# terms

id: MONDO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndrome associating an acro-fronto-facio-nasal dysostosis with genitourinary anomalies.","definition_xrefs":["Orphanet:2211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acrofrontofacionasal dysostosis","termid":"MONDO:0008715"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofrontofacionasal dysostosis 2","secondary_identifiers":["MEDGEN:383797","GARD:287","UMLS:C1855904","OMIM:239710","MESH:C538332","SCTID:721835008"],"synonyms":[{"name":"AFFN dysostosis 2","type":"related"},{"name":"Naguib syndrome","type":"related"},{"name":"Naguib-Richieri-Costa syndrome","type":"exact"},{"name":"acrofrontofacionasal dysostosis 2","type":"exact"},{"name":"acrofrontofacionasal dysostosis type 2","type":"exact"},{"name":"acrofrontofacionasal dysostosis with genitourinary anomalies","type":"related"},{"name":"acrofrontofacionasal dysostosis, severe","type":"related"},{"name":"acrofrontofacionasal syndrome type 2","type":"exact"},{"name":"hypertelorism hypospadias polysyndactyly syndrome","type":"related"},{"name":"hypertelorism, hypospadias, and polysyndactyly syndrome","type":"related"},{"name":"hypertelorism-hypospadias-polysyndactyly syndrome","type":"exact"}],"termid":"MONDO:0009402","xrefs":{"Monarch":{"xref_id":"0009402"}}}


id: MONDO:0016201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of myotilin (obsolete MONDO:0016201)","secondary_identifiers":["Orphanet:209224"],"termid":"MONDO:0016201","xrefs":{"Monarch":{"xref_id":"0016201"}}}


id: MONDO:0005961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membranes of any sinus cavity.","definition_xrefs":["NCIT:C35024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sinusitis","secondary_identifiers":["ICD9:461.9","MEDGEN:20772","MESH:D012852","ICD9:461","SCTID:36971009","UMLS:C0037199","DOID:0050127","EFO:0007486"],"termid":"MONDO:0005961","xrefs":{"Monarch":{"xref_id":"0005961"}}}


id: PBO:0082081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribose-1-phosphate isomerase; catalyzes the isomerization of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate in the methionine salvage pathway","termid":"PBO:0082081"}


id: PBO:0069538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 808, pseudogene","termid":"PBO:0069538"}


id: PBO:0076146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate receptor 1","termid":"PBO:0076146"}


id: MONDO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete recurrent corneal erosion (obsolete MONDO:0001306)","secondary_identifiers":["ICD9:371.42","DOID:11541","HP:0000495","SCTID:2055003"],"synonyms":[{"name":"recurrent erosion of cornea","type":"exact"},{"name":"recurrent erosion syndrome","type":"exact"}],"termid":"MONDO:0001306","xrefs":{"Monarch":{"xref_id":"0001306"}}}


id: MONDO:0008504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SupraValvar Aortic Stenosis (SVAS) is characterized by the narrowing of the aorta lumen (close to its origin) or other arteries (branch pulmonary arteries, coronary arteries). This narrowing of the aorta or pulmonary branches may impede blood flow, resulting in heart murmur and ventricular hypertrophy (in case of aorta involvement). The narrowing results from a thickening of the artery wall, which is not related to atherosclerosis.","definition_xrefs":["Orphanet:3193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve stenosis","termid":"MONDO:0042981"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"supravalvular aortic stenosis","secondary_identifiers":["icd11.foundation:1066595728","MedDRA:10042598","HP:0004381","NANDO:2200285","MEDGEN:2001","NCIT:C85176","SCTID:268185002","OMIM:185500","UMLS:C0003499","DOID:1929","GARD:743"],"synonyms":[{"name":"SVAS","type":"exact"},{"name":"aortic supravalvular stenosis","type":"related"},{"name":"supra-valvular aortic stenosis","type":"exact"},{"name":"supravalvar aortic stenosis","type":"exact"},{"name":"supravalvar aortic stenosis, Eisenberg type","type":"related"},{"name":"supravalvular aortic stenosis","type":"exact"},{"name":"supravalvular aortic stenosis (disease)","type":"exact"}],"termid":"MONDO:0008504","xrefs":{"Monarch":{"xref_id":"0008504"}}}


id: PBO:0086833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to helicases; located in the telomere region on the right arm of chromosome VIII","termid":"PBO:0086833"}


id: GO:1901512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-microperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(-)-microperfuranone metabolic process","termid":"GO:1901510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone biosynthetic process","synonyms":[{"name":"(-)-microperfuranone anabolism","type":"exact"},{"name":"(-)-microperfuranone biosynthesis","type":"exact"},{"name":"(-)-microperfuranone formation","type":"exact"},{"name":"(-)-microperfuranone synthesis","type":"exact"}],"termid":"GO:1901512"}


id: PBO:0027428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_converged_replication_forks","termid":"PBO:0027428"}


id: FYPO:0004362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to an old growing cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to cell tip during vegetative growth","termid":"FYPO:0002852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to old growing cell tip","synonyms":[{"name":"increased protein localisation to old growing cell tip","type":"exact"},{"name":"increased protein localization to old growing cell end","type":"exact"},{"name":"increased protein localization to old growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to old growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0004362"}


id: FYPO:0007728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah","PMID:33137119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal protein kinase activity during cellular response to osmotic stress","termid":"FYPO:0007728"}


id: PR:O13622
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mss116 gene.","definition_xrefs":["UniProtKB:O13622","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mss116, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.04","synonyms":[{"name":"Spom972h-mss116","type":"exact"}],"termid":"PR:O13622"}


id: GO:1904535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000058","PMID:22579284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"positively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomeric loop disassembly","synonyms":[{"name":"activation of T loop disassembly","type":"narrow"},{"name":"activation of telomeric loop disassembly","type":"narrow"},{"name":"positive regulation of T loop disassembly","type":"exact"},{"name":"up regulation of T loop disassembly","type":"exact"},{"name":"up regulation of telomeric loop disassembly","type":"exact"},{"name":"up-regulation of T loop disassembly","type":"exact"},{"name":"up-regulation of telomeric loop disassembly","type":"exact"},{"name":"upregulation of T loop disassembly","type":"exact"},{"name":"upregulation of telomeric loop disassembly","type":"exact"}],"termid":"GO:1904535"}


id: GO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:lm","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle tissue development","termid":"GO:0014706"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue development","synonyms":[{"name":"heart muscle development","type":"exact"}],"termid":"GO:0048738"}


id: PATO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of whether the bearer exhibits the ability of a probe to react precisely with a specific target molecule.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specificity to","termid":"PATO:0002030"}


id: PBO:0075685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S1 RNA binding domain 1","termid":"PBO:0075685"}


id: FYPO:0006257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of prophase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of mitotic prophase","synonyms":[{"name":"normal duration of mitotic prophase during vegetative growth","type":"exact"},{"name":"normal duration of prophase during mitotic cell cycle","type":"exact"},{"name":"normal duration of prophase of mitosis","type":"exact"}],"termid":"FYPO:0006257"}


id: MONDO:0013018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis follicularis spinulosa decalvans","termid":"MONDO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"keratosis follicularis spinulosa decalvans, autosomal dominant","secondary_identifiers":["MESH:C567553","MEDGEN:412573","OMIM:612843","UMLS:C2748527","DOID:0080755","GARD:15586"],"synonyms":[{"name":"KFSD","type":"related"},{"name":"keratosis follicularis SPINULOSA decalvans, autosomal dominant","type":"related"},{"name":"keratosis follicularis spinulosa decalvans, autosomal dominant","type":"exact"}],"termid":"MONDO:0013018","xrefs":{"Monarch":{"xref_id":"0013018"}}}


id: PBO:0045161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 1","termid":"PBO:0045161"}


id: MONDO:0014292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy with mild cerebellar ataxia and white matter edema","secondary_identifiers":["SCTID:768663003","GARD:17565","NCIT:C171603","MEDGEN:1638681","OMIM:615651","Orphanet:363540","UMLS:C4554120"],"synonyms":[{"name":"LKPAT","type":"related"},{"name":"leukoencephalopathy with ataxia","type":"related"}],"termid":"MONDO:0014292","xrefs":{"Monarch":{"xref_id":"0014292"}}}


id: PBO:0117038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF4 antisense RNA 1","termid":"PBO:0117038"}


id: SO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_methylation_site","synonyms":[{"name":"H3K36 methylation site","type":"exact"}],"termid":"SO:0001733"}


id: MONDO:0015568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital nasal pyriform aperture stenosis","secondary_identifiers":["GARD:20039","Orphanet:162516"],"synonyms":[{"name":"isolated apertura pyriformis stenosis","type":"exact"},{"name":"isolated nasal pyriform aperture hypoplasia","type":"exact"}],"termid":"MONDO:0015568","xrefs":{"Monarch":{"xref_id":"0015568"}}}


id: GO:0034769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the basement membrane in the context of a normal process such as imaginal disc eversion.","definition_xrefs":["PMID:17301221","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane disassembly","secondary_identifiers":["GO:0060881"],"synonyms":[{"name":"basal lamina disassembly","type":"related"}],"termid":"GO:0034769"}


id: MONDO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of prothrombin deficiency that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital prothrombin deficiency","termid":"MONDO:0013361"},{"relation_name":"is_a","term_name":"prothrombin deficiency","termid":"MONDO:0024307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired prothrombin deficiency","secondary_identifiers":["MESH:C538174","Orphanet:26348","SCTID:4152002","MEDGEN:140275","UMLS:C0392610","GARD:475","NCIT:C131622"],"synonyms":[{"name":"acquired factor II deficiency","type":"related"},{"name":"acquired hypoprothrombinemia","type":"exact"},{"name":"acquired prothrombin deficiency","type":"exact"},{"name":"hypoprothrombinemia, acquired","type":"related"}],"termid":"MONDO:0016990","xrefs":{"Monarch":{"xref_id":"0016990"}}}


id: GO:0090505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells involved in wound healing.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epiboly","termid":"GO:0090504"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly involved in wound healing","termid":"GO:0090505"}


id: GO:1904557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-alanine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GO_REF:0000069","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine transport","termid":"GO:0015808"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-alanine transmembrane transport","termid":"GO:1904557"}


id: PBO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn4","termid":"PBO:0001274"}


id: MONDO:0014484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CDK6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 12, primary, autosomal recessive","secondary_identifiers":["MEDGEN:863593","OMIM:616080","UMLS:C4015156","DOID:0070284","GARD:16057"],"synonyms":[{"name":"CDK6 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH12","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CDK6","type":"exact"},{"name":"microcephaly 12, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014484","xrefs":{"Monarch":{"xref_id":"0014484"}}}


id: PBO:0052915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 15-1","termid":"PBO:0052915"}


id: MOD:00761
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with one hexose sugar group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"monohexosylated (Hex1)","synonyms":[{"name":"Hex1","type":"exact"}],"termid":"MOD:00761"}


id: PBO:0082306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic beta semi-aldehyde dehydrogenase; catalyzes the second step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082306"}


id: GO:0075208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host cAMP-mediated signal transduction (obsolete GO:0075208)","synonyms":[{"name":"modulation by symbiont of host cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075208"}


id: GO:1900402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of carbohydrate metabolic process.","definition_xrefs":["PMID:16408318","GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900402)","synonyms":[{"name":"regulation of carbohydrate metabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900402"}


id: PR:Q9UUE0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.12c gene.","definition_xrefs":["UniProtKB:Q9UUE0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0655 protein C17G9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.12c","synonyms":[{"name":"Spom972h-SPBC17G9.12c","type":"exact"}],"termid":"PR:Q9UUE0"}


id: GO:0045937
data:
  {"annotated_genes":["SJAG_02613","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[90032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"positively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of phosphate metabolic process","type":"narrow"},{"name":"positive regulation of phosphate metabolism","type":"exact"},{"name":"stimulation of phosphate metabolic process","type":"narrow"},{"name":"up regulation of phosphate metabolic process","type":"exact"},{"name":"up-regulation of phosphate metabolic process","type":"exact"},{"name":"upregulation of phosphate metabolic process","type":"exact"}],"termid":"GO:0045937","terms_by_termid":{"GO:1902648":null,"GO:1905857":null}}


id: PBO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored protein (predicted)","termid":"PBO:0000064"}


id: PBO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma","termid":"PBO:0050953"}


id: PBO:0073833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 9","termid":"PBO:0073833"}


id: FYPO:0005088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that contains two nuclei and one or more septa, and undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15829570","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, binucleate septated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, binucleate septated cell","type":"exact"}],"termid":"FYPO:0005088"}


id: PBO:0081411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 263","termid":"PBO:0081411"}


id: PBO:0051583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18","termid":"PBO:0051583"}


id: MONDO:1012896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hearing loss that occurs in pigs due to a mutation in the GJB2 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969"},{"relation_name":"is_a","term_name":"inherited auditory system disease, non-human animal","termid":"MONDO:1012970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, GJB2-related, pig","secondary_identifiers":["OMIA:002439-9823"],"termid":"MONDO:1012896","xrefs":{"Monarch":{"xref_id":"1012896"}}}


id: PBO:0017767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in histone acetylation","termid":"PBO:0017767"}


id: GO:0034959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the attainment of the full functional capacity of endothelin by conversion of Big-endothelin substrate into mature endothelin.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"endothelin maturation","termid":"GO:0034959"}


id: PBO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0000138"}


id: GO:0098798
data:
  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protein complex that is part of a mitochondrion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing 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id: PBO:0083854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain RNA binding domains; mutations in the human ortholog, EXOSC2, cause SHRF (Short stature, Hearing loss, Retinitis pigmentosa and distinctive Facies) syndrome, an RNA exosomopathy","termid":"PBO:0083854"}


id: MONDO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, solitary, and partially cystic neoplasm arising from the kidney. It occurs in children and adults. Presenting symptoms include hematuria and polycythemia. It is characterized by the presence of epithelial nodules embedded in a stroma containing spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"fibroepithelial neoplasm","termid":"MONDO:0021045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic adenofibroma","secondary_identifiers":["NCIT:C39812","DOID:2698","UMLS:C1266141","ICDO:8965/0","MEDGEN:220424"],"synonyms":[{"name":"metanephric adenofibroma","type":"exact"}],"termid":"MONDO:0002396","xrefs":{"Monarch":{"xref_id":"0002396"}}}


id: GO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intermediate chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"dynein intermediate chain binding","termid":"GO:0045505"}


id: PR:Q10178-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-1.","definition_xrefs":["UniProtKB:Q10178","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q10178-1"],"synonyms":[{"name":"Spom972h-SF3B1/iso:A","type":"exact"}],"termid":"PR:Q10178-1"}


id: FYPO:0001154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular methylamine level","synonyms":[{"name":"increased cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular methylamine level during vegetative growth","type":"exact"},{"name":"increased methylamine accumulation","type":"related"}],"termid":"FYPO:0001154"}


id: GO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-10 production","secondary_identifiers":["GO:0045074","GO:2001179"],"synonyms":[{"name":"regulation of IL-10 production","type":"exact"},{"name":"regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032653"}


id: PBO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013231"}


id: MONDO:0033954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mast cell activation syndrome where KIT-mutated and clonal mast cells are detected.","definition_xrefs":["PMID:23409940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mast cell activation syndrome","termid":"MONDO:0100004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"monoclonal mast cell activation syndrome","secondary_identifiers":["MEDGEN:1672509","NCIT:C181652","GARD:12980","UMLS:C4267893","Orphanet:529468"],"synonyms":[{"name":"primary MCAS","type":"exact"},{"name":"primary mast cell activation syndrome","type":"exact"}],"termid":"MONDO:0033954","xrefs":{"Monarch":{"xref_id":"0033954"}}}


id: MONDO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiosarcoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric angiosarcoma","secondary_identifiers":["MEDGEN:124687","DOID:4505","NCIT:C9174","UMLS:C0279988"],"synonyms":[{"name":"angiosarcoma","type":"broad"},{"name":"angiosarcoma (disease) of childhood","type":"exact"},{"name":"childhood angiosarcoma","type":"exact"},{"name":"childhood angiosarcoma (disease)","type":"exact"},{"name":"childhood hemangiosarcoma","type":"exact"},{"name":"paediatric angiosarcoma (disease)","type":"exact"},{"name":"paediatric hemangiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma (disease)","type":"exact"},{"name":"pediatric hemangiosarcoma","type":"exact"}],"termid":"MONDO:0003022","xrefs":{"Monarch":{"xref_id":"0003022"}}}


id: PBO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 9, pseudogene","termid":"PBO:0080130"}


id: MONDO:1010907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central core myopathy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central core myopathy, non-human animal","termid":"MONDO:1010192"},{"relation_name":"is_a","term_name":"myofibrillar myopathy, horse","termid":"MONDO:1010936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central core myopathy, horse","secondary_identifiers":["OMIA:000172-9796"],"termid":"MONDO:1010907","xrefs":{"Monarch":{"xref_id":"1010907"}}}


id: GO:0031815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y5 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"P2Y5 nucleotide receptor binding","synonyms":[{"name":"P2Y5 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031815"}


id: MONDO:0005987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the genus toxascaris.","definition_xrefs":["MESH:D017227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxascariasis","secondary_identifiers":["MEDGEN:21221","UMLS:C0040522","DOID:3107"],"synonyms":[{"name":"Toxascaris caused disease or disorder","type":"exact"},{"name":"Toxascaris disease or disorder","type":"exact"},{"name":"Toxascaris infectious disease","type":"exact"}],"termid":"MONDO:0005987","xrefs":{"Monarch":{"xref_id":"0005987"}}}


id: GO:0039699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An innate immune response evasion mechanism in which a symbiont methylates the 2'-O-ribose of the first or second transcribed nucleotide of its mRNAs. Methylation allows evasion of the host innate immune response, which degrades cap0 (non-methylated) mRNAs. This mechanism of immune evasion is used by viruses.","definition_xrefs":["PMID:35215972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of mRNA degradation by host via mRNA cap methylation","synonyms":[{"name":"IFIT mRNA restriction evasion by virus","type":"exact"},{"name":"evasion of mRNA degradation by host via mRNA cap methylation","type":"exact"},{"name":"viral mRNA cap methylation","type":"related"}],"termid":"GO:0039699"}


id: PBO:0038442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP2 associated kinase 1","termid":"PBO:0038442"}


id: MONDO:0014948
data:
  {"annotated_genes":["SJAG_02482"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87534],"is_not":false,"summary":null,"term":"MONDO:0014948"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02482":null},"genotype_count":0,"is_obsolete":false,"name":"short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617164","Orphanet:659702","UMLS:C4310686","MEDGEN:934653"],"synonyms":[{"name":"SRMMD","type":"exact"},{"name":"short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay","type":"exact"},{"name":"short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay; SRMMD","type":"exact"}],"termid":"MONDO:0014948","terms_by_termid":{"MONDO:0014948":null},"xrefs":{"Monarch":{"xref_id":"0014948"}}}


id: PBO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration related protein 2","termid":"PBO:0042586"}


id: MONDO:1011071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, American mink","secondary_identifiers":["OMIA:001033-452646"],"termid":"MONDO:1011071","xrefs":{"Monarch":{"xref_id":"1011071"}}}


id: GO:0016657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a nitrogenous group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor (obsolete GO:0016657)","synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor","type":"related"}],"termid":"GO:0016657"}


id: GO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to osteopontin.","definition_xrefs":["PMID:7532190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-osteopontin complex","synonyms":[{"name":"ITGAV-ITGB3-SPP1 complex","type":"narrow"}],"termid":"GO:0070029"}


id: PR:Q9USM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coenzyme Q-binding protein COQ10 homolog A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04486","PANTHER:PTHR12901:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q-binding protein coq10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.07","secondary_identifiers":["UniProtKB:Q9USM9"],"synonyms":[{"name":"Spom972h-COQ10A","type":"exact"}],"termid":"PR:Q9USM9"}


id: RO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interaction_relation_helper_property","termid":"RO:0002563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}


