-2 complex is conserved in mammals","termid":"PBO:0082483"}


id: MONDO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease caused by infection with rickettsia conorii subsp. coronorii.","definition_xrefs":["PMID:18760001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Indian tick typhus","secondary_identifiers":["Orphanet:101335","DOID:0050042","MEDGEN:1843392","UMLS:C0343768"],"termid":"MONDO:0000229","xrefs":{"Monarch":{"xref_id":"0000229"}}}


id: PBO:0064207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen activator, tissue type","termid":"PBO:0064207"}


id: PBO:0016974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mcp3","termid":"PBO:0016974"}


id: MONDO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 2","secondary_identifiers":["UMLS:C5543273","OMIM:619267","GARD:16439","MEDGEN:1782592"],"synonyms":[{"name":"GT2","type":"exact"},{"name":"Glanzmann thrombasthenia 2","type":"exact"},{"name":"bleeding disorder, platelet-type, 23","type":"exact"}],"termid":"MONDO:0031009","xrefs":{"Monarch":{"xref_id":"0031009"}}}


id: FYPO:0001531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal GTPase activity","termid":"FYPO:0001530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased GTPase activity","synonyms":[{"name":"reduced GTPase activity","type":"exact"}],"termid":"FYPO:0001531"}


id: PBO:0087873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; acts as a nuclear anchor to retain the ribonucleotide reductase small subunit heterodimer, Rnr2p-Rnr4p, in the nucleus when cells are not in S phase; contains WD repeats","termid":"PBO:0087873"}


id: MONDO:1012367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"protein-losing nephropathy, non-human animal","termid":"MONDO:1011914"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-losing nephropathy, dog","secondary_identifiers":["OMIA:001326-9615"],"termid":"MONDO:1012367","xrefs":{"Monarch":{"xref_id":"1012367"}}}


id: PBO:0031362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_K-252a","termid":"PBO:0031362"}


id: PBO:0079360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3f pseudogene","termid":"PBO:0079360"}


id: PBO:0077983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 5-1","termid":"PBO:0077983"}


id: FYPO:0000998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during nitrogen starvation","synonyms":[{"name":"cell morphology, elongated cell during nitrogen starvation","type":"exact"},{"name":"elongated cell during nitrogen depletion","type":"exact"},{"name":"elongated cell during nitrogen deprivation","type":"exact"},{"name":"gain of polarization during quiescence","type":"related"},{"name":"long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0000998"}


id: PBO:0077624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB15B antisense RNA 1","termid":"PBO:0077624"}


id: GO:0061049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"physiological cardiac muscle hypertrophy","termid":"GO:0003301"},{"relation_name":"part_of","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in cardiac muscle cell development","synonyms":[{"name":"cardiac muscle cell hypertrophy","type":"related"},{"name":"cardiomyocyte growth","type":"related"},{"name":"heart muscle cell growth","type":"related"}],"termid":"GO:0061049"}


id: PBO:0108512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, Clr6 and Rpd3L complex subunit Prw1","termid":"PBO:0108512"}


id: MONDO:0023212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Garret-Tripp syndrome","secondary_identifiers":["UMLS:C2930965","MEDGEN:419297","MESH:C535646"],"synonyms":[{"name":"Garret Tripp syndrome","type":"related"},{"name":"Intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"mental retardation with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"polydactyly alopecia seborrheic dermatitis","type":"related"}],"termid":"MONDO:0023212","xrefs":{"Monarch":{"xref_id":"0023212"}}}


id: PBO:0041171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 4 pseudogene 1","termid":"PBO:0041171"}


id: PR:O74442
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp16 gene.","definition_xrefs":["UniProtKB:O74442","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.12c","synonyms":[{"name":"Spom972h-ubp16","type":"exact"},{"name":"deubiquitinating enzyme 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74442"}


id: SO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element, a few hundred base pairs long, that is dispersed throughout the genome. A common human SINE is the Alu element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINE_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Short_interspersed_nuclear_element"],"synonyms":[{"name":"SINE element","type":"exact"},{"name":"Short interspersed element","type":"exact"},{"name":"Short interspersed nuclear element","type":"exact"}],"termid":"SO:0000206"}


id: SO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a nucleotide polymer that has no terminal nucleotide residues.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topology_attribute","termid":"SO:0000986"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular","synonyms":[{"name":"zero-ended","type":"related"}],"termid":"SO:0000988"}


id: PBO:0003354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 associated cyclin","termid":"PBO:0003354"}


id: PBO:0030526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromatin","termid":"PBO:0030526"}


id: GO:0102616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin D + NAD(P) = oryzalexin A + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin A synthase activity (obsolete GO:0102616)","termid":"GO:0102616"}


id: PBO:0054277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1667","termid":"PBO:0054277"}


id: GO:0033525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ester derivates of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"sinapate ester metabolic process","termid":"GO:0033524"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"sinapate ester biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3301"],"synonyms":[{"name":"sinapate ester anabolism","type":"exact"},{"name":"sinapate ester biosynthesis","type":"exact"},{"name":"sinapate ester formation","type":"exact"},{"name":"sinapate ester synthesis","type":"exact"}],"termid":"GO:0033525"}


id: PBO:0036417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, human TMEM186 ortholog","termid":"PBO:0036417"}


id: GO:0036161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of calcitonin, a peptide hormone that participates in calcium and phosphorus metabolism, from a cell.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcitonin secretion","termid":"GO:0036161"}


id: CHEBI:17345
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP","termid":"CHEBI:17345"}


id: PBO:0047944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(16)(p13.11)","termid":"PBO:0047944"}


id: PBO:0081446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 304","termid":"PBO:0081446"}


id: GO:0052457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052457)","synonyms":[{"name":"modulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"modulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052457"}


id: PBO:0081858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF790 antisense RNA 1","termid":"PBO:0081858"}


id: PBO:0042615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol synthase 1","termid":"PBO:0042615"}


id: PBO:0088099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uracil-DNA glycosylase; required for repair of uracil in DNA formed by spontaneous cytosine deamination; efficiently excises uracil from single-stranded DNA in vivo; not required for strand-specific mismatch repair; cell-cycle regulated, expressed in late G1; localizes to mitochondria and nucleus","termid":"PBO:0088099"}


id: PBO:0078493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 12-1","termid":"PBO:0078493"}


id: PBO:0087218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein; assists in association of proteasome core particle with regulatory particle; inhibitor of proteasome in vivo and in vitro; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087218"}


id: PBO:0089176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi tether Uso1","termid":"PBO:0089176"}


id: PBO:0062505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 7 pseudogene","termid":"PBO:0062505"}


id: GO:0090624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:15260970","PMID:19239888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"endoribonuclease activity, cleaving miRNA-paired mRNA","termid":"GO:0090624"}


id: PBO:0089450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane pyridoxal family transmembrane transporter","termid":"PBO:0089450"}


id: PBO:0027629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_in_cell","termid":"PBO:0027629"}


id: FYPO:0006555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of two or more proteins to DNA is abnormal. The proteins may bind simultaneously or sequentially, but both or all would normally be present together on DNA at some time. One affected gene product may be encoded by the mutated gene, or all may be encoded by different genes.","definition_xrefs":["PomBase:mah","PMID:20924116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal multiple protein binding to DNA","synonyms":[{"name":"abnormal cooperative DNA binding","type":"related"},{"name":"abnormal protein-DNA ternary complex formation","type":"narrow"},{"name":"abnormal protein-protein interaction on DNA","type":"related"},{"name":"abnormal ternary complex formation","type":"related"},{"name":"abolished protein-DNA ternary complex formation","type":"narrow"},{"name":"abolished ternary complex formation","type":"related"}],"termid":"FYPO:0006555"}


id: MONDO:0013984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the OTOGL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 84B","secondary_identifiers":["OMIM:614944","UMLS:C3554159","MEDGEN:767073","DOID:0110530","GARD:22647"],"synonyms":[{"name":"DFNB84B","type":"narrow"},{"name":"OTOGL autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in OTOGL","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 84B","type":"exact"},{"name":"deafness, autosomal recessive 84B","type":"narrow"},{"name":"deafness, autosomal recessive 84b","type":"narrow"},{"name":"deafness, autosomal recessive type 84B","type":"narrow"}],"termid":"MONDO:0013984","xrefs":{"Monarch":{"xref_id":"0013984"}}}


id: PBO:0083570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF MRS1","termid":"PBO:0083570"}


id: PBO:0064151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 3","termid":"PBO:0064151"}


id: GO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18836040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host response to induction by symbiont of tumor, nodule or growth in host","termid":"GO:0080034"}


id: FYPO:0005147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished proteasome localization to nuclear periphery","synonyms":[{"name":"abolished proteasome localisation to nuclear periphery","type":"exact"},{"name":"abolished proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abolished proteasome localization to nuclear periphery during vegetative growth","type":"exact"},{"name":"proteasome localization to nuclear periphery abolished","type":"exact"}],"termid":"FYPO:0005147"}


id: PBO:0048130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 10","termid":"PBO:0048130"}


id: MONDO:0008018
data:
  {"annotated_genes":["SJAG_02226","SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86008,86009],"is_not":false,"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"Muir-Torre syndrome (MTS) is a form of hereditary nonpolyposis colon cancer (HNPCC) characterized by cutaneous sebaceous tumors, keratoacanthomas and at least one visceral malignancy, most frequently gastrointestinal carcinoma.","definition_xrefs":["Orphanet:587"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited skin tumor (obsolete MONDO:0015950)","termid":"MONDO:0015950"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"benign tumor of palpebral epidermis","termid":"MONDO:0020173"},{"relation_name":"excluded_subClassOf","term_name":"obsolete palpebral sebaceous gland tumor (obsolete MONDO:0020176)","termid":"MONDO:0020176"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0000426"],"is_obsolete":false,"name":"Muir-Torre syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1321489","MEDGEN:231157","DOID:0050465","icd11.foundation:229304403","MedDRA:10063042","MESH:D055653","GARD:6821","NCIT:C84905","OMIM:158320","SCTID:403824007"],"synonyms":[{"name":"MRTES","type":"related"},{"name":"MUIR-Torre syndrome","type":"related"},{"name":"Muir-Torre syndrome","type":"exact"},{"name":"cutaneous sebaceous neoplasms and keratoacanthomas multiple with gastrointestinal and other carcinomas","type":"related"},{"name":"cutaneous sebaceous neoplasms and keratoacanthomas, multiple, with gastrointestinal and Other carcinomas","type":"related"},{"name":"multiple keratoacanthoma, Muir-Torre type","type":"exact"}],"termid":"MONDO:0008018","terms_by_termid":{"MONDO:0008018":null},"xrefs":{"Monarch":{"xref_id":"0008018"}}}


id: GO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an angioblast cell. Angioblasts are one of the two products formed from hemangioblast cells (the other being pluripotent hemopoietic stem cells).","definition_xrefs":["CL:0000566","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell differentiation","synonyms":[{"name":"angioblastic mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0035779"}


id: PATO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being present in two copies.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased amount","termid":"PATO:0000470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated","synonyms":[{"name":"doubled","type":"exact"}],"termid":"PATO:0001473"}


id: PBO:0062121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 49 pseudogene","termid":"PBO:0062121"}


id: PBO:0065396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 2 pseudogene 2","termid":"PBO:0065396"}


id: GO:1901764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphinothricin.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphinothricin metabolic process","synonyms":[{"name":"phosphinothricin metabolism","type":"exact"}],"termid":"GO:1901764"}


id: GO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase II basal transcription factor binding (obsolete GO:0001083)","synonyms":[{"name":"RNA polymerase II basal transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001083"}


id: PR:Q9P7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hop1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific protein hop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.02","synonyms":[{"name":"Spom972h-hop1","type":"exact"},{"name":"linear element-associated protein hop1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P2"}


id: PBO:0042808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 2 for microRNA let-7b","termid":"PBO:0042808"}


id: GO:0097225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece.","definition_xrefs":["GOC:cjm","MP:0009831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm midpiece","termid":"GO:0097225"}


id: SO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type II:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees < phi < -20 degrees, +80 degrees < psi < +180 degrees. Residue(i+2): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_right_handed_type_two","secondary_identifiers":["BS:00214"],"synonyms":[{"name":"beta turn right handed type two","type":"exact"},{"name":"beta_turn_iir","type":"exact"},{"name":"type II beta turn","type":"exact"},{"name":"type II turn","type":"exact"}],"termid":"SO:0001137"}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: GO:0000730
data:
  {"annotated_genes":["SJAG_04530","SJAG_02079","SJAG_01410","SJAG_02708","SJAG_02267","SJAG_03221","SJAG_01708","SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65205,65785,72618,75466,76200],"is_not":false,"summary":null,"term":"GO:0000730"},{"annotations":[78911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[110615,107978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) into higher order oligomers on single-stranded DNA.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281","GO:0006310","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"DNA recombinase assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Rad51 nucleoprotein filament formation","type":"exact"}],"termid":"GO:0000730","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: GO:0140498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex with alpha-(1->6)-mannosyltransferase activity, located in the cis Golgi membrane; adds mannan to N-linked glycans on proteins as part of the priming and elongation of alpha 1,6-linked Man backbone. In S. cerevisiae, contains Mnn9p and Van1p.","definition_xrefs":["PMID:9430634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan polymerase complex","termid":"GO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mannan polymerase I complex","termid":"GO:0140498"}


id: PBO:0059145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPL proto-oncogene, thrombopoietin receptor","termid":"PBO:0059145"}


id: GO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into CDP to produce a CTP.","definition_xrefs":["PMID:7499258"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP phosphorylation (obsolete GO:0061508)","termid":"GO:0061508"}


id: GO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leucophore differentiation","termid":"GO:0048775"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leucophore differentiation","synonyms":[{"name":"down regulation of leucophore differentiation","type":"exact"},{"name":"down-regulation of leucophore differentiation","type":"exact"},{"name":"downregulation of leucophore differentiation","type":"exact"},{"name":"inhibition of leucophore differentiation","type":"narrow"}],"termid":"GO:0048776"}


id: PATO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplitude","termid":"PATO:0000080"}


id: PBO:0027528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_aseptate_cell_with_mitotic_cell_cycle_arrest_in_G2_before_cell_separation","termid":"PBO:0027528"}


id: PR:Q10280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gaf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor gaf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.01","synonyms":[{"name":"Gaf-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gaf1","type":"exact"}],"termid":"PR:Q10280"}


id: PBO:0070229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 165 pseudogene","termid":"PBO:0070229"}


id: PBO:0071792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p38","termid":"PBO:0071792"}