id: PBO:0091808
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans CAS5","termid":"PBO:0091808"}


id: GO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(+)-camphor metabolic process","synonyms":[{"name":"(+)-camphor metabolism","type":"exact"},{"name":"camphor metabolic process","type":"exact"},{"name":"camphor metabolism","type":"exact"}],"termid":"GO:0018882"}


id: PBO:0063698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 1, pseudogene 2","termid":"PBO:0063698"}


id: MONDO:0013080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"primary biliary cholangitis 3","secondary_identifiers":["MESH:C567816","DOID:0070360","OMIM:613008","GARD:15602","UMLS:C2751695","MEDGEN:414443"],"synonyms":[{"name":"PBC3","type":"related"},{"name":"biliary cirrhosis, primary, 3","type":"related"}],"termid":"MONDO:0013080","xrefs":{"Monarch":{"xref_id":"0013080"}}}


id: PBO:0050980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 27","termid":"PBO:0050980"}


id: MONDO:0008609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tristichiasis","secondary_identifiers":["OMIM:190800","MEDGEN:349889","UMLS:C1860785"],"synonyms":[{"name":"Tristichiasis","type":"exact"},{"name":"eyelashes, three rows of","type":"related"}],"termid":"MONDO:0008609","xrefs":{"Monarch":{"xref_id":"0008609"}}}


id: PBO:0063696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 1","termid":"PBO:0063696"}


id: PBO:0089148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA:L-glutamate N-acetyltransferase","termid":"PBO:0089148"}


id: GO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the cleavage furrow, a shallow groove in the cell surface near the old metaphase plate that marks the site of cytokinesis. This process includes the recruitment and localized activation of signals such as RhoA at the site of the future furrow to ensure that furrowing initiates at the correct site in the cell.","definition_xrefs":["GOC:ans","PMID:15811947","PMID:20687468","PMID:2192590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"cleavage furrow formation","synonyms":[{"name":"cleavage furrow positioning","type":"narrow"}],"termid":"GO:0036089"}


id: MONDO:0700026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 22 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 disorder","termid":"MONDO:0700026","xrefs":{"Monarch":{"xref_id":"0700026"}}}


id: FYPO:0000727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of cytoskeletal structures comprising actin filaments does not occur normally.","definition_xrefs":["GO:0007015","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin filament organization during vegetative growth","synonyms":[{"name":"abnormal actin filament organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of actin filament localization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000727"}


id: MONDO:0012559
data:
  {"annotated_genes":["SJAG_03089"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86061],"is_not":false,"summary":null,"term":"MONDO:0012559"}]},"cv_name":"mondo","definition":"Primary immunodeficiency syndrome due to p14 deficiency is characterized by short stature, hypopigmentation, coarse facies and frequent bronchopulmonary Streptococcus pneumoniae infections.","definition_xrefs":["Orphanet:90023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03089":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency syndrome due to p14 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:718717004","MEDGEN:372135","icd11.foundation:813140844","MESH:C563663","OMIM:610798","UMLS:C1835829","GARD:16783","NANDO:2200752"],"synonyms":[{"name":"immunodeficiency due to defect in MAPBP-interacting PROTEIN","type":"related"},{"name":"immunodeficiency due to defect in Mapbp-interacting Protein","type":"related"},{"name":"primary immunodeficiency syndrome due to LAMTOR2 deficiency","type":"exact"},{"name":"primary immunodeficiency syndrome with short stature","type":"exact"}],"termid":"MONDO:0012559","terms_by_termid":{"MONDO:0012559":null},"xrefs":{"Monarch":{"xref_id":"0012559"}}}


id: MONDO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the heart characterized by infiltration of the interstitial tissues by inflammatory cells, histiocytes, and the formation of granulomas. Giant cells are often present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinitis","termid":"MONDO:0004492"},{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"interstitial myocarditis","secondary_identifiers":["MEDGEN:44554","SCTID:37925008","UMLS:C0027060","DOID:817","NCIT:C35786"],"termid":"MONDO:0004485","xrefs":{"Monarch":{"xref_id":"0004485"}}}


id: PBO:0079288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 7","termid":"PBO:0079288"}


id: PBO:0062977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein nuclear 1","termid":"PBO:0062977"}


id: GO:1900070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["PMID:16278455","GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular hyperosmotic salinity response","termid":"GO:1900069"},{"relation_name":"is_a","term_name":"negative regulation of response to salt stress","termid":"GO:1901001"},{"relation_name":"negatively_regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"down regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"down-regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down-regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"downregulation of cellular hyperosmotic salinity response","type":"related"},{"name":"downregulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"inhibition of cellular hyperosmotic salinity response","type":"narrow"},{"name":"inhibition of cellular response to hyperosmotic salt stress","type":"narrow"},{"name":"negative regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900070"}


id: MONDO:0030362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type I interferonopathy characterized by severe developmental delay and progressive neurologic deterioration. Patients present in infancy with irritability and spasticity. Brain imaging shows diffusely abnormal white matter, cerebral atrophy, and intracranial calcification. Premature death has been associated with renal and/or hepatic failure.","definition_xrefs":["PMID:33230297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"RNU7-1-related type 1 interferonopathy","termid":"MONDO:0700263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 9","secondary_identifiers":["MEDGEN:1794176","UMLS:C5561966","OMIM:619487"],"synonyms":[{"name":"AGS9","type":"exact"},{"name":"Aicardi-Goutieres syndrome 9","type":"exact"}],"termid":"MONDO:0030362","xrefs":{"Monarch":{"xref_id":"0030362"}}}


id: MONDO:0008760
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87372],"is_not":false,"summary":null,"term":"MONDO:0008760"}]},"cv_name":"mondo","definition":"Beta-ketothiolase (T2) deficiency is a rare organic aciduria affecting ketone body metabolism and the catabolism of isoleucine and characterized by intermittent ketoacidotic episodes associated with vomiting, dyspnea, tachypnoea, hypotonia, lethargy and coma, with an onset during infancy or toddlerhood and usually ceasing by adolescence.","definition_xrefs":["Orphanet:134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of ketolysis","termid":"MONDO:0019229"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0002525","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"beta-ketothiolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:203750","MESH:C535434","UMLS:C1536500","NANDO:1200987","NCIT:C98841","DOID:14723","MEDGEN:280689","NANDO:2200493","GARD:872"],"synonyms":[{"name":"2-Methyl-3-hydroxybutyric acidemia","type":"related"},{"name":"2-methyl-3-hydroxybutyricacidemia","type":"exact"},{"name":"3-Ktd deficiency","type":"related"},{"name":"3-ketothiolase deficiency","type":"exact"},{"name":"3-oxothiolase deficiency","type":"exact"},{"name":"ALPHA-methylacetoacetic aciduria","type":"related"},{"name":"Alpha methylacetoacetic aciduria","type":"exact"},{"name":"Alpha-methyl-acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"BKT","type":"exact"},{"name":"Beta ketothiolase deficiency","type":"related"},{"name":"Mat deficiency","type":"related"},{"name":"T2 deficiency","type":"exact"},{"name":"alpha-methylacetoaceticaciduria","type":"exact"},{"name":"beta-ketothiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-Coa thiolase deficiency","type":"related"},{"name":"mitochondrial acetoacetyl-coenzyme A thiolase deficiency","type":"exact"},{"name":"peroxisomal thiolase deficiency","type":"exact"}],"termid":"MONDO:0008760","terms_by_termid":{"MONDO:0008760":null},"xrefs":{"Monarch":{"xref_id":"0008760"}}}


id: MONDO:0023230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ghose-Sachdev-Kumar syndrome","secondary_identifiers":["MESH:C537803","UMLS:C2974016","MEDGEN:425476"],"synonyms":[{"name":"bilateral nanophthalmos, pigmentary retinal dystrophy, and angle closure glaucoma","type":"related"}],"termid":"MONDO:0023230","xrefs":{"Monarch":{"xref_id":"0023230"}}}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: PBO:0053771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1016","termid":"PBO:0053771"}


id: FYPO:0003805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on non-fermentable carbon source","synonyms":[{"name":"decreased growth on non-fermentable carbon source","type":"broad"},{"name":"decreased vegetative cell growth on non-fermentable carbon source","type":"exact"},{"name":"reduced cell growth on non-fermentable carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0003805"}


id: GO:0018533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-cysteine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine acetylation","termid":"GO:0018533"}


id: PBO:0070935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 43","termid":"PBO:0070935"}


id: MONDO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma of the colon that has invaded into the submucosa.","definition_xrefs":["NCIT:C38760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"invasive carcinoma","termid":"MONDO:0040677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"submucosal invasive colon adenocarcinoma","secondary_identifiers":["UMLS:C1515024","DOID:3038","MEDGEN:271523"],"synonyms":[{"name":"submucosal invasive colon adenocarcinoma","type":"exact"}],"termid":"MONDO:0002496","xrefs":{"Monarch":{"xref_id":"0002496"}}}


id: GO:0035219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the prothoracic disc over time, from its initial formation through to its metamorphosis to form the adult humerous and anterior spiracle.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prothoracic disc development","termid":"GO:0035219"}


id: GO:0050290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide 1-phosphate + choline + H+.","definition_xrefs":["RHEA:20984","EC:3.1.4.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"sphingomyelin phosphodiesterase D activity","secondary_identifiers":["KEGG_REACTION:R02542","MetaCyc:SPHINGOMYELIN-PHOSPHODIESTERASE-D-RXN"],"synonyms":[{"name":"sphingomyelin ceramide-phosphohydrolase activity","type":"related"},{"name":"sphingomyelinase D","type":"related"}],"termid":"GO:0050290"}


id: SO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_escaping","synonyms":[{"name":"frameshift variant-NMD escaping","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002324"}


id: PR:O43032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle receptor subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03939","PANTHER:PTHR11564:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor subunit alpha homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.03","secondary_identifiers":["UniProtKB:O43032"],"synonyms":[{"name":"DP-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SR-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRPR","type":"exact"},{"name":"docking protein alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43032"}


id: PBO:0005057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf5","termid":"PBO:0005057"}


id: PBO:0043522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 4 homolog","termid":"PBO:0043522"}


id: PBO:0056527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 4 receptor","termid":"PBO:0056527"}


id: GO:0038070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038070)","synonyms":[{"name":"MAP kinase kinase kinase activity involved in cell wall biogenesis","type":"exact"},{"name":"MAP3K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038070"}


id: MONDO:0011919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autoimmune disease in which the cause of the disease is a mutation in the FOXD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 1","secondary_identifiers":["MEDGEN:335848","OMIM:607836","UMLS:C1842979"],"synonyms":[{"name":"AIS1","type":"related"},{"name":"FOXD3 autoimmune disease","type":"exact"},{"name":"autoimmune disease caused by mutation in FOXD3","type":"exact"},{"name":"autoimmune disease susceptibility locus, chromosome 1P-related","type":"related"},{"name":"autoimmune disease, susceptibility to, 1","type":"exact"},{"name":"autoimmune disease, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to autoimmune disease 1","type":"related"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility 2","type":"related"}],"termid":"MONDO:0011919","xrefs":{"Monarch":{"xref_id":"0011919"}}}


id: PBO:0053784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1035","termid":"PBO:0053784"}


id: GO:0008201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparin, a member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heparin binding","synonyms":[{"name":"heparan sulfate binding","type":"related"}],"termid":"GO:0008201"}


id: PBO:0056412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 9","termid":"PBO:0056412"}


id: PBO:0031176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe,_normal_size_cell","termid":"PBO:0031176"}


id: PBO:0036252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl phosphate reductase Pro1","termid":"PBO:0036252"}


id: GO:0035398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Positive regulation of a T cell mediated immune response mediated via cytokine production by a helper T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"helper T cell enhancement of adaptive immune response","termid":"GO:0035397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell enhancement of T cell mediated immune response","synonyms":[{"name":"helper T cell enhancement of T cell mediated immunity","type":"exact"},{"name":"provision of T cell help to T cell","type":"exact"}],"termid":"GO:0035398"}


id: PBO:0062448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 115 pseudogene","termid":"PBO:0062448"}


id: GO:0044565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a dendritic cell population by cell division. A dendritic cell is a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["PMID:18469816","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell proliferation","termid":"GO:0044565"}


id: PBO:0062789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 3","termid":"PBO:0062789"}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: MONDO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast lower-inner quadrant cancer","secondary_identifiers":["DOID:1649","ICD10CM:C50.3","ICD9:174.3","SCTID:188153009","UMLS:C0153551","MEDGEN:509325"],"synonyms":[{"name":"malignant neoplasm of lower-inner quadrant of female breast","type":"exact"}],"termid":"MONDO:0002068","xrefs":{"Monarch":{"xref_id":"0002068"}}}


id: GO:0010109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photosynthesis.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photosynthesis","termid":"GO:0010109"}


id: MONDO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by persistent or recurrent episodes of feeling detached from one's self (either one's body or one's mental processes), although the sufferer remains aware that this is only a feeling and does not represent reality.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depersonalization disorder","secondary_identifiers":["NCIT:C94331","UMLS:C0683416","SCTID:70764005","DOID:11038","ICD9:300.6","MEDGEN:151919"],"synonyms":[{"name":"neurotic derealization","type":"exact"}],"termid":"MONDO:0001186","xrefs":{"Monarch":{"xref_id":"0001186"}}}


id: PBO:0054622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2027","termid":"PBO:0054622"}


id: GO:0099123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dopamine from the somatodendritic compartment (cell body or dendrites) of a neuron.","definition_xrefs":["PMID:21576241","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine secretion","termid":"GO:0014046"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"somato-dendritic dopamine secretion","synonyms":[{"name":"STD DA release","type":"exact"},{"name":"STD dopamine release","type":"exact"},{"name":"somatodendritic dopamine release","type":"exact"}],"termid":"GO:0099123"}


id: GO:1900221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta clearance","synonyms":[{"name":"regulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900221"}


id: CHEBI:32588
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal chloride salt with a K(+) counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium chloride","termid":"CHEBI:32588"}


id: GO:0008250
data:
  {"annotated_genes":["SJAG_01069","SJAG_04090","SJAG_01389","SJAG_03333","SJAG_01006","SJAG_05348","SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63296,74650,75715,79106,79549,100352,102886],"is_not":false,"summary":null,"term":"GO:0008250"}]},"cv_name":"cellular_component","definition":"A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. The complex includes at least eight non-identical subunits. Different forms of the complex containing distinct subunits have been detected in mammals.","definition_xrefs":["PMID:15835887","PMID:32316603","PMID:31810196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01006":null,"SJAG_01069":null,"SJAG_01389":null,"SJAG_03333":null,"SJAG_04090":null,"SJAG_04127":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005789","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"oligosaccharyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"OST complex","type":"exact"},{"name":"OSTCI","type":"narrow"},{"name":"OSTCII","type":"narrow"},{"name":"OSTCIII","type":"narrow"},{"name":"oligosaccharyl transferase complex","type":"exact"}],"termid":"GO:0008250","terms_by_termid":{"GO:0008250":null}}


id: MONDO:0009690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the DOK7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 10","secondary_identifiers":["DOID:0110638","MESH:C563716","SCTID:230687001","GARD:15206","ICD9:358.00","MEDGEN:376880","UMLS:C1850792","DOID:0110668","OMIM:609456","OMIM:254300"],"synonyms":[{"name":"CMS Ib","type":"related"},{"name":"CMS10","type":"exact"},{"name":"CMS1B","type":"related"},{"name":"Cms Ib","type":"related"},{"name":"Cms Ib, formerly","type":"related"},{"name":"DOK7 congenital myasthenic syndrome","type":"exact"},{"name":"LGM","type":"exact"},{"name":"congenital muscular dystrophy merosin-positive","type":"exact"},{"name":"congenital myasthenic syndrome 10","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in DOK7","type":"exact"},{"name":"congenital myasthenic syndrome type 10","type":"exact"},{"name":"congenital myasthenic syndrome type IB","type":"related"},{"name":"congenital myasthenic syndrome type IB, formerly","type":"related"},{"name":"familial limb-girdle myasthenia","type":"exact"},{"name":"muscular dystrophy, congenital, merosin-POSITIVE","type":"related"},{"name":"myasthenia, limb-girdle, familial","type":"related"},{"name":"myasthenia, limb-girdle, familial, formerly","type":"related"},{"name":"myasthenic myopathy","type":"related"},{"name":"myasthenic myopathy, formerly","type":"related"},{"name":"myasthenic syndrome, congenital, 10","type":"related"},{"name":"myasthenic syndrome, congenital, type 10","type":"exact"}],"termid":"MONDO:0009690","xrefs":{"Monarch":{"xref_id":"0009690"}}}


id: MONDO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of peripheral nervous system","secondary_identifiers":["UMLS:C0751427","DOID:0080320","MEDGEN:199653"],"termid":"MONDO:0056804","xrefs":{"Monarch":{"xref_id":"0056804"}}}


id: GO:1990769
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of an axon or dendrite that is close to the neuronal cell body.","definition_xrefs":["PMID:21104189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"proximal neuron projection","termid":"GO:1990769"}


id: GO:0033144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of steroid hormone receptor signaling pathway","type":"broad"},{"name":"negative regulation of steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0033144"}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["GO:0031122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: MONDO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adult T-cell leukemia/lymphoma (obsolete MONDO:0000347)","termid":"MONDO:0000347","xrefs":{"Monarch":{"xref_id":"0000347"}}}


id: PBO:0012534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_morphogenesis_of","termid":"PBO:0012534"}


id: PBO:0063091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 9","termid":"PBO:0063091"}


id: GO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase. Interacts with a broad range of proteins by a redox mechanism, based on the reversible oxidation of 2 cysteine thiol groups to a disulfide, accompanied by the transfer of 2 electrons and 2 protons. The net result is the covalent interconversion of a disulfide and a dithiol.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin (obsolete GO:0000008)","synonyms":[{"name":"thioredoxin","type":"exact"}],"termid":"GO:0000008"}


id: PBO:0071029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 31","termid":"PBO:0071029"}


id: PBO:0081010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 45 pseudogene 1","termid":"PBO:0081010"}


id: PBO:0072357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 43","termid":"PBO:0072357"}


id: PBO:0073528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 1","termid":"PBO:0073528"}


id: MOD:00115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-palmitoyl-L-cysteine.","definition_xrefs":["Unimod:47#C","DeltaMass:303","PubMed:1872406","PubMed:3166978","PubMed:8824274","RESID:AA0106","PubMed:8180229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-palmitoylated residue","termid":"MOD:00653"},{"relation_name":"is_a","term_name":"palmitoylated-L-cysteine","termid":"MOD:01684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-palmitoyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(hexadecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(hexadecanoylthio)propanoic acid","type":"exact"},{"name":"ACT_SITE S-palmitoyl cysteine intermediate","type":"exact"},{"name":"LIPID S-palmitoyl cysteine","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"S-hexadecanoylated L-cysteine","type":"exact"},{"name":"S-palmitoyl-L-cysteine","type":"exact"},{"name":"S-palmitoylated L-cysteine","type":"exact"},{"name":"S-palmityl Cystenyl","type":"exact"},{"name":"SPamCys","type":"exact"},{"name":"cysteine hexadecanoate thioester","type":"exact"},{"name":"cysteine palmitate thioester","type":"exact"}],"termid":"MOD:00115"}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity (obsolete GO:0102689)","termid":"GO:0102689"}


id: PBO:0027591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_UV","termid":"PBO:0027591"}


id: PBO:0084242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Initiator methionine 2'-O-ribosyl phosphate transferase; modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA","termid":"PBO:0084242"}


id: GO:0050424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + peptidyl-L-alanine = L-alanine + peptide. The release of a C-terminal alanine from a peptide or a variety of pteroyl or acyl groups.","definition_xrefs":["EC:3.4.17.6","MetaCyc:ALANINE-CARBOXYPEPTIDASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete alanine carboxypeptidase activity (obsolete GO:0050424)","synonyms":[{"name":"N-benzoyl-L-alanine-amidohydrolase activity","type":"related"},{"name":"alanine carboxypeptidase activity","type":"exact"}],"termid":"GO:0050424"}