id: GO:1903524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood circulation.","definition_xrefs":["GOC:TermGenie","PMID:10659969","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"positively_regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood circulation","synonyms":[{"name":"activation of blood circulation","type":"narrow"},{"name":"activation of hemolymph circulation","type":"related"},{"name":"positive regulation of hemolymph circulation","type":"related"},{"name":"up regulation of blood circulation","type":"exact"},{"name":"up regulation of hemolymph circulation","type":"related"},{"name":"up-regulation of blood circulation","type":"exact"},{"name":"up-regulation of hemolymph circulation","type":"related"},{"name":"upregulation of blood circulation","type":"exact"},{"name":"upregulation of hemolymph circulation","type":"related"}],"termid":"GO:1903524"}


id: GO:0009691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytokinin biosynthetic process","synonyms":[{"name":"cytokinin anabolism","type":"exact"},{"name":"cytokinin biosynthesis","type":"exact"},{"name":"cytokinin formation","type":"exact"},{"name":"cytokinin synthesis","type":"exact"}],"termid":"GO:0009691"}


id: PBO:0004422
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates eng1 target genes","termid":"PBO:0004422"}


id: MONDO:0014226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary immunodeficiency disorder characterized by persistent CD4 T-cell lymphopenia (less than 300 cells/B5L on multiple occasions) not associated with any other underlying primary or secondary immune deficiency. Patients typically present opportunistic infections (with cryptococcal, mycobacterial, candidal, varicella zoster virus infections and progressive multifocal leukoencephalopathy being the most prevalent), malignancies (mainly lymphoproliferative disorders), or autoimmune disorders. Some individuals are asymptomatic and incidentally diagnosed.","definition_xrefs":["Orphanet:228000"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"idiopathic CD4 lymphocytopenia","secondary_identifiers":["GARD:12375","OMIM:615518","MEDGEN:816098","icd11.foundation:1639000446","SCTID:763713000","UMLS:C3809768","DOID:0111987"],"synonyms":[{"name":"ICL","type":"related"},{"name":"IMD13","type":"related"},{"name":"idiopathic CD4 positive T-lymphocytopenia","type":"related"},{"name":"idiopathic Cd4 lymphopenia","type":"related"},{"name":"immunodeficiency 13","type":"related"},{"name":"immunodeficiency type 13","type":"exact"}],"termid":"MONDO:0014226","xrefs":{"Monarch":{"xref_id":"0014226"}}}


id: PBO:0113429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits the mitotic exit network (MEN) when the spindle position checkpoint (SPOC) is activated; regulates peroxisomal transport and vacuolar inheritance along with Frk1p; protects the peroxisomal Myo2p receptor Inp2p from degradation in mother cells along with Frk1p; localizes asymmetrically to mother cell cortex, spindle pole body and bud neck; KIN4 has a paralog, FRK1, that arose from the whole genome duplication","termid":"PBO:0113429"}


id: PBO:0043356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 2","termid":"PBO:0043356"}


id: PBO:0079606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F pseudogene 3","termid":"PBO:0079606"}


id: PBO:0069491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 758, pseudogene","termid":"PBO:0069491"}


id: PBO:0071955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 5","termid":"PBO:0071955"}


id: PBO:0073254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 6","termid":"PBO:0073254"}


id: FYPO:0008283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate (1-IP7) is lower than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular myo-inositol level","termid":"FYPO:0008280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular 1-IP7 level","termid":"FYPO:0008283"}


id: FYPO:0003615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is decreased.","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic DNA double-strand break formation","synonyms":[{"name":"reduced meiotic DNA double-strand break formation","type":"exact"}],"termid":"FYPO:0003615"}


id: PBO:0081223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 3","termid":"PBO:0081223"}


id: PBO:0083105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase, potent G-quadruplex DNA binder/unwinder; possesses strand annealing activity; promotes DNA synthesis during break-induced replication; involved in crossover recombination; works with Hrq1p to maintain telomere length homeostasis; translation from different start sites produces mitochondrial (DNA repair and recombination) and nuclear (catalytic inhibitor of telomerase) forms; mutations affect Zn, Fe homeostasis; regulated by Rad53p-dependent phosphorylation in rho0 cells","termid":"PBO:0083105"}


id: PBO:0044741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19B","termid":"PBO:0044741"}


id: MONDO:0013522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of TINF2 on chromosome 14q12.","definition_xrefs":["DOID:0070018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 3","secondary_identifiers":["UMLS:C3151445","NCIT:C176923","MEDGEN:462795","GARD:15742","OMIM:613990"],"synonyms":[{"name":"DKCA3","type":"exact"},{"name":"autosomal dominant dyskeratosis congenita 3","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 3","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant type 3","type":"exact"}],"termid":"MONDO:0013522","xrefs":{"Monarch":{"xref_id":"0013522"}}}


id: GO:1900969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of pteridine metabolic process","termid":"GO:0045863"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin metabolic process","termid":"GO:1900968"},{"relation_name":"negatively_regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sarcinapterin metabolic process","synonyms":[{"name":"down regulation of sarcinapterin metabolic process","type":"exact"},{"name":"down regulation of sarcinapterin metabolism","type":"exact"},{"name":"down-regulation of sarcinapterin metabolic process","type":"exact"},{"name":"down-regulation of sarcinapterin metabolism","type":"exact"},{"name":"downregulation of sarcinapterin metabolic process","type":"exact"},{"name":"downregulation of sarcinapterin metabolism","type":"exact"},{"name":"inhibition of sarcinapterin metabolic process","type":"narrow"},{"name":"inhibition of sarcinapterin metabolism","type":"exact"},{"name":"negative regulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900969"}


id: PBO:0027560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0027560"}


id: PBO:0011973
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae COQ2","termid":"PBO:0011973"}


id: PBO:0005690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex28/29 (predicted)","termid":"PBO:0005690"}


id: MONDO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Churg-Strauss syndrome (obsolete MONDO:0005703)","termid":"MONDO:0005703","xrefs":{"Monarch":{"xref_id":"0005703"}}}


id: FYPO:0007708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: PBO:0060873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural EGFL like 1","termid":"PBO:0060873"}


id: PBO:0090590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-amylase homolog Aah3","termid":"PBO:0090590"}


id: PBO:0091652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amf1","termid":"PBO:0091652"}


id: PBO:0039416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 1","termid":"PBO:0039416"}


id: PBO:0062892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L mitochondrial inner membrane protein","termid":"PBO:0062892"}


id: GO:0035373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chondroitin sulfate proteoglycan, any proteoglycan containing chondroitin sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan binding","termid":"GO:0035373"}


id: PBO:0007024
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds AP-1 site 5'-TGACTCA-3'","termid":"PBO:0007024"}


id: PBO:0117046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound ghrelin O-acyltransferase MBOAT4","termid":"PBO:0117046"}


id: GO:0052769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the glycosidic cleavage of the terminal 2-acetamido-2-deoxy-beta-D-glucopyranoside 6-sulfate (6-SO3-GlcNAc) residue from sulfomucin, a sulfated mucin derivative.","definition_xrefs":["GOC:mengo_curators","PMID:15716424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-6-sulfate-N-acetylglucosaminidase activity","synonyms":[{"name":"beta-6-SO3-N-acetylglucosaminidase activity","type":"broad"},{"name":"exosulfoglycosidase activity","type":"broad"},{"name":"sulfoglycosidase activity","type":"broad"},{"name":"sulfomucin beta-6-sulfate-N-acetylglucosaminidase activity","type":"exact"}],"termid":"GO:0052769"}


id: GO:1902977
data:
  {"annotated_genes":["SJAG_02607","SJAG_00327","SJAG_04995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72396,78539,57522],"is_not":false,"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"Any DNA replication preinitiation complex assembly that is involved in mitotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_02607":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0065003","GO:0007049","GO:0044085","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"mitotic DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"DNA replication preinitiation complex formation involved in mitotic cell cycle","type":"exact"},{"name":"pre-IC complex assembly involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1902977","terms_by_termid":{"GO:1902977":null}}


id: PBO:0113547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in vacuolar membrane; targeted to vacuole via AP-3 pathway","termid":"PBO:0113547"}


id: PBO:0047699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH family member 2","termid":"PBO:0047699"}


id: GO:0048784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, contributing to the process in which a membrane-bounded organelle develops into a pigment granule. Maturation is a developmental process, independent of morphogenetic (shape) change, that is required for a cell or structure to attain its fully functional state.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in developmental pigmentation","termid":"GO:0043324"},{"relation_name":"is_a","term_name":"pigment biosynthetic process involved in pigment accumulation","termid":"GO:0043477"},{"relation_name":"part_of","term_name":"pigment granule maturation","termid":"GO:0048757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process involved in pigment granule maturation","synonyms":[{"name":"pigment biosynthetic process during pigment granule maturation","type":"related"}],"termid":"GO:0048784"}


id: PBO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC82 ortholog","termid":"PBO:0036279"}


id: PBO:0078531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 24","termid":"PBO:0078531"}


id: MONDO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyrotoxic periodic paralysis (obsolete MONDO:0000098)","termid":"MONDO:0000098","xrefs":{"Monarch":{"xref_id":"0000098"}}}


id: GO:0010710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen catabolic process","synonyms":[{"name":"regulation of collagen breakdown","type":"exact"},{"name":"regulation of collagen catabolism","type":"exact"},{"name":"regulation of collagen degradation","type":"exact"}],"termid":"GO:0010710"}


id: GO:0042763
data:
  {"annotated_genes":["SJAG_03013","SJAG_01769","SJAG_03721","SJAG_03587","SJAG_01469","SJAG_00663","SJAG_04470","SJAG_00974","SJAG_03688","SJAG_03483","SJAG_01855","SJAG_03915","SJAG_04948","SJAG_00971","SJAG_04275","SJAG_00821","SJAG_00405","SJAG_01825","SJAG_02736","SJAG_01697","SJAG_03145","SJAG_02368","SJAG_03638","SJAG_00826","SJAG_04781","SJAG_04922","SJAG_03536","SJAG_04001","SJAG_04184","SJAG_03746","SJAG_04483","SJAG_02169","SJAG_04080","SJAG_00430","SJAG_02076","SJAG_01867","SJAG_01084","SJAG_03250","SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114765,92104,115637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042764"},{"annotations":[113337,92194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905754"},{"annotations":[94201,105297,101803,91627,102026,91838,96957,97879,103619,107697,109374,109611,116543,119314,117808,91059,101171,93905,103571,88552,95702,94798,93227,104487,114386,117225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005628"},{"annotations":[103233,99153,118831],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[103234,105611,118832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"},{"annotations":[116271,100439,94838,106334],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A cell or part of the cell that constitutes an early developmental stage of a spore, a small reproductive body that is highly resistant to desiccation and heat and is capable of growing into a new organism, produced especially by certain bacteria, fungi, algae, and nonflowering plants.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01084":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01769":null,"SJAG_01825":null,"SJAG_01855":null,"SJAG_01867":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03638":null,"SJAG_03688":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intracellular immature spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore","type":"related"}],"termid":"GO:0042763","terms_by_termid":{"GO:0005628":null,"GO:0032169":null,"GO:0042764":null,"GO:0070056":null,"GO:0070057":null,"GO:1905754":null}}


id: PBO:0055260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2687","termid":"PBO:0055260"}


id: MONDO:1010605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, goat","secondary_identifiers":["OMIA:000536-9925"],"termid":"MONDO:1010605","xrefs":{"Monarch":{"xref_id":"1010605"}}}


id: GO:0018163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-DNA)-L-tyrosine.","definition_xrefs":["RESID:AA0254"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via the 5'-end to peptidyl-tyrosine (obsolete GO:0018163)","synonyms":[{"name":"DNA-protein covalent cross-linking via the 5' end to peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018163"}


id: PBO:0083482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TDP1","termid":"PBO:0083482"}


id: GO:1902212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prolactin signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11773439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of prolactin signaling pathway","termid":"GO:1902211"},{"relation_name":"negatively_regulates","term_name":"prolactin signaling pathway","termid":"GO:0038161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prolactin signaling pathway","synonyms":[{"name":"down regulation of PRL signaling pathway","type":"exact"},{"name":"down regulation of prolactin signaling pathway","type":"exact"},{"name":"down regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of PRL signaling pathway","type":"exact"},{"name":"down-regulation of prolactin signaling pathway","type":"exact"},{"name":"down-regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"downregulation of PRL signaling pathway","type":"exact"},{"name":"downregulation of prolactin signaling pathway","type":"exact"},{"name":"downregulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"inhibition of PRL signaling pathway","type":"narrow"},{"name":"inhibition of prolactin signaling pathway","type":"narrow"},{"name":"inhibition of prolactin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of PRL signaling pathway","type":"exact"},{"name":"negative regulation of prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902212"}


id: MONDO:0006098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lobular neoplasia characterized by lobular epithelial proliferation that does not completely fill the lobular unit of the breast.","definition_xrefs":["NCIT:C4730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"lobular neoplasia","termid":"MONDO:0002486"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"atypical lobular breast hyperplasia","secondary_identifiers":["MEDGEN:277968","SCTID:450697004","ICD9:610.8","UMLS:C1368920","EFO:1000100"],"synonyms":[{"name":"ALH","type":"exact"},{"name":"atypical breast lobular hyperplasia","type":"exact"},{"name":"atypical lobular breast hyperplasia","type":"exact"},{"name":"atypical lobular hyperplasia","type":"exact"},{"name":"atypical lobular hyperplasia of breast","type":"exact"},{"name":"atypical lobular hyperplasia of the breast","type":"exact"}],"termid":"MONDO:0006098","xrefs":{"Monarch":{"xref_id":"0006098"}}}


id: PBO:0074003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 4","termid":"PBO:0074003"}


id: PBO:0048742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 4","termid":"PBO:0048742"}


id: FYPO:0005116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the nucleus, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased punctate nuclear protein localization","synonyms":[{"name":"increased protein localization to nuclear puncta","type":"exact"},{"name":"increased punctate nuclear protein localisation","type":"exact"},{"name":"increased punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate nuclear protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0005116"}


id: PBO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylethanolamine acid amidase","termid":"PBO:0060418"}


id: SO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter whereby activity is induced by the presence or absence of biotic or abiotic factors.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible_promoter","synonyms":[{"name":"inducible promoter","type":"exact"}],"termid":"SO:0002051"}


id: MONDO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin amelanotic melanoma (obsolete MONDO:0000932)","termid":"MONDO:0000932","xrefs":{"Monarch":{"xref_id":"0000932"}}}


id: MONDO:1011153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid arthritis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis, non-human animal","termid":"MONDO:1010294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid arthritis, dog","secondary_identifiers":["OMIA:000067-9615"],"termid":"MONDO:1011153","xrefs":{"Monarch":{"xref_id":"1011153"}}}


id: PBO:0072573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase regulatory TP53 inducible subunit M2B","termid":"PBO:0072573"}


id: PBO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family Sec14","termid":"PBO:0000483"}


id: PBO:0057435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 552","termid":"PBO:0057435"}


id: FYPO:0005059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break resection is decreased. Meiotic DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:1990899","PMID:26130711","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic DNA double-strand break resection","synonyms":[{"name":"decreased meiotic DNA double-strand break resectioning","type":"exact"},{"name":"reduced meiotic DNA double-strand break resection","type":"exact"}],"termid":"FYPO:0005059"}


id: MONDO:0016696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade III oligodendroglioma with focal or diffuse malignant morphologic features (prominent nuclear pleomorphism, mitoses, and increased cellularity).","definition_xrefs":["NCIT:C4326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglial tumor","termid":"MONDO:0018744"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"grade III glioma","termid":"MONDO:0021640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic oligodendroglioma","secondary_identifiers":["Orphanet:251630","UMLS:C0334590","EFO:0002501","MedDRA:10026659","DOID:7154","ICDO:9451/3","ONCOTREE:AODG","MEDGEN:90812","GARD:9472"],"synonyms":[{"name":"WHO grade III oligodendroglial neoplasm","type":"exact"},{"name":"WHO grade III oligodendroglial tumor","type":"exact"},{"name":"WHO grade III oligodendroglial tumour","type":"exact"},{"name":"anaplastic oligodendroglioma","type":"exact"},{"name":"malignant oligodendroglioma","type":"exact"},{"name":"oligodendroglioma, anaplastic, malignant","type":"exact"},{"name":"oligodendroglioma, malignant","type":"exact"},{"name":"undifferentiated oligodendroglioma","type":"exact"}],"termid":"MONDO:0016696","xrefs":{"Monarch":{"xref_id":"0016696"}}}


id: PBO:0078522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 13","termid":"PBO:0078522"}


id: MONDO:0019615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary dermoid and epidermoid cysts","secondary_identifiers":["Orphanet:91351","MEDGEN:1674582","GARD:19161","UMLS:C5190781"],"termid":"MONDO:0019615","xrefs":{"Monarch":{"xref_id":"0019615"}}}


id: GO:1905208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["PMID:23069713","GOC:BHF_miRNA","GO_REF:0000058","GOC:bc","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"negatively_regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiocyte differentiation","synonyms":[{"name":"down regulation of cardiac cell differentiation","type":"exact"},{"name":"down regulation of cardiocyte differentiation","type":"exact"},{"name":"down regulation of heart cell differentiation","type":"exact"},{"name":"down-regulation of cardiac cell differentiation","type":"exact"},{"name":"down-regulation of cardiocyte differentiation","type":"exact"},{"name":"down-regulation of heart cell differentiation","type":"exact"},{"name":"downregulation of cardiac cell differentiation","type":"exact"},{"name":"downregulation of cardiocyte differentiation","type":"exact"},{"name":"downregulation of heart cell differentiation","type":"exact"},{"name":"inhibition of cardiac cell differentiation","type":"narrow"},{"name":"inhibition of cardiocyte differentiation","type":"narrow"},{"name":"inhibition of heart cell differentiation","type":"narrow"},{"name":"negative regulation of cardiac cell differentiation","type":"exact"},{"name":"negative regulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905208"}


id: PBO:0088843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Hst2","termid":"PBO:0088843"}


id: PBO:0084180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; involved in regulation of chromatin structure in both transcribed and silenced chromosomal regions; affects transcriptional elongation; has a role in regulation of Ty1 transposition; interacts physically and functionally with Chromatin Assembly Factor-1 (CAF-1)","termid":"PBO:0084180"}


id: GO:0031719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 cannabinoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 2 cannabinoid receptor binding","synonyms":[{"name":"type 2 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031719"}


id: PBO:0028006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_contraction","termid":"PBO:0028006"}


id: FYPO:0006752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:29632066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"},{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at subtelomere during vegetative growth","type":"related"},{"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin region during vegetative growth","type":"exact"},{"name":"increased histone H4K16 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased subtelomeric heterochromatin histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006752"}


id: MONDO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weaver-Williams syndrome is a multiple congenital anomalies syndrome characterized by moderate-to-severe intellectual disability, decreased muscle mass, microcephaly, facial dysmorphism (prominent ears, midfacial hypoplasia, small mouth and cleft palate), clinodactyly of the fingers, delayed osseous maturation and generalized bone hypoplasia. The syndrome has been described in a brother and sister and an autosomal recessive mode of inheritance has been suggested. There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:3448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weaver-Williams syndrome","secondary_identifiers":["UMLS:C0796198","GARD:5545","MEDGEN:1392915"],"termid":"MONDO:0018095","xrefs":{"Monarch":{"xref_id":"0018095"}}}


id: PR:P50530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B9.02c","synonyms":[{"name":"Spom972h-sck1","type":"exact"}],"termid":"PR:P50530"}


id: PBO:0064571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 3","termid":"PBO:0064571"}


id: GO:0071900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}


id: PBO:0002961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps51 (predicted)","termid":"PBO:0002961"}


id: PBO:0082803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart","termid":"PBO:0082803"}


id: MONDO:0016204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic copper-associated cirrhosis is a rare copper-overload liver disease characterized by a rapidly progressive liver cirrhosis from the first few years of life leading to hepatic insufficiency and harboring a specific pathological aspect: pericellular fibrosis, inflammatory infiltration, hepatocyte necrosis, absence of steatosis, poor regeneration and histochemical copper staining.","definition_xrefs":["Orphanet:209919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"idiopathic copper-associated cirrhosis","secondary_identifiers":["UMLS:C4274853","GARD:17106","MEDGEN:907284","SCTID:715864007","icd11.foundation:1692504835"],"synonyms":[{"name":"non-Wilsonian hepatic copper toxicosis of infancy and childhood","type":"exact"}],"termid":"MONDO:0016204","xrefs":{"Monarch":{"xref_id":"0016204"}}}


id: MONDO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glandular epithelial neoplasm that arises from the vagina and shows intestinal differentiation.","definition_xrefs":["NCIT:C40256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal adenoma","secondary_identifiers":["DOID:5402","MEDGEN:274377","UMLS:C1519913"],"synonyms":[{"name":"vagina adenoma","type":"exact"},{"name":"vaginal adenoma","type":"exact"}],"termid":"MONDO:0003434","xrefs":{"Monarch":{"xref_id":"0003434"}}}


id: GO:0033485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"cyanidin 3-O-glucoside metabolic process","termid":"GO:1901038"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"cyanidin 3-O-glucoside anabolism","type":"exact"},{"name":"cyanidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"cyanidin 3-O-glucoside formation","type":"exact"},{"name":"cyanidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033485"}


id: PBO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone fold","termid":"PBO:0000297"}


id: PBO:0085473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology and sporulation; homolog of the human protein Dullard","termid":"PBO:0085473"}


id: PBO:0042228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNY antisense RNA 1","termid":"PBO:0042228"}


id: PBO:0058349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4722","termid":"PBO:0058349"}


id: FYECO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where glycerol is the sole carbon source (i.e. NO addition of glucose/ethanol etc at all).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol MM","secondary_identifiers":["FYECO:0000077"],"synonyms":[{"name":"glycerol minimal medium","type":"exact"}],"termid":"FYECO:0000054"}


id: GO:0036140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-asparagine + 2-oxoglutarate + O2 = peptidyl 3-hydroxy-L-asparagine + succinate + CO2.","definition_xrefs":["PMID:12215170","GOC:reh","RHEA:54260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140096","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"[protein]-asparagine 3-dioxygenase activity","secondary_identifiers":["GO:0102113"],"synonyms":[{"name":"hypoxia-inducible factor-asparagine oxygenase activity","type":"narrow"},{"name":"peptidyl-asparagine 3-dioxygenase activity","type":"exact"}],"termid":"GO:0036140"}


id: MONDO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes in the colon region of the large intestine (intestine, large).","definition_xrefs":["MESH:D003108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic disorder","secondary_identifiers":["MEDGEN:1049","SCTID:128524007","UMLS:C0009373","DOID:5353"],"synonyms":[{"name":"colon disease","type":"exact"},{"name":"colon disease or disorder","type":"exact"},{"name":"colon disorder","type":"exact"},{"name":"disease of colon","type":"exact"},{"name":"disease or disorder of colon","type":"exact"},{"name":"disorder of colon","type":"exact"}],"termid":"MONDO:0003409","xrefs":{"Monarch":{"xref_id":"0003409"}}}


id: MONDO:0017850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sirenomelia is a rare, genetic, developmental defect during embryogenesis disorder characterized by fusion of the lower limbs and associated with some degree of lower extremity reduction and persistent vitelline artery. Patients also present severe malformations of the musculoskeletal system (e.g. sacral agenesis), as well as the urogenital and lower gastrointestinal tracts (e.g. renal agenesis, absent bladder, rectal/anal atresia, and absent internal genitalia). Most cases are stillborn, or die during, or shortly after, birth.","definition_xrefs":["Orphanet:3169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial caudal dysgenesis","termid":"MONDO:0010831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirenomelia","secondary_identifiers":["UMLS:C0037205","NCIT:C118455","GARD:7652","NORD:1720","icd11.foundation:473306797","MedDRA:10049216","MEDGEN:52357","SCTID:67254002"],"synonyms":[{"name":"Fused legs and feet","type":"related"},{"name":"Sirenomelus","type":"related"},{"name":"mermaid malformation","type":"related"},{"name":"mermaid syndrome","type":"related"},{"name":"sirenomelia sequence","type":"related"},{"name":"symmelia","type":"exact"}],"termid":"MONDO:0017850","xrefs":{"Monarch":{"xref_id":"0017850"}}}


id: PR:Q09830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G8.04 gene.","definition_xrefs":["UniProtKB:Q09830","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C4G8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.04","synonyms":[{"name":"Spom972h-SPAC4G8.04","type":"exact"}],"termid":"PR:Q09830"}


id: PBO:0087355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor associated with the spliceosome; contains a U-box, a motif found in a class of ubiquitin ligases, and a WD40 domain; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087355"}


id: PBO:0065739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein 4","termid":"PBO:0065739"}


id: PBO:0076605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 24","termid":"PBO:0076605"}


id: SO:0000547
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome generated by recombination between two inversions; there is a duplication at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_bipartite_duplication","synonyms":[{"name":"inversion derived bipartite duplication","type":"exact"}],"termid":"SO:0000547"}


id: PBO:0031648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G2_phase_progression","termid":"PBO:0031648"}


id: MONDO:0700078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast carcinoma which is positive for expression of estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2).","direct_ancestors":[{"relation_name":"is_a","term_name":"progesterone-receptor positive breast cancer","termid":"MONDO:0000615"},{"relation_name":"is_a","term_name":"HER2 positive breast carcinoma","termid":"MONDO:0006244"},{"relation_name":"is_a","term_name":"estrogen-receptor positive breast cancer","termid":"MONDO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"triple-positive breast carcinoma","secondary_identifiers":["NCIT:C118311","MEDGEN:1825949","UMLS:C5243562"],"synonyms":[{"name":"HR-positive HER2 positive breast cancer","type":"exact"},{"name":"hormone receptor positive her2 positive breast cancer","type":"exact"},{"name":"triple positive breast cancer","type":"exact"}],"termid":"MONDO:0700078","xrefs":{"Monarch":{"xref_id":"0700078"}}}


id: GO:0044678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that in Methanobacterium thermoautotrophicum is composed of six subunits, and in Methanosarcina barkeri contains is composed of either two subunits or nine subunits. Catalyzes the conversion of coenzyme B, coenzyme M, and methanophenazine to form N-{7-[(2-sulfoethyl)dithio]heptanoyl}-3-O-phospho-L-threonine and dihydromethanophenazine.","definition_xrefs":["PMID:9063468","PMID:8119281","PMID:8174566","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CoB-CoM heterodisulfide reductase complex","synonyms":[{"name":"coenzyme M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase complex","type":"exact"},{"name":"hydrogen:coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide oxidoreductase complex","type":"exact"}],"termid":"GO:0044678"}


id: PR:Q9HDU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.06c","synonyms":[{"name":"Spom972h-SPBPB2B2.06c","type":"exact"}],"termid":"PR:Q9HDU9"}


id: PBO:0082792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U1 snRNP complex required for pre-mRNA splicing; putative ortholog of human U1C protein, which is involved in formation of a complex between U1 snRNP and the pre-mRNA 5' splice site","termid":"PBO:0082792"}


id: MONDO:0016448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthoma elasticum-like papillary dermal elastolysis (PXE-PDE) is a rare, acquired, idiopathic dermal tissue disorder characterized by numerous, asymptomatic, 2-3 mm, yellowish, non-follicular papules that tend to converge into cobblestone-like plaques which are distributed symmetrically over the posterior neck, supraclavicular region, axillae, and sometimes abdomen. Unlike PXE, these skin lesions show select elimination (absence or marked loss) of elastic fibers in the papillary dermis and there is no systemic involvement.","definition_xrefs":["Orphanet:228293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthoma elasticum-like papillary dermal elastolysis","secondary_identifiers":["GARD:20588","MEDGEN:1638395","icd11.foundation:704601885","UMLS:C4049455","SCTID:764105002"],"synonyms":[{"name":"PXE-PDE","type":"exact"},{"name":"PXE-like papillary dermal elastolysis","type":"exact"}],"termid":"MONDO:0016448","xrefs":{"Monarch":{"xref_id":"0016448"}}}


id: MONDO:0011503
data:
  {"annotated_genes":["SJAG_02148","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85922,85923],"is_not":false,"summary":null,"term":"MONDO:0011503"}]},"cv_name":"mondo","definition":"Decreased activity of hexose-6-phosphatase due to autosomal recessive mutation(s) in the H6PD gene. This enzyme is necessary to generate NADPH, a cofactor in the 11-beta-hydroxysteroid dehydrogenase pathway required for conversion of cortisone to cortisol. The condition is characterized by hyperandrogenism as a result of increased adrenocorticotropic hormone stimulation of the adrenal gland due to failure of cortisol-mediated down-regulation, and is clinically indistinguishable from 11-beta HSD type 1 deficiency.","definition_xrefs":["NCIT:C131849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortisone reductase deficiency","termid":"MONDO:0000193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"cortisone reductase deficiency 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15375","DOID:0090141","MEDGEN:764630","UMLS:C3551716","OMIM:604931"],"synonyms":[{"name":"CORTRD1","type":"exact"},{"name":"H6PD cortisone reductase deficiency","type":"exact"},{"name":"apparent cortisone reductase deficiency","type":"exact"},{"name":"cortisone reductase deficiency 1","type":"exact"},{"name":"cortisone reductase deficiency caused by mutation in H6PD","type":"exact"},{"name":"cortisone reductase deficiency type 1","type":"exact"},{"name":"hexose-6-phosphate dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0011503","terms_by_termid":{"MONDO:0011503":null},"xrefs":{"Monarch":{"xref_id":"0011503"}}}