id: PBO:0035762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse_without_elongation","termid":"PBO:0035762"}


id: PBO:0074029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 17","termid":"PBO:0074029"}


id: PBO:0063459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA divergent transcript","termid":"PBO:0063459"}


id: PBO:0089493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ell binding protein Ebp1","termid":"PBO:0089493"}


id: MONDO:0021112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the scrotum.","definition_xrefs":["NCIT:C3560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotum neoplasm","termid":"MONDO:0003319"},{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"scrotum cancer","secondary_identifiers":["SCTID:363454002","MEDGEN:57564","ICD9:187.7","UMLS:C0153604"],"synonyms":[{"name":"cancer of scrotum","type":"exact"},{"name":"malignant neoplasm of scrotum","type":"exact"},{"name":"malignant neoplasm of the scrotum","type":"exact"},{"name":"malignant scrotal neoplasm","type":"exact"},{"name":"malignant scrotal tumor","type":"exact"},{"name":"malignant scrotal tumour","type":"exact"},{"name":"malignant scrotum neoplasm","type":"exact"},{"name":"malignant tumor of scrotum","type":"exact"},{"name":"malignant tumor of the scrotum","type":"exact"},{"name":"malignant tumour of scrotum","type":"exact"},{"name":"malignant tumour of the scrotum","type":"exact"},{"name":"scrotum cancer","type":"exact"}],"termid":"MONDO:0021112","xrefs":{"Monarch":{"xref_id":"0021112"}}}


id: PBO:0116736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2","termid":"PBO:0116736"}


id: GO:0001324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in non-dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress involved in chronological cell aging (obsolete GO:0001324)","synonyms":[{"name":"age-dependent response to oxidative stress during chronological cell ageing","type":"related"},{"name":"age-dependent response to oxidative stress during chronological cell aging","type":"related"}],"termid":"GO:0001324"}


id: PBO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleepy homolog Slp1","termid":"PBO:0000713"}


id: GO:1901539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene metabolic process","synonyms":[{"name":"ent-pimara-8(14),15-diene metabolism","type":"exact"}],"termid":"GO:1901539"}


id: PBO:0090555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Nat1","termid":"PBO:0090555"}


id: FYPO:0003984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of an amino acid measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered cellular amino acid level during vegetative growth","synonyms":[{"name":"abnormal cellular amino acid level during vegetative growth","type":"exact"},{"name":"altered cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"altered level of amino acid in cell","type":"exact"}],"termid":"FYPO:0003984"}


id: PBO:0046731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVX1 antisense RNA","termid":"PBO:0046731"}


id: PBO:0076920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor B1, mitochondrial","termid":"PBO:0076920"}


id: PBO:0050145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 1","termid":"PBO:0050145"}


id: PBO:0082289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginase, catabolizes arginine to ornithine and urea; expression responds to both induction by arginine and nitrogen catabolite repression; disruption decreases production of carcinogen ethyl carbamate during wine fermentation and also enhances freeze tolerance","termid":"PBO:0082289"}


id: GO:1904897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:15358192","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell proliferation","synonyms":[{"name":"regulation of Ito cell proliferation","type":"exact"},{"name":"regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904897"}


id: PBO:0078472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (GTG) 2-1","termid":"PBO:0078472"}


id: MOD:00715
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a methylated isoleucine residue, such as N-methyl-L-isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated isoleucine","synonyms":[{"name":"MeIle","type":"exact"}],"termid":"MOD:00715"}


id: PBO:0026788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_at_mat2P_silent_mating-type_cassette","termid":"PBO:0026788"}


id: MONDO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the apocrine sweat gland.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidradenitis","secondary_identifiers":["MESH:D016575","UMLS:C0085160","MEDGEN:43115","ICD9:705.83","DOID:2282","SCTID:69741000","NCIT:C32132"],"synonyms":[{"name":"Hydradenitis","type":"exact"},{"name":"apocrine sweat gland","type":"exact"},{"name":"apocrine sweat gland inflammation","type":"exact"},{"name":"inflammation of apocrine sweat gland","type":"exact"}],"termid":"MONDO:0002260","xrefs":{"Monarch":{"xref_id":"0002260"}}}


id: GO:0033599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland epithelial cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"}


id: PR:Q10209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.01 gene.","definition_xrefs":["UniProtKB:Q10209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4H3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.01","synonyms":[{"name":"Spom972h-SPAC4H3.01","type":"exact"}],"termid":"PR:Q10209"}


id: PBO:0031199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0031199"}


id: MONDO:0020570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brill-Zinsser disease (obsolete MONDO:0020570)","termid":"MONDO:0020570","xrefs":{"Monarch":{"xref_id":"0020570"}}}


id: PBO:0089589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase SWIRM2","termid":"PBO:0089589"}


id: PBO:0084462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; functionally redundant with Ssk2p; interacts with and is activated by Ssk1p; phosphorylates Pbs2p; SSK22 has a paralog, SSK2, that arose from the whole genome duplication","termid":"PBO:0084462"}


id: MOD:02027
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a URM1 protein.","definition_xrefs":["PubMed:21209336","PubMed:10713047"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"urmylated lysine","termid":"MOD:02027"}


id: GO:0030737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-iodophenol + S-adenosyl-L-methionine = 1-iodo-2-methoxybenzene + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.26","RHEA:14313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"iodophenol O-methyltransferase activity","secondary_identifiers":["MetaCyc:IODOPHENOL-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R03746"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-iodophenol O-methyltransferase activity","type":"related"}],"termid":"GO:0030737"}


id: GO:1902822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["PMID:23949442","GOC:TermGenie","GOC:pad","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of late endosome to lysosome transport","synonyms":[{"name":"regulation of prevacuolar compartment to lysosome transport","type":"broad"}],"termid":"GO:1902822"}


id: PBO:0030501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_checkpoint","termid":"PBO:0030501"}


id: PBO:0028138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_large_ribosomal_subunit_level","termid":"PBO:0028138"}


id: GO:0009167
data:
  {"annotated_genes":["SJAG_04634","SJAG_01298","SJAG_01814","SJAG_01859","SJAG_00964","SJAG_01081","SJAG_03355","SJAG_02850","SJAG_02364","SJAG_04681","SJAG_06634","SJAG_04849","SJAG_01070","SJAG_00044","SJAG_03140","SJAG_01661","SJAG_02038","SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77153,79183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[60148,64559,77125,58003,70288,72094,57100,65566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[76778,59483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[74297,57089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59502,63137,75082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[64496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[79184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[65071,75998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[75999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009167","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null}}


id: PR:000037031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho3 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:24947517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","termid":"PR:000037030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho3/GTP+","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rho3, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rho3/GTP+","type":"exact"},{"name":"rho3/GTP+","type":"exact"}],"termid":"PR:000037031"}


id: PBO:0083394
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id: MOD:00332
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glucosyl-arginine.","definition_xrefs":["PubMed:15279557","PubMed:9536051","PubMed:8521968","Unimod:41#R","RESID:AA0327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"omega-N-glycosyl-L-arginine","termid":"MOD:01980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"omega-N-glucosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc) arginine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:00332"}


id: PBO:0005350
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-factor pheromone Map2","termid":"PBO:0005350"}


id: GO:0035678
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id: GO:0045003
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id: PBO:0081136
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP30 zinc finger protein","termid":"PBO:0081136"}


id: PBO:0053287
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id: GO:0048765
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id: GO:0044786
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id: MOD:00902
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-arginine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-arginine residue","synonyms":[{"name":"ModArg","type":"exact"}],"termid":"MOD:00902"}


id: GO:1901283
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id: PBO:0034680
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id: GO:0071554
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wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070882"],"synonyms":[{"name":"cell wall organisation or biogenesis","type":"exact"},{"name":"cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"cellular cell wall organisation or biogenesis","type":"exact"},{"name":"cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:0071554","terms_by_termid":{"GO:0000032":null,"GO:0009272":null,"GO:0030476":null,"GO:0031505":null,"GO:0032995":null,"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0060237":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071852":null,"GO:0071966":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null,"GO:1903338":null,"GO:1903340":null,"GO:1904541":null}}


id: MONDO:1010993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, rabbit","secondary_identifiers":["OMIA:000487-9986"],"termid":"MONDO:1010993","xrefs":{"Monarch":{"xref_id":"1010993"}}}


id: PBO:0059579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTA1 divergent transcript","termid":"PBO:0059579"}


id: PBO:0116635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase activating protein 1","termid":"PBO:0116635"}


id: PBO:0003269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc31","termid":"PBO:0003269"}


id: GO:0102432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin + S-adenosyl-L-methionine = H+ + rhamnetin + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"quercetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13906"],"termid":"GO:0102432"}


id: PBO:0056791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF divergent transcript","termid":"PBO:0056791"}


id: PBO:0062804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 3","termid":"PBO:0062804"}


id: PBO:0027906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase","termid":"PBO:0027906"}


id: MONDO:0020060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gonosome structural anomaly (obsolete MONDO:0020060)","secondary_identifiers":["Orphanet:98157"],"synonyms":[{"name":"Sex-chromosome structural anomaly","type":"exact"}],"termid":"MONDO:0020060","xrefs":{"Monarch":{"xref_id":"0020060"}}}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: GO:1990813
data:
  {"annotated_genes":["SJAG_03926","SJAG_00229","SJAG_01805","SJAG_03989","SJAG_00600","SJAG_03681","SJAG_01601","SJAG_04259","SJAG_04126","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94137,99448,101595,102115,104815,108137,113535,114089,114801,116203],"is_not":false,"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome centromeric region is maintained during homologous chromosome segregation at meiotic anaphase I after cohesin is cleaved by separase along the arm regions.","definition_xrefs":["PMID:14730319","PMID:25533956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic centromeric cohesion protection in anaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anaphase cohesion protection","type":"exact"},{"name":"protection of centromeric cohesion during meiotic anaphase I","type":"exact"}],"termid":"GO:1990813","terms_by_termid":{"GO:1990813":null}}


id: FYECO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamine nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"glucose minimal medium, glutamine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamine nitrogen source","type":"related"}],"termid":"FYECO:0000403"}


id: MONDO:0003438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of small cell lung carcinoma in combination with a non-small cell carcinoma.","definition_xrefs":["NCIT:C9137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined lung carcinoma","termid":"MONDO:0006167"},{"relation_name":"is_a","term_name":"small cell lung carcinoma","termid":"MONDO:0008433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"combined small cell lung carcinoma","secondary_identifiers":["MEDGEN:234167","DOID:5421","ICDO:8045/3","ONCOTREE:CSCLC","UMLS:C1333125"],"synonyms":[{"name":"CSCLC","type":"related"},{"name":"combined small and large cell lung cancer","type":"exact"},{"name":"combined small and large cell lung carcinoma","type":"exact"},{"name":"combined small cell and large cell lung carcinoma","type":"exact"},{"name":"combined small cell carcinoma of lung","type":"exact"},{"name":"combined small cell carcinoma of the lung","type":"exact"},{"name":"combined small cell lung cancer","type":"exact"},{"name":"combined small cell lung carcinoma","type":"exact"},{"name":"combined type small cell carcinoma of lung","type":"exact"},{"name":"combined type small cell carcinoma of the lung","type":"exact"},{"name":"combined type small cell lung carcinoma","type":"exact"},{"name":"lung combined type small cell carcinoma","type":"related"},{"name":"mixed small cell and large cell carcinoma of lung","type":"exact"},{"name":"mixed small cell and large cell carcinoma of the lung","type":"exact"},{"name":"mixed small cell and large cell lung carcinoma","type":"exact"},{"name":"small cell and large cell carcinoma of lung","type":"exact"},{"name":"small cell and large cell carcinoma of the lung","type":"exact"},{"name":"small cell and large cell lung carcinoma","type":"exact"}],"termid":"MONDO:0003438","xrefs":{"Monarch":{"xref_id":"0003438"}}}


id: MONDO:0018887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Cutaneous lupus erythematosus (CLE) is an autoimmune disease that denotes a heterogeneous spectrum of clinical manifestations affecting the skin and can be divided into 4 categories: acute CLE (ACLE); subacute CLE (SCLE); chronic CLE (CCLE; the most diverse form); and intermittent CLE (ICLE). CLE can either occur alone or associated with systemic lupus erythematosus (SLE).","definition_xrefs":["Orphanet:535"],"gene_count":0,"genotype_count":0,"name":"obsolete rare cutaneous lupus erythematosus (obsolete MONDO:0018887)","secondary_identifiers":["MedDRA:10056509","MESH:D008178"],"synonyms":[{"name":"rare cutaneous lupus erythematosus","type":"exact"}],"termid":"MONDO:0018887","xrefs":{"Monarch":{"xref_id":"0018887"}}}


id: PBO:0050427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H3 pseudogene 1","termid":"PBO:0050427"}


id: MONDO:0700090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the LGI1 gene, encoding leucine-rich glioma-inactivated protein 1. It is characterized by partial seizures originating in the temporal lobe and often accompanied by auditory sensory manifestations.","definition_xrefs":["NCIT:C141441"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant epilepsy with auditory features","termid":"MONDO:0010898"},{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial temporal lobe, 1","secondary_identifiers":["OMIM:600512","MEDGEN:1643229","DOID:0060748","UMLS:C4551957"],"synonyms":[{"name":"ADLTE","type":"exact"},{"name":"ADPEAF","type":"exact"},{"name":"ETL1","type":"exact"},{"name":"epilepsy, familial temporal lobe, type 1","type":"exact"},{"name":"epilepsy, lateral temporal lobe, autosomal dominant","type":"exact"},{"name":"epilepsy, partial, with auditory features","type":"exact"}],"termid":"MONDO:0700090","xrefs":{"Monarch":{"xref_id":"0700090"}}}


id: GO:0071752
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric form of secretory IgA immunoglobulin complex.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimeric IgA immunoglobulin complex","termid":"GO:0071750"},{"relation_name":"is_a","term_name":"secretory IgA immunoglobulin complex","termid":"GO:0071751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"secretory dimeric IgA immunoglobulin complex","synonyms":[{"name":"secretory dimeric IgA antibody","type":"exact"},{"name":"secretory dimeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071752"}


id: PBO:0071148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 12","termid":"PBO:0071148"}


id: PBO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body WD repeat protein, human WDR8 family","termid":"PBO:0016555"}


id: GO:0061407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0061407)","termid":"GO:0061407"}


id: MONDO:0008728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of congenital adrenal hyperplasia (CAH), characterized by simple virilizing or salt wasting forms that can manifest with genital ambiguity in females and with adrenal insufficiency (in both sexes), and that presents with dehydration, hypoglycemia in the neonatal period (that can be lethal if untreated), and hyperandrogenia.","definition_xrefs":["Orphanet:90794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency","secondary_identifiers":["UMLS:C2936858","SCTID:717261006","NANDO:1200399","MESH:C535979","GARD:12665","MEDGEN:424833","NCIT:C131087","OMIM:201910","SCTID:124221007","NANDO:2200374"],"synonyms":[{"name":"21 hydroxylase deficiency","type":"related"},{"name":"21-OHD","type":"exact"},{"name":"21-hydroxylase deficiency","type":"related"},{"name":"CYP21 deficiency","type":"related"},{"name":"adrenal hyperplasia 3","type":"related"},{"name":"adrenal hyperplasia, congenital, due to 21-HYDROXYLASE deficiency","type":"related"},{"name":"adrenal hyperplasia, congenital, due to 21-hydroxylase deficiency","type":"related"},{"name":"classic 21-OHD CAH","type":"exact"},{"name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency","type":"exact"},{"name":"congenital adrenal hyperplasia 1","type":"related"},{"name":"congenital adrenal hyperplasia due to 21-hydroxylase deficiency","type":"related"},{"name":"hyperandrogenism, Nonclassic type, due to 21-Hydroxylase deficiency","type":"related"}],"termid":"MONDO:0008728","xrefs":{"Monarch":{"xref_id":"0008728"}}}


id: PR:P05767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl39 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.04","synonyms":[{"name":"Spom972h-rpl39","type":"exact"},{"name":"YL36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05767"}


id: PBO:0053245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 1","termid":"PBO:0053245"}


id: PBO:0033784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex-dependent_protein_catabolic_process","termid":"PBO:0033784"}


id: GO:0050160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + orsellinate depside = 2 o-orsellinate + H+.","definition_xrefs":["RHEA:19549","EC:3.1.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"orsellinate-depside hydrolase activity","secondary_identifiers":["MetaCyc:ORSELLINATE-DEPSIDE-HYDROLASE-RXN","KEGG_REACTION:R00054"],"synonyms":[{"name":"lecanorate hydrolase activity","type":"related"}],"termid":"GO:0050160"}


id: PR:Q9UT72
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rfp2 gene.","definition_xrefs":["UniProtKB:Q9UT72","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase complex slx8-rfp subunit rfp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.18","synonyms":[{"name":"RING finger protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rfp2","type":"exact"}],"termid":"PR:Q9UT72"}


id: MOD:00952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the loss of a water molecule.","definition_xrefs":["PubMed:10801322","RESID:AA0441#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asp)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asp-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:00952"}


id: PBO:0072944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 23","termid":"PBO:0072944"}


id: PBO:0084143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter of the major facilitator superfamily; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0084143"}


id: GO:0021611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the facial nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","ISBN:0838580343","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"facial nerve morphogenesis","termid":"GO:0021610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve formation","synonyms":[{"name":"CN VII biosynthesis","type":"related"},{"name":"CN VII formation","type":"related"}],"termid":"GO:0021611"}


id: MONDO:1010477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in chimpanzee.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, chimpanzee","secondary_identifiers":["OMIA:000878-9598"],"termid":"MONDO:1010477","xrefs":{"Monarch":{"xref_id":"1010477"}}}


id: PBO:0091757
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2053516_2053517insC","termid":"PBO:0091757"}


id: PBO:0078839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-3","termid":"PBO:0078839"}


id: MONDO:1010650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelger-Huet anomaly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelger-Huet anomaly, non-human animal","termid":"MONDO:1010077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pelger-Huet anomaly, dog","secondary_identifiers":["OMIA:000783-9615"],"termid":"MONDO:1010650","xrefs":{"Monarch":{"xref_id":"1010650"}}}


id: PBO:0088643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein Bcd1","termid":"PBO:0088643"}


id: GO:0051981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a copper chelate from one side of a membrane to the other. A copper chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:26512647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"copper chelate transmembrane transporter activity","termid":"GO:0051981"}


id: FYPO:0004518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated) and is curved along the long axis, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, branched, elongated cell","termid":"FYPO:0002170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, branched, curved, elongated cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated, curved and branched cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"}],"termid":"FYPO:0004518"}


id: PBO:0083930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fungal-specific protein of unknown function; induced in respiratory-deficient cells; YAR068W has a paralog, YHR214W-A, that arose from a segmental duplication","termid":"PBO:0083930"}


id: MONDO:0020255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculomotor palsy (obsolete MONDO:0020255)","termid":"MONDO:0020255","xrefs":{"Monarch":{"xref_id":"0020255"}}}


id: GO:0102399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose = S-adenosyl-L-homocysteine + dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N-methyltransferase activity (obsolete GO:0102399)","termid":"GO:0102399"}