id: GO:0099502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulatory process by which increased cytosolic calcium levels lead to the the fusion of synaptic vesicles with the presynaptic active zone membrane by bringing primed synaptic vesicle membrane into contact with membrane presynaptic active zone membrane.","definition_xrefs":["PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031632"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}


id: PBO:0061732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 5","termid":"PBO:0061732"}


id: GO:1902728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["PMID:23212449","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle satellite cell proliferation","termid":"GO:1902724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth factor dependent skeletal muscle satellite cell proliferation","termid":"GO:1902728"}


id: PBO:0039277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 6, pseudogene","termid":"PBO:0039277"}


id: GO:0097118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:12796785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"postsynaptic membrane assembly","termid":"GO:0097104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"neuroligin clustering involved in postsynaptic membrane assembly","synonyms":[{"name":"Nlgn clustering","type":"broad"},{"name":"neuroligin clustering","type":"broad"},{"name":"postsynaptic neuroligin clustering","type":"exact"}],"termid":"GO:0097118"}


id: GO:0005165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neurotrophin receptor binding","synonyms":[{"name":"neurotrophin","type":"narrow"},{"name":"neurotrophin receptor ligand","type":"narrow"}],"termid":"GO:0005165"}


id: PBO:0062437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 101 pseudogene","termid":"PBO:0062437"}


id: GO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil degranulation","synonyms":[{"name":"down regulation of eosinophil degranulation","type":"exact"},{"name":"down-regulation of eosinophil degranulation","type":"exact"},{"name":"downregulation of eosinophil degranulation","type":"exact"},{"name":"inhibition of eosinophil degranulation","type":"narrow"},{"name":"negative regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043310"}


id: MONDO:0011455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly, familial, with cleft palate and cerebellar hypoplasia","secondary_identifiers":["MESH:C565781","OMIM:604382","UMLS:C1858419","MEDGEN:348938"],"synonyms":[{"name":"lissencephaly, familial, with cleft palate and cerebellar hypoplasia","type":"exact"}],"termid":"MONDO:0011455","xrefs":{"Monarch":{"xref_id":"0011455"}}}


id: PR:O60074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- did2 gene.","definition_xrefs":["UniProtKB:O60074","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting-associated protein 46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.12","synonyms":[{"name":"Spom972h-did2","type":"exact"},{"name":"charged multivesicular body protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"doa4-independent degradation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60074"}


id: GO:0033440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ACG codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033440"}


id: GO:0050896
data:
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id: GO:1905287
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id: GO:1990172
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id: PBO:0088646
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id: MONDO:0054836
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete parkinsonism-dystonia, infantile, 2 (obsolete MONDO:0054836)","termid":"MONDO:0054836","xrefs":{"Monarch":{"xref_id":"0054836"}}}


id: SO:0000501
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse_Hoogsteen_base_pair","synonyms":[{"name":"reverse Hoogsteen base pair","type":"exact"}],"termid":"SO:0000501"}


id: PBO:0077513
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id: GO:0008667
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id: PBO:0030422
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id: PBO:0056406
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 4","termid":"PBO:0056406"}


id: PBO:0031911
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-threonyl-carbamoyl-adenosine (t6A) Sua5 (predicted)","termid":"PBO:0031911"}


id: PBO:0028411
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id: FYPO:0006553
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id: FYPO:0003977
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id: PBO:0071194
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id: GO:0080188
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id: GO:0007535
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id: GO:0018421
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of N-acetylglucosamine-1-phosphate to a serine residue in a protein.","definition_xrefs":["GOC:mah","PMID:9353330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine:serine-protein N-acetylglucosamine-1-phosphotransferase activity","termid":"GO:0018421"}


id: POMBASE_GENE_EX_REL:in_presence_of
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id: MONDO:0800261
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id: MONDO:0007458
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id: GO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast fate commitment","synonyms":[{"name":"metanephros interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072260"}


id: GO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"},{"relation_name":"is_a","term_name":"auxin catabolic process","termid":"GO:0009852"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid catabolic process","synonyms":[{"name":"IAA catabolic process","type":"exact"},{"name":"indole acetic acid catabolic process","type":"exact"},{"name":"indole acetic acid catabolism","type":"exact"},{"name":"indoleacetic acid breakdown","type":"exact"},{"name":"indoleacetic acid catabolism","type":"exact"},{"name":"indoleacetic acid degradation","type":"exact"}],"termid":"GO:0042437"}


id: FYPO:0005046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation. Although one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated, mitotic sister chromatid segregation does eventually go on to complete separation of chromosomes.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"has_part","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"lagging mitotic chromosomes, with complete sister chromatid separation","termid":"FYPO:0004101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000054","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of mitotic spindle elongation","synonyms":[{"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of spindle elongation during mitotic cell cycle","type":"related"},{"name":"lagging mitotic chromosomes, with complete sister chromatid separation and decreased spindle elongation rate","type":"exact"},{"name":"lagging mitotic chromosomes, with complete sister chromatid separation, and decreased rate of mitotic spindle elongation","type":"exact"},{"name":"lagging mitotic sister chromatids, with complete sister chromatid separation, and decreased rate of mitotic spindle elongation","type":"exact"}],"termid":"FYPO:0005046"}


id: PBO:0005246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug123","termid":"PBO:0005246"}


id: PBO:0085382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter mediates export of many different organic anions including oligomycin; homolog of human cystic fibrosis transmembrane receptor (CFTR)","termid":"PBO:0085382"}


id: GO:0070819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoporphyrinogen IX + menaquinone = protoporphyrin IX + reduced menaquinone.","definition_xrefs":["PMID:19583219","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"},{"relation_name":"is_a","term_name":"protoporphyrinogen oxidase activity","termid":"GO:0070818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"menaquinone-dependent protoporphyrinogen oxidase activity","synonyms":[{"name":"protoporphyrinogen-IX:menaquinone oxidoreductase activity","type":"exact"}],"termid":"GO:0070819"}


id: FYPO:0001134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 18S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mature 18S rRNA level","synonyms":[{"name":"normal 18S rRNA level","type":"broad"},{"name":"normal mature 18S rRNA accumulation","type":"related"},{"name":"normal mature 18S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 18S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 18S rRNA transcript level","type":"exact"}],"termid":"FYPO:0001134"}


id: PBO:0048965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1","termid":"PBO:0048965"}


id: GO:0060113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation","synonyms":[{"name":"inner ear hair cell differentiation","type":"exact"}],"termid":"GO:0060113"}


id: GO:1902532
data:
  {"annotated_genes":["SJAG_00975","SJAG_03089","SJAG_01184","SJAG_01790","SJAG_03681","SJAG_00991","SJAG_02233","SJAG_05346","SJAG_03185","SJAG_00457","SJAG_04943","SJAG_03263","SJAG_00229","SJAG_01297","SJAG_04259","SJAG_03974","SJAG_00824","SJAG_05000","SJAG_02379","SJAG_00526","SJAG_04462","SJAG_06270","SJAG_04522","SJAG_00875","SJAG_03799","SJAG_02858","SJAG_04249","SJAG_03592","SJAG_00289","SJAG_03486","SJAG_04206","SJAG_01464","SJAG_02000","SJAG_00642","SJAG_00209","SJAG_03353","SJAG_01114","SJAG_02169","SJAG_02013","SJAG_00169","SJAG_04910","SJAG_00883","SJAG_02231","SJAG_01679","SJAG_03893","SJAG_02336","SJAG_01983","SJAG_00293","SJAG_01142","SJAG_04455","SJAG_01253","SJAG_02765","SJAG_03072","SJAG_04825","SJAG_03501","SJAG_02514","SJAG_01386","SJAG_02451","SJAG_03355","SJAG_03678","SJAG_03508","SJAG_03126","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91061,116202,104211,107548,108568,114574,99914,112269,114087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[101316,116430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[99765,104119,96184,107365,107926,118617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[94536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[95369,99767,117378,92001,96304,118618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[107454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[72516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[71917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[105364,73128,92070,99916,101596,107550,110480,91065,95971,93268,107856,107415,93802,93184,116205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[91577,106220,112021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[73526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[113465,99202,105455,88364,107466,99898,114282,109580,96430,80294,73959,73938,109983,114882,116431,116783,117342,118340,118532,103328,93673,101773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[116576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intracellular signal transduction.","definition_xrefs":["GOC:tb","GOC:TermGenie","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"negatively_regulates","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00642":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00991":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01679":null,"SJAG_01790":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02169":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02451":null,"SJAG_02514":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03799":null,"SJAG_03893":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05346":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intracellular signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0010741"],"synonyms":[{"name":"down regulation of intracellular signal transduction","type":"exact"},{"name":"down regulation of intracellular signal transduction pathway","type":"narrow"},{"name":"down regulation of intracellular signaling cascade","type":"narrow"},{"name":"down regulation of intracellular signaling chain","type":"exact"},{"name":"down regulation of intracellular signaling pathway","type":"related"},{"name":"down regulation of signal transduction via intracellular signaling cascade","type":"related"},{"name":"down regulation of signal transmission via intracellular cascade","type":"narrow"},{"name":"down-regulation of intracellular signal transduction","type":"exact"},{"name":"down-regulation of intracellular signal transduction pathway","type":"narrow"},{"name":"down-regulation of intracellular signaling cascade","type":"related"},{"name":"down-regulation of intracellular signaling chain","type":"exact"},{"name":"down-regulation of intracellular signaling pathway","type":"related"},{"name":"down-regulation of signal transduction via intracellular signaling cascade","type":"related"},{"name":"down-regulation of signal transmission via intracellular cascade","type":"related"},{"name":"downregulation of intracellular signal transduction","type":"exact"},{"name":"downregulation of intracellular signal transduction pathway","type":"narrow"},{"name":"downregulation of intracellular signaling cascade","type":"narrow"},{"name":"downregulation of intracellular signaling chain","type":"exact"},{"name":"downregulation of intracellular signaling pathway","type":"related"},{"name":"downregulation of signal transduction via intracellular signaling cascade","type":"related"},{"name":"downregulation of signal transmission via intracellular cascade","type":"narrow"},{"name":"inhibition of intracellular signal transduction","type":"narrow"},{"name":"inhibition of intracellular signal transduction pathway","type":"narrow"},{"name":"inhibition of intracellular signaling cascade","type":"narrow"},{"name":"inhibition of intracellular signaling chain","type":"narrow"},{"name":"inhibition of intracellular signaling pathway","type":"related"},{"name":"inhibition of signal transduction via intracellular signaling cascade","type":"related"},{"name":"inhibition of signal transmission via intracellular cascade","type":"narrow"},{"name":"negative regulation of intracellular protein kinase cascade","type":"exact"},{"name":"negative regulation of intracellular signal transduction pathway","type":"narrow"},{"name":"negative regulation of intracellular signaling cascade","type":"exact"},{"name":"negative regulation of intracellular signaling chain","type":"exact"},{"name":"negative regulation of intracellular signaling pathway","type":"related"},{"name":"negative regulation of signal transduction via intracellular signaling cascade","type":"related"},{"name":"negative regulation of signal transmission via intracellular cascade","type":"narrow"}],"termid":"GO:1902532","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0043409":null,"GO:0046580":null,"GO:0106057":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: PBO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B delta subunit (predicted)","termid":"PBO:0002439"}


id: CL:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A cell whose nucleus has two haploid genomes.","definition_xrefs":["FB:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diploid cell","termid":"CL:0000415"}


id: PBO:0046781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 2","termid":"PBO:0046781"}


id: MONDO:0014497
data:
  {"annotated_genes":["SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87051],"is_not":false,"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00301":null},"genotype_count":0,"is_obsolete":false,"name":"polyendocrine-polyneuropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616113","Orphanet:453533","GARD:17787","MEDGEN:863698","UMLS:C4015261"],"synonyms":[{"name":"PEPNS","type":"related"},{"name":"polyendocrine-polyneuropathy syndrome","type":"exact"}],"termid":"MONDO:0014497","terms_by_termid":{"MONDO:0014497":null},"xrefs":{"Monarch":{"xref_id":"0014497"}}}


id: PBO:0085666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleolar integrity and processing of pre-rRNA; has a role in processing rRNA for the 60S ribosome subunit; transcript is induced in response to cytotoxic stress but not genotoxic stress; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085666"}


id: PBO:0064204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAG1 zinc finger","termid":"PBO:0064204"}


id: FYPO:0006250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is abnormal. All tRNAs aminoacylation may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["GO:0006418","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal tRNA aminoacylation","synonyms":[{"name":"abnormal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"abnormal tRNA aminoacylation for protein translation","type":"exact"},{"name":"abnormal tRNA charging","type":"narrow"}],"termid":"FYPO:0006250"}


id: PBO:0088316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved membrane protein with Rossmann-like alpha/beta/alpha sandwich fold, conserved in fungi and protozoa","termid":"PBO:0088316"}


id: MONDO:0013995
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87389],"is_not":false,"summary":null,"term":"MONDO:0013995"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"},{"relation_name":"is_a","term_name":"familial intrahepatic cholestasis","termid":"MONDO:0017290"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis of pregnancy","termid":"MONDO:0100429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, intrahepatic, of pregnancy, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070229","MEDGEN:767155","GARD:15888","OMIM:614972","UMLS:C3554241"],"synonyms":[{"name":"ICP3","type":"related"},{"name":"cholestasis, intrahepatic, of pregnancy 3","type":"exact"},{"name":"cholestasis, intrahepatic, of pregnancy type 3","type":"exact"}],"termid":"MONDO:0013995","terms_by_termid":{"MONDO:0013995":null},"xrefs":{"Monarch":{"xref_id":"0013995"}}}


id: PBO:0030399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030399"}


id: PBO:0068085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 391","termid":"PBO:0068085"}


id: FYPO:0000198
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119657],"is_not":false,"summary":null,"term":"FYPO:0000198"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of actin cytoskeleton polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell polarity","termid":"FYPO:0000026"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0005568","FYPO:0004803","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal establishment or maintenance of actin cytoskeleton polarity during vegetative growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actin cytoskeleton polarisation during vegetative growth","type":"related"},{"name":"abnormal actin cytoskeleton polarization during vegetative growth","type":"related"},{"name":"abnormal establishment or maintenance of actin cytoskeleton polarity during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000198","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO_EXT:0000001":null}}


id: PBO:0039379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine monophosphate deaminase 2","termid":"PBO:0039379"}


id: MONDO:0044984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the nasolacrimal duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nasolacrimal duct disorder","secondary_identifiers":["MEDGEN:636806","SCTID:95767006","UMLS:C0521744"],"synonyms":[{"name":"disease of nasolacrimal duct","type":"exact"},{"name":"disease or disorder of nasolacrimal duct","type":"exact"},{"name":"disorder of nasolacrimal duct","type":"exact"},{"name":"nasolacrimal duct disease","type":"exact"},{"name":"nasolacrimal duct disease or disorder","type":"exact"}],"termid":"MONDO:0044984","xrefs":{"Monarch":{"xref_id":"0044984"}}}


id: GO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-16 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-16 production","termid":"GO:0032659"},{"relation_name":"positively_regulates","term_name":"interleukin-16 production","termid":"GO:0032619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-16 production","secondary_identifiers":["GO:0045377"],"synonyms":[{"name":"activation of interleukin-16 production","type":"narrow"},{"name":"positive regulation of IL-16 production","type":"exact"},{"name":"positive regulation of interleukin-16 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-16 production","type":"narrow"},{"name":"up regulation of interleukin-16 production","type":"exact"},{"name":"up-regulation of interleukin-16 production","type":"exact"},{"name":"upregulation of interleukin-16 production","type":"exact"}],"termid":"GO:0032739"}


id: MONDO:0060640
data:
  {"annotated_genes":["SJAG_02525"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85453],"is_not":false,"summary":null,"term":"MONDO:0060640"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02525":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1637443","UMLS:C4693390","DOID:0060934","OMIM:617862"],"synonyms":[{"name":"NEDMEBA","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy","type":"exact"}],"termid":"MONDO:0060640","terms_by_termid":{"MONDO:0060640":null},"xrefs":{"Monarch":{"xref_id":"0060640"}}}


id: PBO:0046053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 1","termid":"PBO:0046053"}


id: GO:0034117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one erythrocyte to one or more other erythrocytes via adhesion molecules.","definition_xrefs":["PMID:14631543","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"erythrocyte aggregation","synonyms":[{"name":"RBC aggregation","type":"exact"},{"name":"red blood cell aggregation","type":"exact"}],"termid":"GO:0034117"}


id: GO:0015481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch. This transporter is a porin so enables the energy independent passage of substances, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"maltose transporting porin activity","secondary_identifiers":["Wikipedia:Maltoporin"],"synonyms":[{"name":"maltoporin","type":"exact"}],"termid":"GO:0015481"}


id: PBO:0090364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Hba1","termid":"PBO:0090364"}


id: PBO:0028568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_chromosome_segregation","termid":"PBO:0028568"}


id: PBO:0038507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 2","termid":"PBO:0038507"}


id: PBO:0029887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_stress_granule_assembly","termid":"PBO:0029887"}


id: GO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005733)","synonyms":[{"name":"small nucleolar RNA","type":"exact"},{"name":"snoRNA","type":"exact"}],"termid":"GO:0005733"}


id: GO:0015548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of organomercurial compounds from one side of a membrane to the other. Organomercurial substances are any organic compound containing a mercury atom.","definition_xrefs":["GOC:ai","PMID:18793329"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercurial transmembrane transporter activity (obsolete GO:0015548)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"narrow"},{"name":"organomercurial transporter activity","type":"related"}],"termid":"GO:0015548"}


id: MONDO:0023161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocarditis that is caused by an infection with a viral agent.","definition_xrefs":["NCIT:C128381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"viral myocarditis","secondary_identifiers":["MEDGEN:547112","icd11.foundation:231270764","SCTID:89141000","UMLS:C0276138"],"synonyms":[{"name":"Viral Myocarditis","type":"related"},{"name":"Viral myocarditis","type":"related"},{"name":"viral myocarditis","type":"exact"}],"termid":"MONDO:0023161","xrefs":{"Monarch":{"xref_id":"0023161"}}}


id: PBO:0053261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 2","termid":"PBO:0053261"}


id: MONDO:0020220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneoiridogoniodysgenesis (obsolete MONDO:0020220)","secondary_identifiers":["Orphanet:98636"],"termid":"MONDO:0020220","xrefs":{"Monarch":{"xref_id":"0020220"}}}


id: PBO:0031255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_replication_initiation","termid":"PBO:0031255"}


id: PBO:0067771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 71","termid":"PBO:0067771"}


id: PBO:0066912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 213","termid":"PBO:0066912"}


id: PBO:0044268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 8","termid":"PBO:0044268"}


id: PBO:0065096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 3","termid":"PBO:0065096"}


id: PBO:0017603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit Slx1","termid":"PBO:0017603"}


id: PBO:0075299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous ovarian cancer associated RNA","termid":"PBO:0075299"}


id: PBO:0049029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 15 ligand","termid":"PBO:0049029"}


id: FYPO:0000209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"abnormal attachment of spindle microtubules to meiosis I kinetochore","type":"exact"},{"name":"abnormal kinetochore mono-orientation at meiosis I","type":"exact"},{"name":"abnormal kinetochore orientation at meiosis I","type":"exact"},{"name":"abnormal sister kinetochore mono-orientation","type":"exact"}],"termid":"FYPO:0000209"}


id: GO:0047284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl D-xylosyl phosphate + protein = dolichol-phosphate + D-xylosylprotein.","definition_xrefs":["EC:2.4.2.33","MetaCyc:2.4.2.33-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"dolichyl-xylosyl-phosphate-protein xylosyltransferase activity","secondary_identifiers":["RHEA:18361"],"synonyms":[{"name":"dolichyl-D-xylosyl-phosphate:protein D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047284"}


id: PBO:0049644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 47","termid":"PBO:0049644"}


id: PBO:0057038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR130A host gene","termid":"PBO:0057038"}


id: GO:2001073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"},{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cyclodextrin binding","termid":"GO:2001073"}


id: GO:0047963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + glycine = CoA + glycocholate.","definition_xrefs":["MetaCyc:GLYCINE-N-CHOLOYLTRANSFERASE-RXN","EC:2.3.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycine N-choloyltransferase activity","secondary_identifiers":["RHEA:14001"],"synonyms":[{"name":"BACAT activity","type":"related"},{"name":"BAT activity","type":"related"},{"name":"amino acid N-choloyltransferase activity","type":"related"},{"name":"bile acid-CoA:amino acid N-acyltransferase activity","type":"related"},{"name":"choloyl-CoA:glycine N-choloyltransferase activity","type":"related"},{"name":"cholyl-CoA glycine-taurine N-acyltransferase activity","type":"related"},{"name":"cholyl-CoA:taurine N-acyltransferase activity","type":"related"},{"name":"glycine--taurine N-acyltransferase activity","type":"related"}],"termid":"GO:0047963"}


id: GO:0009921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein complex associated with the plasma membrane of certain plant cells (e.g. root cortex, epidermal cells) that functions to transport auxin out of the cell.","definition_xrefs":["PMID:9843496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"auxin efflux carrier complex","termid":"GO:0009921"}


id: PBO:0048121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 2","termid":"PBO:0048121"}


id: PBO:0053370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 293","termid":"PBO:0053370"}


id: PBO:0053254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 6","termid":"PBO:0053254"}


id: MONDO:0100143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection that involves respiratory failure, septic shock, and/or multiple organ dysfunction.","gene_count":0,"genotype_count":0,"name":"obsolete critical COVID-19 infection (obsolete MONDO:0100143)","secondary_identifiers":["DOID:0081012"],"termid":"MONDO:0100143","xrefs":{"Monarch":{"xref_id":"0100143"}}}


id: MONDO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus persica.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete peach allergy (obsolete MONDO:0000785)","secondary_identifiers":["DOID:0060510"],"synonyms":[{"name":"Prunus persica allergic disease","type":"exact"},{"name":"Prunus persica caused allergic disease","type":"exact"},{"name":"Prunus persica fruit allergy","type":"exact"},{"name":"allergy of Prunus persica","type":"exact"}],"termid":"MONDO:0000785","xrefs":{"Monarch":{"xref_id":"0000785"}}}


id: GO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that modulates the frequency, rate or extent or transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0046019)","synonyms":[{"name":"regulation of transcription from Pol II promoter by pheromones","type":"exact"}],"termid":"GO:0046019"}


id: MONDO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus neoplasm that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"choroid plexus cancer","termid":"MONDO:0002681"},{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult choroid plexus neoplasm","secondary_identifiers":["UMLS:C0796430","DOID:3542","NCIT:C8568","MEDGEN:163268"],"synonyms":[{"name":"adult choroid plexus cancer","type":"related"},{"name":"adult choroid plexus neoplasm","type":"exact"},{"name":"adult choroid plexus tumor","type":"exact"},{"name":"adult choroid plexus tumour","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus neoplasm of adults","type":"exact"},{"name":"neoplasm of adult choroid plexus","type":"exact"},{"name":"neoplasm of the adult choroid plexus","type":"exact"},{"name":"tumor of adult choroid plexus","type":"exact"},{"name":"tumor of the adult choroid plexus","type":"exact"},{"name":"tumour of adult choroid plexus","type":"exact"},{"name":"tumour of the adult choroid plexus","type":"exact"}],"termid":"MONDO:0002683","xrefs":{"Monarch":{"xref_id":"0002683"}}}


id: PBO:0085436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; ribosome-bound Pub1p modulates stop codon decoding during translation termination","termid":"PBO:0085436"}


id: PBO:0083157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1","termid":"PBO:0083157"}


id: FYPO:0000343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of hydrogen sulfide released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of hydrogen sulfide in growth medium","synonyms":[{"name":"increased concentration of H2S in growth medium","type":"exact"},{"name":"increased hydrogen sulfide biosynthesis","type":"related"}],"termid":"FYPO:0000343"}


id: GO:0071282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(II) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron(II) ion","termid":"GO:0010040"},{"relation_name":"is_a","term_name":"cellular response to iron ion","termid":"GO:0071281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron(II) ion","synonyms":[{"name":"cellular response to iron(II)","type":"exact"}],"termid":"GO:0071282"}


id: PBO:0040317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit beta pseudogene 1","termid":"PBO:0040317"}


id: MONDO:0018520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of pancreas (obsolete MONDO:0018520)","secondary_identifiers":["Orphanet:424033"],"synonyms":[{"name":"rare pancreatic epithelial tumor","type":"exact"}],"termid":"MONDO:0018520","xrefs":{"Monarch":{"xref_id":"0018520"}}}


id: GO:0018343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a farnesyl group to a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenylation","termid":"GO:0018342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein farnesylation","secondary_identifiers":["GO:0018347"],"synonyms":[{"name":"C-terminal protein farnesylation","type":"narrow"},{"name":"protein amino acid farnesylation","type":"exact"}],"termid":"GO:0018343"}


id: PBO:0059152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 4","termid":"PBO:0059152"}


id: PBO:0013064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ergothioneine biosynthesis protein Egt2","termid":"PBO:0013064"}


id: MONDO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which the ocular image of an object as seen by one eye differs in size and shape from that seen by the other.","definition_xrefs":["MESH:D000839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"aniseikonia","secondary_identifiers":["EFO:1001266","MEDGEN:1943","ICD10CM:H52.32","icd11.foundation:1672014953","ICD9:367.32","DOID:0050304","UMLS:C0003078","SCTID:16059006"],"termid":"MONDO:0000309","xrefs":{"Monarch":{"xref_id":"0000309"}}}


id: PBO:0058357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4730","termid":"PBO:0058357"}


id: MONDO:0020693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of phosphorylase kinase deficiency caused by variants in PHKA2 or PHKG2 and characterized by hepatomegaly, growth retardation, and mild delay in motor development during childhood.","definition_xrefs":["Orphanet:264580"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to liver phosphorylase kinase deficiency","secondary_identifiers":["GARD:17261","UMLS:C2012260","MEDGEN:453209"],"termid":"MONDO:0020693","xrefs":{"Monarch":{"xref_id":"0020693"}}}


id: FYPO:0005098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal poly(A) polymerase activity","synonyms":[{"name":"abnormal PAP activity","type":"exact"},{"name":"abnormal polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"FYPO:0005098"}


id: PBO:0011978
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YFL046W","termid":"PBO:0011978"}


id: MONDO:0007587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"external auditory canal atresia-vertical talus-hypertelorism syndrome","secondary_identifiers":["UMLS:C1876181","MEDGEN:361813","GARD:4638","Orphanet:3023","OMIM:133705"],"synonyms":[{"name":"Rasmussen Johnsen Thomsen syndrome","type":"related"},{"name":"Rasmussen syndrome","type":"related"},{"name":"Rasmussen-Johnsen-Thomsen syndrome","type":"exact"},{"name":"external auditory canal, bilateral atresia of, with congenital vertical talus","type":"related"},{"name":"inherited congenital bilateral atresia of the external auditory canal, congenital bilateral vertical talus and increased interocular distance","type":"related"}],"termid":"MONDO:0007587","xrefs":{"Monarch":{"xref_id":"0007587"}}}


id: PR:O13930
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2 gene.","definition_xrefs":["UniProtKB:O13930","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rab guanine nucleotide exchange factor sec2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.10","synonyms":[{"name":"GDP-GTP exchange factor sec2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sec2","type":"exact"}],"termid":"PR:O13930"}


id: PBO:0001215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone Scm3","termid":"PBO:0001215"}


id: MONDO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Baraitser-Winter cerebrofrontofacial syndrome in which the cause of the disease is a mutation in the ACTB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Baraitser-Winter cerebrofrontofacial syndrome","termid":"MONDO:0017579"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Baraitser-Winter syndrome 1","secondary_identifiers":["OMIM:243310","UMLS:C1855722","MEDGEN:340943","GARD:15189","DOID:0081112"],"synonyms":[{"name":"ACTB Baraitser-Winter cerebrofrontofacial syndrome","type":"exact"},{"name":"ACTB-related BAFopathy","type":"exact"},{"name":"BRWS1","type":"related"},{"name":"Baraitser-WINTER syndrome 1","type":"related"},{"name":"Baraitser-Winter cerebrofrontofacial syndrome caused by mutation in ACTB","type":"exact"},{"name":"Baraitser-Winter syndrome 1","type":"exact"},{"name":"Baraitser-Winter syndrome type 1","type":"exact"},{"name":"Fryns-Aftimos syndrome","type":"exact"},{"name":"cerebrofrontofacial syndrome","type":"exact"},{"name":"cerebrooculofacial lymphatic syndrome","type":"related"},{"name":"chromosome 7P22 deletion syndrome","type":"related"},{"name":"intellectual disability with epilepsy and characteristic facies","type":"related"},{"name":"iris coloboma with ptosis, hypertelorism, and intellectual disability","type":"related"},{"name":"iris coloboma with ptosis, hypertelorism, and mental retardation","type":"related"},{"name":"mental retardation with epilepsy and characteristic facies","type":"related"},{"name":"pachygyria, intellectual disability, epilepsy, and characteristic facies","type":"related"},{"name":"pachygyria, mental retardation, epilepsy, and characteristic facies","type":"related"}],"termid":"MONDO:0009470","xrefs":{"Monarch":{"xref_id":"0009470"}}}