id: MONDO:0021350
data:
  {"annotated_genes":["SJAG_02460","SJAG_01410","SJAG_03453","SJAG_04394","SJAG_00757","SJAG_00079","SJAG_03720","SJAG_03689","SJAG_00229","SJAG_04502","SJAG_04114","SJAG_02426","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87675,86550,87672,87674,86551,86553,87671,86554,86552,87673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[87158,87159,87690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the thoracic segment of trunk.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00229":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"is_obsolete":false,"name":"neoplasm of thorax","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:C30-C39","MEDGEN:11793","UMLS:C0039981","ICD9:239.89","NCIT:C3406","SCTID:255058005"],"synonyms":[{"name":"neoplasm of the thorax","type":"exact"},{"name":"neoplasm of thoracic segment of trunk","type":"exact"},{"name":"thoracic neoplasm","type":"exact"},{"name":"thoracic segment of trunk neoplasm","type":"exact"},{"name":"thoracic segment of trunk neoplasm (disease)","type":"exact"},{"name":"thoracic segment of trunk tumor","type":"exact"},{"name":"thoracic segment of trunk tumour","type":"exact"},{"name":"thoracic tumor","type":"exact"},{"name":"thoracic tumour","type":"exact"},{"name":"tumor of the thorax","type":"exact"},{"name":"tumor of thoracic segment of trunk","type":"exact"},{"name":"tumor of thorax","type":"exact"},{"name":"tumour of the thorax","type":"exact"},{"name":"tumour of thoracic segment of trunk","type":"exact"},{"name":"tumour of thorax","type":"exact"}],"termid":"MONDO:0021350","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null,"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0021350"}}}


id: PBO:0018160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP14 family protein Alp14","termid":"PBO:0018160"}


id: MONDO:1012900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any xanthinuria that occurs in dogs due to a mutation in the XDH gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"xanthinuria, dog","termid":"MONDO:1011623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, XDH-related, dog","secondary_identifiers":["OMIA:002445-9615"],"synonyms":[{"name":"xanthinuria, type I, dog","type":"exact"}],"termid":"MONDO:1012900","xrefs":{"Monarch":{"xref_id":"1012900"}}}


id: PBO:0116813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD3, EIF1B and MYRIP antisense RNA 1","termid":"PBO:0116813"}


id: PBO:0043556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 5 chain","termid":"PBO:0043556"}


id: GO:1901080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of smooth muscle","synonyms":[{"name":"regulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901080"}


id: MONDO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperpigmentation, familial progressive (obsolete MONDO:0000131)","termid":"MONDO:0000131","xrefs":{"Monarch":{"xref_id":"0000131"}}}


id: GO:0033875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside bisphosphate metabolic process","synonyms":[{"name":"ribonucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0033875"}


id: GO:0048205
data:
  {"annotated_genes":["SJAG_04391","SJAG_03268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71644,118043],"is_not":false,"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:jid","PMID:10219233","ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"},{"relation_name":"part_of","term_name":"COPI-coated vesicle budding","termid":"GO:0035964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPI coating of Golgi-derived vesicle","type":"exact"},{"name":"COPI vesicle coating","type":"related"}],"termid":"GO:0048205","terms_by_termid":{"GO:0048205":null}}


id: PBO:0002773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c (proteolipid subunit)","termid":"PBO:0002773"}


id: PBO:0066980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 283","termid":"PBO:0066980"}


id: PBO:0054875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2289","termid":"PBO:0054875"}


id: MONDO:0032631
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86607],"is_not":false,"summary":null,"term":"MONDO:0032631"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618248","MEDGEN:1648481","UMLS:C4748826","GARD:18375","DOID:0112090"],"synonyms":[{"name":"MC1DN27","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 27","type":"related"}],"termid":"MONDO:0032631","terms_by_termid":{"MONDO:0032631":null},"xrefs":{"Monarch":{"xref_id":"0032631"}}}


id: PBO:0057914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3617","termid":"PBO:0057914"}


id: GO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process observed in bacteria and filamentous fungi and leading to spontaneous death by lysis. Examples are lysis of the mother cell during sporulation of Bacillus subtilis and self-degradation of fungal cells in Aspergillus nidulans. Autolysis is also involved in bacterial biofilm formation.","definition_xrefs":["GOC:mtg_apoptosis","PMID:26811896","GOC:jh2","GOC:add","PMID:10974124","PMID:19286987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autolysis","secondary_identifiers":["Wikipedia:Autolysis"],"termid":"GO:0001896"}


id: PBO:0068585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 36, pseudogene","termid":"PBO:0068585"}


id: GO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the fusion of a phagosome, a vesicle formed by phagocytosis, with a lysosome.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome organization","termid":"GO:0007040"},{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"phagolysosome assembly","synonyms":[{"name":"late phagosome biosynthesis","type":"related"},{"name":"late phagosome formation","type":"related"},{"name":"phagolysosome formation","type":"related"}],"termid":"GO:0001845"}


id: PATO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter which is relatively large.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased length","termid":"PATO:0000573"},{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased diameter","termid":"PATO:0001714"}


id: PBO:0089196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar DNAJ domain protein, DNAJC9 family, implicated in mRNA splicing","termid":"PBO:0089196"}


id: MOD:00618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:299#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan carboxylation","synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:00618"}


id: GO:1900716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"regulation of violaceol II biosynthetic process","synonyms":[{"name":"regulation of violaceol II anabolism","type":"exact"},{"name":"regulation of violaceol II biosynthesis","type":"exact"},{"name":"regulation of violaceol II formation","type":"exact"},{"name":"regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900716"}


id: PBO:0041696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 2","termid":"PBO:0041696"}


id: PBO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.1","termid":"PBO:0000222"}


id: GO:0014885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an injury stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of wounding","termid":"GO:0014822"},{"relation_name":"is_a","term_name":"response to injury involved in regulation of muscle adaptation","termid":"GO:0014876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of injury involved in regulation of muscle adaptation","synonyms":[{"name":"detection of injury involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014885"}


id: PBO:0064446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC5 centriolar protein","termid":"PBO:0064446"}


id: PBO:0068318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19A, RBR E3 ubiquitin protein ligase","termid":"PBO:0068318"}


id: PBO:0045516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTD1 antisense RNA 1","termid":"PBO:0045516"}


id: GO:0007419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral cord over time, from its formation to the mature structure. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms.","definition_xrefs":["PMID:30826502","GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral cord development","termid":"GO:0007419"}


id: SO:1000036
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous nucleotide sequence is inverted in the same position.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion","secondary_identifiers":["loinc:LA6689-9"],"synonyms":[{"name":"inversion","type":"exact"}],"termid":"SO:1000036"}


id: PBO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPCML intronic transcript 2","termid":"PBO:0061889"}


id: PBO:0031589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_apoptosis","termid":"PBO:0031589"}


id: PBO:0072388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 14","termid":"PBO:0072388"}


id: PBO:0012009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal complex subunit (predicted)","termid":"PBO:0012009"}


id: PBO:0064519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2M pseudogene 1","termid":"PBO:0064519"}


id: PBO:0074310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 2","termid":"PBO:0074310"}


id: PBO:0040436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 1","termid":"PBO:0040436"}


id: PBO:0052803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 43, pseudogene","termid":"PBO:0052803"}


id: PBO:0089923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2011 family conserved fungal protein","termid":"PBO:0089923"}


id: GO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"polymyxin transport","termid":"GO:0042893"}


id: MONDO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the normal flow of the intestinal contents within the bowel.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal obstruction","secondary_identifiers":["ICD9:560.9","NCIT:C9175","UMLS:C0021843","SCTID:81060008","MESH:D007415","DOID:8437","ICD9:560.89","MEDGEN:43933"],"synonyms":[{"name":"bowel obstruction","type":"exact"}],"termid":"MONDO:0004565","xrefs":{"Monarch":{"xref_id":"0004565"}}}


id: MONDO:0009388
data:
  {"annotated_genes":["SJAG_02388","SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85801,85802],"is_not":false,"summary":null,"term":"MONDO:0009388"}]},"cv_name":"mondo","definition":"Hyperlysinaemia is a lysine metabolism disorder characterized by elevated levels of lysine in the cerebrospinal fluid and blood. Variable degrees of saccharopinuria are also present.","definition_xrefs":["Orphanet:2203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01061":null,"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperlysinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:82816","UMLS:C0268553","GARD:2828","ICD9:270.7","OMIM:238700","HP:0002161","SCTID:58558003","DOID:9274","NCIT:C123433"],"synonyms":[{"name":"Alpha-aminoadipic semialdehyde synthase deficiency","type":"related"},{"name":"L-lysine NAD-oxido-reductase deficiency","type":"related"},{"name":"L-lysine:NAD-oxido-reductase deficiency","type":"related"},{"name":"hyperlysinemia","type":"exact"},{"name":"hyperlysinemia (disease)","type":"exact"},{"name":"hyperlysinemia type I","type":"exact"},{"name":"hyperlysinemia, type 1","type":"related"},{"name":"hyperlysinemia, type I","type":"related"},{"name":"lysine alpha-ketoglutarate reductase deficiency","type":"exact"},{"name":"lysine intolerance","type":"related"},{"name":"lysine:Alpha-ketoglutarate reductase deficiency","type":"related"}],"termid":"MONDO:0009388","terms_by_termid":{"MONDO:0009388":null},"xrefs":{"Monarch":{"xref_id":"0009388"}}}


id: PBO:0067815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 117","termid":"PBO:0067815"}


id: PATO:0001635
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity (continuant)","termid":"PATO:0001634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (continuant)","termid":"PATO:0001635"}


id: GO:0009303
data:
  {"annotated_genes":["SJAG_02815","SJAG_00692","SJAG_04106","SJAG_02871","SJAG_01444","SJAG_01948","SJAG_01698","SJAG_02653","SJAG_02747","SJAG_02101","SJAG_03144","SJAG_03578","SJAG_00731","SJAG_02070","SJAG_01128","SJAG_04261","SJAG_01313","SJAG_00139","SJAG_03956","SJAG_04766","SJAG_01562","SJAG_01765","SJAG_00202","SJAG_02813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[59996,79732,79527,80219,76064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042790"},{"annotations":[115829,113823,95546,103659,114521,92374,70386,74926,75531,103002,110991,113822,90719,77882,114107,105207,106120,113443],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"rRNA metabolic process","termid":"GO:0016072"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00202":null,"SJAG_00692":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null,"SJAG_04766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"rRNA transcription","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rRNA biosynthesis","type":"broad"},{"name":"rRNA biosynthetic process","type":"broad"},{"name":"rRNA synthesis","type":"broad"}],"termid":"GO:0009303","terms_by_termid":{"GO:0006362":null,"GO:0042790":null,"GO:0042791":null}}


id: FYPO:0001055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis normally, in that the spindle forms normally and chromosomes condense normally, but then undergoes septation despite abnormal chromosome segregation, giving rise to a cut phenotype.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000337","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"cut following normal mitotic chromosome condensation","synonyms":[{"name":"cut following normal chromosome condensation during mitotic cell cycle","type":"exact"},{"name":"cut following normal entry into mitosis","type":"related"},{"name":"cut following normal mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"cut following normal mitotic entry","type":"related"},{"name":"cut with normal mitotic chromosome condensation","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation, with normal chromosome condensation","type":"exact"}],"termid":"FYPO:0001055"}


id: SO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inverted repeat (SO:0000294) occurring at the 3-prime termini of a DNA transposon.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat","termid":"SO:0000481"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_terminal_inverted_repeat","synonyms":[{"name":"3' TIR","type":"exact"},{"name":"three prime terminal inverted repeat","type":"exact"}],"termid":"SO:0000421"}


id: SO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a mitochondria.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_chromosome","synonyms":[{"name":"mitochondrial chromosome","type":"exact"}],"termid":"SO:0000819"}


id: GO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-12","termid":"GO:0070671"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-12","synonyms":[{"name":"cellular response to IL-12","type":"exact"}],"termid":"GO:0071349"}


id: PBO:0004147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human mitofilin ortholog (predicted)","termid":"PBO:0004147"}


id: PBO:0059909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 32","termid":"PBO:0059909"}


id: PBO:0111905
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr5 N-terminal domain","termid":"PBO:0111905"}


id: PR:O13789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized beta-glucan synthesis-associated protein C17G6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.11c","synonyms":[{"name":"Spom972h-SPAC17G6.11c","type":"exact"}],"termid":"PR:O13789"}


id: MONDO:0005619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infectious disorder contracted by consumption of food or drink contaminated with Salmonella typhi. This disorder is common in developing countries and can be treated with antibiotics.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salmonellosis","termid":"MONDO:0000827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"typhoid fever","secondary_identifiers":["MONDO:0020486","EFO:0006789","UMLS:C0041466","SCTID:4834000","icd11.foundation:1528414070","ICD9:002.0","DOID:13258","Orphanet:99745","GARD:9564","MESH:D014435","NCIT:C35089","MEDGEN:11973"],"synonyms":[{"name":"typhoid","type":"exact"},{"name":"typhoid fever","type":"exact"},{"name":"typhoidal salmonellosis","type":"exact"}],"termid":"MONDO:0005619","xrefs":{"Monarch":{"xref_id":"0005619"}}}


id: GO:0052365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont xylan (obsolete GO:0052365)","termid":"GO:0052365"}


id: PBO:0080238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 1","termid":"PBO:0080238"}


id: PBO:0077963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 16-1","termid":"PBO:0077963"}


id: FYPO:0005731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased arginase activity","synonyms":[{"name":"reduced arginase activity","type":"exact"}],"termid":"FYPO:0005731"}


id: MONDO:0800469
data:
  {"annotated_genes":["SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"}]},"cv_name":"mondo","definition":"A complex set of inherited conditions caused by a pathogenic variant(s) in the ACD gene that results in aberrant telomere biology.","definition_xrefs":["PMID:20301779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"ACD-related telomere biology disorder","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"ACD-related telomeropathy","type":"exact"}],"termid":"MONDO:0800469","terms_by_termid":{"MONDO:0014690":null},"xrefs":{"Monarch":{"xref_id":"0800469"}}}


id: PBO:0084415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major ADP/ATP carrier of the mitochondrial inner membrane; exchanges cytosolic ADP for mitochondrially synthesized ATP; also imports heme and ATP; required for viability in many lab strains that carry a sal1 mutation; PET9 has a paralog, AAC3, that arose from the whole genome duplication; human homolog SLC25A4 implicated in progressive external ophthalmoplegia can complement yeast null mutant","termid":"PBO:0084415"}


id: PBO:0052957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kyphoscoliosis peptidase","termid":"PBO:0052957"}


id: MONDO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bacterial toxic-shock syndrome (obsolete MONDO:0018179)","termid":"MONDO:0018179","xrefs":{"Monarch":{"xref_id":"0018179"}}}


id: MONDO:0032658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly, acquired, with impaired intellectual development","secondary_identifiers":["UMLS:C4748993","OMIM:618286","MEDGEN:1648471"],"synonyms":[{"name":"MACID","type":"related"},{"name":"MACROCEPHALY, ACQUIRED, WITH IMPAIRED INTELLECTUAL DEVELOPMENT","type":"related"},{"name":"Macrocephaly, Acquired, With Mental Retardation","type":"related"}],"termid":"MONDO:0032658","xrefs":{"Monarch":{"xref_id":"0032658"}}}


id: MONDO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant mixed epithelial and mesenchymal neoplasm that arises from the cervix and is characterized by the presence of malignant mesenchymal elements and benign epithelial elements.","definition_xrefs":["NCIT:C40229"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical carcinosarcoma","termid":"MONDO:0002877"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"malignant mixed epithelial and mesenchymal tumor of cervix uteri","termid":"MONDO:0016277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenosarcoma","secondary_identifiers":["MEDGEN:308948","Orphanet:213792","SCTID:764847000","GARD:20492","ICD10CM:C53.0","UMLS:C1516426","DOID:4111"],"synonyms":[{"name":"adenosarcoma of the cervix uteri","type":"exact"},{"name":"adenosarcoma of uterine cervix","type":"exact"},{"name":"cervical Muellerian adenosarcoma","type":"exact"},{"name":"cervical Mullerian adenosarcoma","type":"exact"},{"name":"cervical Müllerian adenosarcoma","type":"exact"},{"name":"cervical adenosarcoma","type":"exact"},{"name":"uterine cervix adenosarcoma","type":"exact"}],"termid":"MONDO:0002876","xrefs":{"Monarch":{"xref_id":"0002876"}}}


id: PR:000050538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Ser-527 of the amino acid sequence represented by UniProtKB:Q9P7J8. Example: UniProtKB:Q9P7J8, Ser-527, MOD:00046.","definition_xrefs":["PMID:12805221","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","termid":"PR:000036914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gad8/Phos(S527)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase gad8 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gad8/Phos:2","type":"exact"},{"name":"UniProtKB:Q9P7J8, Ser-527, MOD:00046","type":"narrow"},{"name":"gad8/Phos(S527)","type":"exact"}],"termid":"PR:000050538"}


id: GO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + UDP-alpha-D-glucose = p-aminobenzoate-beta-D-glucopyranosyl ester + UDP.","definition_xrefs":["MetaCyc:RXN-6142","PMID:18385129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose:4-aminobenzoate acylglucosyltransferase activity","synonyms":[{"name":"UDP-glucose:p-aminobenzoate acylglucosyltransferase activity","type":"related"},{"name":"UDP-glucose:p-aminobenzoate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pABA acylglucosyltransferase activity","type":"related"}],"termid":"GO:0080002"}


id: MONDO:0011157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome, which may be classified among the neurocutaneous syndromes, associates abnormalities of the cerebellum (rhombencephalosynapsis), cranial nerves (trigeminal anesthesia), and scalp (alopecia). It has been reported in 11 individuals so far. Other features observed in patients were craniosynostosis, midfacial hypoplasia, bilateral corneal opacities, low-set ears, short stature, moderate intellectual impairment and ataxia. Hyperactivity, depression, self-injurious behavior and bipolar disorder have also been reported.","definition_xrefs":["Orphanet:1532"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Gomez-Lopez-Hernandez syndrome","secondary_identifiers":["UMLS:C0795959","GARD:229","MEDGEN:163201","OMIM:601853","SCTID:722451006","MESH:C537285"],"synonyms":[{"name":"Cerebellotrigeminal dermal dysplasia","type":"related"},{"name":"Cerebellotrigeminal dermal dysplasia cerebello-trigeminal-dermal dysplasia","type":"related"},{"name":"Cerebellotrigeminal-dermal dysplasia","type":"related"},{"name":"Cerebellotrigeminal-dermal dysplasia syndrome","type":"exact"},{"name":"GLHS","type":"related"},{"name":"GOMEZ-LOPEZ-HERNANDEZ syndrome","type":"related"},{"name":"Gomez Lopez Hernandez syndrome","type":"related"},{"name":"Gomez-Lopez-Hernandez syndrome","type":"exact"},{"name":"Gomez-Lopez-Hernández syndrome","type":"related"},{"name":"Gómez-López-Hernández syndrome","type":"related"},{"name":"craniosynostosis-alopecia-brain defect syndrome","type":"exact"}],"termid":"MONDO:0011157","xrefs":{"Monarch":{"xref_id":"0011157"}}}


id: MONDO:1010783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia/skin fragility syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia/skin fragility syndrome, non-human animal","termid":"MONDO:1010141"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, dog","termid":"MONDO:1011500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia/skin fragility syndrome, dog","secondary_identifiers":["OMIA:001864-9615"],"termid":"MONDO:1010783","xrefs":{"Monarch":{"xref_id":"1010783"}}}


id: PBO:0066684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 2","termid":"PBO:0066684"}


id: PATO:0001734
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a plant by virtue of the bearer's disposition to being between evergeen and deciduous.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-deciduous(plant)","termid":"PATO:0001734"}


id: PBO:0081335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 134","termid":"PBO:0081335"}


id: PBO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OIP5 antisense RNA 1","termid":"PBO:0061844"}


id: GO:0018208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline modification","termid":"GO:0018208"}


id: GO:0099054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynapse.","definition_xrefs":["GOC:dos","GOC:bf","GOC:PARL","PMID:24449494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"},{"relation_name":"part_of","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"presynapse assembly","synonyms":[{"name":"presynapse biogenesis","type":"exact"},{"name":"presynaptic terminal assembly","type":"exact"}],"termid":"GO:0099054"}


id: GO:0033646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of the living contents of a host cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host intracellular region","termid":"GO:0043656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host intracellular part","synonyms":[{"name":"host cell intracellular part","type":"exact"}],"termid":"GO:0033646"}