id: MONDO:0800066
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"Any skeletal dysplasia that is characterizedby polydactyly, syndactyly and triphalangism, where a digit has three phalanges instead of two.","definition_xrefs":["PMID:19125433","PMID:31633310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"syndactyly","termid":"MONDO:0021002"},{"relation_name":"is_a","term_name":"polydactyly","termid":"MONDO:0021003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"polydactyly-syndactyly-triphalangism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800066","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0800066"}}}


id: PBO:0066129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 8","termid":"PBO:0066129"}


id: GO:2000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of glucose","synonyms":[{"name":"regulation of glucose detection","type":"exact"},{"name":"regulation of glucose perception","type":"related"},{"name":"regulation of glucose sensing","type":"related"}],"termid":"GO:2000970"}


id: PBO:0073778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 11","termid":"PBO:0073778"}


id: PBO:0091811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER insertion of tail-anchored membrane proteins","termid":"PBO:0091811"}


id: PBO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-eMTOC_absent_from_cell","termid":"PBO:0035813"}


id: PBO:0004624
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.4","termid":"PBO:0004624"}


id: PBO:0046028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit epsilon","termid":"PBO:0046028"}


id: PBO:0091867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, S. japonicus protein (SJAG_00124) predicted on opposite strand, one is likely incorrect, similarity detected with tblastn (S. japonicus 4008650-4008727) in this frame","termid":"PBO:0091867"}


id: GO:0044807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage migration inhibitory factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage migration inhibitory factor production","synonyms":[{"name":"MIF production","type":"exact"}],"termid":"GO:0044807"}


id: PBO:0113540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar proteinase B yscB with H3 N-terminal endopeptidase activity; serine protease of subtilisin family; involved in protein degradation in vacuole; required for full protein degradation during sporulation; activity inhibited by Pbi2p; protein abundance increases in response to DNA replication stress; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway and via AP-3 pathway; PRB1 has a paralog, YSP3, that arose from the whole genome duplication","termid":"PBO:0113540"}


id: PBO:0078951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-1","termid":"PBO:0078951"}


id: PBO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 1","termid":"PBO:0062002"}


id: PBO:0078110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor associated transmembrane adaptor 1","termid":"PBO:0078110"}


id: PBO:0088362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(37)-N(1))-methyltransferase activity Trm5","termid":"PBO:0088362"}


id: GO:0102639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 13-desoxypaxilline + NADPH + O2 + H+ = paspalicine + NADP + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete paspalicine synthase activity (obsolete GO:0102639)","termid":"GO:0102639"}


id: PR:P40849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:MSY","UniProtKB:P40849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm3","termid":"PR:000025005"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.03","synonyms":[{"name":"Spom972h-mfm3","type":"exact"}],"termid":"PR:P40849"}


id: GO:0009147
data:
  {"annotated_genes":["SJAG_05024","SJAG_03708","SJAG_04665","SJAG_03676","SJAG_04627","SJAG_04657","SJAG_02887","SJAG_04487","SJAG_00533","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[64618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[93310,68210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[92777,68983,71371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[79815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[107577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[64617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00885":null,"SJAG_02887":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009147","terms_by_termid":{"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046081":null}}


id: PBO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 42","termid":"PBO:0071201"}


id: PBO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Ucp6","termid":"PBO:0001768"}


id: SO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An A box within an RNA polymerase III type 2 promoter.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"A_box","termid":"SO:0000619"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box_type_2","synonyms":[{"name":"A box type 2","type":"related"}],"termid":"SO:0001676"}


id: GO:0035800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a deubiquitinase.","definition_xrefs":["GOC:sart","ISBN:0120793709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140677","GO:0030234"],"is_obsolete":false,"name":"deubiquitinase activator activity","termid":"GO:0035800"}


id: MONDO:1011819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic myelogenous leukemia, non-human animal","secondary_identifiers":["OMIA:001513"],"termid":"MONDO:1011819","xrefs":{"Monarch":{"xref_id":"1011819"}}}


id: GO:0030014
data:
  {"annotated_genes":["SJAG_00343","SJAG_04407","SJAG_00285","SJAG_01944","SJAG_02540","SJAG_01053","SJAG_03597","SJAG_03883","SJAG_04350"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75884,116899,94668,70521,74981,90124,74128,74655,92838],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030015"}]},"cv_name":"cellular_component","definition":"The Ccr4-Not complex is an eukaryotically conserved deadenylase that can initiate cytoplasmic mRNA decay, and reduce translation by releasing poly(A)-binding protein (Pab1/PABPC1). Ccr4-Not contains seven core subunits, including two poly(A)-specific exonucleases, Ccr4/CNOT6/CNOT6L and Caf1/Pop2/CNOT7/CNOT8.","definition_xrefs":["PMID:11239395","PMID:22785621","GOC:sart","PMID:30601114","PMID:11113136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_01053":null,"SJAG_01944":null,"SJAG_02540":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04350":null,"SJAG_04407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CCR4-NOT complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030014","terms_by_termid":{"GO:0030015":null}}


id: GO:1902814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10499580","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902814)","synonyms":[{"name":"activation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"activation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"positive regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"positive regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"upregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902814"}


id: PBO:0066382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin pseudogene 2","termid":"PBO:0066382"}


id: GO:0051206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving silicates, the salts of silicic acids. Silicates are usually composed of silicon and oxygen (Si[x]O[y]), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"silicate metabolic process","synonyms":[{"name":"silicate metabolism","type":"exact"}],"termid":"GO:0051206"}


id: FYECO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the presence of one or more substances in a limited amount.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical added or excluded","termid":"FYECO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping limited","termid":"FYECO:0000011"}


id: PBO:0056738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase type 1D, mitochondrial","termid":"PBO:0056738"}


id: GO:0009460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome containing noncovalently bound protoheme (iron protoporphyrin IX; heme b).","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b (obsolete GO:0009460)","synonyms":[{"name":"cytochrome b","type":"exact"}],"termid":"GO:0009460"}


id: PBO:0014600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triman, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014600"}


id: GO:0032242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside transport","termid":"GO:0032242"}


id: PBO:0041064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF2 RNA polymerase III transcription initiation factor subunit","termid":"PBO:0041064"}


id: MOD:00286
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0281","Unimod:424#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-cystein-S-yl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:00286"}


id: PBO:0076415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 8","termid":"PBO:0076415"}


id: GO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGTP metabolic process","synonyms":[{"name":"dGTP metabolism","type":"exact"}],"termid":"GO:0046070"}


id: GO:0035378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which carbon dioxide (CO2) is transported across a membrane.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon dioxide transport","termid":"GO:0015670"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"carbon dioxide transmembrane transport","synonyms":[{"name":"carbon dioxide membrane transport","type":"exact"}],"termid":"GO:0035378"}


id: GO:0097593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the ventral disc of Giardia species (trophozoite stage) consisting of a spiral array of microtubules linked to the ventral membrane. These microtubules form the base of the ventral disc dorsal microribbons that extend nearly perpendicular from the membrane.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc microtubule array","synonyms":[{"name":"spiral microtubule array","type":"broad"},{"name":"ventral disc spiral microtubule array","type":"exact"},{"name":"ventral disk microtubule array","type":"related"}],"termid":"GO:0097593"}


id: PBO:0003406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein Ecl2","termid":"PBO:0003406"}


id: PBO:0030559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import","termid":"PBO:0030559"}


id: PBO:0083602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; identified by homology","termid":"PBO:0083602"}


id: PBO:0052259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 1B","termid":"PBO:0052259"}


id: MONDO:1012216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"platelet function defect, non-human animal","termid":"MONDO:1011691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet function defect, cattle","secondary_identifiers":["OMIA:000803-9913"],"termid":"MONDO:1012216","xrefs":{"Monarch":{"xref_id":"1012216"}}}


id: PBO:0043973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase","termid":"PBO:0043973"}


id: PBO:0091839
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"do not confuse with Sty1","termid":"PBO:0091839"}


id: PATO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer being divided into four parts.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadripartite","termid":"PATO:0002447"}


id: PBO:0046944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member A","termid":"PBO:0046944"}


id: PBO:0074251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B1","termid":"PBO:0074251"}


id: GO:1901162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound biosynthetic process","synonyms":[{"name":"primary amino compound anabolism","type":"exact"},{"name":"primary amino compound biosynthesis","type":"exact"},{"name":"primary amino compound formation","type":"exact"},{"name":"primary amino compound synthesis","type":"exact"}],"termid":"GO:1901162"}


id: PBO:0031619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transposition","termid":"PBO:0031619"}


id: GO:0030952
data:
  {"annotated_genes":["SJAG_00229","SJAG_00152","SJAG_01613","SJAG_03540","SJAG_02624","SJAG_02392","SJAG_00661","SJAG_03748","SJAG_00030","SJAG_04461","SJAG_00424","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101594],"is_not":false,"summary":null,"term":"GO:0030952"},{"annotations":[89776,100498,88808,99650,73610,111073,105678,96181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030950"},{"annotations":[79823,99545,77372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030951"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00229":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_01613":null,"SJAG_02392":null,"SJAG_02624":null,"SJAG_02838":null,"SJAG_03540":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoskeleton polarization","type":"related"}],"termid":"GO:0030952","terms_by_termid":{"GO:0030950":null,"GO:0030951":null,"GO:0030952":null}}


id: PATO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A medium brown color with a metallic sheen, resembles the actual alloy bronze.","definition_xrefs":["PATO:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronze","termid":"PATO:0002363"}


id: GO:0072701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bismuth (Bi) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to bismuth","termid":"GO:0072700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bismuth","synonyms":[{"name":"cellular response to bismuth ion","type":"exact"}],"termid":"GO:0072701"}


id: PBO:0057762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2052","termid":"PBO:0057762"}


id: PBO:0113496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has paralog ANB1 that arose from whole genome duplication; in humans EIF5A variants cause a disorder characterized by variable combinations of developmental delay, microcephaly, micrognathia and dysmorphism; human EIF5A complements inviability of yeast hyp2 anb1 double null mutant","termid":"PBO:0113496"}


id: FYECO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Both M-factor and P-factor, endogenously produced by cells, were present in the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000055 M and P factor produced (obsolete FYECO:0000055)","synonyms":[{"name":"presence of M-factor and P-factor","type":"exact"},{"name":"presence of mating pheromones","type":"exact"}],"termid":"FYECO:0000055"}


id: PBO:0063150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POZ/BTB and AT hook containing zinc finger 1","termid":"PBO:0063150"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: PBO:0075517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle apparatus coiled-coil protein 1","termid":"PBO:0075517"}


id: FYPO:0006864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to streptonigrin. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to streptonigrin (obsolete FYPO:0006864)","synonyms":[{"name":"cut during cellular response to rufocromomycin","type":"exact"},{"name":"cut during cellular response to streptonigrin during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to streptonigrin during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to streptonigrin","type":"exact"}],"termid":"FYPO:0006864"}


id: PBO:0061962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 41 pseudogene","termid":"PBO:0061962"}


id: MONDO:0006778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign melanocytic nevus with a halo appearance.","definition_xrefs":["NCIT:C7602"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"halo nevus","secondary_identifiers":["MESH:D055882","EFO:1000958","ICD9:709.09","SCTID:398028009","MedDRA:10062794","MEDGEN:141636","ICDO:8723/0","UMLS:C0474824"],"synonyms":[{"name":"halo nevi","type":"exact"},{"name":"leukoderma acquisitum Centrifugum of Sutton","type":"related"}],"termid":"MONDO:0006778","xrefs":{"Monarch":{"xref_id":"0006778"}}}


id: GO:0033935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic links in oligoxyloglucans so as to remove successive isoprimeverose (i.e. alpha-xylo-1,6-beta-D-glucosyl-) residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oligoxyloglucan beta-glycosidase activity","secondary_identifiers":["MetaCyc:3.2.1.120-RXN"],"synonyms":[{"name":"isoprimeverose-producing oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan xyloglucohydrolase activity","type":"related"}],"termid":"GO:0033935"}


id: PBO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 1","termid":"PBO:0048135"}


id: PBO:0045172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 6","termid":"PBO:0045172"}


id: PBO:0044649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 1","termid":"PBO:0044649"}


id: GO:0050613
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80662],"is_not":false,"summary":null,"term":"GO:0050613"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol = NADPH + H+ + 4,4-dimethyl-5-alpha-cholesta-8,14,24-trien-3-beta-ol.","definition_xrefs":["EC:1.3.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"Delta14-sterol reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:18561","GO:0000251","MetaCyc:RXN66-14","Reactome:R-HSA-194674","Reactome:R-HSA-194698"],"synonyms":[{"name":"4,4-dimethyl-5alpha-cholesta-8,24-dien-3beta-ol:NADP+ delta14-oxidoreductase activity","type":"related"},{"name":"C-14 sterol reductase activity","type":"exact"},{"name":"D14-sterol reductase activity","type":"exact"},{"name":"sterol C-14 reductase activity","type":"exact"},{"name":"sterol C14-reductase activity","type":"related"}],"termid":"GO:0050613","terms_by_termid":{"GO:0050613":null}}


id: PBO:0056269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2 activating motif and SAP domain containing transcriptional regulator","termid":"PBO:0056269"}


id: GO:0004070
data:
  {"annotated_genes":["SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72275],"is_not":false,"summary":null,"term":"GO:0004070"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + H+ + phosphate.","definition_xrefs":["EC:2.1.3.2","RHEA:20013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"aspartate carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01397","Reactome:R-HSA-73573","MetaCyc:ASPCARBTRANS-RXN"],"synonyms":[{"name":"ATCase activity","type":"related"},{"name":"L-aspartate transcarbamoylase activity","type":"related"},{"name":"L-aspartate transcarbamylase activity","type":"related"},{"name":"aspartate carbamyltransferase activity","type":"related"},{"name":"aspartate transcarbamoylase activity","type":"related"},{"name":"aspartate transcarbamylase activity","type":"related"},{"name":"aspartic acid transcarbamoylase activity","type":"related"},{"name":"aspartic carbamyltransferase activity","type":"related"},{"name":"aspartic transcarbamylase activity","type":"related"},{"name":"carbamoyl-phosphate:L-aspartate carbamoyltransferase activity","type":"related"},{"name":"carbamoylaspartotranskinase activity","type":"related"},{"name":"carbamylaspartotranskinase activity","type":"related"}],"termid":"GO:0004070","terms_by_termid":{"GO:0004070":null}}


id: MONDO:0800128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined immunodeficiency due to a deficiency in the POLE2 gene.","definition_xrefs":["PMID:26365386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to POLE2 deficiency","termid":"MONDO:0800128","xrefs":{"Monarch":{"xref_id":"0800128"}}}


id: MONDO:0002771
data:
  {"annotated_genes":["SJAG_02194","SJAG_01836","SJAG_03125","SJAG_00566","SJAG_05979","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[86916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[86685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[85646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[87479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"}]},"cv_name":"mondo","definition":"Chronic progressive interstitial lung disorder characterized by the replacement of the lung tissue by connective tissue, leading to progressive dyspnea, respiratory failure, or right heart failure. Causes include chronic inflammatory processes, exposure to environmental irritants, radiation therapy, autoimmune disorders, certain drugs, or it may be idiopathic (no identifiable cause).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_03125":null,"SJAG_03855":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary fibrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3770","MESH:D011658","NCIT:C26869","UMLS:C0034069","MEDGEN:11028","SCTID:51615001","EFO:0009448"],"synonyms":[{"name":"fibrosis of lung","type":"exact"},{"name":"pulmonary interstitial fibrosis","type":"exact"}],"termid":"MONDO:0002771","terms_by_termid":{"MONDO:0013878":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0002771"}}}


id: GO:0097509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated guanine where the resulting base (oxanine) is generated by NO- or HNO2-induced nitrosative deamination.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"oxanine DNA N-glycosylase activity","synonyms":[{"name":"oxanine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097509"}


id: GO:0071065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular cell adhesion molecule-1.","definition_xrefs":["PMID:10209034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex","synonyms":[{"name":"ITGA9-ITGB1-VCAM1 complex","type":"narrow"}],"termid":"GO:0071065"}


id: GO:0009378
data:
  {"annotated_genes":["SJAG_05105","SJAG_02294","SJAG_03898","SJAG_02690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71130,78327,78475,79801],"is_not":false,"summary":null,"term":"GO:0009378"}]},"cv_name":"molecular_function","definition":"Unwinding a DNA helix of DNA containing four-way junctions, including Holliday junctions, driven by ATP hydrolysis.","definition_xrefs":["PMID:22723423","GOC:al","PMID:9442895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02294":null,"SJAG_02690":null,"SJAG_03898":null,"SJAG_05105":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"four-way junction helicase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:1990163"],"synonyms":[{"name":"ATP-dependent Holliday junction helicase activity","type":"narrow"},{"name":"ATP-dependent four-way junction DNA helicase activity","type":"exact"},{"name":"ATP-dependent four-way junction helicase activity","type":"exact"},{"name":"Holliday junction helicase activity","type":"narrow"}],"termid":"GO:0009378","terms_by_termid":{"GO:0009378":null}}


id: GO:1904010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an Aroclor 1254 stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:18602130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Aroclor 1254","termid":"GO:1904010"}


id: PBO:0072121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 10","termid":"PBO:0072121"}


id: MONDO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 43","secondary_identifiers":["OMIM:618751","UMLS:C5231490","MEDGEN:1684830","GARD:18414","DOID:0111917"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 43","type":"related"},{"name":"SPGF43","type":"related"}],"termid":"MONDO:0032898","xrefs":{"Monarch":{"xref_id":"0032898"}}}


id: PR:000028945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase oxidized form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA/Ox+","pombase_gene_id":"SPAC29E6.05c","synonyms":[{"name":"MSRA/Ox+","type":"exact"},{"name":"PomBase_original_PRO_term_name: peptide methionine sulfoxide reductase oxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-MSRA/Ox+","type":"exact"}],"termid":"PR:000028945"}


id: FYPO:0006489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3-phosphate measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular phosphatidylinositol-3-phosphate level","synonyms":[{"name":"normal PI-3-P accumulation","type":"related"},{"name":"normal cellular PI(3)P level","type":"exact"},{"name":"normal cellular PI-3-P level","type":"exact"},{"name":"normal cellular phosphatidylinositol-3-phosphate level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylinositol-3-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006489"}


id: SO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a tmRNA (SO:0000584).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_primary_transcript","synonyms":[{"name":"10Sa RNA primary transcript","type":"related"},{"name":"ssrA RNA primary transcript","type":"related"},{"name":"tmRNA primary transcript","type":"exact"}],"termid":"SO:0000586"}


id: GO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate = ADP + 4,5-bisdiphosphoinositol-1D-myo-inositol (1,2,3,6)tetrakisphosphate, and ATP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:17412958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate 5-kinase activity","synonyms":[{"name":"IP7 5-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol heptakisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0033200"}


id: PBO:0060180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 1, cell surface associated","termid":"PBO:0060180"}


id: PATO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000172 relative yield (obsolete PATO:0000172)","termid":"PATO:0000172"}


id: PBO:0043300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 18 member B","termid":"PBO:0043300"}


id: MONDO:0013393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 7q11.23 microdeletion syndrome is a rare chromosomal anomaly characterized by epilepsy, neurodevelopmental disorder variably including developmental delays and intellectual disabilities of variable severity, learning disability and neurobehavioral abnormalities (autism spectrum disorder, hyperactivity, impulsivity, aggression, self-abusive behaviors, depression).","definition_xrefs":["Orphanet:254351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 7q11.23 microdeletion syndrome","secondary_identifiers":["GARD:17218","MEDGEN:462349","OMIM:613729","UMLS:C3150999"],"synonyms":[{"name":"chromosome 7q11.23 deletion syndrome, distal, 1.2-MB","type":"related"},{"name":"chromosome 7q11.23 deletion syndrome, distal, 1.2mb","type":"exact"},{"name":"distal chromosome 7Q11.23 deletion syndrome","type":"related"},{"name":"distal del(7)(q11.23)","type":"exact"},{"name":"distal monosomy 7q11.23","type":"exact"}],"termid":"MONDO:0013393","xrefs":{"Monarch":{"xref_id":"0013393"}}}


id: PBO:0111754
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR family","termid":"PBO:0111754"}


id: GO:0034057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Facilitates the displacement of one strand of an RNA-RNA duplex and its replacement with a different strand of higher complementarity.","definition_xrefs":["GOC:mcc","PMID:9769100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded RNA binding","termid":"GO:0003725"},{"relation_name":"is_a","term_name":"single-stranded RNA binding","termid":"GO:0003727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"RNA strand-exchange activity","termid":"GO:0034057"}


id: PBO:0074055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A34 and TMEM82 antisense RNA 1","termid":"PBO:0074055"}


id: PBO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 60, pseudogene","termid":"PBO:0044399"}


id: PBO:0091286
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not complement S. cerevisiae NRD1","termid":"PBO:0091286"}


id: PBO:0026837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G1_phase","termid":"PBO:0026837"}


id: FYPO:0007004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal in regions containing protein coding genes. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["GO:0005721","PMID:26518661","GO:0043486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased histone turnover at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone exchange at protein coding gene during mitotic cell cycle","type":"related"},{"name":"reduced histone exchange at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007004"}


id: GO:0048683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collateral sprouting of an intact axon as a result of injury to an axon.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:lm","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"regulates","term_name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collateral sprouting of intact axon in response to injury","termid":"GO:0048683"}


id: PBO:0085594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern","termid":"PBO:0085594"}


id: PBO:0078519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 9","termid":"PBO:0078519"}


id: PBO:0081853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 786","termid":"PBO:0081853"}


id: MONDO:1012338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency, non-human animal","termid":"MONDO:1011699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency, goat","secondary_identifiers":["OMIA:001235-9925"],"termid":"MONDO:1012338","xrefs":{"Monarch":{"xref_id":"1012338"}}}


id: FYPO:0002451
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002451","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0079503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 1","termid":"PBO:0079503"}


id: PBO:0029220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0029220"}


id: GO:0006383
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id: MOD:01006
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id: PR:O14110
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aminomethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.14","secondary_identifiers":["UniProtKB:O14110"],"synonyms":[{"name":"GCVT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMT","type":"exact"},{"name":"glycine cleavage system T protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14110"}


id: PBO:0111910
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  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0111910"}


id: GO:1902541
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A micropinocytosis which involves another organism.","definition_xrefs":["GOC:jl","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism micropinocytosis (obsolete GO:1902541)","termid":"GO:1902541"}


id: PBO:0004350
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm4 (predicted)","termid":"PBO:0004350"}


id: PR:Q9UTA8
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.10 gene.","definition_xrefs":["UniProtKB:Q9UTA8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like C25B8.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.10","synonyms":[{"name":"Spom972h-SPAC25B8.10","type":"exact"}],"termid":"PR:Q9UTA8"}


id: PBO:0051312
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-6 (pseudogene)","termid":"PBO:0051312"}


id: GO:1901981
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id: PBO:0076234
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id: FYPO:0004355
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id: PBO:0068039
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 344","termid":"PBO:0068039"}


id: PBO:0086109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for beta-1,6 glucan biosynthesis; mutations result in aberrant morphology and severe growth defects","termid":"PBO:0086109"}


id: PBO:0084579
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR100W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR098W","termid":"PBO:0084579"}


id: MONDO:0000654
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id: MONDO:1012116
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, cattle","secondary_identifiers":["OMIA:000527-9913"],"termid":"MONDO:1012116","xrefs":{"Monarch":{"xref_id":"1012116"}}}


id: PBO:0000306
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp3","termid":"PBO:0000306"}


id: GO:0009645
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.","definition_xrefs":["GOC:mtg_far_red","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low light intensity stimulus","termid":"GO:0009645"}


id: GO:2001000
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xylan catabolic process","synonyms":[{"name":"regulation of xylan breakdown","type":"exact"},{"name":"regulation of xylan catabolism","type":"exact"},{"name":"regulation of xylan degradation","type":"exact"}],"termid":"GO:2001000"}


id: MONDO:0004580
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id: PBO:0043042
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id: PBO:0090906
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id: SO:0001543
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id: PBO:0061991
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily C member 1","termid":"PBO:0061991"}


id: PBO:0090905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Fkh2","termid":"PBO:0090905"}


id: GO:0030118
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id: RO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x ends with y if and only if x has part y and the time point at which x ends is equivalent to the time point at which y ends. Formally: α(y) > α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_with","termid":"RO:0002230"}


id: PBO:0079565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2 like","termid":"PBO:0079565"}


id: PBO:0045269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 9","termid":"PBO:0045269"}


id: GO:0036134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H2 = 12-hydroxyheptadecatrienoic acid (HHT) + malonaldehyde (MDA).","definition_xrefs":["PMID:11297515","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"12-hydroxyheptadecatrienoic acid synthase activity","secondary_identifiers":["Reactome:R-HSA-2161613","RHEA:48644"],"synonyms":[{"name":"prostaglandin H2 degradation activity","type":"related"}],"termid":"GO:0036134"}


id: FYPO:0001768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"},{"relation_name":"is_a","term_name":"abolished tRNA modification","termid":"FYPO:0008344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished tRNA-Asp C38 methylation","synonyms":[{"name":"abolished tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"abolished tRNA-Asp methylation on C38","type":"exact"},{"name":"tRNA-Asp C38 methylation abolished","type":"exact"}],"termid":"FYPO:0001768"}


id: GO:0009310
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine breakdown","type":"exact"},{"name":"amine catabolism","type":"exact"},{"name":"amine degradation","type":"exact"}],"termid":"GO:0009310","terms_by_termid":{"GO:0009447":null}}


id: MONDO:0700024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 19 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 disorder","termid":"MONDO:0700024","xrefs":{"Monarch":{"xref_id":"0700024"}}}


id: PBO:0089268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6","termid":"PBO:0089268"}


id: GO:0018365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (protein)-L-serine = (protein)-D-serine.","definition_xrefs":["EC:5.1.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"protein-serine epimerase activity","secondary_identifiers":["RHEA:10660","MetaCyc:5.1.1.16-RXN"],"synonyms":[{"name":"protein-serine racemase activity","type":"related"}],"termid":"GO:0018365"}


id: SO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CGWGGWNGMM, bound by transcription factors related to RecA and found in promoters of genes expressed following several types of DNA damage or inhibition of DNA synthesis.","definition_xrefs":["PMID:11073995","PMID:8668127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE","synonyms":[{"name":"DNA damage response element","type":"exact"}],"termid":"SO:0001845"}


id: PBO:0032770
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possibly spliced to mug117, identical expression level?","termid":"PBO:0032770"}


id: MONDO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meningitis in which eosinophils predominate in the cerebrospinal fluid.","definition_xrefs":["NCIT:C128374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic meningitis","termid":"MONDO:0001007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophilic meningitis","secondary_identifiers":["UMLS:C0154652","DOID:10361","ICD9:322.1","SCTID:25671008","MEDGEN:509620"],"termid":"MONDO:0001015","xrefs":{"Monarch":{"xref_id":"0001015"}}}


id: PBO:0030248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cold","termid":"PBO:0030248"}


id: GO:0097310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first and second nucleotides of a 5'-capped mRNA.","definition_xrefs":["GOC:sp","PMID:20713356"],"gene_count":0,"genotype_count":0,"name":"obsolete cap2 mRNA methylation (obsolete GO:0097310)","synonyms":[{"name":"cap2 mRNA capping","type":"broad"}],"termid":"GO:0097310"}


id: PR:Q96WW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32H8.05 gene.","definition_xrefs":["UniProtKB:Q96WW3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0642 protein C32H8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.05","synonyms":[{"name":"Spom972h-SPBC32H8.05","type":"exact"}],"termid":"PR:Q96WW3"}


id: MONDO:0012108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by disproportionate early-onset dwarfism, bowing of the lower limbs, short, wide and stocky long bones with severe epiphyseal and metaphyseal changes, lumbar lordosis, hypoplastic iliac bones, flat ovoid vertebral bodies and normal hands.","definition_xrefs":["Orphanet:156728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, matrilin-3 type","secondary_identifiers":["OMIM:608728","SCTID:719166003","UMLS:C1837481","MEDGEN:325181","GARD:10611","icd11.foundation:1983063881","MESH:C563869"],"synonyms":[{"name":"SEMD MATN3-related","type":"related"},{"name":"SEMD, MATN3-related","type":"exact"},{"name":"SEMD, matrilin-3 type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia matrilin-3 related","type":"related"},{"name":"spondyloepimetaphyseal dysplasia matrilin-3 type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Borochowitz-Cormier-Daire type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, matrilin-3 related","type":"related"}],"termid":"MONDO:0012108","xrefs":{"Monarch":{"xref_id":"0012108"}}}


id: GO:2000774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular senescence.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular senescence","termid":"GO:2000772"},{"relation_name":"positively_regulates","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular senescence","termid":"GO:2000774"}


id: PBO:0090319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr102","termid":"PBO:0090319"}


id: PBO:0090947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane gluconate:proton symporter Ght3","termid":"PBO:0090947"}


id: PBO:0067389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 494, pseudogene","termid":"PBO:0067389"}


id: GO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the plasma membrane hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the plasma membrane when the entire ATP synthase is assembled. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) (obsolete GO:0045262)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0045262"}


id: PBO:0057873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-2","termid":"PBO:0057873"}