id: PBO:0110102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1, possible chaperone for mitochondrial zinc containing proteins","termid":"PBO:0110102"}


id: GO:0031917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases synaptic metaplasticity. Metaplasticity is a higher-order form of plasticity and is manifest as a change in the ability to induce subsequent synaptic plasticity that is the ability of synapses to change as circumstances require.","definition_xrefs":["PMID:8658594","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic plasticity","termid":"GO:0031914"},{"relation_name":"is_a","term_name":"regulation of synaptic metaplasticity","termid":"GO:0031916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic metaplasticity","synonyms":[{"name":"down regulation of synaptic metaplasticity","type":"exact"},{"name":"down-regulation of synaptic metaplasticity","type":"exact"},{"name":"downregulation of synaptic metaplasticity","type":"exact"},{"name":"inhibition of synaptic metaplasticity","type":"narrow"}],"termid":"GO:0031917"}


id: GO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIb hypersensitivity","synonyms":[{"name":"activation of type IIb hypersensitivity","type":"narrow"},{"name":"stimulation of type IIb hypersensitivity","type":"narrow"},{"name":"up regulation of type IIb hypersensitivity","type":"exact"},{"name":"up-regulation of type IIb hypersensitivity","type":"exact"},{"name":"upregulation of type IIb hypersensitivity","type":"exact"}],"termid":"GO:0001801"}


id: GO:0045111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intermediate filament cytoskeleton","termid":"GO:0045111"}


id: MONDO:0858956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system benign neoplasm that is characterized by the presence of clear glial neoplastic cells reminiscent of oligodendroglioma.","definition_xrefs":["DOID:0081302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse leptomeningeal glioneuronal tumor","secondary_identifiers":["UMLS:C4329735","MEDGEN:1391318","NCIT:C129424"],"termid":"MONDO:0858956","xrefs":{"Monarch":{"xref_id":"0858956"}}}


id: MONDO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency with hyper-IgM (obsolete MONDO:0000047)","termid":"MONDO:0000047","xrefs":{"Monarch":{"xref_id":"0000047"}}}


id: PATO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch of an increased apical height.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"arched","termid":"PATO:0001594"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-arched","termid":"PATO:0002162"}


id: PBO:0049135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein pathway suppressor 2 pseudogene 1","termid":"PBO:0049135"}


id: FYPO:0007028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring at the medial cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to medial cortex septin ring during vegetative growth","synonyms":[{"name":"normal protein localisation to medial cortex septin ring during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortex septin ring during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007028"}


id: GO:0045061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of T cell selection that occurs in the thymus.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymic T cell selection","synonyms":[{"name":"thymic T lymphocyte selection","type":"exact"},{"name":"thymic T-cell selection","type":"exact"},{"name":"thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045061"}


id: MONDO:0015522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete situs ambiguus (obsolete MONDO:0015522)","termid":"MONDO:0015522","xrefs":{"Monarch":{"xref_id":"0015522"}}}


id: GO:1900865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any RNA modification that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast RNA modification","synonyms":[{"name":"RNA editing in chloroplast","type":"narrow"}],"termid":"GO:1900865"}


id: SO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29576969","PMID:29086764","PMID:29182528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_mRNA","synonyms":[{"name":"circular mRNA","type":"exact"},{"name":"coding circRNA","type":"exact"}],"termid":"SO:0002292"}


id: FYPO:0002827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"decreased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"decreased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0002827"}


id: PBO:0027214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0027214"}


id: PATO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality","secondary_identifiers":["PATO:0002079","Wikipedia:Physical_property"],"synonyms":[{"name":"relational physical quality","type":"exact"}],"termid":"PATO:0001018"}


id: MONDO:1010457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, Rhesus monkey","secondary_identifiers":["OMIA:000515-9544"],"termid":"MONDO:1010457","xrefs":{"Monarch":{"xref_id":"1010457"}}}


id: GO:0030170
data:
  {"annotated_genes":["SJAG_03671","SJAG_03861","SJAG_03312","SJAG_01766","SJAG_00937","SJAG_04178","SJAG_00097","SJAG_03055","SJAG_02205","SJAG_03961","SJAG_00830","SJAG_00714","SJAG_03914","SJAG_04988","SJAG_04678","SJAG_03306","SJAG_00495","SJAG_05230","SJAG_01019","SJAG_02791","SJAG_04145","SJAG_00186","SJAG_04149","SJAG_00432","SJAG_03434","SJAG_02305","SJAG_00582","SJAG_02972","SJAG_00673","SJAG_03102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57217,57875,58321,60239,61682,63652,64981,65401,65591,65650,65816,66420,66438,66729,67750,68048,68233,68906,69202,70253,70801,72500,72762,73740,74552,74749,78649,79675,80048,110752],"is_not":false,"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyridoxal phosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030170","terms_by_termid":{"GO:0030170":null}}


id: SO:0001569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_site_variant","synonyms":[{"name":"cryptic splice site activation","type":"exact"}],"termid":"SO:0001569"}


id: GO:0015130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mevalonate from one side of a membrane to the other. Mevalonate is the anion of mevalonic acid; its (R)-enantiomer is a strategic intermediate derived from hydroxymethylglutaryl-CoA in the biosynthesis of polyprenyl compounds.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"mevalonate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015130"}


id: MONDO:0016447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"White fibrous papulosis of the neck (WFPN) is a rare, acquired, dermal elastic tissue disorder characterized by multiple, 2-3 mm sized, non-confluent, asymptomatic, white or pale-colored, non-follicular, firm papular lesions occurring predominantly on the lateral or posterior aspects of the neck. Other, rarely reported sites include inferior axillae, central mid-back and upper sternal region.","definition_xrefs":["Orphanet:228290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white fibrous papulosis of the neck","secondary_identifiers":["icd11.foundation:1989852752","MEDGEN:1647664","UMLS:C4706484","GARD:20587"],"termid":"MONDO:0016447","xrefs":{"Monarch":{"xref_id":"0016447"}}}


id: GO:0019640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucuronate into D-xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators","PMID:27189775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate catabolic process","termid":"GO:0042840"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"D-glucuronate catabolic process to D-xylulose 5-phosphate","secondary_identifiers":["Reactome:R-HSA-5661270"],"synonyms":[{"name":"glucuronate breakdown to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate catabolic process to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019640"}


id: GO:0099017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which localization of a protein is maintained at the cell tip.","definition_xrefs":["GOC:dos","GOC:vw","PMID:12894167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein localization at cell tip","synonyms":[{"name":"maintenance of protein location at cell tip","type":"exact"}],"termid":"GO:0099017"}


id: MONDO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clear cell adenocarcinoma of the uterine ligament composed mainly of clear or hobnob cells. The clear cells are large, bizarre, and multinucleated.","definition_xrefs":["NCIT:C40139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament adenocarcinoma","termid":"MONDO:0002741"},{"relation_name":"is_a","term_name":"cervical clear cell adenocarcinoma","termid":"MONDO:0006135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament clear cell adenocarcinoma","secondary_identifiers":["DOID:5302"],"synonyms":[{"name":"uterine ligament clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003384","xrefs":{"Monarch":{"xref_id":"0003384"}}}


id: MONDO:0021562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the umbilical cord stump in newborns.","definition_xrefs":["NCIT:C116008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalitis","secondary_identifiers":["SCTID:239095007","GTR:AN0533760","UMLS:C0028992","MEDGEN:508000"],"synonyms":[{"name":"Omphalitis","type":"related"},{"name":"omphalitis","type":"exact"}],"termid":"MONDO:0021562","xrefs":{"Monarch":{"xref_id":"0021562"}}}


id: GO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a sequence of DNA that is a termination site for bacterial-type RNA polymerase in order to promote transcription termination by bacterial-type RNA polymerase.","definition_xrefs":["PMID:18280161","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, bacterial-type RNA polymerase termination site sequence-specific binding (obsolete GO:0001149)","synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity","type":"exact"}],"termid":"GO:0001149"}


id: PBO:0062297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 8","termid":"PBO:0062297"}


id: MOD:00005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O3-glycosylthreonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosyl-L-threonine","synonyms":[{"name":"OGlycoThr","type":"exact"}],"termid":"MOD:00005"}


id: SO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 5' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_5UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR5","type":"exact"},{"name":"incomplete transcript 5UTR variant","type":"exact"}],"termid":"SO:0002077"}


id: PBO:0061070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKD inhibitor of WNT signaling pathway 1","termid":"PBO:0061070"}


id: PBO:0113179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein and plus-end directed microtubule (MT) polymerase; involved in mitotic spindle positioning, nuclear migration, microtubule polymerization and inhibition of MT catastrophe; stabilizes microtubules by targeting Bik1p to the MT plus end; Kip2p levels are controlled during the cell cycle","termid":"PBO:0113179"}


id: PBO:0059155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase 1","termid":"PBO:0059155"}


id: GO:0044632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, lectin pathway in another organism (obsolete GO:0044632)","synonyms":[{"name":"negative regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044632"}


id: SO:1000070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant affects the way in which the primary transcriptional product is processed to form the mature transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000070 sequence_variant_affecting_transcript_processing (obsolete SO:1000070)","synonyms":[{"name":"mutation affecting transcript processing","type":"related"},{"name":"sequence variant affecting transcript processing","type":"exact"}],"termid":"SO:1000070"}


id: PBO:0085071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonhistone component of centromeric chromatin; binds to histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0085071"}


id: PR:Q9UUK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tma23 gene.","definition_xrefs":["UniProtKB:Q9UUK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1952.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.02","synonyms":[{"name":"Spom972h-tma23","type":"exact"}],"termid":"PR:Q9UUK4"}


id: PBO:0059216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro","termid":"PBO:0059216"}


id: MONDO:0044913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that has spread to the eye from another anatomic site.","definition_xrefs":["NCIT:C4586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the eye","secondary_identifiers":["SCTID:94292003","UMLS:C0347019","MEDGEN:91115"],"synonyms":[{"name":"Metastases to eye","type":"exact"},{"name":"Metastases to the eye","type":"exact"},{"name":"Metastatic malignant neoplasm in the eye","type":"exact"},{"name":"Metastatic malignant neoplasm to the eye","type":"exact"},{"name":"Metastatic neoplasm to the eye","type":"exact"},{"name":"Metastatic tumor to the eye","type":"exact"},{"name":"Metastatic tumour to the eye","type":"exact"},{"name":"eye metastasis","type":"exact"},{"name":"metastasis to eye","type":"exact"},{"name":"metastasis to the eye","type":"exact"}],"termid":"MONDO:0044913","xrefs":{"Monarch":{"xref_id":"0044913"}}}


id: MONDO:0000173
data:
  {"annotated_genes":["SJAG_03188","SJAG_04316","SJAG_04053","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87019,87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:609308"],"termid":"MONDO:0000173","terms_by_termid":{"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0000173"}}}


id: GO:1902898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid methyl ester.","definition_xrefs":["GO_REF:0000068","PMID:16570218","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid methyl ester metabolic process","synonyms":[{"name":"FAME metabolic process","type":"exact"},{"name":"fatty acid methyl ester metabolism","type":"exact"}],"termid":"GO:1902898"}


id: GO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an immature B cell.","definition_xrefs":["GOC:jal","PMID:16551251","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature B cell differentiation","synonyms":[{"name":"immature B cell development","type":"related"},{"name":"immature B lymphocyte differentiation","type":"exact"},{"name":"immature B-cell differentiation","type":"exact"},{"name":"immature B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002327"}


id: MONDO:0011504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"NDE1-related microhydranencephaly is a rare, hereditary syndrome with a central nervous system malformation as major feature characterized by extreme microcephaly and growth restriction, severe motor delay and mental retardation, and typical radiological findings of gross dilation of the ventricles resulting from the absence (or severe delay in the development) of cerebral hemispheres, hypoplasia of the corpus callosum, cerebellum, and brainstem. Associated features are thin bones and scalp rugae.","definition_xrefs":["Orphanet:443162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic fetal brain disruption sequence","termid":"MONDO:0015660"},{"relation_name":"is_a","term_name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"NDE1-related microhydranencephaly","secondary_identifiers":["UMLS:C1857977","GARD:10216","MESH:C537555","OMIM:605013","MEDGEN:341899"],"synonyms":[{"name":"MHAC","type":"exact"},{"name":"hydranencephaly and microcephaly","type":"related"},{"name":"microhydranencephaly","type":"related"}],"termid":"MONDO:0011504","xrefs":{"Monarch":{"xref_id":"0011504"}}}


id: PBO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17 (predicted)","termid":"PBO:0002855"}


id: SO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partially_duplicated_transcript where the 3' end of the transcript is duplicated.","direct_ancestors":[{"relation_name":"is_a","term_name":"partially_duplicated_transcript","termid":"SO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_duplicated_transcript","synonyms":[{"name":"3' duplicated transcript","type":"exact"},{"name":"three prime duplicated transcript","type":"exact"},{"name":"three prime partially duplicated transcript","type":"exact"}],"termid":"SO:0002246"}


id: PBO:0043851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3d receptor 2","termid":"PBO:0043851"}


id: GO:0038161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the peptide hormone prolactin to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn","PMID:21664429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"prolactin signaling pathway","synonyms":[{"name":"PRL signaling pathway","type":"exact"},{"name":"prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:0038161"}


id: GO:0021644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the vagus nerve is generated and organized. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"vagus nerve development","termid":"GO:0021564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve morphogenesis","synonyms":[{"name":"CN X morphogenesis","type":"related"}],"termid":"GO:0021644"}


id: PBO:0117142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain 1 NAT10 acetyltransferase adaptor","termid":"PBO:0117142"}


id: PBO:0068201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 508","termid":"PBO:0068201"}


id: PBO:0046872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule C","termid":"PBO:0046872"}


id: GO:1904064
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cation transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15304482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"positively_regulates","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cation transmembrane transport","type":"narrow"},{"name":"up regulation of cation transmembrane transport","type":"exact"},{"name":"up-regulation of cation transmembrane transport","type":"exact"},{"name":"upregulation of cation transmembrane transport","type":"exact"}],"termid":"GO:1904064","terms_by_termid":{"GO:1905665":null}}


id: GO:0018883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid used in manufacture of synthetic fibers of the polyamide type. It can cause local irritation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"caprolactam metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cap"],"synonyms":[{"name":"caprolactam metabolism","type":"exact"}],"termid":"GO:0018883"}


id: PBO:0072160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 37","termid":"PBO:0072160"}


id: GO:1905593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optical nerve axon regeneration.","definition_xrefs":["PMID:16699509","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of optical nerve axon regeneration","termid":"GO:1905591"},{"relation_name":"positively_regulates","term_name":"optical nerve axon regeneration","termid":"GO:0101027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optical nerve axon regeneration","synonyms":[{"name":"activation of optical nerve axon regeneration","type":"narrow"},{"name":"up regulation of optical nerve axon regeneration","type":"exact"},{"name":"up-regulation of optical nerve axon regeneration","type":"exact"},{"name":"upregulation of optical nerve axon regeneration","type":"exact"}],"termid":"GO:1905593"}


id: PBO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine N-acetyltransferase (predicted)","termid":"PBO:0000988"}


id: PBO:0053643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 691","termid":"PBO:0053643"}


id: PBO:0049568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 5","termid":"PBO:0049568"}


id: FYPO:0001480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity","synonyms":[{"name":"normal neutral trehalase activity","type":"exact"},{"name":"normal trehalase activity","type":"broad"}],"termid":"FYPO:0001480"}


id: PBO:0004733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia","termid":"PBO:0004733"}


id: GO:0009354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of succinyl-CoA to dihydrolipoamide to form S-succinyldihydrolipoamide. The enzyme is a component of the multienzyme 2-oxoglutarate dehydrogenase complex.","definition_xrefs":["EC:2.3.1.61"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoamide S-succinyltransferase complex (obsolete GO:0009354)","synonyms":[{"name":"dihydrolipoamide S-succinyltransferase complex","type":"exact"}],"termid":"GO:0009354"}


id: PBO:0046096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A3 pseudogene 1","termid":"PBO:0046096"}


id: PBO:0075673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit A","termid":"PBO:0075673"}


id: GO:0006400
data:
  {"annotated_genes":["SJAG_01877","SJAG_03236","SJAG_01041","SJAG_01261","SJAG_00865","SJAG_03677","SJAG_04700","SJAG_04182","SJAG_01172","SJAG_03932","SJAG_04065","SJAG_02099","SJAG_02179","SJAG_02637","SJAG_02084","SJAG_02386","SJAG_01418","SJAG_00886","SJAG_04367","SJAG_01302","SJAG_03896","SJAG_01314","SJAG_01269","SJAG_04848","SJAG_04181","SJAG_01781","SJAG_05023","SJAG_00235","SJAG_04736","SJAG_04113","SJAG_00499","SJAG_00352","SJAG_05334","SJAG_00579","SJAG_04756","SJAG_00892","SJAG_00255","SJAG_00186","SJAG_04233","SJAG_02978","SJAG_06284","SJAG_01575","SJAG_04189","SJAG_00358","SJAG_06560","SJAG_04380","SJAG_00319","SJAG_02863","SJAG_01024","SJAG_02352","SJAG_02302","SJAG_00088","SJAG_04704","SJAG_02042","SJAG_04680","SJAG_05228","SJAG_04993","SJAG_05249","SJAG_04265","SJAG_04175","SJAG_04735","SJAG_04453","SJAG_01638","SJAG_04649","SJAG_00683","SJAG_03616","SJAG_00325","SJAG_03240","SJAG_04452","SJAG_03367","SJAG_00174","SJAG_01375","SJAG_03572","SJAG_04201","SJAG_00378","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61175,71255],"is_not":false,"summary":null,"term":"GO:0006400"},{"annotations":[71539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019988"},{"annotations":[80698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061504"},{"annotations":[78463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[75879,118918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[117258,94602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[93138,76569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[103415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[67894,58954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[72704,107637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051391"},{"annotations":[107087,110467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[90796,106107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[60750,74854,65222,66151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002943"},{"annotations":[95036,98401,72625,63187,75630,96555,72713,74403,76567,73009,76266,74052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[78462,71499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[104454,73671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[115126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[102810,106551,73318,76048,91547,78822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031119"},{"annotations":[99784,58893,98608,79129,101459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002949"},{"annotations":[101433,59302,74061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"},{"annotations":[119078,72810,110464,114278,100898,80105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[88604,94266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[72701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002101"},{"annotations":[96127,98914,98913,90019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002099"},{"annotations":[74470,74576,117497,107200,77893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"},{"annotations":[105879,88134,96390,118946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002098"},{"annotations":[98177,103207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"},{"annotations":[75079,74053,95037,72626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"},{"relation_name":"is_a","term_name":"RNA 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modification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0016549","Reactome:R-HSA-6782315"],"synonyms":[{"name":"tRNA editing","type":"narrow"}],"termid":"GO:0006400","terms_by_termid":{"GO:0002098":null,"GO:0002099":null,"GO:0002100":null,"GO:0002101":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002143":null,"GO:0002926":null,"GO:0002939":null,"GO:0002940":null,"GO:0002943":null,"GO:0002946":null,"GO:0002949":null,"GO:0006400":null,"GO:0019988":null,"GO:0030488":null,"GO:0031119":null,"GO:0031591":null,"GO:0051391":null,"GO:0061504":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0106004":null,"GO:0106217":null,"GO:1990799":null,"GO:1990983":null}}


id: SO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the nuclear genome of cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_sequence","synonyms":[{"name":"nuclear sequence","type":"exact"}],"termid":"SO:0000738"}


id: PBO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologs cannot be distinguished","termid":"PBO:0000110"}


id: GO:0006133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methylenetetrahydrofolate oxidation (obsolete GO:0006133)","synonyms":[{"name":"5,10-methylenetetrahydrofolate oxidation","type":"exact"}],"termid":"GO:0006133"}


id: GO:0150141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk","PMID:26936882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD86 production","termid":"GO:0150140"},{"relation_name":"negatively_regulates","term_name":"CD86 biosynthetic process","termid":"GO:0035781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD86 production","synonyms":[{"name":"negative regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150141"}


id: MONDO:0009049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of Cushing syndrome (CS) characterized by nodular enlargement of both adrenal glands (multiple nodules above 1 cm in diameter) that produce excess cortisol and features of adrenocorticotropic hormone (ACTH) independent CS.","definition_xrefs":["Orphanet:189427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cushing syndrome due to macronodular adrenal hyperplasia","secondary_identifiers":["DOID:0111622","EFO:0009041","MESH:C565662","UMLS:C2062388","NANDO:2200353","GARD:10824","MEDGEN:923388","SCTID:720459002"],"synonyms":[{"name":"ACTH-independent Cushing syndrome","type":"broad"},{"name":"ACTH-independent macronodular adrenocortical hyperplasia","type":"related"},{"name":"AIMAH","type":"related"},{"name":"MMAD","type":"related"},{"name":"adrenocorticotropic hormone-independent macronodular adrenal hyperplasia","type":"related"},{"name":"corticotropin-independent macronodular adrenal hyperplasia","type":"related"},{"name":"massive macronodular adrenocortical disease","type":"related"},{"name":"primary bilateral macronodular adrenal hyperplasia","type":"exact"},{"name":"primary macronodular adrenal hyperplasia","type":"related"}],"termid":"MONDO:0009049","xrefs":{"Monarch":{"xref_id":"0009049"}}}


id: MONDO:0011365
data:
  {"annotated_genes":["SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86888],"is_not":false,"summary":null,"term":"MONDO:0011365"}]},"cv_name":"mondo","definition":"Blepharophimosis-intellectual disability syndrome, SBBYS type is characterized by the association of congenital hypothyroidism, facial dysmorphism (microcephaly, blepharophimosis, a bulbous nose, thin lip, low-set ears and micrognathia), postaxial polydactyly and severe intellectual deficit. Less than 20 cases have been reported so far. Cryptorchidism is present in affected males. Some patients also have cardiac anomalies (interventricular communication), hypotonia and growth delay. Autosomal recessive inheritance has been suggested.","definition_xrefs":["Orphanet:3047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ohdo syndrome and variants","termid":"MONDO:0000734"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02165":null},"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis - intellectual disability syndrome, SBBYS type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536717","ICD9:759.89","SCTID:699298009","MEDGEN:350209","OMIM:603736","DOID:0060290","NANDO:1200681","GARD:16618","NANDO:2200982","UMLS:C1863557"],"synonyms":[{"name":"Ohdo syndrome, SBBYS variant","type":"exact"},{"name":"SBBYSS","type":"exact"},{"name":"SBBYSS syndrome","type":"exact"},{"name":"Say-Barber-Biesecker-Young-Simpson syndrome","type":"exact"},{"name":"Young-Simpson syndrome","type":"related"},{"name":"blepharophimosis - intellectual disability syndrome, SBBYS type","type":"exact"},{"name":"hypothyroidism-dysmorphism-postaxial polydactyly-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0011365","terms_by_termid":{"MONDO:0011365":null},"xrefs":{"Monarch":{"xref_id":"0011365"}}}


id: GO:0052618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + L-glutamate + factor F420-0 = GDP + H+ + factor gamma-F420-1 + phosphate.","definition_xrefs":["MetaCyc:RXN-8080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme F420-0 gamma-glutamyl ligase activity","termid":"GO:0043773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"coenzyme F420-0:L-glutamate ligase activity","secondary_identifiers":["RHEA:30555","EC:6.3.2.31"],"termid":"GO:0052618"}


id: MONDO:0019945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solar urticaria (SU) is a rare and difficult to treat photosensitive disease, in which local skin swelling occurs within minutes of exposure to natural sunlight or even artificial light sources emitting ultraviolet radiation.","definition_xrefs":["Orphanet:97230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"solar urticaria","secondary_identifiers":["MEDGEN:538004","ICD9:708.8","SCTID:10347006","GARD:19353","ICD10CM:L56.3","icd11.foundation:64163683","MedDRA:10041307","UMLS:C0263610"],"termid":"MONDO:0019945","xrefs":{"Monarch":{"xref_id":"0019945"}}}


id: PBO:0074481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD specific E3 ubiquitin protein ligase 2 pseudogene 1","termid":"PBO:0074481"}


id: GO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum morphogenesis","secondary_identifiers":["GO:0003287"],"synonyms":[{"name":"interatrial septum morphogenesis","type":"exact"}],"termid":"GO:0060413"}


id: PBO:0069439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 704, pseudogene","termid":"PBO:0069439"}


id: PBO:0089081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22","termid":"PBO:0089081"}


id: MONDO:0019964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymic endocrine tumor is a rare, malignant, primary thymic neoplasm originating from neuroendocrine cells, presenting as a mass within the anterior mediastinum. Patients typically present with nonspecific symptoms, such as chest pain, cough, shortness of breath, or in some cases, superior vena cava syndrome, although patients could be asymptomatic during the early stages or present with multiple endocrine neoplasia type I. Ectopic production of ACTH and serotonin can lead to Cushing syndrome and carcinoid sydrome, respectively.","definition_xrefs":["Orphanet:97289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus neoplasm","termid":"MONDO:0005197"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymic neuroendocrine tumor","secondary_identifiers":["ONCOTREE:TNET","NCIT:C6430","GARD:19361"],"synonyms":[{"name":"neuroendocrine neoplasm of thymus","type":"exact"},{"name":"thymus NET","type":"exact"},{"name":"thymus neuroendocrine neoplasm","type":"exact"},{"name":"thymus neuroendocrine tumor","type":"exact"},{"name":"thymus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"thymus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0019964","xrefs":{"Monarch":{"xref_id":"0019964"}}}


id: PBO:0109194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofissin Atg44","termid":"PBO:0109194"}


id: GO:1900192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation","synonyms":[{"name":"activation of single-species biofilm formation","type":"narrow"},{"name":"up regulation of single-species biofilm formation","type":"exact"},{"name":"up-regulation of single-species biofilm formation","type":"exact"},{"name":"upregulation of single-species biofilm formation","type":"exact"}],"termid":"GO:1900192"}


id: PBO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 3","termid":"PBO:0061434"}


id: GO:0039558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces IRF7-dependent gene transcription, by promoting the sumoylation of IRF7, thereby disabling its activity.","definition_xrefs":["VZ:653","PMID:19694547","PMID:18635538"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation (obsolete GO:0039558)","synonyms":[{"name":"promotion of IRF-7 SUMOylation","type":"exact"},{"name":"suppression by virus of host interferon regulatory factor-7 activity by positive regulation of IRF7 sumoylation","type":"related"}],"termid":"GO:0039558"}


id: GO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder maturation","synonyms":[{"name":"gas bladder maturation","type":"exact"}],"termid":"GO:0048796"}


id: MONDO:0021050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the vagina. Representative examples of benign neoplasms include squamous papilloma and melanocytic nevus. Representative examples of malignant neoplasms include carcinoma, melanoma, and sarcoma.","definition_xrefs":["NCIT:C3437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal neoplasm","secondary_identifiers":["UMLS:C0042258","ICD9:239.5","ONCOTREE:VULVA","MEDGEN:22608","SCTID:126921000","EFO:1001447"],"synonyms":[{"name":"neoplasm of the vagina","type":"exact"},{"name":"neoplasm of vagina","type":"exact"},{"name":"tumor of the vagina","type":"exact"},{"name":"tumor of vagina","type":"exact"},{"name":"tumour of the vagina","type":"exact"},{"name":"tumour of vagina","type":"exact"},{"name":"vagina neoplasm","type":"exact"},{"name":"vagina neoplasm (disease)","type":"exact"},{"name":"vagina tumor","type":"exact"},{"name":"vagina tumour","type":"exact"},{"name":"vaginal neoplasm","type":"exact"},{"name":"vaginal tumor","type":"exact"},{"name":"vaginal tumour","type":"exact"}],"termid":"MONDO:0021050","xrefs":{"Monarch":{"xref_id":"0021050"}}}


id: PBO:0067716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 14","termid":"PBO:0067716"}


id: GO:0010924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of inositol-polyphosphate 5-phosphatase activity, the catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of inositol-polyphosphate 5-phosphatase activity (obsolete GO:0010924)","termid":"GO:0010924"}


id: MONDO:0100203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 1.","definition_xrefs":["PMID:27197630","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirovirus infectious disease","termid":"MONDO:0005940"},{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 1 infectious disease","synonyms":[{"name":"human respirovirus 1 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 1","type":"exact"},{"name":"infection due to human parainfluenza virus 1","type":"exact"},{"name":"parainfluenza 1 infection","type":"related"}],"termid":"MONDO:0100203","xrefs":{"Monarch":{"xref_id":"0100203"}}}


id: PBO:0080546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 5","termid":"PBO:0080546"}


id: PBO:0049036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 25","termid":"PBO:0049036"}


id: GO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin E","synonyms":[{"name":"response to prostaglandin E stimulus","type":"exact"}],"termid":"GO:0034695"}


id: PATO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a strait side and an arched side giving the bearer the form of the letter D.","definition_xrefs":["PATOC:AE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-shaped","termid":"PATO:0002357"}


id: PBO:0029529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_alpha-glucanase","termid":"PBO:0029529"}


id: PBO:0055257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2684","termid":"PBO:0055257"}


id: PBO:0062109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 7 pseudogene","termid":"PBO:0062109"}


id: GO:0071893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to nephric duct formation.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in nephric duct formation (obsolete GO:0071893)","synonyms":[{"name":"BMP signalling pathway involved in nephric duct formation","type":"exact"}],"termid":"GO:0071893"}


id: PBO:0058407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4776-2","termid":"PBO:0058407"}


id: PBO:0002845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex, histone acetyltransferase subunit Elp3 (predicted)","termid":"PBO:0002845"}


id: MONDO:0014083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the PIK3R1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 7, autosomal recessive","secondary_identifiers":["GARD:15918","MEDGEN:767603","UMLS:C3554689","DOID:0081139","OMIM:615214"],"synonyms":[{"name":"AGM7","type":"related"},{"name":"PIK3R1 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 7, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to PIK3R1 defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in PIK3R1","type":"exact"}],"termid":"MONDO:0014083","xrefs":{"Monarch":{"xref_id":"0014083"}}}


id: GO:0010596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell migration","termid":"GO:0010596"}


id: PBO:0014260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chromatid cohesion Gpn2 (predicted)","termid":"PBO:0014260"}


id: MONDO:0004582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the myocardium in acute rheumatic heart disease.","definition_xrefs":["NCIT:C35202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"},{"relation_name":"is_a","term_name":"rheumatic heart disease","termid":"MONDO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"rheumatic myocarditis","secondary_identifiers":["UMLS:C0155557","ICD9:391.9","DOID:8481","ICD9:398.0","icd11.foundation:1177212968","SCTID:195136004","MEDGEN:56370"],"synonyms":[{"name":"active rheumatic fever with myocarditis","type":"exact"},{"name":"acute rheumatic carditis","type":"exact"},{"name":"acute rheumatic myocarditis","type":"exact"},{"name":"acute rheumatic myocarditis (disorder) [ambiguous]","type":"exact"},{"name":"rheumatic degeneration of myocardium","type":"exact"},{"name":"rheumatic fever with myocarditis","type":"exact"},{"name":"rheumatic myocarditis","type":"exact"},{"name":"rheumatoid myocarditis","type":"exact"}],"termid":"MONDO:0004582","xrefs":{"Monarch":{"xref_id":"0004582"}}}


id: GO:0098517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which low humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity","termid":"GO:0098517"}


id: PR:O94361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1-acyl-sn-glycerol-3-phosphate acyltransferase delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C428.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.14","secondary_identifiers":["UniProtKB:O94361"],"synonyms":[{"name":"Spom972h-AGPAT4","type":"exact"}],"termid":"PR:O94361"}


id: PBO:0034156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_protein_structural_homology_relationship_with","termid":"PBO:0034156"}


id: FYPO:0003395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone, mediated by complex II, does not occur.","definition_xrefs":["PomBase:mah","GO:0006121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular respiration","termid":"FYPO:0000562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"abolished mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"abolished succinate cytochrome c oxidoreductase","type":"related"},{"name":"abolished succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"mitochondrial electron transport, succinate to ubiquinone, abolished","type":"exact"}],"termid":"FYPO:0003395"}


id: PBO:0073700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKAP1 antisense RNA 1","termid":"PBO:0073700"}


id: MONDO:0016258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon malignant neoplasm arising from the uterine corpus. It is characterized by the presence of a malignant epithelial component and a benign mesenchymal (usually fibrous) component.","definition_xrefs":["NCIT:C40182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine body mixed cancer","termid":"MONDO:0002879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus carcinofibroma","secondary_identifiers":["ICDO:8934/3","UMLS:C1883485","MEDGEN:364874","Orphanet:213605","GARD:20474"],"synonyms":[{"name":"Carcinofibroma of the corpus uteri","type":"related"},{"name":"uterine corpus Carcinofibroma","type":"exact"}],"termid":"MONDO:0016258","xrefs":{"Monarch":{"xref_id":"0016258"}}}


id: PBO:0083103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase encoded within the telomeric Y' element; Y' -helicase protein 1","termid":"PBO:0083103"}


id: PBO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex theta subunit Cct8","termid":"PBO:0003437"}


id: MONDO:0019173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rabies is a viral zoonosis leading to a fatal encephalopathy if not treated.","definition_xrefs":["Orphanet:770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabies","secondary_identifiers":["SCTID:14168008","UMLS:C0034494","GARD:7516","MESH:D011818","icd11.foundation:854762584","DOID:11260","MedDRA:10037742","ICD9:071","NCIT:C28182","ICD10CM:A82","MEDGEN:48308","NORD:1644"],"synonyms":[{"name":"lyssa","type":"exact"}],"termid":"MONDO:0019173","xrefs":{"Monarch":{"xref_id":"0019173"}}}


id: MONDO:0859765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis/schwannomatosis","termid":"MONDO:0859008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic schwannomatosis","secondary_identifiers":["MEDGEN:1843393","Orphanet:634492","UMLS:C5816779"],"termid":"MONDO:0859765","xrefs":{"Monarch":{"xref_id":"0859765"}}}


id: PBO:0089258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex polyribonucleotide 5'-hydroxyl-kinase subunit","termid":"PBO:0089258"}


id: PBO:0050311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 13","termid":"PBO:0050311"}


id: FYPO:0005659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is increased.","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"increased levels of meiotic crossover associated with a gene conversion event","type":"exact"}],"termid":"FYPO:0005659"}


id: PBO:0029346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_level","termid":"PBO:0029346"}


id: PBO:0075696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 1","termid":"PBO:0075696"}


id: PBO:0084416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major apurinic/apyrimidinic endonuclease; 3'-repair diesterase; involved in repair of DNA damage by oxidation and alkylating agents; also functions as a 3'-5' exonuclease to repair 7,8-dihydro-8-oxodeoxyguanosine; genetically interacts with NTG1 to maintain mitochondrial genome integrity","termid":"PBO:0084416"}


id: GO:0016461
data:
  {"annotated_genes":["SJAG_04001","SJAG_00938","SJAG_04781","SJAG_03011","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97197,95701,103568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045160"},{"annotations":[116477,108445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031475"}]},"cv_name":"cellular_component","definition":"A portmanteau term for myosins other than myosin II.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"unconventional myosin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005860"],"synonyms":[{"name":"non-muscle myosin","type":"related"}],"termid":"GO:0016461","terms_by_termid":{"GO:0031475":null,"GO:0045160":null}}


id: GO:0016856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in a hydroxy acid molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","secondary_identifiers":["EC:5.1.2.-"],"termid":"GO:0016856"}


id: PBO:0059008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocyte to macrophage differentiation associated 2","termid":"PBO:0059008"}


id: PBO:0054016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1346","termid":"PBO:0054016"}


id: MONDO:0019710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with predominant craniofacial involvement (obsolete MONDO:0019710)","termid":"MONDO:0019710","xrefs":{"Monarch":{"xref_id":"0019710"}}}


id: PBO:0080816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1","termid":"PBO:0080816"}


id: GO:0050378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate = UDP-alpha-D-galacturonate.","definition_xrefs":["EC:5.1.3.6","RHEA:11404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"UDP-glucuronate 4-epimerase activity","secondary_identifiers":["KEGG_REACTION:R01385","MetaCyc:UDP-GLUCURONATE-4-EPIMERASE-RXN"],"synonyms":[{"name":"UDP glucuronic epimerase activity","type":"related"},{"name":"UDP-D-galacturonic acid 4-epimerase activity","type":"related"},{"name":"UDP-galacturonate 4-epimerase activity","type":"related"},{"name":"UDPglucuronate 4-epimerase activity","type":"related"},{"name":"uridine diphospho-D-galacturonic acid","type":"related"},{"name":"uridine diphosphoglucuronate epimerase activity","type":"related"},{"name":"uridine diphosphoglucuronic epimerase activity","type":"related"}],"termid":"GO:0050378"}


id: GO:0034189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a very-low-density lipoprotein particle, a triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"very-low-density lipoprotein particle binding","synonyms":[{"name":"VLDL binding","type":"exact"},{"name":"very-low-density lipoprotein binding","type":"exact"}],"termid":"GO:0034189"}


id: MONDO:0019198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sympathetic ophthalmia (SO) is a bilateral granulomatous anterior uveitis usually occurring within the three months following trauma or a surgical procedure involving one eye.","definition_xrefs":["Orphanet:79098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panuveitis","termid":"MONDO:0017255"},{"relation_name":"is_a","term_name":"non-infectious anterior uveitis","termid":"MONDO:0017634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sympathetic ophthalmia","secondary_identifiers":["DOID:12029","ICD9:360.11","UMLS:C0029077","icd11.foundation:1639718137","MESH:D009879","MEDGEN:45203","EFO:1001205","GARD:18939","MedDRA:10042742","SCTID:75315001"],"synonyms":[{"name":"sympathetic ophthalmia","type":"exact"},{"name":"sympathetic uveitis","type":"exact"}],"termid":"MONDO:0019198","xrefs":{"Monarch":{"xref_id":"0019198"}}}


id: GO:0033611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of oxalate, the organic acid ethanedioate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxalate metabolic process","termid":"GO:0033609"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"oxalate catabolic process","synonyms":[{"name":"ethanedioate catabolic process","type":"exact"},{"name":"ethanedioic acid catabolic process","type":"exact"},{"name":"oxalate breakdown","type":"exact"},{"name":"oxalate catabolism","type":"exact"},{"name":"oxalate degradation","type":"exact"},{"name":"oxalic acid catabolic process","type":"exact"}],"termid":"GO:0033611"}


id: PBO:0047647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4","termid":"PBO:0047647"}


id: FYPO:0005983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of potassium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal potassium export","termid":"FYPO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased potassium export","synonyms":[{"name":"decreased cellular potassium export","type":"exact"},{"name":"decreased potassium export during mitotic cell cycle","type":"related"},{"name":"decreased potassium export during vegetative growth","type":"exact"},{"name":"decreased potassium export from cell","type":"exact"},{"name":"decreased potassium ion export","type":"exact"},{"name":"decreased potassium ion export across plasma membrane","type":"exact"},{"name":"reduced potassium export","type":"exact"}],"termid":"FYPO:0005983"}


id: PBO:0066450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 2, pseudogene","termid":"PBO:0066450"}


id: GO:1990434
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the lower end of a stereocilia tip link that provides the anchor in the stereocilia membrane at the tip of the stereocilium from which the tip link rises.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lower tip-link density","synonyms":[{"name":"LTLD","type":"exact"}],"termid":"GO:1990434"}


id: PBO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 9, pseudogene","termid":"PBO:0044796"}