id: FYPO:0006469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total ncRNA or a specific ncRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mature ncRNA level","synonyms":[{"name":"normal mature ncRNA accumulation","type":"related"},{"name":"normal mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature ncRNA level during vegetative growth","type":"exact"},{"name":"normal mature ncRNA transcript level","type":"exact"},{"name":"normal mature non-coding RNA level","type":"exact"},{"name":"normal ncRNA level","type":"broad"}],"termid":"FYPO:0006469"}


id: GO:0100028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates conjugation with cellular fusion.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of conjugation with cellular fusion by transcription from RNA polymerase II promoter (obsolete GO:0100028)","termid":"GO:0100028"}


id: PBO:0089969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit, human ASCC1 ortholog","termid":"PBO:0089969"}


id: MONDO:1011867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal abiotrophy, non-human animal","secondary_identifiers":["OMIA:001164"],"termid":"MONDO:1011867","xrefs":{"Monarch":{"xref_id":"1011867"}}}


id: MONDO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polysyndactyly 4","termid":"MONDO:0008272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"polysyndactyly, bilateral","secondary_identifiers":["Orphanet:295161","icd11.foundation:622710483"],"synonyms":[{"name":"preaxial polydactyly type 4, bilateral","type":"exact"}],"termid":"MONDO:0017530","xrefs":{"Monarch":{"xref_id":"0017530"}}}


id: MONDO:1011822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell carcinoma of the digit, non-human animal","secondary_identifiers":["OMIA:001787"],"termid":"MONDO:1011822","xrefs":{"Monarch":{"xref_id":"1011822"}}}


id: FYPO:0004093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering is normal (i.e. indistinguishable from wild type). Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["GO:0045141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic telomere clustering","synonyms":[{"name":"normal bouquet formation","type":"exact"}],"termid":"FYPO:0004093"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: MONDO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","secondary_identifiers":["MEDGEN:1640532","GARD:16281","EFO:0009383","OMIM:617993","UMLS:C4693863"],"synonyms":[{"name":"HFTC2","type":"related"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","type":"exact"}],"termid":"MONDO:0060714","xrefs":{"Monarch":{"xref_id":"0060714"}}}


id: MONDO:0000649
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the sensory system","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sensory system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060116"],"synonyms":[{"name":"cancer of sensory system","type":"exact"},{"name":"malignant neoplasm of sensory system","type":"exact"},{"name":"malignant sensory system neoplasm","type":"exact"},{"name":"sensory system cancer","type":"exact"}],"termid":"MONDO:0000649","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0000649"}}}


id: MONDO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pityriasis rubra pilaris that occurs around the fifth or sixth decade of life.","direct_ancestors":[{"relation_name":"is_a","term_name":"pityriasis rubra pilaris","termid":"MONDO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"adult onset pityriasis rubra pilaris","synonyms":[{"name":"adult onset PRP","type":"exact"}],"termid":"MONDO:0100018","xrefs":{"Monarch":{"xref_id":"0100018"}}}


id: MONDO:1010011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, non-human animal","secondary_identifiers":["OMIA:000162"],"termid":"MONDO:1010011","xrefs":{"Monarch":{"xref_id":"1010011"}}}


id: PBO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Mdm31 (predicted)","termid":"PBO:0001246"}


id: PBO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; inhibits oxidative damage induced by amphotericin B; overexpression increases flocculation, biofilm formation, invasive and pseudohyphal growth; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; BSC2 has a paralog, IRC23, that arose from the whole genome duplication","termid":"PBO:0086043"}


id: GO:0016173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the formation of ice crystals.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ice nucleation inhibitor activity (obsolete GO:0016173)","synonyms":[{"name":"ice nucleation inhibitor activity","type":"exact"}],"termid":"GO:0016173"}


id: PBO:0046657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESF1 nucleolar pre-rRNA processing protein homolog","termid":"PBO:0046657"}


id: GO:0050909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of taste","secondary_identifiers":["Wikipedia:Taste","Reactome:R-HSA-9717189"],"synonyms":[{"name":"gustation","type":"exact"},{"name":"sense of taste","type":"exact"},{"name":"taste","type":"exact"},{"name":"taste perception","type":"exact"}],"termid":"GO:0050909"}


id: GO:0120273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a ciliary centrin arm, a rod-shaped protein complex containing Centrin4 protein that flanks the flagellum attachment zone (FAZ) filament and the quartet microtubules.","definition_xrefs":["GOC:krc","PMID:32675283","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"ciliary centrin arm assembly","synonyms":[{"name":"ciliary centrin arm formation","type":"related"}],"termid":"GO:0120273"}


id: GO:0008010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a larva. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of chitin-based larval cuticle","synonyms":[{"name":"structural constituent of larval cuticle","type":"broad"}],"termid":"GO:0008010"}


id: GO:0140566
data:
  {"annotated_genes":["SJAG_01601","SJAG_00545","SJAG_04574","SJAG_03916"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61562,99458],"is_not":false,"summary":null,"term":"GO:0140566"},{"annotations":[108240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990889"},{"annotations":[110813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061649"}]},"cv_name":"molecular_function","definition":"A chromatin adaptor activity that brings together a protein and a specific form of histone, either modified by a post-translational modification, or the unmodified form. Histone readers have roles in many processes, including in centromere function or in modulating the accessibility of cis-regulatory regions to the transcription machinery.","definition_xrefs":["PMID:11498575","PMID:31082667","PMID:34726351","PMID:25688442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00545":null,"SJAG_01601":null,"SJAG_03916":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"histone reader activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"epigenetic reader","type":"broad"},{"name":"histone reader","type":"exact"}],"termid":"GO:0140566","terms_by_termid":{"GO:0061649":null,"GO:0140566":null,"GO:1990889":null}}


id: GO:0051400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Bcl-2 homology (BH) protein domain. Bcl-2-related proteins share homology in one to four conserved regions designated the Bcl-2 homology (BH) domains BH1, BH2, BH3 and BH4. These domains contribute at multiple levels to the function of these proteins in cell death and survival. Anti-apoptotic members of the Bcl-2 family have four BH domains (BH1-BH4). Pro-apoptotic members have fewer BH domains.","definition_xrefs":["PMID:12133724","PMID:11048732","PMID:9704409","PMID:9020082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"BH domain binding","synonyms":[{"name":"Bcl-2 homology domain binding","type":"exact"}],"termid":"GO:0051400"}


id: PBO:0085283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane signal receptor for peroxisomal matrix proteins; receptor for the C-terminal tripeptide signal sequence (PTS1) of peroxisomal matrix proteins; required for peroxisomal matrix protein import; also proposed to have PTS1-receptor independent functions","termid":"PBO:0085283"}


id: GO:0051067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6,7-dihydropteridine, a bicyclic compound with the formula C6H6N4.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydropteridine metabolic process","synonyms":[{"name":"6,7-dihydropteridine metabolic process","type":"exact"},{"name":"dihydropteridine metabolism","type":"exact"},{"name":"dihydropteridine reduction","type":"narrow"}],"termid":"GO:0051067"}


id: GO:0019643
data:
  {"annotated_genes":["SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117056],"is_not":false,"summary":null,"term":"GO:0019643"}]},"cv_name":"biological_process","definition":"A pathway leading to the fixation of two molecules of CO2 and the production of one molecule of acetyl-CoA; essentially the oxidative TCA cycle running in reverse. Acetyl-CoA is reductively carboxylated to pyruvate, from which all other central metabolites can be formed. Most of the enzymes of reductive and oxidative TCA cycle are shared, with the exception of three key enzymes that allow the cycle to run in reverse: ATP citrate lyase, 2-oxoglutarate:ferredoxin oxidoreductase, and fumarate reductase. 2-oxoglutarate:ferredoxin oxidoreductase catalyzes the carboxylation of succinyl-CoA to 2-oxoglutarate, ATP citrate lyase the ATP-dependent cleavage of citrate to acetyl-CoA and oxaloacetate, and fumarate reductase the reduction of fumarate forming succinate.","definition_xrefs":["PMID:15838028","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reductive tricarboxylic acid cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019644"],"synonyms":[{"name":"reductive Kreb's cycle","type":"exact"},{"name":"reductive TCA cycle","type":"exact"},{"name":"reductive carboxylate cycle","type":"exact"},{"name":"reductive carboxylic acid cycle","type":"exact"},{"name":"reductive citric acid pathway","type":"exact"}],"termid":"GO:0019643","terms_by_termid":{"GO:0019643":null}}


id: PBO:0063018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 associated glutamate rich protein 1","termid":"PBO:0063018"}


id: GO:0019152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoin + NAD+ = diacetyl + NADH + H+. This reaction is catalyzed in the reverse direction.","definition_xrefs":["MetaCyc:ACETOINDEHYDROG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acetoin dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R02343"],"synonyms":[{"name":"diacetyl reductase activity","type":"exact"}],"termid":"GO:0019152"}


id: GO:0045522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-26 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-26 receptor binding","synonyms":[{"name":"IL-26","type":"narrow"},{"name":"interleukin-26 receptor ligand","type":"narrow"}],"termid":"GO:0045522"}


id: MONDO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelia of upper limb","termid":"MONDO:0017437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"amelia of upper limb, bilateral","secondary_identifiers":["Orphanet:295055","icd11.foundation:587439983"],"termid":"MONDO:0017479","xrefs":{"Monarch":{"xref_id":"0017479"}}}


id: MONDO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma composed of large cells with prominent nucleoli and a larger amount of cytoplasm in contrast with the cells of the classic medulloblastoma.","definition_xrefs":["NCIT:C6904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large cell medulloblastoma","secondary_identifiers":["DOID:3857","MEDGEN:226852","UMLS:C1266180","EFO:0008508","ICDO:9474/3"],"synonyms":[{"name":"large cell medulloblastoma","type":"exact"},{"name":"large cell medulloblastoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002791","xrefs":{"Monarch":{"xref_id":"0002791"}}}


id: PBO:0067661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 838, pseudogene","termid":"PBO:0067661"}


id: GO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 2,6-beta-D-fructofuranosidic linkages in 2,6-beta-D-fructans (levans) containing more than 3 fructose units.","definition_xrefs":["GOC:mlg","EC:3.2.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"levanase activity","secondary_identifiers":["MetaCyc:3.2.1.65-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan fructanohydrolase activity","type":"related"},{"name":"levan hydrolase activity","type":"exact"}],"termid":"GO:0031219"}


id: GO:2000225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of testosterone biosynthetic process.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of testosterone biosynthetic process","termid":"GO:2000224"},{"relation_name":"negatively_regulates","term_name":"testosterone biosynthetic process","termid":"GO:0061370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of testosterone biosynthetic process","termid":"GO:2000225"}


id: PBO:0113529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; member of serine carboxypeptidase family; N-glycosylated","termid":"PBO:0113529"}


id: PBO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menkes/Wilson disease","termid":"PBO:0003870"}


id: PBO:0046941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member C","termid":"PBO:0046941"}


id: MONDO:1010117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden unexpected death of a person age 1 to 18 years that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:31502215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden unexpected death in pediatrics","termid":"MONDO:1010120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexplained death in childhood","termid":"MONDO:1010117","xrefs":{"Monarch":{"xref_id":"1010117"}}}


id: PATO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tonicity which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"tonicity","termid":"PATO:0001439"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased tonicity","synonyms":[{"name":"high tonicity","type":"exact"}],"termid":"PATO:0001618"}


id: GO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a leukemia inhibitory factor to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"leukemia inhibitory factor signaling pathway","synonyms":[{"name":"leukemia inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0048861"}


id: PBO:0088346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX/EXS domain protein Spx2","termid":"PBO:0088346"}


id: GO:0090587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucosamine (out) = protein cysteine + glucosamine-6-phosphate (in).","definition_xrefs":["PMID:8246840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0022857","GO:0016740","GO:0003674","GO:0005215","GO:0003824"],"is_obsolete":false,"name":"protein-phosphocysteine-glucosamine phosphotransferase system transporter activity","termid":"GO:0090587"}


id: PBO:0113390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; located in the upstream region of PMA1; conserved among S. cerevisiae strains; mediates the cycloheximide-induced degradation of ubiquitinated Agp2p, a regulator of high affinity polyamine and carnitine transport; null mutant is polyamine resistant due to downregulation of PMA1","termid":"PBO:0113390"}


id: PBO:0049791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 26","termid":"PBO:0049791"}


id: MONDO:0009882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma clot retraction factor, deficiency of","secondary_identifiers":["MEDGEN:376656","UMLS:C1849778","OMIM:262800","MESH:C564885"],"synonyms":[{"name":"plasma clot retraction factor, deficiency of","type":"exact"}],"termid":"MONDO:0009882","xrefs":{"Monarch":{"xref_id":"0009882"}}}


id: PBO:0026727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_mitosis","termid":"PBO:0026727"}


id: GO:0032614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-11 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-11 production","secondary_identifiers":["GO:0072609","GO:0042230"],"synonyms":[{"name":"IL-11 production","type":"exact"},{"name":"interleukin-11 biosynthetic process","type":"narrow"},{"name":"interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032614"}


id: PBO:0069973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1268, pseudogene","termid":"PBO:0069973"}


id: PBO:0086998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reverse transcriptase subunit of the telomerase holoenzyme; essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function; mutations in human homolog are associated with aplastic anemia","termid":"PBO:0086998"}


id: PBO:0041708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 3","termid":"PBO:0041708"}


id: PBO:0035904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_glycoprotein_degradation_during_vegetative_growth","termid":"PBO:0035904"}


id: SO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that has been implicated in binding although the exact coordinates of binding may be unknown.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimentally_defined_binding_region","synonyms":[{"name":"experimentally defined binding region","type":"related"}],"termid":"SO:0001696"}


id: MONDO:0009348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical Hodgkin lymphoma (CHL) is a B-cell lymphoma characterized histologically by the presence of large mononuclear Hodgkin cells and multinucleated Reed-Sternberg (HRS) cells.","definition_xrefs":["Orphanet:391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkins lymphoma","termid":"MONDO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"classic Hodgkin lymphoma","secondary_identifiers":["NCIT:C7164","icd11.foundation:1616050398","MEDGEN:9283","OMIM:236000","ONCOTREE:CHL","UMLS:C0019829","GARD:16529"],"synonyms":[{"name":"Chl","type":"related"},{"name":"Hodgkin disease","type":"related"},{"name":"Hodgkin lymphoma, susceptibility to","type":"related"},{"name":"classic Hodgkin disease","type":"exact"},{"name":"classical Hodgkin lymphoma","type":"exact"},{"name":"classical Hodgkin's lymphoma","type":"exact"},{"name":"lymphoma, Hodgkin, classic","type":"related"}],"termid":"MONDO:0009348","xrefs":{"Monarch":{"xref_id":"0009348"}}}


id: GO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of inflorescences are generated and organized. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence morphogenesis","termid":"GO:0048281"}