id: MONDO:0030900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with paroxysmal dyskinesia or seizures","secondary_identifiers":["MEDGEN:1727046","UMLS:C5436894","OMIM:619150"],"synonyms":[{"name":"IDDPADS","type":"exact"}],"termid":"MONDO:0030900","xrefs":{"Monarch":{"xref_id":"0030900"}}}


id: PBO:0045328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK6 antisense RNA 1","termid":"PBO:0045328"}


id: GO:0160240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that promotes premature RNA polymerase II transcription termination of transcripts that are unfavorably configured for transcriptional elongation by releasing RNA polymerase II from bound DNA or promoting RNA polymerase II degradation.","definition_xrefs":["PMID:33385327","PMID:34762484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase II transcription initiation surveillance","termid":"GO:0160240"}


id: PBO:0091378
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds with high affinity to mammalian-type 5'-TTAGGG-3' telomeric repeats, and with very low affinity to less stringently conserved S. pombe telomeric repeats","termid":"PBO:0091378"}


id: PBO:0057114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200c","termid":"PBO:0057114"}


id: PBO:0049572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 9","termid":"PBO:0049572"}


id: PBO:0087124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of a Cet1p homodimer and two molecules of guanylyltransferase Ceg1p; Cet1p also has a role in regulation of RNAPII pausing at promoter-proximal sites; interaction between Cet1p and Ceg1p is required for Ceg1p nuclear import; mammalian enzyme is single bifunctional polypeptide; human homolog RNGTT can complement yeast cet1 null mutant","termid":"PBO:0087124"}


id: PBO:0044920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 6","termid":"PBO:0044920"}


id: SO:0000228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding tryptophanyl tRNA (SO:000271).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan_tRNA_primary_transcript","synonyms":[{"name":"tryptophan tRNA primary transcript","type":"exact"}],"termid":"SO:0000228"}


id: PBO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal cellulose binding domain protein","termid":"PBO:0001806"}


id: GO:0033970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-3-ureidopropanoate + H2O = H+ + malonate + urea.","definition_xrefs":["EC:3.5.1.95","RHEA:17361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-malonylurea hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07629","MetaCyc:3.5.1.95-RXN"],"synonyms":[{"name":"3-oxo-3-ureidopropanoate amidohydrolase (urea- and malonate-forming) activity","type":"related"},{"name":"ureidomalonase activity","type":"related"}],"termid":"GO:0033970"}


id: PBO:0047835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box Q1","termid":"PBO:0047835"}


id: PBO:0066787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 86","termid":"PBO:0066787"}


id: GO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host protein.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host molecular function (obsolete GO:0039507)","synonyms":[{"name":"down regulation by virus of host protein function","type":"exact"},{"name":"down-regulation by virus of host protein function","type":"exact"},{"name":"inhibition by virus of host protein function","type":"narrow"},{"name":"inhibition of host protein function","type":"narrow"},{"name":"negative regulation by virus of host molecular function","type":"exact"},{"name":"negative regulation by virus of host protein function","type":"exact"}],"termid":"GO:0039507"}


id: PBO:0070702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 6","termid":"PBO:0070702"}


id: MONDO:0024463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 1","secondary_identifiers":["OMIM:233300","GARD:18039","DOID:0080493","MEDGEN:215397","UMLS:C0949595"],"synonyms":[{"name":"ODG1","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XXGD","type":"related"},{"name":"gonadal dysgenesis, 20 type","type":"related"},{"name":"gonadal dysgenesis, XX type","type":"related"},{"name":"ovarian dysgenesis 1","type":"exact"},{"name":"ovarian dysgenesis, hypergonadotropic, autosomal recessive","type":"related"},{"name":"ovarian dysgenesis, hypergonadotropic, with normal karyotype","type":"related"},{"name":"ovarian failure, hypergonadotropic","type":"related"}],"termid":"MONDO:0024463","xrefs":{"Monarch":{"xref_id":"0024463"}}}


id: MONDO:0019622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic interstitial pneumonia characterized by chronic inflammation and fibrosis in the interstitial lung tissue. It includes cases that cannot be classified into one of the other types of idiopathic interstitial pneumonia.","definition_xrefs":["NCIT:C35717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-specific interstitial pneumonia","secondary_identifiers":["NANDO:1200419","DOID:2801","MEDGEN:220936","GARD:19167","ICD9:516.8","Orphanet:91364","SCTID:129452008","UMLS:C1290344"],"synonyms":[{"name":"NSIP","type":"exact"},{"name":"non-specific idiopathic interstitial pneumonia","type":"exact"},{"name":"nonspecific interstitial pneumonia","type":"exact"}],"termid":"MONDO:0019622","xrefs":{"Monarch":{"xref_id":"0019622"}}}


id: GO:0106362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = H+ + N(omega)-(N-acetyl-beta-D-glucosaminyl)-L-arginyl-[protein] + UDP.","definition_xrefs":["GOC:sp","RHEA:66632","PMID:30619781","PMID:23955153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-acetylglucosaminyltransferase activity","termid":"GO:0016262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-arginine N-acetylglucosaminyltransferase activity","termid":"GO:0106362"}


id: GO:0080047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-galactose + phosphate = beta-L-galactose-1-phosphate + GDP.","definition_xrefs":["PMID:18463094","PMID:17462988","RHEA:27698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"GDP-L-galactose phosphorylase activity","secondary_identifiers":["GO:0010475","EC:2.7.7.69","MetaCyc:RXNQT-4141"],"synonyms":[{"name":"GDP:galactose-1-phosphate guanyltransferase activity","type":"exact"},{"name":"galactose-1-phosphate guanylyltransferase (GDP) activity","type":"exact"}],"termid":"GO:0080047"}


id: GO:0061686
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103945],"is_not":false,"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (hercynine) + O2 = hercynylcysteine sulfoxide + H2O.","definition_xrefs":["GOC:dph","PMID:24828577","PMID:4276459","RHEA:42704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.3.10"],"synonyms":[{"name":"hercynylcysteine S-oxide synthase","type":"exact"},{"name":"hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0061686","terms_by_termid":{"GO:0061686":null}}


id: PR:O94303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his4 gene.","definition_xrefs":["UniProtKB:O94303","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazole glycerol phosphate synthase hisHF (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC418.01c","synonyms":[{"name":"IGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IGPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ImGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his4","type":"exact"}],"termid":"PR:O94303"}


id: PBO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 7","termid":"PBO:0043512"}


id: PBO:0086832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function, potential Cdc28p substrate; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YGR035C has a paralog, YLR346C, that arose from the whole genome duplication","termid":"PBO:0086832"}


id: GO:0047856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydrocoumarin + H2O = 3-(2-hydroxyphenyl)propanoate + H+.","definition_xrefs":["RHEA:10360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dihydrocoumarin hydrolase activity","secondary_identifiers":["EC:3.1.1.35","KEGG_REACTION:R03692","MetaCyc:DIHYDROCOUMARIN-LIPASE-RXN"],"synonyms":[{"name":"3,4-dihydrocoumarin hydrolase activity","type":"exact"},{"name":"dihydrocoumarin lactonohydrolase activity","type":"related"},{"name":"dihydrocoumarin lipase activity","type":"exact"}],"termid":"GO:0047856"}


id: GO:0050662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme binding (obsolete GO:0050662)","termid":"GO:0050662"}


id: PBO:0088097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unusual phosphatidylinositol transfer protein (PITP) that binds heme; similar to Sec14p; founding member of conserved class of fungal hemoproteins; exhibits PI- but not PC-transfer activity; localizes to peripheral endoplasmic reticulum, cytosol, and microsomes; partially relocalizes to plasma membrane upon DNA replication stress","termid":"PBO:0088097"}


id: MONDO:0022057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing, locally invasive neoplasm arising from tooth-forming tissues. It most often grows intraosseously in the mandible and less frequently in the maxilla. In a minority of cases it grows extraosseously in the gingiva. It is characterized by the presence of a fibrous stroma, epithelial cells with abundant eosinophilic cytoplasm, and amyloid material which is often calcified. Small tumors may be successfully treated with enucleation. Local resection is usually required for larger tumors. Recurrences have been reported in a minority of cases.","definition_xrefs":["NCIT:C54301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"calcifying epithelial odontogenic tumor","secondary_identifiers":["ICDO:9340/0","UMLS:C0334574","MEDGEN:87266","MESH:C537961"],"synonyms":[{"name":"CEOT","type":"related"},{"name":"Pindborg tumor","type":"exact"},{"name":"Pindborg tumour","type":"exact"},{"name":"calcifying epithelial odontogenic tumor","type":"exact"}],"termid":"MONDO:0022057","xrefs":{"Monarch":{"xref_id":"0022057"}}}


id: MONDO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant histiocytic disease (obsolete MONDO:0002346)","termid":"MONDO:0002346","xrefs":{"Monarch":{"xref_id":"0002346"}}}


id: PBO:0057010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 101-1","termid":"PBO:0057010"}


id: MONDO:1011850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotising myelopathy, non-human animal","secondary_identifiers":["OMIA:000706"],"termid":"MONDO:1011850","xrefs":{"Monarch":{"xref_id":"1011850"}}}


id: GO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains. In Saccharomyces cerevisiae, the complex comprises Ubc13p and Mms2p; in human it comprises UBE2N and UBE2V1/UBE2V2; and in plants UBC35/UBC36 and UEV1A/UEV1B/UEV1C/UEV1D-4.","definition_xrefs":["PMID:16129784","GOC:sjm","PMID:15772086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"UBC13-MMS2 complex","synonyms":[{"name":"BEN-UEV1A complex","type":"exact"},{"name":"UBE2N/UBE2NL complex","type":"narrow"},{"name":"UBE2V1/UBE2V2 complex","type":"narrow"},{"name":"Uev1A-ben complex","type":"narrow"},{"name":"ubc-13-uev-1 complex","type":"narrow"}],"termid":"GO:0031372"}


id: GO:0061206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephros are generated and organized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephros morphogenesis","synonyms":[{"name":"Wolffian body morphogenesis","type":"exact"}],"termid":"GO:0061206"}


id: GO:0070484
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dehydro-D-arabinono-1,4-lactone, the gamma-lactone (5R)-3,4-dihydroxy-5-(hydroxymethyl)furan-2(5H)-one.","definition_xrefs":["GOC:mah","GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehydro-D-arabinono-1,4-lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dehydro-D-arabinono-1,4-lactone metabolism","type":"exact"}],"termid":"GO:0070484","terms_by_termid":{"GO:0070485":null}}


id: FYPO:0005283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to inositol starvation.","definition_xrefs":["PomBase:mah","PMID:19606215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability upon inositol starvation","synonyms":[{"name":"increased cell population viability upon inositol starvation","type":"exact"},{"name":"increased viability during inositol starvation","type":"exact"},{"name":"increased viability upon inositol depletion","type":"exact"},{"name":"increased viability upon inositol deprivation","type":"exact"},{"name":"increased viability upon inositol limitation","type":"exact"}],"termid":"FYPO:0005283"}


id: GO:0061622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways through a glucose-1-phosphate intermediate that result in the catabolism of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0055086","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glycolytic process through glucose-1-phosphate","termid":"GO:0061622"}


id: FYPO:0001373
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119535,119534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[119513,119505,119517,119506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to medial cortex","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to medial cortex","type":"exact"},{"name":"abnormal protein localization to medial ring","type":"exact"}],"termid":"FYPO:0001373","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: FYPO:0007836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased nucleosome occupancy at subtelomere","synonyms":[{"name":"increased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"}],"termid":"FYPO:0007836"}


id: PBO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as ncRNA","termid":"PBO:0000406"}


id: GO:1901091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"negatively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein tetramerization","synonyms":[{"name":"down regulation of protein tetramer assembly","type":"exact"},{"name":"down regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein tetramer formation","type":"exact"},{"name":"down regulation of protein tetramerization","type":"exact"},{"name":"down-regulation of protein tetramer assembly","type":"exact"},{"name":"down-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein tetramer formation","type":"exact"},{"name":"down-regulation of protein tetramerization","type":"exact"},{"name":"downregulation of protein tetramer assembly","type":"exact"},{"name":"downregulation of protein tetramer biosynthesis","type":"exact"},{"name":"downregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein tetramer formation","type":"exact"},{"name":"downregulation of protein tetramerization","type":"exact"},{"name":"inhibition of protein tetramer assembly","type":"narrow"},{"name":"inhibition of protein tetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein tetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein tetramer formation","type":"narrow"},{"name":"inhibition of protein tetramerization","type":"narrow"},{"name":"negative regulation of protein tetramer assembly","type":"exact"},{"name":"negative regulation of protein tetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein tetramer formation","type":"exact"}],"termid":"GO:1901091"}


id: PBO:0109225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 6","termid":"PBO:0109225"}


id: MONDO:1012454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy with fiber-type disproportion, non-human animal","termid":"MONDO:1011804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myopathy with fiber-type disproportion, dog","secondary_identifiers":["OMIA:001796-9615"],"termid":"MONDO:1012454","xrefs":{"Monarch":{"xref_id":"1012454"}}}


id: PBO:0062593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 3","termid":"PBO:0062593"}


id: GO:0031411
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular non-membrane-bounded organelle; a hollow structure made of protein, which usually has the form of a cylindrical tube closed by conical end caps. By regulating their relative gas vesicle content, aquatic microbes are able to perform vertical migrations.","definition_xrefs":["PMID:22147705","PMID:8177173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gas vesicle","synonyms":[{"name":"gas vacuole","type":"related"}],"termid":"GO:0031411"}


id: MONDO:0003287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the central nervous system. It is characterized by the presence of intersecting fascicles composed of spindle cells that often lack mitotic activity.","definition_xrefs":["NCIT:C6998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system leiomyoma","secondary_identifiers":["UMLS:C1334382","MEDGEN:232695","DOID:5126"],"synonyms":[{"name":"central nervous system leiomyoma","type":"exact"},{"name":"leiomyoma of CNS","type":"exact"},{"name":"leiomyoma of central nervous system","type":"exact"},{"name":"leiomyoma of the CNS","type":"exact"},{"name":"leiomyoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003287","xrefs":{"Monarch":{"xref_id":"0003287"}}}


id: PBO:0085074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Novel subunit of the vacuolar transporter chaperone complex; vacuolar transmembrane protein that regulates biosynthesis of polyphosphate; deletion reduces and overexpression increases polyP accumulation; SPX domain (Syg1, Pho81, Xpr1)-containing protein involved in phosphate homeostasis; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085074"}


id: PBO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member C, pseudogene","termid":"PBO:0048908"}


id: PBO:0063185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox interacting protein 1","termid":"PBO:0063185"}


id: PBO:0050243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 21","termid":"PBO:0050243"}


id: PBO:0063032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein interacting protein 2B","termid":"PBO:0063032"}


id: GO:0016781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of two phosphate groups from a donor, such as ATP, to two different acceptors.","definition_xrefs":["EC:2.7.9.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}


id: GO:0051257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle midzone, the area in the center of the spindle where the spindle microtubules from opposite poles overlap, as a part of the process of meiosis.","definition_xrefs":["GOC:ai","GOC:expert_rg","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone assembly","termid":"GO:0051255"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0000226","GO:0008150","GO:0044085","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle midzone assembly","synonyms":[{"name":"meiotic spindle midzone biogenesis","type":"exact"},{"name":"meiotic spindle midzone biosynthesis","type":"exact"},{"name":"meiotic spindle midzone formation","type":"exact"},{"name":"spindle midzone assembly involved in meiosis","type":"exact"},{"name":"spindle midzone biogenesis involved in meiosis","type":"exact"},{"name":"spindle midzone biosynthesis involved in meiosis","type":"exact"},{"name":"spindle midzone formation involved in meiosis","type":"exact"}],"termid":"GO:0051257"}


id: GO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of NAD+ kinase activity (obsolete GO:0033672)","synonyms":[{"name":"NAD+ kinase activator","type":"narrow"},{"name":"stimulation of NAD+ kinase activity","type":"narrow"},{"name":"up regulation of NAD+ kinase activity","type":"exact"},{"name":"up-regulation of NAD+ kinase activity","type":"exact"},{"name":"upregulation of NAD+ kinase activity","type":"exact"}],"termid":"GO:0033672"}


id: PBO:0078096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 4","termid":"PBO:0078096"}


id: MONDO:0013432
data:
  {"annotated_genes":["SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87253],"is_not":false,"summary":null,"term":"MONDO:0013432"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the CDC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15712","OMIM:613805","UMLS:C3151126","MEDGEN:462476","DOID:0080516"],"synonyms":[{"name":"CDC6 Meier-Gorlin syndrome","type":"exact"},{"name":"MGORS5","type":"related"},{"name":"Meier-GORLIN syndrome 5","type":"related"},{"name":"Meier-Gorlin syndrome 5","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in CDC6","type":"exact"},{"name":"Meier-Gorlin syndrome type 5","type":"exact"}],"termid":"MONDO:0013432","terms_by_termid":{"MONDO:0013432":null},"xrefs":{"Monarch":{"xref_id":"0013432"}}}


id: GO:0002764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately leading to the activation, perpetuation, or inhibition of an immune response.","definition_xrefs":["ISBN:0781735149","PMID:15771571","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"immune response-regulating signaling pathway","synonyms":[{"name":"immune response-regulating signalling pathway","type":"exact"}],"termid":"GO:0002764"}


id: MOD:01838
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine.","definition_xrefs":["PubMed:2544544","RESID:AA0123#LYS","PubMed:19155267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine (Lys)","synonyms":[{"name":"(2R,9S)-lysinoalanine","type":"exact"},{"name":"(2S)-2-amino-6-([(2R)-2-amino-2-carboxyethyl]amino)hexanoic acid","type":"exact"},{"name":"L-lysinoalanine","type":"exact"},{"name":"LAL","type":"exact"},{"name":"MOD_RES Lysino-D-alanine (Lys)","type":"exact"},{"name":"N-epsilon-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"N6-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"alaninolysine","type":"exact"},{"name":"lysino-D-alanine","type":"exact"}],"termid":"MOD:01838"}


id: MONDO:0011364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the STRC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 16","secondary_identifiers":["UMLS:C1863561","MEDGEN:350211","GARD:22597","DOID:0110471","MESH:C566339","OMIM:603720"],"synonyms":[{"name":"DFNB16","type":"narrow"},{"name":"STRC autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in STRC","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 16","type":"exact"},{"name":"deafness, autosomal recessive 16","type":"narrow"},{"name":"deafness, autosomal recessive type 16","type":"narrow"}],"termid":"MONDO:0011364","xrefs":{"Monarch":{"xref_id":"0011364"}}}


id: PBO:0068107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 414","termid":"PBO:0068107"}


id: PBO:0069722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1003, pseudogene","termid":"PBO:0069722"}


id: PBO:0067242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 314, pseudogene","termid":"PBO:0067242"}


id: GO:1901384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"},{"relation_name":"positively_regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chorionic trophoblast cell proliferation","synonyms":[{"name":"activation of chorionic trophoblast cell proliferation","type":"narrow"},{"name":"up regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"up-regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"upregulation of chorionic trophoblast cell proliferation","type":"exact"}],"termid":"GO:1901384"}


id: PBO:0064007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 41","termid":"PBO:0064007"}


id: PBO:0041839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 19","termid":"PBO:0041839"}


id: MONDO:0016742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor of the central nervous system characterized by the presence of at least two types of germ cell neoplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed extragonadal germ cell cancer","termid":"MONDO:0000524"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed germ cell tumor of central nervous system","secondary_identifiers":["MEDGEN:233713","UMLS:C1334785","GARD:20736","Orphanet:252021","NCIT:C7016"],"synonyms":[{"name":"CNS mixed germ cell tumor","type":"exact"},{"name":"CNS mixed germ cell tumour","type":"exact"},{"name":"central nervous system mixed germ cell tumor","type":"exact"},{"name":"central nervous system mixed germ cell tumour","type":"exact"},{"name":"mixed germ cell neoplasm of the central nervous system","type":"exact"},{"name":"mixed germ cell tumor of CNS","type":"exact"},{"name":"mixed germ cell tumor of the CNS","type":"exact"},{"name":"mixed germ cell tumor of the central nervous system","type":"exact"},{"name":"mixed germ cell tumour of CNS","type":"exact"},{"name":"mixed germ cell tumour of the CNS","type":"exact"},{"name":"mixed germ cell tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0016742","xrefs":{"Monarch":{"xref_id":"0016742"}}}


id: PBO:0068038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 343","termid":"PBO:0068038"}


id: PBO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.3","termid":"PBO:0001055"}


id: PBO:0070091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 5 pseudogene","termid":"PBO:0070091"}


id: MONDO:0010145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibia, absence of, with congenital deafness","secondary_identifiers":["MESH:C564764","MEDGEN:336413","UMLS:C1848758","OMIM:275230"],"synonyms":[{"name":"tibia, absence of, with congenital deafness","type":"exact"}],"termid":"MONDO:0010145","xrefs":{"Monarch":{"xref_id":"0010145"}}}


id: PBO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_degradation_during_vegetative_growth","termid":"PBO:0035784"}


id: MONDO:0013122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary congenital glaucoma","termid":"MONDO:0000365"},{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, D","secondary_identifiers":["UMLS:C2751316","GARD:18226","MEDGEN:416524","OMIM:613086","MESH:C567765"],"synonyms":[{"name":"GLC3D","type":"related"},{"name":"glaucoma 3, primary congenital, D","type":"exact"},{"name":"glaucoma 3, primary congenital, type D","type":"exact"}],"termid":"MONDO:0013122","xrefs":{"Monarch":{"xref_id":"0013122"}}}


id: PBO:0043465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 6","termid":"PBO:0043465"}


id: PBO:0046620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 1, envelope","termid":"PBO:0046620"}


id: PBO:0041485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 98","termid":"PBO:0041485"}


id: GO:1902886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proteasome-activating ATPase activity.","definition_xrefs":["PMID:23995839","GOC:di","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of proteasome-activating ATPase activity (obsolete GO:1902886)","synonyms":[{"name":"down regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasomal ATPase activity","type":"exact"},{"name":"down regulation of proteasome channel gating activity","type":"narrow"},{"name":"down regulation of proteasome channel opening activity","type":"narrow"},{"name":"down regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"down-regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ATPase activity","type":"exact"},{"name":"down-regulation of proteasome channel gating activity","type":"narrow"},{"name":"down-regulation of proteasome channel opening activity","type":"narrow"},{"name":"down-regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"downregulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ATPase activity","type":"exact"},{"name":"downregulation of proteasome channel gating activity","type":"narrow"},{"name":"downregulation of proteasome channel opening activity","type":"narrow"},{"name":"downregulation of proteasome-activating ATPase activity","type":"exact"},{"name":"inhibition of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasomal ATPase activity","type":"narrow"},{"name":"inhibition of proteasome channel gating activity","type":"narrow"},{"name":"inhibition of proteasome channel opening activity","type":"narrow"},{"name":"inhibition of proteasome-activating ATPase activity","type":"narrow"},{"name":"negative regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"negative regulation of proteasomal ATPase activity","type":"exact"},{"name":"negative regulation of proteasome channel gating activity","type":"narrow"},{"name":"negative regulation of proteasome channel opening activity","type":"narrow"}],"termid":"GO:1902886"}


id: PBO:0086228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that inhibits barbed-end actin filament elongation; interacts with Rvs167p; null mutant is viable and displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086228"}


id: PBO:0012223
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD3","termid":"PBO:0012223"}


id: SO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence corresponding to a known motif.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_motif","termid":"SO:0001683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_motif","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:nucleotide_motif","type":"exact"},{"name":"nucleotide motif","type":"exact"}],"termid":"SO:0000714"}


id: MONDO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the radial nerve. Clinical features include weakness of elbow extension, elbow flexion, supination of the forearm, wrist and finger extension, and thumb abduction. Sensation may be impaired over regions of the dorsal forearm. Common sites of compression or traumatic injury include the axilla and radial groove of the humerus.","definition_xrefs":["MESH:D020425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial neuropathy","secondary_identifiers":["DOID:12171","UMLS:C0748226","SCTID:16644004","MEDGEN:148185"],"synonyms":[{"name":"peripheral neuropathy of radial nerve","type":"exact"},{"name":"radial nerve peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001459","xrefs":{"Monarch":{"xref_id":"0001459"}}}


id: PBO:0029154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cumene_hydroperoxide","termid":"PBO:0029154"}


id: GO:0099554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of gaseous molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}


id: PBO:0044667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DET1 and DDB1 associated 1","termid":"PBO:0044667"}


id: PBO:0074057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 36","termid":"PBO:0074057"}


id: GO:1901586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of acid-sensing ion channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of acid-sensing ion channel activity (obsolete GO:1901586)","synonyms":[{"name":"down regulation of ASIC activity","type":"exact"},{"name":"down regulation of acid-sensing ion channel activity","type":"exact"},{"name":"down-regulation of ASIC activity","type":"exact"},{"name":"down-regulation of acid-sensing ion channel activity","type":"exact"},{"name":"downregulation of ASIC activity","type":"exact"},{"name":"downregulation of acid-sensing ion channel activity","type":"exact"},{"name":"inhibition of ASIC activity","type":"exact"},{"name":"inhibition of acid-sensing ion channel activity","type":"narrow"},{"name":"negative regulation of ASIC activity","type":"exact"}],"termid":"GO:1901586"}


id: SO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regional centromere is a large modular centromere found in fission yeast and higher eukaryotes. It consist of a central core region flanked by inverted inner and outer repeat regions.","definition_xrefs":["SO:vw","PMID:7502067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere","termid":"SO:0000577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere","synonyms":[{"name":"regional centromere","type":"exact"}],"termid":"SO:0001795"}


id: GO:1903534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000058","PMID:12018418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of lactose biosynthetic process","synonyms":[{"name":"regulation of lactose anabolism","type":"exact"},{"name":"regulation of lactose biosynthesis","type":"exact"},{"name":"regulation of lactose formation","type":"exact"},{"name":"regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903534"}


id: GO:0140586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Bridging together a cis-regulatory element and a terminator DNA sequences on the chromatin, holding two loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:19933151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin loop anchoring activity","termid":"GO:0140587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0060090"],"is_obsolete":false,"name":"promoter-terminator loop anchoring activity","synonyms":[{"name":"terminator-promoter loop anchoring activity","type":"exact"}],"termid":"GO:0140586"}


id: GO:1905157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photosynthesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:7592491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"positively_regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photosynthesis","synonyms":[{"name":"activation of photosynthesis","type":"narrow"},{"name":"up regulation of photosynthesis","type":"exact"},{"name":"up-regulation of photosynthesis","type":"exact"},{"name":"upregulation of photosynthesis","type":"exact"}],"termid":"GO:1905157"}


id: PBO:0067880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 182","termid":"PBO:0067880"}


id: GO:1905647
data:
  {"annotated_genes":["SJAG_04718","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100675,101537],"is_not":false,"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of proline from outside of a cell into the cytoplasmic compartment.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline transmembrane transport","termid":"GO:0035524"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04637":null,"SJAG_04718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"proline import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902825"],"synonyms":[{"name":"proline import into cell","type":"exact"}],"termid":"GO:1905647","terms_by_termid":{"GO:1905647":null}}


id: PBO:0047794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXF2 divergent transcript","termid":"PBO:0047794"}


id: MONDO:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alopecia-mental retardation syndrome (obsolete MONDO:0000006)","termid":"MONDO:0000006","xrefs":{"Monarch":{"xref_id":"0000006"}}}


id: SO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U1 is a small nuclear RNA (snRNA) component of the spliceosome (involved in pre-mRNA splicing). Its 5' end forms complementary base pairs with the 5' splice junction, thus defining the 5' donor site of an intron. There are significant differences in sequence and secondary structure between metazoan and yeast U1 snRNAs, the latter being much longer (568 nucleotides as compared to 164 nucleotides in human). Nevertheless, secondary structure predictions suggest that all U1 snRNAs share a 'common core' consisting of helices I, II, the proximal region of III, and IV.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U1_snRNA"],"synonyms":[{"name":"U1 small nuclear RNA","type":"exact"},{"name":"U1 snRNA","type":"exact"},{"name":"small nuclear RNA U1","type":"exact"},{"name":"snRNA U1","type":"exact"}],"termid":"SO:0000391"}


id: PBO:0066041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1A, member of RAS oncogene family","termid":"PBO:0066041"}


id: PBO:0002921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp9","termid":"PBO:0002921"}


id: PBO:0031436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation","termid":"PBO:0031436"}


id: PBO:0027477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-single_cell_division_prior_to_G0_entry","termid":"PBO:0027477"}


id: PBO:0091040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPANK1 ortholog","termid":"PBO:0091040"}


id: PBO:0036238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human c22orf39 ortholog","termid":"PBO:0036238"}


id: MONDO:0011098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the RNASEL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 1","secondary_identifiers":["GARD:15334","MEDGEN:1648436","UMLS:C4722327","OMIM:601518"],"synonyms":[{"name":"HPC1","type":"related"},{"name":"Prca1","type":"related"},{"name":"RNASEL familial prostate cancer","type":"exact"},{"name":"familial prostate cancer caused by mutation in RNASEL","type":"exact"},{"name":"prostate cancer 1","type":"exact"},{"name":"prostate cancer, hereditary, 1","type":"exact"},{"name":"prostate cancer, hereditary, type 1","type":"exact"}],"termid":"MONDO:0011098","xrefs":{"Monarch":{"xref_id":"0011098"}}}


id: SO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomerase RNA gene is a non coding RNA gene the RNA product of which is a component of telomerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase_RNA_gene","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Telomerase_RNA_component"],"synonyms":[{"name":"TERC","type":"exact"},{"name":"Telomerase RNA component","type":"exact"},{"name":"telomerase RNA gene","type":"exact"}],"termid":"SO:0001643"}


id: GO:0051784
data:
  {"annotated_genes":["SJAG_04259","SJAG_02451","SJAG_01680","SJAG_04699","SJAG_03438","SJAG_04884","SJAG_01297","SJAG_01330","SJAG_03126","SJAG_04287","SJAG_01082","SJAG_00364","SJAG_00266","SJAG_03327","SJAG_02336","SJAG_00883","SJAG_01679","SJAG_04999","SJAG_04126","SJAG_01837","SJAG_03681","SJAG_03353","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104211,91061,107548,114087,116202,99914,112269,108568,114574],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[114800,106637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116361,89400,114564,106934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[114803,106639,110216,115858,99758,102117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[94536],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[108286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[114092],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116975],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101659],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"negatively_regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nuclear division","type":"exact"},{"name":"down-regulation of nuclear division","type":"exact"},{"name":"downregulation of nuclear division","type":"exact"},{"name":"inhibition of nuclear division","type":"narrow"}],"termid":"GO:0051784","terms_by_termid":{"GO:0007094":null,"GO:0045128":null,"GO:0051598":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0065918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit alpha","termid":"PBO:0065918"}


id: PBO:0113175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase; promotes global demethylation of H3K4 and represses noncoding intergenic transcription during sporulation; removes methyl groups added by Set1p; phosphorylation by Tpk2p during glycolysis inhibits activity, nuclear localization, chromatin binding and promotes Not4p Ub-mediated degradation; negatively regulated by H3K14 acetylation; regulates sporulation timing by extending period of active transcription; regulates rDNA silencing; human homolog is JARID1C","termid":"PBO:0113175"}


id: GO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"exact"},{"name":"Moco metabolism","type":"exact"},{"name":"molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0043545"}


id: PBO:0044457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 36, pseudogene","termid":"PBO:0044457"}


id: GO:0014918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which pressure natriuresis increases rate of natriuresis.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of natriuresis by pressure natriuresis (obsolete GO:0014918)","synonyms":[{"name":"positive regulation of natriuresis by pressure natriuresis","type":"exact"}],"termid":"GO:0014918"}


id: PBO:0086681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; YLR157W-D has a paralog, YLR161W, that arose from a segmental duplication","termid":"PBO:0086681"}


id: GO:0061028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial barrier","termid":"GO:0061028"}


id: MONDO:0100072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal diabetes, congenital sensorineural hearing loss and congenital cataracts is characterized by the three primary phenotypes of neonatal diabetes, congenital sensorineural hearing loss and congenital cataracts. Cases have reported additional varying phenotypes, including optic atrophy, hypothyroidism, severe neonatal hypotonia in males, developmental delay, facial abnormalities, and a few other more rare phenotypes. The severity and congenital onset of the phenotypes distinguish these patients from Wolfram-like syndrome patients.","definition_xrefs":["PMID:28468959","PMID:27217304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal diabetes, congenital sensorineural hearing loss and congenital cataracts","termid":"MONDO:0100072","xrefs":{"Monarch":{"xref_id":"0100072"}}}


id: GO:0071735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgG isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgG immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgG immunoglobulin complex","synonyms":[{"name":"IgG1","type":"narrow"},{"name":"IgG2","type":"narrow"},{"name":"IgG2a","type":"narrow"},{"name":"IgG2b","type":"narrow"},{"name":"IgG2c","type":"narrow"},{"name":"IgG3","type":"narrow"},{"name":"IgG4","type":"narrow"}],"termid":"GO:0071735"}


id: PBO:0065223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 5","termid":"PBO:0065223"}


id: MONDO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal malignant growth of the cells that comprise the cranial nerve.","definition_xrefs":["NCIT:C3571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant cranial nerve neoplasm","secondary_identifiers":["ICD9:192.0","MEDGEN:57567","UMLS:C0153644","SCTID:188307009","DOID:2815"],"synonyms":[{"name":"cancer of cranial nerve","type":"exact"},{"name":"cranial nerve cancer","type":"exact"},{"name":"cranial nerve malignant neoplasm","type":"related"},{"name":"cranial nerve neoplasm, malignant","type":"exact"},{"name":"malignant cranial nerve neoplasm","type":"exact"},{"name":"malignant cranial nerve tumor","type":"exact"},{"name":"malignant cranial nerve tumour","type":"exact"},{"name":"malignant neoplasm of cranial nerve","type":"exact"},{"name":"malignant neoplasm of cranial nerves","type":"exact"},{"name":"malignant neoplasm of the cranial nerve","type":"exact"},{"name":"malignant tumor of cranial nerve","type":"exact"},{"name":"malignant tumor of the cranial nerve","type":"exact"},{"name":"malignant tumour of cranial nerve","type":"exact"},{"name":"malignant tumour of the cranial nerve","type":"exact"}],"termid":"MONDO:0002433","xrefs":{"Monarch":{"xref_id":"0002433"}}}


id: MONDO:1011190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal stenosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal stenosis, non-human animal","termid":"MONDO:1010303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal stenosis, cattle","secondary_identifiers":["OMIA:000947-9913"],"termid":"MONDO:1011190","xrefs":{"Monarch":{"xref_id":"1011190"}}}


id: GO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin.","definition_xrefs":["EC:3.1.6.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"iduronate-2-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-1678650","Reactome:R-HSA-1793182","Reactome:R-HSA-2262743","MetaCyc:3.1.6.13-RXN","Reactome:R-HSA-9036046"],"synonyms":[{"name":"2-sulfo-L-iduronate 2-sulfatase activity","type":"related"},{"name":"L-iduronate 2-sulfate sulfatase activity","type":"related"},{"name":"L-iduronate-2-sulfate 2-sulfohydrolase activity","type":"related"},{"name":"L-idurono sulfate sulfatase activity","type":"related"},{"name":"L-iduronosulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"iduronate sulfatase activity","type":"related"},{"name":"iduronate sulfate sulfatase activity","type":"related"},{"name":"iduronate-2-sulfate sulfatase activity","type":"related"},{"name":"iduronate-2-sulphatase activity","type":"exact"},{"name":"iduronide-2-sulfate sulfatase activity","type":"related"},{"name":"idurono-2-sulfatase activity","type":"related"},{"name":"sulfo-L-iduronate sulfatase activity","type":"related"},{"name":"sulfoiduronate sulfohydrolase activity","type":"related"}],"termid":"GO:0004423"}


id: GO:2000588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:2000586"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"positive regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000588"}


id: PBO:0050284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 1","termid":"PBO:0050284"}


id: PR:O74986
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA endonuclease ctp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.08","synonyms":[{"name":"SAE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ctp1","type":"exact"},{"name":"double-strand break repair protein ctp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 38 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nbs1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation in the absence of SPO11 protein 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74986"}


id: PATO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000254 vibrissae reflex (obsolete PATO:0000254)","termid":"PATO:0000254"}


id: GO:1903009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a proteasome complex into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteasome complex disassembly","synonyms":[{"name":"26S proteasome disassembly","type":"narrow"},{"name":"proteasome degradation","type":"exact"},{"name":"proteasome disassembly","type":"exact"}],"termid":"GO:1903009"}


id: PBO:0038413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_relation_between_entities","termid":"PBO:0038413"}


id: GO:0009660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an amyloplast. An amyloplast is a plastid whose main function is to synthesize and store starch.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloplast organization","synonyms":[{"name":"amyloplast organisation","type":"exact"},{"name":"amyloplast organization and biogenesis","type":"related"}],"termid":"GO:0009660"}


id: _global:regulates_o_results_in_development_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the regulates relation with the results_in_development_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_development_of","secondary_identifiers":["GOREL:0001023"],"synonyms":[{"name":"regulates_o_results_in_development_of","type":"exact"}],"termid":"_global:regulates_o_results_in_development_of"}


id: PATO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deciduous (generic)","termid":"PATO:0001730"}


id: PBO:0038757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 2","termid":"PBO:0038757"}


id: MONDO:0003581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma arising from the ovary. Signs and symptoms include the presence of an abdominal mass and abdominal pain.","definition_xrefs":["NCIT:C8108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian embryonal carcinoma","secondary_identifiers":["UMLS:C0346183","MEDGEN:91090","DOID:5681","EFO:1000415","SCTID:254872007","ONCOTREE:OEC"],"synonyms":[{"name":"embryonal carcinoma","type":"related"},{"name":"embryonal carcinoma of ovary","type":"exact"},{"name":"embryonal carcinoma of the ovary","type":"exact"},{"name":"ovarian embryonal carcinoma","type":"exact"},{"name":"ovary embryonal carcinoma","type":"exact"}],"termid":"MONDO:0003581","xrefs":{"Monarch":{"xref_id":"0003581"}}}


id: FYPO:0000739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the occurrence of pigment accumulation in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"cellular pigment accumulation phenotype","synonyms":[{"name":"cellular pigment accumulation phenotype during mitotic cell cycle","type":"related"},{"name":"cellular pigment accumulation phenotype during vegetative growth","type":"exact"},{"name":"fission yeast cellular pigment accumulation phenotype","type":"exact"}],"termid":"FYPO:0000739"}


id: PBO:0068843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 81, pseudogene","termid":"PBO:0068843"}


id: GO:1901887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-hydroxybenzoyl-CoA.","definition_xrefs":["GOC:TermGenie","PMID:19757094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"2-hydroxybenzoyl-CoA metabolic process","termid":"GO:1901885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA biosynthetic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA anabolism","type":"exact"},{"name":"2-hydroxybenzoyl-CoA biosynthesis","type":"exact"},{"name":"2-hydroxybenzoyl-CoA formation","type":"exact"},{"name":"2-hydroxybenzoyl-CoA synthesis","type":"exact"}],"termid":"GO:1901887"}


id: PBO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_topoisomerase-DNA_adduct_level","termid":"PBO:0034497"}


id: PBO:0069133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 383, pseudogene","termid":"PBO:0069133"}


id: PBO:0051508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKE antisense RNA 1","termid":"PBO:0051508"}


id: PBO:0042625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 1B","termid":"PBO:0042625"}


id: PBO:0040893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1A pseudogene 2","termid":"PBO:0040893"}


